Guide to the Human Genome
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Name: CD151 Sequence: fasta or formatted (253aa) NCBI GI: 87159824
Description:

CD151 antigen

Referenced in:

Integrins

Other entries for this name:
alt mRNA [253aa] CD151 antigen
alt mRNA [253aa] CD151 antigen
alt mRNA [253aa] CD151 antigen
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         19           1
 C cysteine            5.9         15           2
 D aspartate           2.8          7           1
 E glutamate           5.5         14           1
 F phenylalanine       4.0         10           1
 G glycine             7.9         20           2
 H histidine           2.4          6           1
 I isoleucine          6.7         17           2
 K lysine              4.7         12           2
 L leucine            12.3         31           3
 M methionine          2.0          5           1
 N asparagine          3.2          8           2
 P proline             0.8          2           1
 Q glutamine           4.3         11           2
 R arginine            4.0         10           2
 S serine              4.3         11           1
 T threonine           7.1         18           2
 V valine              7.9         20           2
 W tryptophan          1.6          4           1
 Y tyrosine            5.1         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD151 antigen 
CD151                 1.000   CD151 antigen 
CD151                 1.000   CD151 antigen 
CD151                 1.000   CD151 antigen 
TSPAN11               0.557   tetraspanin 11 
TSPAN9                0.243   tetraspanin 9 
TSPAN4                0.237   tetraspanin 4 isoform a 
TSPAN4                0.237   tetraspanin 4 isoform a 
TSPAN4                0.237   tetraspanin 4 isoform a 
TSPAN4                0.237   tetraspanin 4 isoform a 
TSPAN4                0.237   tetraspanin 4 isoform a 
TSPAN4                0.237   tetraspanin 4 isoform a 
TSPAN6                0.229   transmembrane 4 superfamily member 6 
TSPAN7                0.217   tetraspanin 7 
TSPAN18               0.215   tetraspanin 18 isoform 2 
TSPAN3                0.209   transmembrane 4 superfamily member 8 isoform 1 
CD82                  0.209   CD82 antigen isoform 1 
CD63                  0.205   CD63 antigen isoform A 
CD9                   0.199   CD9 antigen 
CD63                  0.191   CD63 antigen isoform B 
TSPAN8                0.189   transmembrane 4 superfamily member 3 
TSPAN18               0.181   tetraspanin 18 isoform 1 
CD53                  0.173   CD53 antigen 
CD53                  0.173   CD53 antigen 
TSPAN2                0.165   tetraspan 2 
TSPAN17               0.163   transmembrane 4 superfamily member 17 isoform b [Hom...
TSPAN33               0.161   tetraspanin 33 
TSPAN17               0.161   transmembrane 4 superfamily member 17 isoform c [Hom...
TSPAN5                0.161   transmembrane 4 superfamily member 9 
TSPAN17               0.161   transmembrane 4 superfamily member 17 isoform a [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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