Guide to the Human Genome
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Name: CD37 Sequence: fasta or formatted (281aa) NCBI GI: 4502663
Description:

CD37 antigen isoform A

Referenced in:

B cells
Integrins

Other entries for this name:
alt prot [213aa] CD37 antigen isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         17           2
 C cysteine            4.3         12           2
 D aspartate           2.8          8           1
 E glutamate           4.3         12           2
 F phenylalanine       6.4         18           3
 G glycine             7.5         21           1
 H histidine           2.5          7           1
 I isoleucine          7.8         22           1
 K lysine              2.8          8           1
 L leucine            16.0         45           4
 M methionine          1.4          4           1
 N asparagine          3.2          9           2
 P proline             2.1          6           1
 Q glutamine           4.6         13           1
 R arginine            5.3         15           1
 S serine              7.5         21           1
 T threonine           3.9         11           1
 V valine              6.0         17           2
 W tryptophan          2.1          6           1
 Y tyrosine            3.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD37 antigen isoform A 
CD37                  0.755   CD37 antigen isoform B 
CD82                  0.287   CD82 antigen isoform 1 
CD82                  0.232   CD82 antigen isoform 2 
TSPAN4                0.155   tetraspanin 4 isoform a 
TSPAN4                0.155   tetraspanin 4 isoform a 
TSPAN4                0.155   tetraspanin 4 isoform a 
TSPAN4                0.155   tetraspanin 4 isoform a 
TSPAN4                0.155   tetraspanin 4 isoform a 
TSPAN4                0.155   tetraspanin 4 isoform a 
TSPAN19               0.144   tetraspanin 19 
CD53                  0.137   CD53 antigen 
CD53                  0.137   CD53 antigen 
TSPAN11               0.135   tetraspanin 11 
TSPAN18               0.132   tetraspanin 18 isoform 2 
CD151                 0.132   CD151 antigen 
CD151                 0.132   CD151 antigen 
CD151                 0.132   CD151 antigen 
CD151                 0.132   CD151 antigen 
TSPAN9                0.130   tetraspanin 9 
TSPAN18               0.130   tetraspanin 18 isoform 1 
TSPAN1                0.128   tetraspan 1 
TSPAN14               0.126   tetraspanin 14 isoform 1 
TSPAN5                0.122   transmembrane 4 superfamily member 9 
TSPAN10               0.119   tetraspanin 10 
TSPAN8                0.117   transmembrane 4 superfamily member 3 
TSPAN33               0.115   tetraspanin 33 
TSPAN3                0.113   transmembrane 4 superfamily member 8 isoform 1 
TSPAN17               0.113   transmembrane 4 superfamily member 17 isoform c [Hom...
TSPAN17               0.113   transmembrane 4 superfamily member 17 isoform b [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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