TSPAN1 12772

Name: TSPAN1	Sequence: fasta or formatted (241aa)		NCBI GI: 21264578
Description: tetraspan 1		Referenced in: Integrins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 25 3 C cysteine 4.6 11 2 D aspartate 3.3 8 1 E glutamate 3.7 9 1 F phenylalanine 9.1 22 3 G glycine 7.5 18 2 H histidine 0.8 2 1 I isoleucine 5.8 14 1 K lysine 5.0 12 2 L leucine 10.8 26 3 M methionine 3.3 8 2 N asparagine 5.0 12 1 P proline 2.1 5 2 Q glutamine 3.3 8 1 R arginine 0.4 1 1 S serine 4.6 11 3 T threonine 7.1 17 2 V valine 8.7 21 3 W tryptophan 0.8 2 1 Y tyrosine 3.7 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tetraspan 1 TSPAN18 0.244 tetraspanin 18 isoform 2 TSPAN18 0.220 tetraspanin 18 isoform 1 TSPAN9 0.194 tetraspanin 9 TSPAN4 0.188 tetraspanin 4 isoform a TSPAN4 0.188 tetraspanin 4 isoform a TSPAN4 0.188 tetraspanin 4 isoform a TSPAN4 0.188 tetraspanin 4 isoform a TSPAN4 0.188 tetraspanin 4 isoform a TSPAN4 0.188 tetraspanin 4 isoform a TSPAN11 0.177 tetraspanin 11 CD82 0.175 CD82 antigen isoform 1 TSPAN8 0.172 transmembrane 4 superfamily member 3 TSPAN7 0.172 tetraspanin 7 TSPAN6 0.166 transmembrane 4 superfamily member 6 TSPAN16 0.166 transmembrane 4 superfamily member 16 TSPAN3 0.162 transmembrane 4 superfamily member 8 isoform 1 CD53 0.162 CD53 antigen CD53 0.162 CD53 antigen CD37 0.151 CD37 antigen isoform A TSPAN2 0.144 tetraspan 2 CD151 0.142 CD151 antigen CD151 0.142 CD151 antigen CD151 0.142 CD151 antigen CD151 0.142 CD151 antigen CD63 0.138 CD63 antigen isoform A CD81 0.136 CD81 antigen TSPAN33 0.134 tetraspanin 33 CD63 0.131 CD63 antigen isoform B CD82 0.129 CD82 antigen isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.