Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 58761546
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58761546 amine oxidase (flavin containing) domain 2 isoform
b [Homo sapiens]
(852 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 1704 0.0
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 1686 0.0
gi|116256451 amine oxidase (flavin containing) domain 1 [Homo sa... 182 9e-46
gi|23097272 polyamine oxidase isoform 1 [Homo sapiens] 134 4e-31
gi|28559076 spermine oxidase isoform 2 [Homo sapiens] 128 2e-29
gi|28559074 spermine oxidase isoform 1 [Homo sapiens] 128 3e-29
gi|28559080 spermine oxidase isoform 4 [Homo sapiens] 120 7e-27
gi|38202207 monoamine oxidase B [Homo sapiens] 60 7e-09
gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo sa... 59 1e-08
gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens] 59 1e-08
gi|4557735 monoamine oxidase A [Homo sapiens] 59 2e-08
gi|28559078 spermine oxidase isoform 3 [Homo sapiens] 57 7e-08
gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens] 57 7e-08
gi|46397310 polyamine oxidase isoform 4 [Homo sapiens] 54 5e-07
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 54 8e-07
gi|133908631 SWI/SNF-related matrix-associated actin-dependent r... 49 3e-05
gi|133908629 SWI/SNF-related matrix-associated actin-dependent r... 49 3e-05
gi|124378039 SEC16 homolog A [Homo sapiens] 48 3e-05
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 48 4e-05
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 48 4e-05
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 48 4e-05
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 48 4e-05
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 48 4e-05
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 48 4e-05
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 47 6e-05
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 47 6e-05
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 47 6e-05
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 47 6e-05
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 47 6e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 47 1e-04
>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
[Homo sapiens]
Length = 852
Score = 1704 bits (4412), Expect = 0.0
Identities = 852/852 (100%), Positives = 852/852 (100%)
Query: 1 MLSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTP 60
MLSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTP
Sbjct: 1 MLSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTP 60
Query: 61 RKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEY 120
RKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEY
Sbjct: 61 RKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEY 120
Query: 121 REMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQ 180
REMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQ
Sbjct: 121 REMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQ 180
Query: 181 SRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEA 240
SRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEA
Sbjct: 181 SRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEA 240
Query: 241 PYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSF 300
PYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSF
Sbjct: 241 PYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSF 300
Query: 301 GMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKC 360
GMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKC
Sbjct: 301 GMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKC 360
Query: 361 PLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQE 420
PLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQE
Sbjct: 361 PLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQE 420
Query: 421 KHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLV 480
KHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLV
Sbjct: 421 KHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLV 480
Query: 481 KSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFAN 540
KSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFAN
Sbjct: 481 KSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFAN 540
Query: 541 ATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGC 600
ATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGC
Sbjct: 541 ATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGC 600
Query: 601 EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLN 660
EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLN
Sbjct: 601 EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLN 660
Query: 661 KVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISD 720
KVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISD
Sbjct: 661 KVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISD 720
Query: 721 DVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPI 780
DVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPI
Sbjct: 721 DVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPI 780
Query: 781 TPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQA 840
TPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQA
Sbjct: 781 TPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQA 840
Query: 841 TPGVPAQQSPSM 852
TPGVPAQQSPSM
Sbjct: 841 TPGVPAQQSPSM 852
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 1686 bits (4366), Expect = 0.0
Identities = 852/876 (97%), Positives = 852/876 (97%), Gaps = 24/876 (2%)
Query: 1 MLSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTP 60
MLSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTP
Sbjct: 1 MLSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTP 60
Query: 61 RKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEY 120
RKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEY
Sbjct: 61 RKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEY 120
Query: 121 REMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSG------- 173
REMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSG
Sbjct: 121 REMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGQAGGLQD 180
Query: 174 -------------VEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQL 220
VEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQL
Sbjct: 181 DSSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQL 240
Query: 221 WLDNPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGK 280
WLDNPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGK
Sbjct: 241 WLDNPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGK 300
Query: 281 VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGN 340
VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGN
Sbjct: 301 VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGN 360
Query: 341 PMAVVSKQVNMELAKIKQKCPLYEANGQA----VPKEKDEMVEQEFNRLLEATSYLSHQL 396
PMAVVSKQVNMELAKIKQKCPLYEANGQA VPKEKDEMVEQEFNRLLEATSYLSHQL
Sbjct: 361 PMAVVSKQVNMELAKIKQKCPLYEANGQADTVKVPKEKDEMVEQEFNRLLEATSYLSHQL 420
Query: 397 DFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIK 456
DFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIK
Sbjct: 421 DFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIK 480
Query: 457 ELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPP 516
ELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPP
Sbjct: 481 ELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPP 540
Query: 517 SDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPV 576
SDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPV
Sbjct: 541 SDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPV 600
Query: 577 ALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 636
ALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA
Sbjct: 601 ALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 660
Query: 637 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWN 696
VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWN
Sbjct: 661 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWN 720
Query: 697 LYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPW 756
LYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPW
Sbjct: 721 LYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPW 780
Query: 757 ARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALL 816
ARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALL
Sbjct: 781 ARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALL 840
Query: 817 SGLREAGRIADQFLGAMYTLPRQATPGVPAQQSPSM 852
SGLREAGRIADQFLGAMYTLPRQATPGVPAQQSPSM
Sbjct: 841 SGLREAGRIADQFLGAMYTLPRQATPGVPAQQSPSM 876
>gi|116256451 amine oxidase (flavin containing) domain 1 [Homo
sapiens]
Length = 590
Score = 182 bits (463), Expect = 9e-46
Identities = 109/287 (37%), Positives = 160/287 (55%), Gaps = 27/287 (9%)
Query: 547 LSLKHWDQDDDF-EFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAV 605
+S + WD ++ F +F G H + GYS + LAEGLDI+L + V+ + Y SG EV
Sbjct: 322 VSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPVQCIDY--SGDEVQVT 379
Query: 606 NTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLC 665
T T Y VL T+PL +L Q A+QF PPL E K A+ +G G + K+ L
Sbjct: 380 TTDGTG----YSAQKVLVTVPLALL--QKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQ 433
Query: 666 FDRVFWDPSV---NLFGHVGSTTASRGELFLFWNL---YKAPILLALVAGEAAGIMENIS 719
F FWD V + FGHV + + RG +F+++ K +L++++AGEA + +
Sbjct: 434 FPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLD 493
Query: 720 DDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQP 779
D ++ +C+A L+ +F VP P + V+RW DPW + +YS+V G SG YD++A+
Sbjct: 494 DKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAED 553
Query: 780 ITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIA 826
I +FFAGE T R++P TV GA LSG+REA +IA
Sbjct: 554 IQ------------GTVFFAGEATNRHFPQTVTGAYLSGVREASKIA 588
Score = 73.6 bits (179), Expect = 7e-13
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 249 VHRVHSYLERHGLINFGIYKRIKP---LPTKKTGK-VIIIGSGVSGLAAARQLQSFGMDV 304
V R+ ++ R GLIN G+ LP K VIIIG+G +GLAAARQL +FG+ V
Sbjct: 217 VERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKV 276
Query: 305 TLLEARDRVGGRVATFRKGNYV-ADLGAMVVTGLGGNPMAVVSKQVN 350
T+LEA+DR+GGRV + V GA +V G NP+A++ +QV+
Sbjct: 277 TVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQVS 323
>gi|23097272 polyamine oxidase isoform 1 [Homo sapiens]
Length = 511
Score = 134 bits (337), Expect = 4e-31
Identities = 82/220 (37%), Positives = 119/220 (54%), Gaps = 21/220 (9%)
Query: 621 VLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGH 680
V+ T+PLG L++ F PPLP K A++++GFG NK+ L F+ FW+P L
Sbjct: 283 VIVTVPLGFLREHLDTF-FDPPLPAEKAEAIRKIGFGTNNKIFLEFEEPFWEPDCQLIQL 341
Query: 681 VGSTTA----SRGELFLFW-----------NLYKAPILLALVAGEAAGIMENISDDVIVG 725
V T+ + EL W +L +AG + ME +SD+ ++
Sbjct: 342 VWEDTSPLEDAAPELQDAWFRKLIGFVVLPAFASVHVLCGFIAGLESEFMETLSDEEVLL 401
Query: 726 RCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPS 785
+L+ + G+ +P PK + SRW + P+ RGSYSYVA GS+G D DL+AQP+
Sbjct: 402 CLTQVLRRVTGNPRLPAPKSVLRSRWHSAPYTRGSYSYVAVGSTGGDLDLLAQPL----P 457
Query: 786 IPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRI 825
GA + ++ FAGE T R + +T HGALLSG REA R+
Sbjct: 458 ADGAGAQL-QILFAGEATHRTFYSTTHGALLSGWREADRL 496
Score = 40.4 bits (93), Expect = 0.007
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 280 KVIIIGSGVSGLAAARQL--QSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL 337
+V+++G G++GL AA++L S + +LEA R GGR+ + R V ++GA + G
Sbjct: 15 RVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCFGGVVEVGAHWIHGP 74
Query: 338 G-GNPMAVVSKQVNMELAK-IKQKCPLYEANG 367
GNP+ ++ + + K + Q+ L E G
Sbjct: 75 SRGNPVFQLAAEYGLLGEKELSQENQLVETGG 106
>gi|28559076 spermine oxidase isoform 2 [Homo sapiens]
Length = 502
Score = 128 bits (322), Expect = 2e-29
Identities = 107/384 (27%), Positives = 172/384 (44%), Gaps = 46/384 (11%)
Query: 471 PRDITAEFL-VKSKHRDLTALCKEYDEL--AETQGKL----EEKLQELEANPPSDVYLSS 523
P+D+ EF + ++ +LT +D+ AE+Q + E+++ N P D +
Sbjct: 132 PKDVVEEFSDLYNEVYNLTQEFFRHDKPVNAESQNSVGVFTREEVRNRIRNDPDDPEATK 191
Query: 524 RDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLD 583
R + + + +E ++ S + + E G+H + +G+ V LAEG+
Sbjct: 192 RLKLAMIQQYLKVESCESSSHSMDEVSLSAFGEWTEIPGAHHIIPSGFMRVVELLAEGIP 251
Query: 584 ---IKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFV 640
I+L VR + + + P GVLK+Q + F
Sbjct: 252 AHVIQLGKPVRCIHWDQASARPRGPEIE-----------------PRGVLKRQYTSF-FR 293
Query: 641 PPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFL------- 693
P LP K +A+ R+G G +K+ L F+ FW P N V A L
Sbjct: 294 PGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQFVWEDEAESHTLTYPPELWYR 353
Query: 694 ----FWNLYKAP----ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKE 745
F LY +L + GE A +ME D+ + C +L+ G+ +P+P+
Sbjct: 354 KICGFDVLYPPERYGHVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNIPKPRR 413
Query: 746 TVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIR 805
+ S W ++P+ RGSYSY GSSG D + +A+P+ S AP ++ F+GE T R
Sbjct: 414 ILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYTESSKTAPM---QVLFSGEATHR 470
Query: 806 NYPATVHGALLSGLREAGRIADQF 829
Y +T HGALLSG REA R+ + +
Sbjct: 471 KYYSTTHGALLSGQREAARLIEMY 494
Score = 58.9 bits (141), Expect = 2e-08
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 280 KVIIIGSGVSGLAAARQLQSFGM-DVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLG 338
+V++IG+G++GLAAA+ L G DVT+LEA +GGRV + + G+ +LGA + G
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSH 85
Query: 339 GNPMAVVSK-----QVNMELAKIKQKCPLYEANGQA---------VPKEKDEMVEQEFNR 384
GNP+ +++ + + + + LY NG A +PK+ E +N
Sbjct: 86 GNPIYHLAEANGLLEETTDGERSVGRISLYSKNGVACYLTNHGRRIPKDVVEEFSDLYNE 145
Query: 385 LLEAT-SYLSHQLDFNVLNNKPVSLGQALEV 414
+ T + H N + V + EV
Sbjct: 146 VYNLTQEFFRHDKPVNAESQNSVGVFTREEV 176
>gi|28559074 spermine oxidase isoform 1 [Homo sapiens]
Length = 555
Score = 128 bits (321), Expect = 3e-29
Identities = 80/226 (35%), Positives = 116/226 (51%), Gaps = 19/226 (8%)
Query: 619 DAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLF 678
D V+ T+ LGVLK+Q + F P LP K +A+ R+G G +K+ L F+ FW P N
Sbjct: 326 DHVIVTVSLGVLKRQYTSF-FRPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSL 384
Query: 679 GHVGSTTASRGELFL-----------FWNLYKAP----ILLALVAGEAAGIMENISDDVI 723
V A L F LY +L + GE A +ME D+ +
Sbjct: 385 QFVWEDEAESHTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMEKCDDEAV 444
Query: 724 VGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPG 783
C +L+ G+ +P+P+ + S W ++P+ RGSYSY GSSG D + +A+P+
Sbjct: 445 AEICTEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYT 504
Query: 784 PSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF 829
S AP ++ F+GE T R Y +T HGALLSG REA R+ + +
Sbjct: 505 ESSKTAPM---QVLFSGEATHRKYYSTTHGALLSGQREAARLIEMY 547
Score = 58.9 bits (141), Expect = 2e-08
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 280 KVIIIGSGVSGLAAARQLQSFGM-DVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLG 338
+V++IG+G++GLAAA+ L G DVT+LEA +GGRV + + G+ +LGA + G
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSH 85
Query: 339 GNPMAVVSK-----QVNMELAKIKQKCPLYEANGQA---------VPKEKDEMVEQEFNR 384
GNP+ +++ + + + + LY NG A +PK+ E +N
Sbjct: 86 GNPIYHLAEANGLLEETTDGERSVGRISLYSKNGVACYLTNHGRRIPKDVVEEFSDLYNE 145
Query: 385 LLEAT-SYLSHQLDFNVLNNKPVSLGQALEV 414
+ T + H N + V + EV
Sbjct: 146 VYNLTQEFFRHDKPVNAESQNSVGVFTREEV 176
>gi|28559080 spermine oxidase isoform 4 [Homo sapiens]
Length = 532
Score = 120 bits (300), Expect = 7e-27
Identities = 111/412 (26%), Positives = 178/412 (43%), Gaps = 72/412 (17%)
Query: 471 PRDITAEFL-VKSKHRDLTALCKEYDEL--AETQGKL----EEKLQELEANPPSDVYLSS 523
P+D+ EF + ++ +LT +D+ AE+Q + E+++ N P D +
Sbjct: 132 PKDVVEEFSDLYNEVYNLTQEFFRHDKPVNAESQNSVGVFTREEVRNRIRNDPDDPEATK 191
Query: 524 RDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLD 583
R + + + +E ++ S + + E G+H + +G+ V LAEG+
Sbjct: 192 RLKLAMIQQYLKVESCESSSHSMDEVSLSAFGEWTEIPGAHHIIPSGFMRVVELLAEGIP 251
Query: 584 ---IKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFV 640
I+L VR + + + P GVLK+Q + F
Sbjct: 252 AHVIQLGKPVRCIHWDQASARPRGPEIE-----------------PRGVLKRQYTSF-FR 293
Query: 641 PPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFL------- 693
P LP K +A+ R+G G +K+ L F+ FW P N V A L
Sbjct: 294 PGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQFVWEDEAESHTLTYPPELWYR 353
Query: 694 ----FWNLYKAP----ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKE 745
F LY +L + GE A +ME D+ + C +L+ G+ +P+P+
Sbjct: 354 KICGFDVLYPPERYGHVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNIPKPRR 413
Query: 746 TVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPI----------------TPG------ 783
+ S W ++P+ RGSYSY GSSG D + +A+P+ PG
Sbjct: 414 ILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYTESSKTAHGSSTKQQPGHLFSSK 473
Query: 784 -PSIP-----GAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF 829
P P GA +P+ ++ F+GE T R Y +T HGALLSG REA R+ + +
Sbjct: 474 CPEQPLDANRGAVKPM-QVLFSGEATHRKYYSTTHGALLSGQREAARLIEMY 524
Score = 58.9 bits (141), Expect = 2e-08
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 280 KVIIIGSGVSGLAAARQLQSFGM-DVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLG 338
+V++IG+G++GLAAA+ L G DVT+LEA +GGRV + + G+ +LGA + G
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSH 85
Query: 339 GNPMAVVSK-----QVNMELAKIKQKCPLYEANGQA---------VPKEKDEMVEQEFNR 384
GNP+ +++ + + + + LY NG A +PK+ E +N
Sbjct: 86 GNPIYHLAEANGLLEETTDGERSVGRISLYSKNGVACYLTNHGRRIPKDVVEEFSDLYNE 145
Query: 385 LLEAT-SYLSHQLDFNVLNNKPVSLGQALEV 414
+ T + H N + V + EV
Sbjct: 146 VYNLTQEFFRHDKPVNAESQNSVGVFTREEV 176
>gi|38202207 monoamine oxidase B [Homo sapiens]
Length = 520
Score = 60.5 bits (145), Expect = 7e-09
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 281 VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR--KGNYVADLGAMVVTGLG 338
V+++G G+SG+AAA+ L G++V +LEARDRVGGR T R K YV DLG V G
Sbjct: 7 VVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYV-DLGGSYV-GPT 64
Query: 339 GNPMAVVSKQVNMELAKIKQ-KCPLYEANGQAVP 371
N + ++K++ +E K+ + + ++ G++ P
Sbjct: 65 QNRILRLAKELGLETYKVNEVERLIHHVKGKSYP 98
Score = 41.2 bits (95), Expect = 0.004
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 39/237 (16%)
Query: 629 VLKQQPPA----VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGST 684
V+ PP + F PPLP + + R+ G++ K ++ + FW + G+
Sbjct: 260 VISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK----DYCGTM 315
Query: 685 TASRGELFLFWNLYK-------APILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGS 737
E + + L A I+ ++A +A + ++ + C K + GS
Sbjct: 316 IIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAK-VLGS 374
Query: 738 SAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLF 797
+P W + ++ G Y+ Y + + QP+ R++
Sbjct: 375 LEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLR------------QPVDRIY 422
Query: 798 FAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPR----QATP---GVPAQ 847
FAG T ++ + GA+ +G R A I L AM +P Q+ P VPAQ
Sbjct: 423 FAGTETATHWSGYMEGAVEAGERAAREI----LHAMGKIPEDEIWQSEPESVDVPAQ 475
>gi|23821023 interleukin 4 induced 1 isoform 1 precursor [Homo
sapiens]
Length = 567
Score = 59.3 bits (142), Expect = 1e-08
Identities = 30/74 (40%), Positives = 50/74 (67%), Gaps = 8/74 (10%)
Query: 261 LINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATF 320
++ +G+ + +KP +VI++G+GV+GL AA+ L G VT+LEA +R+GGR+ T+
Sbjct: 48 VVTWGLNRTLKPQ------RVIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFTY 101
Query: 321 RKGN--YVADLGAM 332
R N ++ +LGAM
Sbjct: 102 RDQNTGWIGELGAM 115
Score = 48.5 bits (114), Expect = 3e-05
Identities = 66/260 (25%), Positives = 98/260 (37%), Gaps = 24/260 (9%)
Query: 570 GYSCVPVALAEGLD--IKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPL 627
G+ +P AL L + LN V + V + + K D VL T
Sbjct: 265 GWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSPPARNLKVLKADVVLLTASG 324
Query: 628 GVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTAS 687
+K+ + F PPLP A++R+ + KV L F R FW GH + S
Sbjct: 325 PAVKR----ITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWREEHIEGGHSNTDRPS 380
Query: 688 RGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKET- 746
R +F A +L + +AA +S + + L + + G T
Sbjct: 381 R-MIFYPPPREGALLLASYTWSDAAAAFAGLSREEALRLALDDVAALHGPVVRQLWDGTG 439
Query: 747 VVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRN 806
VV RW D ++G + ++ P P R++FAGEHT
Sbjct: 440 VVKRWAEDQHSQGGF-------------VVQPPALWQTEKDDWTVPYGRIYFAGEHTA-- 484
Query: 807 YP-ATVHGALLSGLREAGRI 825
YP V A+ S LR A +I
Sbjct: 485 YPHGWVETAVKSALRAAIKI 504
>gi|27477089 interleukin 4 induced 1 isoform 2 [Homo sapiens]
Length = 589
Score = 59.3 bits (142), Expect = 1e-08
Identities = 30/74 (40%), Positives = 50/74 (67%), Gaps = 8/74 (10%)
Query: 261 LINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATF 320
++ +G+ + +KP +VI++G+GV+GL AA+ L G VT+LEA +R+GGR+ T+
Sbjct: 70 VVTWGLNRTLKPQ------RVIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFTY 123
Query: 321 RKGN--YVADLGAM 332
R N ++ +LGAM
Sbjct: 124 RDQNTGWIGELGAM 137
Score = 48.5 bits (114), Expect = 3e-05
Identities = 66/260 (25%), Positives = 98/260 (37%), Gaps = 24/260 (9%)
Query: 570 GYSCVPVALAEGLD--IKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPL 627
G+ +P AL L + LN V + V + + K D VL T
Sbjct: 287 GWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSPPARNLKVLKADVVLLTASG 346
Query: 628 GVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTAS 687
+K+ + F PPLP A++R+ + KV L F R FW GH + S
Sbjct: 347 PAVKR----ITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWREEHIEGGHSNTDRPS 402
Query: 688 RGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKET- 746
R +F A +L + +AA +S + + L + + G T
Sbjct: 403 R-MIFYPPPREGALLLASYTWSDAAAAFAGLSREEALRLALDDVAALHGPVVRQLWDGTG 461
Query: 747 VVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRN 806
VV RW D ++G + ++ P P R++FAGEHT
Sbjct: 462 VVKRWAEDQHSQGGF-------------VVQPPALWQTEKDDWTVPYGRIYFAGEHTA-- 506
Query: 807 YP-ATVHGALLSGLREAGRI 825
YP V A+ S LR A +I
Sbjct: 507 YPHGWVETAVKSALRAAIKI 526
>gi|4557735 monoamine oxidase A [Homo sapiens]
Length = 527
Score = 58.5 bits (140), Expect = 2e-08
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 23/170 (13%)
Query: 281 VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKG--NYVADLGAMVVTGLG 338
V++IG G+SGL+AA+ L +G+ V +LEARDRVGGR T R +YV GA V G
Sbjct: 16 VVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHVDYVDVGGAYV--GPT 73
Query: 339 GNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDF 398
N + +SK++ +E K+ L + K K F + +Y LD+
Sbjct: 74 QNRILRLSKELGIETYKVNVSERLVQ-----YVKGKTYPFRGAFPPVWNPIAY----LDY 124
Query: 399 NVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKM 448
N L ++G+ + + +H + W K+ +KEL++K+
Sbjct: 125 NNLWRTIDNMGKEIPTDAPWEAQHA-----DKWDKMT-----MKELIDKI 164
Score = 43.1 bits (100), Expect = 0.001
Identities = 45/251 (17%), Positives = 89/251 (35%), Gaps = 32/251 (12%)
Query: 581 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFV 640
G +KLN V V ++ + +N Y+C V+ +P + + + F
Sbjct: 235 GDQVKLNHPVTHVDQSSDNIIIETLNHEH------YECKYVINAIPPTLTAK----IHFR 284
Query: 641 PPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNL--- 697
P LP + +QR+ G + K ++ + FW + G + + L
Sbjct: 285 PELPAERNQLIQRLPMGAVIKCMMYYKEAFWKKK----DYCGCMIIEDEDAPISITLDDT 340
Query: 698 ---YKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRAD 754
P ++ + A + + ++ + + + GS P W +
Sbjct: 341 KPDGSLPAIMGFILARKADRLAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEE 400
Query: 755 PWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGA 814
++ G Y+ Y + + QP+ R+FFAG T + + GA
Sbjct: 401 QYSGGCYTAYFPPGIMTQYGRVIR------------QPVGRIFFAGTETATKWSGYMEGA 448
Query: 815 LLSGLREAGRI 825
+ +G R A +
Sbjct: 449 VEAGERAAREV 459
>gi|28559078 spermine oxidase isoform 3 [Homo sapiens]
Length = 190
Score = 57.0 bits (136), Expect = 7e-08
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 280 KVIIIGSGVSGLAAARQLQSFGM-DVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLG 338
+V++IG+G++GLAAA+ L G DVT+LEA +GGRV + + G+ +LGA + G
Sbjct: 26 RVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSHIGGRVQSVKLGHATFELGATWIHGSH 85
Query: 339 GNPM 342
GNP+
Sbjct: 86 GNPI 89
Score = 40.8 bits (94), Expect = 0.005
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 795 RLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF 829
++ F+GE T R Y +T HGALLSG REA R+ + +
Sbjct: 148 QVLFSGEATHRKYYSTTHGALLSGQREAARLIEMY 182
>gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]
Length = 306
Score = 57.0 bits (136), Expect = 7e-08
Identities = 53/177 (29%), Positives = 68/177 (38%), Gaps = 25/177 (14%)
Query: 7 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGER-------- 58
AAAAAAAAA AA G +GPG G+ A G + G G E
Sbjct: 3 AAAAAAAAAGAAGGRGSGPGRRRHLVPGAGGEAGEGAPGGAGDYGNGLESEELEPEELLL 62
Query: 59 TPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR---RTSRRKR 115
P + P PP A PPG+ GP G E G+ E G +
Sbjct: 63 EPEPEPEPEEEPPRPRA-PPGAPGPGPGSGAPGSQEEEEEPGLVEGDPGDGAIEDPELEA 121
Query: 116 AKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPP-----EEENESE 167
K REM+E L +E + EK+ + PPP A P EE+ E++
Sbjct: 122 IKARVREMEEEAEKL--------KELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEAD 170
>gi|46397310 polyamine oxidase isoform 4 [Homo sapiens]
Length = 486
Score = 54.3 bits (129), Expect = 5e-07
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 621 VLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGH 680
V+ T+PLG L++ F PPLP K A++++GFG NK+ L F+ FW+P L
Sbjct: 283 VIVTVPLGFLREHLDTF-FDPPLPAEKAEAIRKIGFGTNNKIFLEFEEPFWEPDCQLIQL 341
Query: 681 VGSTTA----SRGELFLFW-----------NLYKAPILLALVAGEAAGIMENISDDVIV 724
V T+ + EL W +L +AG + ME +SD+ ++
Sbjct: 342 VWEDTSPLEDAAPELQDAWFRKLIGFVVLPAFASVHVLCGFIAGLESEFMETLSDEEVL 400
Score = 40.4 bits (93), Expect = 0.007
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 280 KVIIIGSGVSGLAAARQL--QSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL 337
+V+++G G++GL AA++L S + +LEA R GGR+ + R V ++GA + G
Sbjct: 15 RVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATARAGGRIRSERCFGGVVEVGAHWIHGP 74
Query: 338 G-GNPMAVVSKQVNMELAK-IKQKCPLYEANG 367
GNP+ ++ + + K + Q+ L E G
Sbjct: 75 SRGNPVFQLAAEYGLLGEKELSQENQLVETGG 106
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 53.5 bits (127), Expect = 8e-07
Identities = 112/564 (19%), Positives = 221/564 (39%), Gaps = 79/564 (14%)
Query: 9 AAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPRKKEPPRA 68
+AA+ + + E P E G E +Q E+GPG P +K
Sbjct: 514 SAASLSLQLSLQREQAPSPPAACEKGKEQHSQAE------ELGPGQEEAEDPEEKVAVSP 567
Query: 69 SPPGGLAEPPGSAGPQAGPTVVPGSATP-METGIAETPEGRRTSRRKRAKVEYREMDESL 127
+PP ++ S P A P + +A ME +A+ E + + + + +++ E L
Sbjct: 568 TPP--VSPEVRSTEPVAPPEQLSEAALKAMEEAVAQVLEQDQRHLLESKQEKMQQLREKL 625
Query: 128 ANLSEDEY---YSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQ---- 180
E+E + ++E++ + +E+ +A EEE EE + Q
Sbjct: 626 CQEEEEEILRLHQQKEQSLSSLRERL-----QKAIEEEEARMREEESQRLSWLRAQVQSS 680
Query: 181 SRLPHDRMTSQEAACFPDI---ISGPQQTQKVFLFIRNRTLQLWLD-------------- 223
++ D++ +++ A + + Q+ ++ L +NR + L
Sbjct: 681 TQADEDQIRAEQEASLQKLREELESQQKAERASLEQKNRQMLEQLKEEIEASEKSEQAAL 740
Query: 224 NPKIQLTFEATLQQLEAPYNSDTVLVHRVHSY-LERHGLINFGIYKRIKPLPTKKTGKVI 282
N + + +QLE + + HS LER L K
Sbjct: 741 NAAKEKALQQLREQLEGERKEAVATLEKEHSAELER----------LCSSLEAKHRE--- 787
Query: 283 IIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPM 342
++ S + A+Q + + L + RV + ++ Y +L +++
Sbjct: 788 VVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQK--SYHVAGYEHELSSLLR-------- 837
Query: 343 AVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLN 402
K+ +E ++ + E + Q + K +++ +E + E +L+ +L+
Sbjct: 838 ---EKRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRA 894
Query: 403 NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQY 462
++ + LE V Q Q K ++D + H ++ K Q+ +L + ++K ++ L Q
Sbjct: 895 HE-----RELETVRQEQHKRLEDLRRRHREQERKLQDLELDLETRAKDVKARLALLEVQE 949
Query: 463 KEASEVKPPR-DITAEFLVKSK-----HRDLTALCKEYDELAETQGKLEEKLQELEANP- 515
+ A K D+ + +KS+ H+ L KE+ L ++ +L E L EL+A
Sbjct: 950 ETARREKQQLLDVQRQVALKSEEATATHQQLEEAQKEHTHLLQSNQQLREILDELQARKL 1009
Query: 516 --PSDVYLSSRDRQILDWHFANLE 537
S V L Q L HF++LE
Sbjct: 1010 KLESQVDLLQAQSQQLQKHFSSLE 1033
>gi|133908631 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d1 isoform b [Homo sapiens]
Length = 474
Score = 48.5 bits (114), Expect = 3e-05
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 11 AAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSG-PAEVGPGAVGERTPRKKEPPRAS 69
AA A + G G +GG+ G+ A P G G P +GP A G+ R P A
Sbjct: 2 AARAGFQSVAPSGGAGASGGA--GAAAALGPGGTPGPPVRMGP-APGQGLYRSPMPGAAY 58
Query: 70 PPGGLAEPPGSAGPQAGPTVVP---GSATPMETGIAETPEGRRTSRRKRAKVEYREMDES 126
P G+ PGS GP++ P G + G+A++ G SR++ A + +++ +
Sbjct: 59 PRPGML--PGSRMTPQGPSMGPPGYGGNPSVRPGLAQS--GMDQSRKRPAPQQIQQVQQQ 114
Query: 127 LANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRLPHD 186
+ + RN A+K+K + P+ E PE + ++ AF+ +L D
Sbjct: 115 ----------AVQNRNHNAKKKKM----ADKILPQRIRELVPESQAYMDLLAFERKL--D 158
Query: 187 RMTSQEAACFPDIISGP-QQTQKVFLFIRN 215
+ ++ + + P +Q +K+ +FI N
Sbjct: 159 QTIMRKRLDIQEALKRPIKQKRKLRIFISN 188
>gi|133908629 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d1 isoform a [Homo sapiens]
Length = 515
Score = 48.5 bits (114), Expect = 3e-05
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 11 AAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSG-PAEVGPGAVGERTPRKKEPPRAS 69
AA A + G G +GG+ G+ A P G G P +GP A G+ R P A
Sbjct: 2 AARAGFQSVAPSGGAGASGGA--GAAAALGPGGTPGPPVRMGP-APGQGLYRSPMPGAAY 58
Query: 70 PPGGLAEPPGSAGPQAGPTVVP---GSATPMETGIAETPEGRRTSRRKRAKVEYREMDES 126
P G+ PGS GP++ P G + G+A++ G SR++ A + +++ +
Sbjct: 59 PRPGML--PGSRMTPQGPSMGPPGYGGNPSVRPGLAQS--GMDQSRKRPAPQQIQQVQQQ 114
Query: 127 LANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRLPHD 186
+ + RN A+K+K + P+ E PE + ++ AF+ +L D
Sbjct: 115 ----------AVQNRNHNAKKKKM----ADKILPQRIRELVPESQAYMDLLAFERKL--D 158
Query: 187 RMTSQEAACFPDIISGP-QQTQKVFLFIRN 215
+ ++ + + P +Q +K+ +FI N
Sbjct: 159 QTIMRKRLDIQEALKRPIKQKRKLRIFISN 188
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 48.1 bits (113), Expect = 3e-05
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 53 GAVGERTPRKKEPPRASPPG------GLAEPPGSAGPQAGPTVVPGSATPMETGIAETPE 106
G TP + P +PPG G +PP S P A T PG A ET E +
Sbjct: 2048 GKFANLTPSRTVPDSEAPPGWDRADSGPTQPPLSLSP-APETKRPGQAAKKET--KEPKK 2104
Query: 107 GRRTSRR---KRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEE 163
G R + K E D+ ++ DE ++ + E+EKK PPPPP + P+
Sbjct: 2105 GESWFFRWLPGKKKTEAYLPDDKNKSIVWDEKKNQWVNLNEPEEEKKAPPPPPTSMPKTV 2164
Query: 164 NESEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQK 208
+ P P G GA + R + A + D+++ P TQ+
Sbjct: 2165 QAAPPALP-GPPGAPVNM---YSRRAAGTRARYVDVLN-PSGTQR 2204
Score = 30.0 bits (66), Expect = 9.5
Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 39/188 (20%)
Query: 53 GAVGERTPRKKE--PPRASP---PGGLAEPPGSAGPQAGPTVVP---------------G 92
G V E R+K+ P A P PG L +PP + P V P
Sbjct: 633 GEVRETCVRQKQCRPAAALPDASPGNLEQPPDNMETLCAPQVCPLPLNSTTEAVHMLPHA 692
Query: 93 SATPMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKL- 151
A P++T + PE +R S R + V+ +L SE + A A +
Sbjct: 693 GAPPLDT-VYPAPE-KRPSARTQGPVKCESPATTLWAQSELPDFGGNVLLAPAAPALYVC 750
Query: 152 --PPPPPQAPPEE---------ENESEPEEPSGVEGAAFQSRLP-----HDRMTSQEAAC 195
P PP PPEE + + P + G GA+ P + + SQ ++
Sbjct: 751 AKPQPPVVQPPEEAMSGQQSRNPSSAAPVQSRGGIGASENLENPPKMGEEEALQSQASSG 810
Query: 196 FPDIISGP 203
+ ++S P
Sbjct: 811 YASLLSSP 818
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 47.8 bits (112), Expect = 4e-05
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 342 MAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVL 401
+ V +++N+ ++ E N + V + ++++VE+E +++ ++ +
Sbjct: 528 LRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYC 587
Query: 402 NNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQ---------EELKELLNKMVN-L 451
+ V E ++ E+I K +K+Q E++KE +N+M++ L
Sbjct: 588 S---VIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDEL 644
Query: 452 KEKIKELHQQYKEAS-------EVKPPRDITAEFLVKSKHRDLTAL-----CKEYDELAE 499
+++ EL Q YKEA + K D+TAE++ K++H L L K D L+E
Sbjct: 645 NKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSE 704
Query: 500 TQGKLEEKLQEL 511
+ + + L EL
Sbjct: 705 MKSQYSKVLNEL 716
Score = 32.0 bits (71), Expect = 2.5
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 347 KQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFN----RLLEATSYLSHQLDFNVLN 402
K+ EL +++ L + + + K + E + Q N + +A S + Q VLN
Sbjct: 656 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYS-KVLN 714
Query: 403 NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKI--KELHQ 460
L Q ++V +E V EH + I + KE+ K+ NLKE + KE+
Sbjct: 715 E----LTQLKQLVDAQKENSVSIT--EHLQVITTLRTAAKEMEEKISNLKEHLASKEVEV 768
Query: 461 QYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVY 520
E ++ +T + +S + L + + E++ KL+E ++E E V
Sbjct: 769 AKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQ 826
Query: 521 LSSRDRQI 528
+ S Q+
Sbjct: 827 IRSEVSQV 834
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 47.8 bits (112), Expect = 4e-05
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 342 MAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVL 401
+ V +++N+ ++ E N + V + ++++VE+E +++ ++ +
Sbjct: 517 LRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYC 576
Query: 402 NNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQ---------EELKELLNKMVN-L 451
+ V E ++ E+I K +K+Q E++KE +N+M++ L
Sbjct: 577 S---VIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDEL 633
Query: 452 KEKIKELHQQYKEAS-------EVKPPRDITAEFLVKSKHRDLTAL-----CKEYDELAE 499
+++ EL Q YKEA + K D+TAE++ K++H L L K D L+E
Sbjct: 634 NKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSE 693
Query: 500 TQGKLEEKLQEL 511
+ + + L EL
Sbjct: 694 MKSQYSKVLNEL 705
Score = 32.0 bits (71), Expect = 2.5
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 347 KQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFN----RLLEATSYLSHQLDFNVLN 402
K+ EL +++ L + + + K + E + Q N + +A S + Q VLN
Sbjct: 645 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYS-KVLN 703
Query: 403 NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKI--KELHQ 460
L Q ++V +E V EH + I + KE+ K+ NLKE + KE+
Sbjct: 704 E----LTQLKQLVDAQKENSVSIT--EHLQVITTLRTAAKEMEEKISNLKEHLASKEVEV 757
Query: 461 QYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVY 520
E ++ +T + +S + L + + E++ KL+E ++E E V
Sbjct: 758 AKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQ 815
Query: 521 LSSRDRQI 528
+ S Q+
Sbjct: 816 IRSEVSQV 823
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 47.8 bits (112), Expect = 4e-05
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 342 MAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVL 401
+ V +++N+ ++ E N + V + ++++VE+E +++ ++ +
Sbjct: 496 LRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYC 555
Query: 402 NNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQ---------EELKELLNKMVN-L 451
+ V E ++ E+I K +K+Q E++KE +N+M++ L
Sbjct: 556 S---VIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDEL 612
Query: 452 KEKIKELHQQYKEAS-------EVKPPRDITAEFLVKSKHRDLTAL-----CKEYDELAE 499
+++ EL Q YKEA + K D+TAE++ K++H L L K D L+E
Sbjct: 613 NKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSE 672
Query: 500 TQGKLEEKLQEL 511
+ + + L EL
Sbjct: 673 MKSQYSKVLNEL 684
Score = 32.0 bits (71), Expect = 2.5
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 347 KQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFN----RLLEATSYLSHQLDFNVLN 402
K+ EL +++ L + + + K + E + Q N + +A S + Q VLN
Sbjct: 624 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYS-KVLN 682
Query: 403 NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKI--KELHQ 460
L Q ++V +E V EH + I + KE+ K+ NLKE + KE+
Sbjct: 683 E----LTQLKQLVDAQKENSVSIT--EHLQVITTLRTAAKEMEEKISNLKEHLASKEVEV 736
Query: 461 QYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVY 520
E ++ +T + +S + L + + E++ KL+E ++E E V
Sbjct: 737 AKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQ 794
Query: 521 LSSRDRQI 528
+ S Q+
Sbjct: 795 IRSEVSQV 802
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 47.8 bits (112), Expect = 4e-05
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 342 MAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVL 401
+ V +++N+ ++ E N + V + ++++VE+E +++ ++ +
Sbjct: 525 LRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYC 584
Query: 402 NNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQ---------EELKELLNKMVN-L 451
+ V E ++ E+I K +K+Q E++KE +N+M++ L
Sbjct: 585 S---VIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDEL 641
Query: 452 KEKIKELHQQYKEAS-------EVKPPRDITAEFLVKSKHRDLTAL-----CKEYDELAE 499
+++ EL Q YKEA + K D+TAE++ K++H L L K D L+E
Sbjct: 642 NKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSE 701
Query: 500 TQGKLEEKLQEL 511
+ + + L EL
Sbjct: 702 MKSQYSKVLNEL 713
Score = 32.0 bits (71), Expect = 2.5
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 347 KQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFN----RLLEATSYLSHQLDFNVLN 402
K+ EL +++ L + + + K + E + Q N + +A S + Q VLN
Sbjct: 653 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYS-KVLN 711
Query: 403 NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKI--KELHQ 460
L Q ++V +E V EH + I + KE+ K+ NLKE + KE+
Sbjct: 712 E----LTQLKQLVDAQKENSVSIT--EHLQVITTLRTAAKEMEEKISNLKEHLASKEVEV 765
Query: 461 QYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVY 520
E ++ +T + +S + L + + E++ KL+E ++E E V
Sbjct: 766 AKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQ 823
Query: 521 LSSRDRQI 528
+ S Q+
Sbjct: 824 IRSEVSQV 831
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 47.8 bits (112), Expect = 4e-05
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 342 MAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVL 401
+ V +++N+ ++ E N + V + ++++VE+E +++ ++ +
Sbjct: 525 LRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYC 584
Query: 402 NNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQ---------EELKELLNKMVN-L 451
+ V E ++ E+I K +K+Q E++KE +N+M++ L
Sbjct: 585 S---VIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDEL 641
Query: 452 KEKIKELHQQYKEAS-------EVKPPRDITAEFLVKSKHRDLTAL-----CKEYDELAE 499
+++ EL Q YKEA + K D+TAE++ K++H L L K D L+E
Sbjct: 642 NKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSE 701
Query: 500 TQGKLEEKLQEL 511
+ + + L EL
Sbjct: 702 MKSQYSKVLNEL 713
Score = 32.0 bits (71), Expect = 2.5
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 347 KQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFN----RLLEATSYLSHQLDFNVLN 402
K+ EL +++ L + + + K + E + Q N + +A S + Q VLN
Sbjct: 653 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYS-KVLN 711
Query: 403 NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKI--KELHQ 460
L Q ++V +E V EH + I + KE+ K+ NLKE + KE+
Sbjct: 712 E----LTQLKQLVDAQKENSVSIT--EHLQVITTLRTAAKEMEEKISNLKEHLASKEVEV 765
Query: 461 QYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVY 520
E ++ +T + +S + L + + E++ KL+E ++E E V
Sbjct: 766 AKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQ 823
Query: 521 LSSRDRQI 528
+ S Q+
Sbjct: 824 IRSEVSQV 831
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 47.8 bits (112), Expect = 4e-05
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 342 MAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVL 401
+ V +++N+ ++ E N + V + ++++VE+E +++ ++ +
Sbjct: 525 LRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYC 584
Query: 402 NNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQ---------EELKELLNKMVN-L 451
+ V E ++ E+I K +K+Q E++KE +N+M++ L
Sbjct: 585 S---VIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDEL 641
Query: 452 KEKIKELHQQYKEAS-------EVKPPRDITAEFLVKSKHRDLTAL-----CKEYDELAE 499
+++ EL Q YKEA + K D+TAE++ K++H L L K D L+E
Sbjct: 642 NKQVSELSQLYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSE 701
Query: 500 TQGKLEEKLQEL 511
+ + + L EL
Sbjct: 702 MKSQYSKVLNEL 713
Score = 32.0 bits (71), Expect = 2.5
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 347 KQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFN----RLLEATSYLSHQLDFNVLN 402
K+ EL +++ L + + + K + E + Q N + +A S + Q VLN
Sbjct: 653 KEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYS-KVLN 711
Query: 403 NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKI--KELHQ 460
L Q ++V +E V EH + I + KE+ K+ NLKE + KE+
Sbjct: 712 E----LTQLKQLVDAQKENSVSIT--EHLQVITTLRTAAKEMEEKISNLKEHLASKEVEV 765
Query: 461 QYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVY 520
E ++ +T + +S + L + + E++ KL+E ++E E V
Sbjct: 766 AKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLE--SEVSVLASKLKESVKEKEKVHSEVVQ 823
Query: 521 LSSRDRQI 528
+ S Q+
Sbjct: 824 IRSEVSQV 831
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 47.4 bits (111), Expect = 6e-05
Identities = 48/193 (24%), Positives = 68/193 (35%), Gaps = 24/193 (12%)
Query: 41 PAGLSGP--AEVGPGAVGERTPRKKEPPRA-SPPGGLAEPPGSAGPQAGPTVVP------ 91
P+G + P A GP P K+EP + PG L PP P GP +P
Sbjct: 803 PSGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVP 862
Query: 92 ------GSATPMETGIA--------ETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYS 137
G +E + E E + + E E D E+EY+
Sbjct: 863 EGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFE 922
Query: 138 EEERNAKA-EKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRLPHDRMTSQEAACF 196
EEE + E+E + + EEE+E E EE VE F + +
Sbjct: 923 EEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTL 982
Query: 197 PDIISGPQQTQKV 209
P + P+ KV
Sbjct: 983 PPALPPPESPPKV 995
Score = 38.9 bits (89), Expect = 0.020
Identities = 53/188 (28%), Positives = 70/188 (37%), Gaps = 37/188 (19%)
Query: 26 GTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPRKKEPPRASPPGGL--AEPPGSA-- 81
GTAGG E A P P + P +P K +P PG L E PG+
Sbjct: 966 GTAGGEV---EEGAPP-----PPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEE 1017
Query: 82 -GPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEE 140
G PT+ P A P + + E + VE E + L E+E E+
Sbjct: 1018 RGADTAPTLAP-EALPSQGEVEREGESPAAGPPPQELVE--EEPSAPPTLLEEE---TED 1071
Query: 141 RNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDII 200
+ K + PPP+ P EEE E+E E A Q + D AA D I
Sbjct: 1072 GSDKVQ-------PPPETPAEEEMETE------TEAEALQEKEQDD-----TAAMLADFI 1113
Query: 201 SGPQQTQK 208
P +K
Sbjct: 1114 DCPPDDEK 1121
Score = 30.0 bits (66), Expect = 9.5
Identities = 48/179 (26%), Positives = 62/179 (34%), Gaps = 9/179 (5%)
Query: 32 ENGSEVAAQPAGLSGPAEVGPGAVGERTPRKKEPPRASPPGGLAEPPGSAGPQAGPTV-V 90
E EV G +G EV GA T PP SPP EP P+ G + V
Sbjct: 955 EELEEVEDLEFGTAG-GEVEEGAPPPPTLPPALPPPESPPKVQPEPE----PEPGLLLEV 1009
Query: 91 PGSATPMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKA--EKE 148
T E G P + + +VE RE + A E EE E+E
Sbjct: 1010 EEPGTEEERGADTAPTLAPEALPSQGEVE-REGESPAAGPPPQELVEEEPSAPPTLLEEE 1068
Query: 149 KKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQ 207
+ Q PPE E E E + E + + M + C PD P T+
Sbjct: 1069 TEDGSDKVQPPPETPAEEEMETETEAEALQEKEQDDTAAMLADFIDCPPDDEKPPPPTE 1127
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 47.4 bits (111), Expect = 6e-05
Identities = 53/216 (24%), Positives = 84/216 (38%), Gaps = 28/216 (12%)
Query: 7 AAAAAAAAAAAATGTE-------AGPGTAGGSENGSEVAAQPAGLSGPAEVG---PGAVG 56
AAAAAAAAAAA+ G + PG++GG G +A P S ++G P G
Sbjct: 339 AAAAAAAAAAASGGAQQRSHHAPMSPGSSGG--GGQPLARTPQPSSPMDQMGKMRPQPYG 396
Query: 57 ERTPRKKEPPRASPP----GGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSR 112
P ++ S P G +P GS PQ P + G A G++ T
Sbjct: 397 GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYT-------- 448
Query: 113 RKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAP---PEEENESEPE 169
++ ++ + YY+++ + + ++ PP Q P P + + + +
Sbjct: 449 -QQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQ 507
Query: 170 EPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQ 205
P S+ P Q A +P S QQ
Sbjct: 508 PPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQ 543
Score = 33.5 bits (75), Expect = 0.86
Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Query: 2 LSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPR 61
LS + + AAAAA +A S + S A Q G G GP A G TP+
Sbjct: 231 LSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGG--GPSAAGGGTPQ 288
Query: 62 KKEPPRASPP-GGLAEPPGSAGPQAGPTVVPGSATPMETGIAETP 105
P A+P L P SA G S P + G + P
Sbjct: 289 ----PTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGP 329
Score = 32.7 bits (73), Expect = 1.5
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 4 GKKAAAAAA-------AAAAAATGTEAGPGTAGGSE--NGSEVAAQPAGLSGPAEVGPGA 54
G+ AAAAAA AA + G GP G E +G+E G + GPGA
Sbjct: 37 GEAAAAAAAERGEMKAAAGQESEGPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGA 96
Query: 55 VGE-RTPRKKEPPRASPPGGLAEPPGSAG 82
+ + PR + L EPPG G
Sbjct: 97 EPDLKNSNGNAGPRPALNNNLTEPPGGGG 125
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 47.4 bits (111), Expect = 6e-05
Identities = 53/216 (24%), Positives = 84/216 (38%), Gaps = 28/216 (12%)
Query: 7 AAAAAAAAAAAATGTE-------AGPGTAGGSENGSEVAAQPAGLSGPAEVG---PGAVG 56
AAAAAAAAAAA+ G + PG++GG G +A P S ++G P G
Sbjct: 339 AAAAAAAAAAASGGAQQRSHHAPMSPGSSGG--GGQPLARTPQPSSPMDQMGKMRPQPYG 396
Query: 57 ERTPRKKEPPRASPP----GGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSR 112
P ++ S P G +P GS PQ P + G A G++ T
Sbjct: 397 GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYT-------- 448
Query: 113 RKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAP---PEEENESEPE 169
++ ++ + YY+++ + + ++ PP Q P P + + + +
Sbjct: 449 -QQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQ 507
Query: 170 EPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQ 205
P S+ P Q A +P S QQ
Sbjct: 508 PPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQ 543
Score = 33.5 bits (75), Expect = 0.86
Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Query: 2 LSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPR 61
LS + + AAAAA +A S + S A Q G G GP A G TP+
Sbjct: 231 LSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGG--GPSAAGGGTPQ 288
Query: 62 KKEPPRASPP-GGLAEPPGSAGPQAGPTVVPGSATPMETGIAETP 105
P A+P L P SA G S P + G + P
Sbjct: 289 ----PTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGP 329
Score = 32.7 bits (73), Expect = 1.5
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 4 GKKAAAAAA-------AAAAAATGTEAGPGTAGGSE--NGSEVAAQPAGLSGPAEVGPGA 54
G+ AAAAAA AA + G GP G E +G+E G + GPGA
Sbjct: 37 GEAAAAAAAERGEMKAAAGQESEGPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGA 96
Query: 55 VGE-RTPRKKEPPRASPPGGLAEPPGSAG 82
+ + PR + L EPPG G
Sbjct: 97 EPDLKNSNGNAGPRPALNNNLTEPPGGGG 125
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 47.4 bits (111), Expect = 6e-05
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 28/210 (13%)
Query: 124 DESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRL 183
DES+ +DE E K E+ K P+ ++ E+ + ++ +
Sbjct: 385 DESMETTGKDE--DENSTGNKGEQTKN---------PDLHEDNVTEQTHHIIIPSYAAWF 433
Query: 184 PHDRMTSQEAACFPDIISGPQQ--TQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAP 241
++ + + E P+ +G + T +++L RN + + NP+ LT A + L
Sbjct: 434 DYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAG- 492
Query: 242 YNSDTVLVHRVHSYLERHGLINFGIYKRIKPLP--TKKTGKVIIIGSGVSGLAAARQLQS 299
D + RVH++LE+ GLIN+ + +P P T ++ SGL +
Sbjct: 493 ---DVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTP 549
Query: 300 FGMDVTLLEARDRVGGRVATFRKGNYVADL 329
G V +A + G RKG + DL
Sbjct: 550 QGRQV---DADTKAG------RKGKELDDL 570
Score = 40.0 bits (92), Expect = 0.009
Identities = 34/111 (30%), Positives = 41/111 (36%), Gaps = 23/111 (20%)
Query: 3 SGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPRK 62
+G A A A A+ AG G GS SE Q +GP + P +
Sbjct: 1009 AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQ----- 1063
Query: 63 KEPPRASPPGGLAEPPGSAGPQAGPT----------VVPGSATPMETGIAE 103
P A PPG PPG GP P VPGS P G+A+
Sbjct: 1064 ---PGAVPPG--VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP---GVAD 1106
Score = 38.1 bits (87), Expect = 0.035
Identities = 36/120 (30%), Positives = 47/120 (39%), Gaps = 15/120 (12%)
Query: 61 RKKEPPRASPPGGLAEPP-GSAGPQA--GPTVVPGSATPMETGIAETPEGRRTSRRKRAK 117
++++PP A PPG PP G+AGP A G V P S P G P S
Sbjct: 988 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS------ 1041
Query: 118 VEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGA 177
E S A + + + A +PPP P P N+ P PS + GA
Sbjct: 1042 -EQIGQAGSTAGPQQQQPAGAPQPGA---VPPGVPPPGPHGPSPFPNQQTP--PSMMPGA 1095
Score = 35.4 bits (80), Expect = 0.23
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 21/110 (19%)
Query: 8 AAAAAAAAAAATGTEAGPGTAGGSENGSEVAA-------QPAGLSGPAEVGPGAV--GER 58
A A A+ A G+ A PG+ G SE + + QPAG P V PG G
Sbjct: 1018 AVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPH 1077
Query: 59 TPR---KKEPPRASPPG--------GLAEPPGSAGPQAGPTVVPGSATPM 97
P ++ P + PG G+A+ PG+ P PG+ TP+
Sbjct: 1078 GPSPFPNQQTPPSMMPGAVPGSGHPGVAD-PGTPLPPDPTAPSPGTVTPV 1126
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 47.4 bits (111), Expect = 6e-05
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 28/210 (13%)
Query: 124 DESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRL 183
DES+ +DE E K E+ K P+ ++ E+ + ++ +
Sbjct: 385 DESMETTGKDE--DENSTGNKGEQTKN---------PDLHEDNVTEQTHHIIIPSYAAWF 433
Query: 184 PHDRMTSQEAACFPDIISGPQQ--TQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAP 241
++ + + E P+ +G + T +++L RN + + NP+ LT A + L
Sbjct: 434 DYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAG- 492
Query: 242 YNSDTVLVHRVHSYLERHGLINFGIYKRIKPLP--TKKTGKVIIIGSGVSGLAAARQLQS 299
D + RVH++LE+ GLIN+ + +P P T ++ SGL +
Sbjct: 493 ---DVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTP 549
Query: 300 FGMDVTLLEARDRVGGRVATFRKGNYVADL 329
G V +A + G RKG + DL
Sbjct: 550 QGRQV---DADTKAG------RKGKELDDL 570
Score = 39.7 bits (91), Expect = 0.012
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 20/104 (19%)
Query: 3 SGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPRK 62
+G A A A A+ AG G GS SE Q +GP + P +
Sbjct: 1009 AGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQ----- 1063
Query: 63 KEPPRASPPGGLAEPPGSAGPQAGPT----------VVPGSATP 96
P A PPG PPG GP P VPGS P
Sbjct: 1064 ---PGAVPPG--VPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHP 1102
Score = 38.1 bits (87), Expect = 0.035
Identities = 36/120 (30%), Positives = 47/120 (39%), Gaps = 15/120 (12%)
Query: 61 RKKEPPRASPPGGLAEPP-GSAGPQA--GPTVVPGSATPMETGIAETPEGRRTSRRKRAK 117
++++PP A PPG PP G+AGP A G V P S P G P S
Sbjct: 988 QQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPS------ 1041
Query: 118 VEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGA 177
E S A + + + A +PPP P P N+ P PS + GA
Sbjct: 1042 -EQIGQAGSTAGPQQQQPAGAPQPGA---VPPGVPPPGPHGPSPFPNQQTP--PSMMPGA 1095
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 46.6 bits (109), Expect = 1e-04
Identities = 59/227 (25%), Positives = 81/227 (35%), Gaps = 50/227 (22%)
Query: 17 AATGTEAGP---GTAGGSENGSEVAAQPAGL--SGPAEVGPGAVGERTPRKKEPPRASPP 71
+A+G E P G G S N + A S P E PG + P PP P
Sbjct: 363 SASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPL---PPPHRGP 419
Query: 72 GGLAEPPGSAGPQAGPTVVPGSATP--------METGIAETPEGRRTSRRKRAKVEYREM 123
G PPG + GP P + + +E +RR+R + E R
Sbjct: 420 AGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQ 479
Query: 124 DESLANLSE-----DEYYSEEERNAKAE------------------KEKKLPP-PPPQAP 159
+E A +E DE + ++ KAE KE PP PPP +
Sbjct: 480 EERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASA 539
Query: 160 PEEENESEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQT 206
P E+EPEEP+ P + A P ++SG T
Sbjct: 540 PTP--ETEPEEPAQAP--------PAQSTPTPGVAAAPTLVSGGGST 576
Score = 37.0 bits (84), Expect = 0.078
Identities = 41/142 (28%), Positives = 52/142 (36%), Gaps = 30/142 (21%)
Query: 35 SEVAAQPAGLSGPAEVGPGAVGERTPRKKEPPRASPPGGLAEP--PGSAGP-QAGPTVVP 91
+E AA PA S PA P AV + P PP AS P EP P A P Q+ PT
Sbjct: 506 AEPAAPPAAPSTPAP--PPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGV 563
Query: 92 GSATPMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKL 151
+A + +G G TS E ++ L + K+
Sbjct: 564 AAAPTLVSG------GGSTSSTSSGSFEASPVEPQLPS-------------------KEG 598
Query: 152 PPPPPQAPPEEENESEPEEPSG 173
P PP + PP EP G
Sbjct: 599 PEPPEEVPPPTTPPVPKVEPKG 620
Score = 35.0 bits (79), Expect = 0.29
Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 27/162 (16%)
Query: 7 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPRKKEPP 66
A + AAA +G G+ + +GS A P P++ GP P ++ PP
Sbjct: 555 AQSTPTPGVAAAPTLVSGGGSTSSTSSGS-FEASPVEPQLPSKEGP------EPPEEVPP 607
Query: 67 RASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEYREMDES 126
+PP EP G GPT P S G+ + + + + ++ ++
Sbjct: 608 PTTPPVPKVEPKGDG---IGPTRQPPS-----QGLGYP----KYQKSLPPRFQRQQQEQL 655
Query: 127 LANLSEDEYYSEEERNAKAEKEKKLPP--------PPPQAPP 160
L + ++ ++ +A PP P PQAPP
Sbjct: 656 LKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPP 697
Score = 33.5 bits (75), Expect = 0.86
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 17/82 (20%)
Query: 34 GSEVAAQPAG--LSGPAEVGPGAVGERTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVP 91
G+E++ +G LSG ++V G +R+ SP GGL G GP P
Sbjct: 1643 GTEMSQSDSGVDLSGDSQVSSGPCSQRS---------SPDGGLK------GAAEGPPKRP 1687
Query: 92 GSATPMETGIAETPEGRRTSRR 113
G ++P+ E P G RR
Sbjct: 1688 GGSSPLNAVPCEGPPGSEPPRR 1709
Score = 32.0 bits (71), Expect = 2.5
Identities = 40/192 (20%), Positives = 68/192 (35%), Gaps = 34/192 (17%)
Query: 11 AAAAAAAATGTEAGPGTAGGSENGSEVA-AQPAGLSGPAEVGPGAVGERTPRKKEPPRAS 69
A ++ +++ G GPG G G + + P S P E P + P PP +S
Sbjct: 1405 AGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGL----PLPPPPPSSS 1460
Query: 70 P-----------PGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKV 118
P G+ + + G PG + G+ + P+G S R +
Sbjct: 1461 AVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQG--PSPRPPTRY 1518
Query: 119 EYREMDESLANLSEDEYYSEEERNAK--------AEKEKKLPPPPPQAPPE-----EENE 165
E + ++ + LS D ++ E + + PP + PP +E
Sbjct: 1519 EPQRVN---SGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEES 1575
Query: 166 SEPEEPSGVEGA 177
P SG G+
Sbjct: 1576 LPPPHSSGFLGS 1587
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,994,996
Number of Sequences: 37866
Number of extensions: 2025331
Number of successful extensions: 24658
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 1334
Number of HSP's that attempted gapping in prelim test: 16599
Number of HSP's gapped (non-prelim): 7643
length of query: 852
length of database: 18,247,518
effective HSP length: 111
effective length of query: 741
effective length of database: 14,044,392
effective search space: 10406894472
effective search space used: 10406894472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.