Guide to the Human Genome
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Name: ANKRD16 Sequence: fasta or formatted (361aa) NCBI GI: 58331113
Description:

ankyrin repeat domain 16 isoform a

Referenced in:

Ankyrin Family

Other entries for this name:
alt mRNA [361aa] ankyrin repeat domain 16 isoform a
alt prot [304aa] ankyrin repeat domain 16 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.7         46           2
 C cysteine            3.6         13           1
 D aspartate           6.6         24           1
 E glutamate           5.3         19           2
 F phenylalanine       0.8          3           1
 G glycine             8.3         30           2
 H histidine           5.3         19           1
 I isoleucine          3.0         11           1
 K lysine              4.4         16           2
 L leucine            13.6         49           3
 M methionine          2.2          8           2
 N asparagine          2.2          8           1
 P proline             3.3         12           1
 Q glutamine           4.2         15           2
 R arginine            6.9         25           2
 S serine              4.4         16           1
 T threonine           5.3         19           1
 V valine              4.7         17           1
 W tryptophan          1.1          4           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 16 isoform a 
ANKRD16               1.000   ankyrin repeat domain 16 isoform a 
ANKRD16               0.787   ankyrin repeat domain 16 isoform c 
ANKRD28               0.153   ankyrin repeat domain 28 
ANKRD50               0.150   ankyrin repeat domain 50 
ANK1                  0.150   ankyrin 1 isoform 9 
ANK1                  0.150   ankyrin 1 isoform 1 
ANK1                  0.150   ankyrin 1 isoform 3 
ANK1                  0.150   ankyrin 1 isoform 2 
ANK1                  0.150   ankyrin 1 isoform 4 
ANK3                  0.145   ankyrin 3 isoform 1 
RIPK4                 0.140   ankyrin repeat domain 3 
ANK2                  0.138   ankyrin 2 isoform 3 
ANK2                  0.138   ankyrin 2 isoform 2 
ANK2                  0.138   ankyrin 2 isoform 1 
ASB2                  0.136   ankyrin repeat and SOCS box-containing protein 2 [Ho...
ESPN                  0.132   espin 
ANKRD44               0.126   ankyrin repeat domain 44 
ANKK1                 0.125   ankyrin repeat and kinase domain containing 1 
LOC441869             0.117   hypothetical protein LOC441869 
ANKRD17               0.115   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.115   ankyrin repeat domain protein 17 isoform b 
ANKHD1                0.114   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.114   ANKHD1-EIF4EBP3 protein 
ANKRD52               0.114   ankyrin repeat domain 52 
ANKHD1                0.112   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.112   ankyrin repeat and KH domain containing 1 isoform 2 ...
TNKS                  0.112   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
RNASEL                0.111   ribonuclease L 
TNKS2                 0.105   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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