Guide to the Human Genome
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Name: PAOX Sequence: fasta or formatted (511aa) NCBI GI: 23097272
Description:

polyamine oxidase isoform 1

Referenced in:

Peroxisomes
Urea Cycle, Nitric Oxide, and Polyamines

Other entries for this name:
alt prot [325aa] polyamine oxidase isoform 2
alt prot [486aa] polyamine oxidase isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         47           2
 C cysteine            2.0         10           2
 D aspartate           3.5         18           1
 E glutamate           8.4         43           2
 F phenylalanine       5.5         28           2
 G glycine            10.0         51           3
 H histidine           3.1         16           2
 I isoleucine          2.7         14           1
 K lysine              2.5         13           2
 L leucine            11.5         59           2
 M methionine          1.2          6           2
 N asparagine          1.8          9           2
 P proline             6.5         33           2
 Q glutamine           3.7         19           2
 R arginine            4.9         25           2
 S serine              6.3         32           2
 T threonine           5.5         28           2
 V valine              8.0         41           2
 W tryptophan          1.8          9           1
 Y tyrosine            2.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   polyamine oxidase isoform 1 
PAOX                  0.803   polyamine oxidase isoform 4 
PAOX                  0.558   polyamine oxidase isoform 2 
SMOX                  0.332   spermine oxidase isoform 1 
SMOX                  0.308   spermine oxidase isoform 2 
SMOX                  0.299   spermine oxidase isoform 4 
KDM1                  0.107   amine oxidase (flavin containing) domain 2 isoform a...
KDM1                  0.107   amine oxidase (flavin containing) domain 2 isoform b...
AOF1                  0.074   amine oxidase (flavin containing) domain 1 
MAOB                  0.049   monoamine oxidase B 
SMOX                  0.047   spermine oxidase isoform 3 
MAOA                  0.019   monoamine oxidase A 
PPOX                  0.015   protoporphyrinogen oxidase 
PPOX                  0.015   protoporphyrinogen oxidase 
IL4I1                 0.015   interleukin 4 induced 1 isoform 1 precursor 
IL4I1                 0.015   interleukin 4 induced 1 isoform 2 
PYROXD1               0.006   pyridine nucleotide-disulphide oxidoreductase domain...
LRRC50                0.005   leucine rich repeat containing 50 
CCDC49                0.005   coiled-coil domain containing 49 
UCP1                  0.005   uncoupling protein 1 
ETFDH                 0.005   electron-transferring-flavoprotein dehydrogenase pr...
NRK                   0.005   Nik related kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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