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Search of human proteins with 5802982
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5802982 proline-rich nuclear receptor coactivator 1 [Homo
sapiens]
(327 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5802982 proline-rich nuclear receptor coactivator 1 [Homo sap... 664 0.0
gi|169161132 PREDICTED: hypothetical protein LOC100131261 [Homo ... 89 4e-18
gi|169160897 PREDICTED: similar to hCG1728885 [Homo sapiens] 87 2e-17
gi|169162148 PREDICTED: similar to hCG1728885 [Homo sapiens] 87 2e-17
gi|8923295 proline-rich nuclear receptor coactivator 2 [Homo sap... 86 6e-17
gi|188536004 zinc finger protein 469 [Homo sapiens] 49 6e-06
gi|92859678 small nuclear RNA activating complex, polypeptide 4,... 48 1e-05
gi|171543895 ataxin 2 [Homo sapiens] 46 4e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 45 9e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 45 9e-05
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens] 45 1e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 2e-04
gi|9945318 MAX binding protein [Homo sapiens] 44 2e-04
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap... 44 2e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 2e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 2e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 43 3e-04
gi|239743660 PREDICTED: hypothetical protein XP_002342926 [Homo ... 43 4e-04
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 42 6e-04
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 42 6e-04
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 42 6e-04
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 42 6e-04
gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo ... 42 6e-04
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 42 6e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 42 7e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 42 7e-04
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 42 7e-04
gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens] 42 0.001
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens] 42 0.001
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens] 42 0.001
>gi|5802982 proline-rich nuclear receptor coactivator 1 [Homo
sapiens]
Length = 327
Score = 664 bits (1713), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 1 MTVVSVPQREPLVLGGRLAPLGFSSRGYFGALPMVTTAPPPLPRIPDPRALPPTLFLPHF 60
MTVVSVPQREPLVLGGRLAPLGFSSRGYFGALPMVTTAPPPLPRIPDPRALPPTLFLPHF
Sbjct: 1 MTVVSVPQREPLVLGGRLAPLGFSSRGYFGALPMVTTAPPPLPRIPDPRALPPTLFLPHF 60
Query: 61 LGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQH 120
LGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQH
Sbjct: 61 LGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQH 120
Query: 121 RPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQTPLRKE 180
RPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQTPLRKE
Sbjct: 121 RPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQTPLRKE 180
Query: 181 VLKSKMGKSEKIALPHGQLVHGIHLYEQPKINRQKSKYNLPLTKITSAKRNENNFWQDSV 240
VLKSKMGKSEKIALPHGQLVHGIHLYEQPKINRQKSKYNLPLTKITSAKRNENNFWQDSV
Sbjct: 181 VLKSKMGKSEKIALPHGQLVHGIHLYEQPKINRQKSKYNLPLTKITSAKRNENNFWQDSV 240
Query: 241 SSDRIQKQEKKPFKNTENIKNSHLKKSAFLTEVSQKENYAGAKFSDPPSPSVLPKPPSHW 300
SSDRIQKQEKKPFKNTENIKNSHLKKSAFLTEVSQKENYAGAKFSDPPSPSVLPKPPSHW
Sbjct: 241 SSDRIQKQEKKPFKNTENIKNSHLKKSAFLTEVSQKENYAGAKFSDPPSPSVLPKPPSHW 300
Query: 301 MGSTVENSNQNRELMAVHLKTLLKVQT 327
MGSTVENSNQNRELMAVHLKTLLKVQT
Sbjct: 301 MGSTVENSNQNRELMAVHLKTLLKVQT 327
>gi|169161132 PREDICTED: hypothetical protein LOC100131261 [Homo
sapiens]
Length = 139
Score = 89.4 bits (220), Expect = 4e-18
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 5/121 (4%)
Query: 208 QPKINRQKSKYNLPLTKITSAKRNENNFWQDSVSSDRIQKQ--EKKPFKNTENIKNSHLK 265
Q ++NRQK+K KI K+ + + S + + K + K F N ++ NS L
Sbjct: 21 QQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAGAWQAMKNGGKNKNFPNNQSW-NSSLS 79
Query: 266 KSAFLTEVSQKENYAGAKFSDPPSPSVLPKPPSHWMGSTVENSNQNRELMAVHLKTLLKV 325
+ L + K+NYAGAKFS+PPSPSVLPKPPSHW+ V + ++E+M LKTLLKV
Sbjct: 80 GPSLLFKSQAKQNYAGAKFSEPPSPSVLPKPPSHWV--PVSFNPSDKEIMTFQLKTLLKV 137
Query: 326 Q 326
Q
Sbjct: 138 Q 138
>gi|169160897 PREDICTED: similar to hCG1728885 [Homo sapiens]
Length = 139
Score = 87.4 bits (215), Expect = 2e-17
Identities = 51/121 (42%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 208 QPKINRQKSKYNLPLTKITSAKRNENNFWQDSVSSDRIQKQ--EKKPFKNTENIKNSHLK 265
Q ++NRQK+K KI K+ + + S + + K + K F N ++ NS L
Sbjct: 21 QQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAGAWQAMKNGGKNKNFPNNQSW-NSSLS 79
Query: 266 KSAFLTEVSQKENYAGAKFSDPPSPSVLPKPPSHWMGSTVENSNQNRELMAVHLKTLLKV 325
+ L + +NYAGAKFS+PPSPSVLPKPPSHW+ V + ++E+M LKTLLKV
Sbjct: 80 GPSLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWV--PVSFNPSDKEIMTFQLKTLLKV 137
Query: 326 Q 326
Q
Sbjct: 138 Q 138
>gi|169162148 PREDICTED: similar to hCG1728885 [Homo sapiens]
Length = 139
Score = 87.4 bits (215), Expect = 2e-17
Identities = 51/121 (42%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 208 QPKINRQKSKYNLPLTKITSAKRNENNFWQDSVSSDRIQKQ--EKKPFKNTENIKNSHLK 265
Q ++NRQK+K KI K+ + + S + + K + K F N ++ NS L
Sbjct: 21 QQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAGAWQAMKNGGKNKNFPNNQSW-NSSLS 79
Query: 266 KSAFLTEVSQKENYAGAKFSDPPSPSVLPKPPSHWMGSTVENSNQNRELMAVHLKTLLKV 325
+ L + +NYAGAKFS+PPSPSVLPKPPSHW+ V + ++E+M LKTLLKV
Sbjct: 80 GPSLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWV--PVSFNPSDKEIMTFQLKTLLKV 137
Query: 326 Q 326
Q
Sbjct: 138 Q 138
>gi|8923295 proline-rich nuclear receptor coactivator 2 [Homo
sapiens]
Length = 139
Score = 85.5 bits (210), Expect = 6e-17
Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 208 QPKINRQKSKYNLPLTKITSAKRNENNFWQDSVSSDRIQKQ--EKKPFKNTENIKNSHLK 265
Q ++NRQK+K KI K+ + + S ++ + + + K F N ++ NS L
Sbjct: 21 QQQLNRQKTKEQNSQMKIVHKKKERGHGYNSSAAAWQAMQNGGKNKNFPNNQSW-NSSLS 79
Query: 266 KSAFLTEVSQKENYAGAKFSDPPSPSVLPKPPSHWMGSTVENSNQNRELMAVHLKTLLKV 325
L + +NYAGAKFS+PPSPSVLPKPPSHW+ V + ++E+M LKTLLKV
Sbjct: 80 GPRLLFKSQANQNYAGAKFSEPPSPSVLPKPPSHWV--PVSFNPSDKEIMTFQLKTLLKV 137
Query: 326 Q 326
Q
Sbjct: 138 Q 138
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 48.9 bits (115), Expect = 6e-06
Identities = 43/136 (31%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Query: 65 GPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSL 124
GP +PQ R P+ RSL PK + V Q+P+ ++ RPSL
Sbjct: 1136 GPGRSPQARGPS----RSLETGAAAREGGPKCADRPSVAPKDPLQVPTNTETSEETRPSL 1191
Query: 125 E---GGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQTPLRKEV 181
+ + P T A + AL PAA AG GASP L L P P P R +
Sbjct: 1192 DFPQEAKEPETAEESAPDSTEFTEALRSPPAACAGEMGASPGL--LIPEQP--PPSRHDT 1247
Query: 182 LKSKMGKSEKIALPHG 197
K S PHG
Sbjct: 1248 GTPKPSGSLANTAPHG 1263
>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
190kDa [Homo sapiens]
Length = 1469
Score = 47.8 bits (112), Expect = 1e-05
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 15/138 (10%)
Query: 40 PPLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRRK 99
PPLP P R P GP + P + P + G+ + A +
Sbjct: 931 PPLPHTPHGRPAP------------GPTVLNVPLSGPGAPAAAKPGTSGSWQEAGTSAKD 978
Query: 100 KKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEG 159
K++ A L F + + P+ ++PA GP G V P + L S A AA +
Sbjct: 979 KRLSTMQALPLAPVFSEAEGTAPA--ASQAPALGP-GQISVSCPESGLGQSQAPAASRKQ 1035
Query: 160 ASPDLAPLRPAAPGQTPL 177
P+ P PAAP TPL
Sbjct: 1036 GLPEAPPFLPAAPSPTPL 1053
Score = 28.9 bits (63), Expect = 6.5
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 122 PSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQ 174
P+ + P G +GA + GPAA+L+P P ++ ++G S + A AAPG+
Sbjct: 574 PARQSTSQPWRGGAGAW-LGGPAASLSP-PKGSSASQGGSKE-ASTTAAAPGE 623
Score = 28.9 bits (63), Expect = 6.5
Identities = 48/170 (28%), Positives = 63/170 (37%), Gaps = 18/170 (10%)
Query: 14 LGGRLAPLGFSSRGYFGALPMVTTAPPPLPRIPDPRALPPTLFLPHFLGGDGP-----CL 68
LG AP +G A P + AP P P P +L + PH + P L
Sbjct: 1023 LGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSL-THIGGPH-VATSVPLPVTWVL 1080
Query: 69 TPQPRAPAALPN-RSLAVAGGTPRAAPKKRR----KKKVRASPAGQLPSRFHQYQQHRPS 123
T Q P +P SL GTP A + RA+ + P+ +Q P
Sbjct: 1081 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQ---PP 1137
Query: 124 LEGGRSPATGPSGAQEVPGPAA-ALAPSPAAAAGTEGASPDLAPLRPAAP 172
R P PS + P P AL+ SPA A G+ P A + P
Sbjct: 1138 ANMNREPE--PSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIP 1185
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 46.2 bits (108), Expect = 4e-05
Identities = 79/331 (23%), Positives = 116/331 (35%), Gaps = 60/331 (18%)
Query: 22 GFSSRGYFGALPMVTTAPPPLPRIPD-----PRALPPTLFLPHFLGGDGPCLTPQPRAPA 76
G R G +P + P P R P P +LPP P T P P
Sbjct: 540 GSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATP----------TRPPSRPP 589
Query: 77 ALPNR--SLAVAGGTPRAAPKKRRKKKV------RASPAGQLPSRFHQYQQHRPSLEGGR 128
+ P+R S A G+P AP K++ R SP Q R H+ R S+ G
Sbjct: 590 SRPSRPPSHPSAHGSP--APVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGL 647
Query: 129 SPATGPSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPL--RPAAP-----GQTPLRKEV 181
+ ++ P A +PS + P L+P RP +P G TP +
Sbjct: 648 EFVSHNPPSEAATPPVARTSPSGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVL 707
Query: 182 LKSKMG--KSEKIALP------------------HGQLVHGIHLYEQPKINRQKSKYNL- 220
+ G +E +A+P L +Q + + +K N+
Sbjct: 708 ASPQAGIIPTEAVAMPIPAASPTPASPASNRAVTPSSEAKDSRLQDQRQNSPAGNKENIK 767
Query: 221 PLTKITSAKRNENNFWQDSVSSDRIQKQEKKPFKNTENIKNSHLKKSAFLTEVSQKENYA 280
P S + EN VS R Q + K FKN ++ S +S + +N
Sbjct: 768 PNETSPSFSKAENKGISPVVSEHRKQIDDLKKFKNDFRLQPSSTSES---MDQLLNKNRE 824
Query: 281 GAKFSDPPSPSVLPKPPSHWMGSTVENSNQN 311
G K D + P S +ENS+ N
Sbjct: 825 GEKSRDLIKDKIEPSAKD----SFIENSSSN 851
Score = 40.4 bits (93), Expect = 0.002
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 37/220 (16%)
Query: 84 AVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGP 143
+V G PR +PK R + R + G PS P L SP G + V P
Sbjct: 675 SVVSGVPRLSPKTHRPRSPRQNSIGNTPS--------GPVL---ASPQAGIIPTEAVAMP 723
Query: 144 AAALAPSPAAAAGTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGKSEKIALPHGQLVHGI 203
A +P+PA+ A +P + + L+ + S G E I P+
Sbjct: 724 IPAASPTPASPASNRAVTPS------SEAKDSRLQDQRQNSPAGNKENIK-PN------- 769
Query: 204 HLYEQPKINRQKSKYNLPLT-----KITSAKRNENNF----WQDSVSSDRIQKQEKKPFK 254
P ++ ++K P+ +I K+ +N+F S S D++ + ++ K
Sbjct: 770 --ETSPSFSKAENKGISPVVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEK 827
Query: 255 NTENIKNSHLKKSAFLTEVSQKENYAGAKFSDPPSPSVLP 294
+ + IK+ ++ SA + + + + S P SPS+ P
Sbjct: 828 SRDLIKDK-IEPSAKDSFIENSSSNCTSGSSKPNSPSISP 866
Score = 33.5 bits (75), Expect = 0.26
Identities = 68/289 (23%), Positives = 103/289 (35%), Gaps = 76/289 (26%)
Query: 20 PLGFSSRGYFGALP--MVTTAPPPLPRIPDP--RALPPTL-------------FLP---H 59
P S RG GA P + APPP P P ++ PP+ F P
Sbjct: 34 PARRSGRGGGGAAPGPYPSAAPPPPGPGPPPSRQSSPPSASDCFGSNGNGGGAFRPGSRR 93
Query: 60 FLGGDGP------CLTP--QPRAPAALPNRSLAV----------------AGGTPRAAP- 94
LG GP L P P AP A P R+ + A G PR A
Sbjct: 94 LLGLGGPPRPFVVLLLPLASPGAPPAAPTRASPLGARASPPRSGVSLARPAPGCPRPACE 153
Query: 95 ----------KKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGR---------SPATGPS 135
K +++++ + Q + Q QQ P+ R SPA PS
Sbjct: 154 PVYGPLTMSLKPQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPS 213
Query: 136 GAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPG--QTPLRKE----------VLK 183
+ ++A APS AA + G P L R + G Q+ + + +L
Sbjct: 214 PSSSSVSSSSATAPSSVVAATSGGGRPGLGRGRNSNKGLPQSTISFDGIYANMRMVHILT 273
Query: 184 SKMGKSEKIALPHGQLVHGIHLYEQPKINRQKSKYNLPLTKITSAKRNE 232
S +G ++ + +G + G+ PK + + T+ +S + E
Sbjct: 274 SVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKRE 322
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 45.1 bits (105), Expect = 9e-05
Identities = 45/159 (28%), Positives = 60/159 (37%), Gaps = 17/159 (10%)
Query: 31 ALPMVTTAPPPLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGTP 90
A+ +V P L +P P A + P F+G P P PAA + A A P
Sbjct: 214 AVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPP 273
Query: 91 RAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPAT--------GPSGAQEVPG 142
AP + PAG P+ + GG + A GP+G PG
Sbjct: 274 PPAPATLARPP--GHPAGP-PTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG 330
Query: 143 P-AAALAPSPAAAAGT-----EGASPDLAPLRPAAPGQT 175
P AAA AP+P A + + A P L + P T
Sbjct: 331 PGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPAST 369
Score = 40.0 bits (92), Expect = 0.003
Identities = 43/157 (27%), Positives = 51/157 (32%), Gaps = 34/157 (21%)
Query: 43 PRIPDPRALPPTLFLPHFLGGD-------GPCLTPQPRAPAALPN-----RSLAVAGGTP 90
PR P+ RA H + G GP P AP A P R+ GG
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPA-APAEGAPGAAPEPPPAGRARPGGGGPQ 103
Query: 91 RAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRS--------------PATGPSG 136
R P R+ V A PA RP EG P P+G
Sbjct: 104 RPGPPSPRRPLVPAGPAPPAAKL-------RPPPEGSAGSCAPVPAAAAVAAGPEPAPAG 156
Query: 137 AQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPG 173
+ GPAA A + G P P +PA PG
Sbjct: 157 PAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPG 193
Score = 34.3 bits (77), Expect = 0.16
Identities = 57/188 (30%), Positives = 65/188 (34%), Gaps = 34/188 (18%)
Query: 9 REPLVLGG------RLAPLGFSSRGYFGALPM---VTTAPPPLPRIPDPRALPPTLFLPH 59
R PLV G +L P S G +P V P P P P A P L
Sbjct: 111 RRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARA 170
Query: 60 FLG---GDGPCLTPQPRAPAA-----LPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLP 111
G G GP P P PA N S A+ AAP V PA LP
Sbjct: 171 GPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAV---SLVNNGPAALLP 227
Query: 112 SRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAA---LAPSPAAAAGTEGASPDLAPLR 168
+P+ G GA P PAA AP+PAA A A+P P
Sbjct: 228 LP-------KPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPA----AAPPPPPPA 276
Query: 169 PAAPGQTP 176
PA + P
Sbjct: 277 PATLARPP 284
Score = 32.7 bits (73), Expect = 0.45
Identities = 40/160 (25%), Positives = 45/160 (28%), Gaps = 38/160 (23%)
Query: 33 PMVTTAPPPLPRIPDPRALPP----------------TLFLPHFLGGDGPCLTPQPRAPA 76
P V A PP P P P A P TL P P P PA
Sbjct: 242 PFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPA 301
Query: 77 ALPNRSLAVAGGTPRAAPKKRRKKKVRASPA-------------GQLPSRFHQYQQHRPS 123
A N A G P AP V P + P R Q
Sbjct: 302 AAQNGGSA--GAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQ 359
Query: 124 LEGGRSPAT-------GPSGAQEVPGPAAALAPSPAAAAG 156
PA+ GP+ +P PAA P+P G
Sbjct: 360 TLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTG 399
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 45.1 bits (105), Expect = 9e-05
Identities = 49/148 (33%), Positives = 60/148 (40%), Gaps = 26/148 (17%)
Query: 33 PMVTTAPPPL--PRIPDPRALP--PTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGG 88
P T P P P P P+ P P + P G P TP P+ + P + G
Sbjct: 988 PPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGS--PAATPFPKGASTPPAATPPSPKG 1045
Query: 89 TPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALA 148
+P A P K +PA LPS +GG PAT PS + P P AA
Sbjct: 1046 SPAATPLP---KGAPTTPAATLPSP-----------KGG--PAT-PS-LKGAPTPPAATP 1087
Query: 149 PSPAAAAGTEGASPDLAPLRPAAPGQTP 176
PSP T SP AP+ PAA +P
Sbjct: 1088 PSPKGGPATP--SPKGAPMPPAATPPSP 1113
Score = 43.5 bits (101), Expect = 3e-04
Identities = 49/171 (28%), Positives = 63/171 (36%), Gaps = 23/171 (13%)
Query: 33 PMVTTAPPPLPR----IPDPRALP--PTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVA 86
P A PP P+ P P+ P P P GG TP P+ P +
Sbjct: 1195 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG---LATPSPKGAPTTPAATPPSP 1251
Query: 87 GGTPRAAPKKRRKKKVRASPA---GQLPSRFHQYQQHR-----PSLEGGRSPATGPSGAQ 138
G P P K A+P G L + H+ + PS +GG PAT P +
Sbjct: 1252 KGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG--PATSPP--K 1307
Query: 139 EVPGPAAALAPSPAAAAGTEG--ASPDLAPLRPAAPGQTPLRKEVLKSKMG 187
P P AA PSP + GT +P + P +P TP S G
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG 1358
Score = 39.7 bits (91), Expect = 0.004
Identities = 50/157 (31%), Positives = 62/157 (39%), Gaps = 23/157 (14%)
Query: 33 PMVTTAP-PPLPR-IPDPRALPPT----LFLPHFLGGDGPCLTPQPRAPAALPNRSLAVA 86
P T +P PP P+ P P A+ P + LP P TP P LP A
Sbjct: 850 PATTHSPTPPSPKGAPTPSAVTPLSPKGVTLP-------PKETPTPSV-VNLPFPKEGPA 901
Query: 87 GGTPRAAPK----KRRKKKVRASPAGQ-LPSRFHQYQQHRPSLEGGRSPATGPS--GAQE 139
P+ AP KK RA+PA + +P+ P SP GP+ +
Sbjct: 902 TPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKW 961
Query: 140 VPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQTP 176
P P AA PSP T SP AP PAA +P
Sbjct: 962 APTPPAATPPSPKGGPATP--SPKGAPTPPAATPPSP 996
Score = 37.4 bits (85), Expect = 0.018
Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 21/142 (14%)
Query: 39 PPPLPRIPDPRALPPTL----FLPHFLGGDGPCLT--PQPRA-PAALPNRSL----AVAG 87
PPP P A PP+L P G P + P P+ PA P + A
Sbjct: 1258 PPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATP 1317
Query: 88 GTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAAL 147
+P+ +P K PA PS + P+L PAT PS P++
Sbjct: 1318 PSPKGSPGTPPPKGAPTPPAVTPPS-----PKGTPTL-----PATTPSSKGGPTTPSSKE 1367
Query: 148 APSPAAAAGTEGASPDLAPLRP 169
P+P AA + P + P P
Sbjct: 1368 GPTPPAATPSHKGGPAMTPPSP 1389
Score = 37.0 bits (84), Expect = 0.024
Identities = 43/147 (29%), Positives = 53/147 (36%), Gaps = 38/147 (25%)
Query: 31 ALPMVTTAPPPLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGTP 90
AL M +++P P P+ +P + P P PAA P +P
Sbjct: 910 ALSMTSSSPKKARATPAPKGIPAS-----------PSPKGAPTPPAATPP--------SP 950
Query: 91 RAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPAT-GPSGAQEVPGPAAALAP 149
+ P K PA PS +GG PAT P GA P P AA P
Sbjct: 951 KGGPATPSPKWAPTPPAATPPSP-----------KGG--PATPSPKGA---PTPPAATPP 994
Query: 150 SPAAAAGTEGASPDLAPLRPAAPGQTP 176
SP T SP AP PA +P
Sbjct: 995 SPKGGPATP--SPKGAPTPPAVTPPSP 1019
Score = 37.0 bits (84), Expect = 0.024
Identities = 46/179 (25%), Positives = 59/179 (32%), Gaps = 20/179 (11%)
Query: 24 SSRGYFGALPMVTTAPPPLPRIPDPRALPPT-LFLPHFLGGDG-PCLTPQPRAPAALPNR 81
S +G G P PP P P+ P P GG P P PAA P+
Sbjct: 1319 SPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSH 1378
Query: 82 SLAVAGGTPRAAPKKRRKKKVRASPAGQ--LPSRFHQYQQHRPSLEGGRSPATGPSGAQE 139
G P P ++ SP G P+ + P+ R A PS
Sbjct: 1379 K-----GGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDL 1433
Query: 140 VPGPA----------AALAPSPAAAAGTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGK 188
P PA A AP A + P L + P +P + P K+V S K
Sbjct: 1434 TP-PAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPK 1491
Score = 31.6 bits (70), Expect = 1.0
Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 33/166 (19%)
Query: 34 MVTTAPPPLPRIPDPRALP--PTLFL-----PHFLGGDGPCLTPQPRAPAALPNRSLAVA 86
++ ++P +P P R P PT L P L + P P+ P ++ A+
Sbjct: 1508 VIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPS--PKKTPAIP 1565
Query: 87 GGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAA 146
TP+ AP K+ +SP PS + +G SP +E+ P A
Sbjct: 1566 --TPKEAPATPSSKEA-SSPPAVTPSTY----------KGAPSP-------KELLIPPAV 1605
Query: 147 LAPSPAAA---AGTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGKS 189
+PSP A SP+ P PA G TP V S + S
Sbjct: 1606 TSPSPKEAPTPPAVTPPSPEKGPATPAPKG-TPTSPPVTPSSLKDS 1650
Score = 30.8 bits (68), Expect = 1.7
Identities = 39/147 (26%), Positives = 52/147 (35%), Gaps = 12/147 (8%)
Query: 30 GALPMVTTAPPPLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGT 89
G P+V T P + P T P GP +P +PAAL +A +
Sbjct: 437 GTTPLVVTNPCTIAAAPTTTFEVATCVSPPM--SSGPISNIEPTSPAALVMAPVAPKEPS 494
Query: 90 PRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAP 149
+ A R + SP P ++ PS + P Q VP
Sbjct: 495 TQVATTLR----IPVSPPLPDPEDL----KNLPSSVLVKFPTQ--KDLQTVPASLEGAPF 544
Query: 150 SPAAAAGTEGASPDLAPLRPAAPGQTP 176
SPA A T P + PL AAP +P
Sbjct: 545 SPAQAGLTTKKDPTVLPLVQAAPKNSP 571
Score = 28.5 bits (62), Expect = 8.5
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 127 GRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGAS-----PDLAPLRPAAPGQTPL 177
G + T P+ QE+P P A A P ++A + A+ P L P AP Q PL
Sbjct: 3 GEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPL 58
>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
Length = 237
Score = 44.7 bits (104), Expect = 1e-04
Identities = 50/175 (28%), Positives = 68/175 (38%), Gaps = 12/175 (6%)
Query: 34 MVTTAPPPLPRIPDPRALPPTLFLPHFLGGDG--PCLTPQPRAPAALPNRSLAVAGGTPR 91
+++ PL + P+A LFLP G P L P A A L + + A G PR
Sbjct: 4 LISARGQPLLEVLPPQAHLGALFLPEAPLGLSAQPALWPTLAALALLSSVAEASLGSAPR 63
Query: 92 AAPKKRRKKKVRASPAGQLP----SRFHQYQQHRPSLEGGRSPATGPSGAQEVP-GPAAA 146
+ + V ASPAG LP +R+ + RP + R P+ +P G AA
Sbjct: 64 SPAPREGPPPVLASPAGHLPGGRTARWCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAA 123
Query: 147 LAPSP---AAAAGTEGA--SPDLAPLRPAAPGQTPLRKEVLKSKMGKSEKIALPH 196
A P A AAG G L P+R G + G + PH
Sbjct: 124 RAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRRARSPH 178
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 44.3 bits (103), Expect = 2e-04
Identities = 50/156 (32%), Positives = 56/156 (35%), Gaps = 23/156 (14%)
Query: 33 PMVTTAPPPLPRIPDPRALPPTLFLPHFLGGD--GPCLTPQPRAPAALPNRSLAVAGGTP 90
PM +A PP P+ P P A PP P P TP PR P L L V P
Sbjct: 715 PMSPSATPP-PQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPP 773
Query: 91 RAAPKKRRKKKVRASPAG----------QLPSRFHQYQQHRPSLEGGRSP-ATGPSGAQE 139
+ P K +P P+ F PS SP AT P A
Sbjct: 774 ASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPP 833
Query: 140 V-PGPAAALAPSPAAAAGTEGASPDL-APLRPAAPG 173
V P + PSP ASP L AP RP PG
Sbjct: 834 VLAAPLLQVPPSPP-------ASPTLQAPRRPPTPG 862
Score = 41.6 bits (96), Expect = 0.001
Identities = 43/150 (28%), Positives = 57/150 (38%), Gaps = 15/150 (10%)
Query: 35 VTTAPPPLPR---IPDPRALPPTLFLPHFLGGDGPCL----TPQPRAPAALPNRSLAVAG 87
+TT PP P P P+A PP L P G P L TP P+AP L L
Sbjct: 576 LTTPPPETPSSIATPPPQA-PPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPP 634
Query: 88 GTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAAL 147
P + P A+P+ Q P+ + P P P P P +
Sbjct: 635 SPPASPPLSPL-----ATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP-PVSPS 688
Query: 148 APSPAAAAGTEGASP-DLAPLRPAAPGQTP 176
A P+ A + A P + P PA+P +P
Sbjct: 689 ATPPSQAPPSLAAPPLQVPPSPPASPPMSP 718
Score = 38.5 bits (88), Expect = 0.008
Identities = 43/140 (30%), Positives = 54/140 (38%), Gaps = 21/140 (15%)
Query: 31 ALPMVTTAPPPLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGTP 90
+LPM A PP P+ P A PP LP +P P P A +P
Sbjct: 775 SLPMSPLAKPP-PQAPPALATPPLQALP----------SPPASFPGQAPFSPSASLPMSP 823
Query: 91 RAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPAT-GPSGAQEVPGPAAALAP 149
A P + V A+P Q+P P+L+ R P T GP + P ALAP
Sbjct: 824 LATPPPQAPP-VLAAPLLQVPPS----PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP 878
Query: 150 SPAAAAGTEGAS----PDLA 165
P +S PDLA
Sbjct: 879 GPPPPPSRSPSSTLSGPDLA 898
Score = 37.7 bits (86), Expect = 0.014
Identities = 42/145 (28%), Positives = 50/145 (34%), Gaps = 20/145 (13%)
Query: 38 APPPLPRIPDPRALPPTLFLPHFLGGD--------GPCLTPQPRAPAALPNRSLAVAGGT 89
+PP P P PP+L P P TP P+AP L L V
Sbjct: 682 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSP 741
Query: 90 PRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAA--AL 147
P + P SP+ P R P PA+ P P P A AL
Sbjct: 742 PASPP---------MSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPAL 792
Query: 148 APSPAAAAGTEGAS-PDLAPLRPAA 171
A P A + AS P AP P+A
Sbjct: 793 ATPPLQALPSPPASFPGQAPFSPSA 817
Score = 34.7 bits (78), Expect = 0.12
Identities = 54/190 (28%), Positives = 64/190 (33%), Gaps = 46/190 (24%)
Query: 34 MVTTAPPPLPRIPDPRALPPTLF------------LPHFLGGDGPCLTPQPRAPAALPNR 81
++T PP PR P P P L L GG G P+ AP A P R
Sbjct: 24 LLTPRPPGSPR-PPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPES-APRAGPTR 81
Query: 82 SLAVAGGTP-----------RAAPKK-----------RRKKKVRASPAGQLPSRFHQYQQ 119
S + P RA P K R R P GQ R +
Sbjct: 82 SAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEET 141
Query: 120 --HRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAA-----AGTEGASPDLAP-LRPAA 171
+ E + A ++ GP PSPA A AGTE P AP RP
Sbjct: 142 VARGKATEAPKRSALSAGARRDTSGPTPG-TPSPAMARRSRAAGTEVGLPRPAPSARPRP 200
Query: 172 PGQTPLRKEV 181
P + P RK V
Sbjct: 201 PTEGP-RKSV 209
Score = 31.6 bits (70), Expect = 1.0
Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 9/142 (6%)
Query: 33 PMVTTAPPPLPRIPDPRA-----LPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAG 87
P +APP L +P P A PP++ P P + P +L + SL A
Sbjct: 345 PPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ-AP 403
Query: 88 GTPRAAPKKRRKKKVRASPAGQLPSRF--HQYQQHRPSLEGGRSPATGPSGAQEVPGPAA 145
+P A + + SP Q F +Q + SL PA+ P + + P +
Sbjct: 404 PSPLALSSLQATTSL-GSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLS 462
Query: 146 ALAPSPAAAAGTEGASPDLAPL 167
A P + + SP +PL
Sbjct: 463 LPASPPLQTSLSPAVSPLSSPL 484
Score = 30.8 bits (68), Expect = 1.7
Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 75 PAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGP 134
P + P RS A GTPRA + K P G R Q R +PA GP
Sbjct: 248 PLSSPARSGPSARGTPRAPAHPSQPK-----PKGLQALRPPQVTPPRKDA----APALGP 298
Query: 135 SGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQTPL 177
+ + P+ + + A+P A L P+ P TPL
Sbjct: 299 LSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPL 341
Score = 30.8 bits (68), Expect = 1.7
Identities = 53/176 (30%), Positives = 72/176 (40%), Gaps = 35/176 (19%)
Query: 27 GYFGALPMVTTAPP-----PLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRA---PAAL 78
G + P+ T +P P+P PD A P LP L P TP P A P+A
Sbjct: 297 GPLSSSPLATPSPSGTKARPVPP-PDNAATP----LPATLPPSPPLATPLPLAPPSPSAP 351
Query: 79 PN-RSLAVAGGTPRA-APKKRRKKKVRASPAGQ-LPSRFHQYQQHRPSLEGGRSP----- 130
P+ ++L TP + AP ++A P+ Q +P + PSL+ SP
Sbjct: 352 PSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSS 411
Query: 131 --ATGPSGAQEV----------PGPAAALAPSPAAAAGTEGASPDL-APLR-PAAP 172
AT G+ + P A SP+ A T SP L APL PA+P
Sbjct: 412 LQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASP 467
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 44.3 bits (103), Expect = 2e-04
Identities = 87/327 (26%), Positives = 115/327 (35%), Gaps = 79/327 (24%)
Query: 32 LPMVTTAPPPLPRIPDPRALP-PTLFLPHFLGGDGP-CLTPQPRAPAALPNRSLAVAGGT 89
LP+ APPP P P P A P P +P + + P L P P PAA LA
Sbjct: 65 LPLSPPAPPPAP--PPPLATPAPLTVIPIPVVTNSPQPLPPPPPLPAAAQPLPLAPRQPA 122
Query: 90 PRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRS---PATGPSGAQEVPGPAAA 146
AP K+ PA LPSR Q P L ++ P P Q +P P
Sbjct: 123 LVGAPGLSIKE-----PA-PLPSR-PQVPTPAPLLPDSKATIPPNGSPKPLQPLPTPVLT 175
Query: 147 LAPSPAAAAGTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGKSEKIALPHG---QLVHG- 202
+AP P G P LAP +P P L K ++ SE+ P G + VH
Sbjct: 176 IAPHP-------GVQPQLAPQQPPPPTLGTL-KLAPAEEVKSSEQKKRPGGIGTREVHNK 227
Query: 203 ------IHLYE--------QPKINRQK----SKYNLPLTKITSAKRNENNF--------- 235
HL E P ++ +K S L I S KR E +
Sbjct: 228 LEKNRRAHLKECFETLKRNIPNVDDKKTSNLSVLRTALRYIQSLKRKEKEYEHEMERLAR 287
Query: 236 ------------------WQDSVSSDRIQKQEKKPFKNTENIKNSHLKKSAFLTEVSQKE 277
W D + DR+ +Q +P + S + + +E
Sbjct: 288 EKIATQQRLAELKHELSQWMDVLEIDRVLRQTGQP--EDDQASTSTASEGEDNIDEDMEE 345
Query: 278 NYAG---AKFSDPPSPSVLPK---PPS 298
+ AG K S P P +L PPS
Sbjct: 346 DRAGLGPPKLSHRPQPELLKSTLPPPS 372
Score = 31.6 bits (70), Expect = 1.0
Identities = 37/132 (28%), Positives = 45/132 (34%), Gaps = 28/132 (21%)
Query: 32 LPMVTTAPPPLPRIPDPR----ALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAG 87
LP +T P PLP P P ALPP P QP+ LP A
Sbjct: 368 LPPPSTTPAPLPPHPHPHPHSVALPPAHL---------PVQQQQPQQKTPLP------AP 412
Query: 88 GTPRAAPKKR---RKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSG------AQ 138
P AAP + + A+ G H H ++ GP G A
Sbjct: 413 PPPPAAPAQTLVPAPAHLVATAGGGSTVIAHTATTHASVIQTVNHVLQGPGGKHIAHIAP 472
Query: 139 EVPGPAAALAPS 150
P PA LAP+
Sbjct: 473 SAPSPAVQLAPA 484
>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
sapiens]
Length = 735
Score = 44.3 bits (103), Expect = 2e-04
Identities = 44/150 (29%), Positives = 61/150 (40%), Gaps = 39/150 (26%)
Query: 41 PLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGTP--------RA 92
P+P DPR P P + L PQ APA+ P ++ P +
Sbjct: 114 PIPE-EDPRPPAPEPPGPQPGSAESEGLAPQGAAPASPPTKASRTKSPGPARRLSIKMKK 172
Query: 93 APKKRRK----------KKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPG 142
P+ RR+ ++ RA+PAG + SR+H S GG PA GP G +
Sbjct: 173 LPELRRRLSLRGPRAGRERERAAPAGSVISRYHL-----DSSVGGPGPAAGPGGTR---- 223
Query: 143 PAAALAPSPAAAAGTEGASPDLAPLRPAAP 172
SP A ++G SP+ RPA P
Sbjct: 224 -------SPRAGYLSDGDSPE----RPAGP 242
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.9 bits (102), Expect = 2e-04
Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 20/158 (12%)
Query: 33 PMVTTAPPPLPRIPDPRALP----------PTLFLPH-FLGGD--GPCLTPQPRAPAALP 79
P +APP L +P P A P PTL H FL P TP P+AP AL
Sbjct: 342 PPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALA 401
Query: 80 NRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQE 139
L P + P A+P+ Q P+ + P P P
Sbjct: 402 LPPLQAPPSPPASPP-----LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA 456
Query: 140 VPGPAAALAPSPAAAAGTEGASP-DLAPLRPAAPGQTP 176
P P + A P+ A + A P + P PA+P +P
Sbjct: 457 SP-PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP 493
Score = 40.8 bits (94), Expect = 0.002
Identities = 47/147 (31%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Query: 38 APPPLPRIPDPRALPPTLFLPHFLGGD--------GPCLTPQPRAPAALPNRSLAVAGGT 89
+PP P P PP+L P P TP P+AP L L +A
Sbjct: 457 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPP 516
Query: 90 PRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSP-ATGPSGAQEV-PGPAAAL 147
P+ AP ++A P+ P+ F PS SP AT P A V P +
Sbjct: 517 PQ-APPALATPPLQALPSP--PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV 573
Query: 148 APSPAAAAGTEGASPDL-APLRPAAPG 173
PSP ASP L AP RP PG
Sbjct: 574 PPSPP-------ASPTLQAPRRPPTPG 593
Score = 37.0 bits (84), Expect = 0.024
Identities = 45/149 (30%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 33 PMVTTAPPPLPRIPDPRALPPTLF------LPHFLGGDGPCLTPQPRAPAALPNRS---- 82
PM +A PP P+ P P A PP P L P L P PA+ P ++
Sbjct: 490 PMSPSATPP-PQAPPPLAAPPLQLAKPPPQAPPALA--TPPLQALPSPPASFPGQAPFSP 546
Query: 83 LAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPG 142
A +P A P + V A+P Q+P P+L+ R P T P V G
Sbjct: 547 SASLPMSPLATPPP-QAPPVLAAPLLQVPPS----PPASPTLQAPRRPPT-PGPDTSVSG 600
Query: 143 PAAALA------PSPAAAAGTEGASPDLA 165
P LA P P+ + + + PDLA
Sbjct: 601 PRLTLALAPGPPPPPSRSPSSTLSGPDLA 629
Score = 34.7 bits (78), Expect = 0.12
Identities = 54/190 (28%), Positives = 64/190 (33%), Gaps = 46/190 (24%)
Query: 34 MVTTAPPPLPRIPDPRALPPTLF------------LPHFLGGDGPCLTPQPRAPAALPNR 81
++T PP PR P P P L L GG G P+ AP A P R
Sbjct: 24 LLTPRPPGSPR-PPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPES-APRAGPTR 81
Query: 82 SLAVAGGTP-----------RAAPKK-----------RRKKKVRASPAGQLPSRFHQYQQ 119
S + P RA P K R R P GQ R +
Sbjct: 82 SAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEET 141
Query: 120 --HRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAA-----AGTEGASPDLAP-LRPAA 171
+ E + A ++ GP PSPA A AGTE P AP RP
Sbjct: 142 VARGKATEAPKRSALSAGARRDTSGPTPG-TPSPAMARRSRAAGTEVGLPRPAPSARPRP 200
Query: 172 PGQTPLRKEV 181
P + P RK V
Sbjct: 201 PTEGP-RKSV 209
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 43.9 bits (102), Expect = 2e-04
Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 20/158 (12%)
Query: 33 PMVTTAPPPLPRIPDPRALP----------PTLFLPH-FLGGD--GPCLTPQPRAPAALP 79
P +APP L +P P A P PTL H FL P TP P+AP AL
Sbjct: 303 PPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALA 362
Query: 80 NRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQE 139
L P + P A+P+ Q P+ + P P P
Sbjct: 363 LPPLQAPPSPPASPP-----LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA 417
Query: 140 VPGPAAALAPSPAAAAGTEGASP-DLAPLRPAAPGQTP 176
P P + A P+ A + A P + P PA+P +P
Sbjct: 418 SP-PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP 454
Score = 40.8 bits (94), Expect = 0.002
Identities = 47/147 (31%), Positives = 57/147 (38%), Gaps = 21/147 (14%)
Query: 38 APPPLPRIPDPRALPPTLFLPHFLGGD--------GPCLTPQPRAPAALPNRSLAVAGGT 89
+PP P P PP+L P P TP P+AP L L +A
Sbjct: 418 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPP 477
Query: 90 PRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSP-ATGPSGAQEV-PGPAAAL 147
P+ AP ++A P+ P+ F PS SP AT P A V P +
Sbjct: 478 PQ-APPALATPPLQALPSP--PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV 534
Query: 148 APSPAAAAGTEGASPDL-APLRPAAPG 173
PSP ASP L AP RP PG
Sbjct: 535 PPSPP-------ASPTLQAPRRPPTPG 554
Score = 37.0 bits (84), Expect = 0.024
Identities = 45/149 (30%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 33 PMVTTAPPPLPRIPDPRALPPTLF------LPHFLGGDGPCLTPQPRAPAALPNRS---- 82
PM +A PP P+ P P A PP P L P L P PA+ P ++
Sbjct: 451 PMSPSATPP-PQAPPPLAAPPLQLAKPPPQAPPALA--TPPLQALPSPPASFPGQAPFSP 507
Query: 83 LAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPG 142
A +P A P + V A+P Q+P P+L+ R P T P V G
Sbjct: 508 SASLPMSPLATPPP-QAPPVLAAPLLQVPPS----PPASPTLQAPRRPPT-PGPDTSVSG 561
Query: 143 PAAALA------PSPAAAAGTEGASPDLA 165
P LA P P+ + + + PDLA
Sbjct: 562 PRLTLALAPGPPPPPSRSPSSTLSGPDLA 590
Score = 34.7 bits (78), Expect = 0.12
Identities = 53/181 (29%), Positives = 64/181 (35%), Gaps = 37/181 (20%)
Query: 34 MVTTAPPPLPRIPDPRALPPTLF------------LPHFLGGDGPCLTPQPRAPAALPNR 81
++T PP PR P P P L L GG G P+ AP A P R
Sbjct: 24 LLTPRPPGSPR-PPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPES-APRAGPTR 81
Query: 82 SLA--VAGGTPRAAPKK-----------RRKKKVRASPAGQLPSRFHQYQQ--HRPSLEG 126
+ +G RA P K R R P GQ R + + E
Sbjct: 82 TSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEA 141
Query: 127 GRSPATGPSGAQEVPGPAAALAPSPAAA-----AGTEGASPDLAP-LRPAAPGQTPLRKE 180
+ A ++ GP PSPA A AGTE P AP RP P + P RK
Sbjct: 142 PKRSALSAGARRDTSGPTPG-TPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGP-RKS 199
Query: 181 V 181
V
Sbjct: 200 V 200
Score = 30.8 bits (68), Expect = 1.7
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 75 PAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGP 134
P + P RS A GTPRA + K P G R Q R +PA GP
Sbjct: 239 PLSSPARSGPSARGTPRAPAHPSQPK-----PKGLQALRPPQVTPPRKDA----APALGP 289
Query: 135 SGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAP 172
+ + P+ + PSP+A S P PA P
Sbjct: 290 LSSSPLATPSPSAPPSPSAP-----PSLQTLPSPPATP 322
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 43.1 bits (100), Expect = 3e-04
Identities = 48/168 (28%), Positives = 61/168 (36%), Gaps = 22/168 (13%)
Query: 31 ALPMVTT--APPPLPRIPDPRALPPTLFLPHFLGGDGPC----LTPQPRAPAALPNRSLA 84
A P++ T +PPP DP +PP + P GP + P P + L SL
Sbjct: 974 AAPILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLV 1033
Query: 85 VAGGTPRAAPKKRRKKKVRA--SPAGQLPSRFHQYQQHRPSLE---GGRSPATGPSGAQE 139
P V + SP G++ + + H E PA PS
Sbjct: 1034 PQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSP 1093
Query: 140 VPGPAAAL---APSPAAAAGT-EGASPDLAPL-------RPAAPGQTP 176
+P P L APSPA A G D APL PGQTP
Sbjct: 1094 LPSPMGDLSCPAPSPAPALDDFSGLGEDTAPLDGIDAPGSQPEPGQTP 1141
Score = 35.8 bits (81), Expect = 0.053
Identities = 40/169 (23%), Positives = 55/169 (32%), Gaps = 12/169 (7%)
Query: 40 PPLPRIPDPRALPPTLFLPHFLG-GDGPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRR 98
P L P+ L P PH + PCL+PQP P P +
Sbjct: 795 PHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPE 854
Query: 99 KKKVRASP--------AGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPS 150
+K SP GQ P+ + P E SP G E P + P
Sbjct: 855 LEKPPLSPRPEKPPEEPGQCPAP-EELPLFPPPGEPSLSPLLGEPALSEPGEPPLSPLPE 913
Query: 151 --PAAAAGTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGKSEKIALPHG 197
P + +G SP L P P P +P+ + ++ P G
Sbjct: 914 ELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYPFG 962
Score = 30.0 bits (66), Expect = 2.9
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 121 RPSLEGGRSPATGPSGAQEV-PGPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQTP 176
+P L G P TGP QE+ GP P A G P L P+ P P +P
Sbjct: 4260 QPQLGGFPGPQTGP--LQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPPSSP 4314
>gi|239743660 PREDICTED: hypothetical protein XP_002342926 [Homo
sapiens]
Length = 329
Score = 42.7 bits (99), Expect = 4e-04
Identities = 43/148 (29%), Positives = 58/148 (39%), Gaps = 43/148 (29%)
Query: 48 PRALPPTLFLPHFLGGDGPCLTPQPRA---------------PAALPNRSLAVAGGTPRA 92
PRA PP GG G TP P+A P+ P R L + PR
Sbjct: 207 PRAFPP--------GGPGDAGTPMPKAGGLRKRPGITRTEGNPSPRPPRRLTLPEDHPRL 258
Query: 93 APKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPA 152
A +RR+K+ A+ + RP+ + P GP G GPA ++ SPA
Sbjct: 259 ANARRRRKRALAT-------------RVRPAPQTSGRP--GPLG-----GPAISVVLSPA 298
Query: 153 AAAGTEGASPDLAPLRPAAPGQTPLRKE 180
+ A +G S R GQ P R +
Sbjct: 299 SQAPEKGWSQSRGGARLGPEGQEPGRDQ 326
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 42.4 bits (98), Expect = 6e-04
Identities = 45/156 (28%), Positives = 60/156 (38%), Gaps = 19/156 (12%)
Query: 39 PPPLPRIPDPRAL--PPTLFLPHF---LGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAA 93
PPP P + P AL LF P F P ++P P APAA P +V P
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLP-APAAFPPTPQSVPSPAPTPF 470
Query: 94 PKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAA 153
P + P G F S+ G+ PA P G + P A SP
Sbjct: 471 P-------IELLPLGYSEPAFGPCF----SMPRGKPPAPSPRGQKASPPTLAPATASPPT 519
Query: 154 AAGTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGKS 189
AG+ +P L L AA + L ++ S + +S
Sbjct: 520 TAGSN--NPCLTQLLTAAKPEQALEPPLVSSTLLRS 553
Score = 38.5 bits (88), Expect = 0.008
Identities = 45/173 (26%), Positives = 58/173 (33%), Gaps = 39/173 (22%)
Query: 2 TVVSVPQREPLVLGGRLAPLGFSSRGYFGALPMVTTAPPPLPRIPDPRALPPTL-----F 56
T SVP P L PLG+S FG + PP P +A PPTL
Sbjct: 458 TPQSVPSPAPTPFPIELLPLGYSEPA-FGPCFSMPRGKPPAPSPRGQKASPPTLAPATAS 516
Query: 57 LPHFLGGDGPCLT-------PQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQ 109
P G + PCLT P+ L + +L + G+P ++ V P
Sbjct: 517 PPTTAGSNNPCLTQLLTAAKPEQALEPPLVSSTLLRSPGSP--------QETVPEFPCTF 568
Query: 110 LPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASP 162
LP P P+ + PGPA P E SP
Sbjct: 569 LP------------------PTPAPTPPRPPPGPATLAPSRPLLVPKAERLSP 603
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 42.4 bits (98), Expect = 6e-04
Identities = 45/156 (28%), Positives = 60/156 (38%), Gaps = 19/156 (12%)
Query: 39 PPPLPRIPDPRAL--PPTLFLPHF---LGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAA 93
PPP P + P AL LF P F P ++P P APAA P +V P
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLP-APAAFPPTPQSVPSPAPTPF 470
Query: 94 PKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAA 153
P + P G F S+ G+ PA P G + P A SP
Sbjct: 471 P-------IELLPLGYSEPAFGPCF----SMPRGKPPAPSPRGQKASPPTLAPATASPPT 519
Query: 154 AAGTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGKS 189
AG+ +P L L AA + L ++ S + +S
Sbjct: 520 TAGSN--NPCLTQLLTAAKPEQALEPPLVSSTLLRS 553
Score = 38.5 bits (88), Expect = 0.008
Identities = 45/173 (26%), Positives = 58/173 (33%), Gaps = 39/173 (22%)
Query: 2 TVVSVPQREPLVLGGRLAPLGFSSRGYFGALPMVTTAPPPLPRIPDPRALPPTL-----F 56
T SVP P L PLG+S FG + PP P +A PPTL
Sbjct: 458 TPQSVPSPAPTPFPIELLPLGYSEPA-FGPCFSMPRGKPPAPSPRGQKASPPTLAPATAS 516
Query: 57 LPHFLGGDGPCLT-------PQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQ 109
P G + PCLT P+ L + +L + G+P ++ V P
Sbjct: 517 PPTTAGSNNPCLTQLLTAAKPEQALEPPLVSSTLLRSPGSP--------QETVPEFPCTF 568
Query: 110 LPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASP 162
LP P P+ + PGPA P E SP
Sbjct: 569 LP------------------PTPAPTPPRPPPGPATLAPSRPLLVPKAERLSP 603
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 42.4 bits (98), Expect = 6e-04
Identities = 45/156 (28%), Positives = 60/156 (38%), Gaps = 19/156 (12%)
Query: 39 PPPLPRIPDPRAL--PPTLFLPHF---LGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAA 93
PPP P + P AL LF P F P ++P P APAA P +V P
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLP-APAAFPPTPQSVPSPAPTPF 470
Query: 94 PKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAA 153
P + P G F S+ G+ PA P G + P A SP
Sbjct: 471 P-------IELLPLGYSEPAFGPCF----SMPRGKPPAPSPRGQKASPPTLAPATASPPT 519
Query: 154 AAGTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGKS 189
AG+ +P L L AA + L ++ S + +S
Sbjct: 520 TAGSN--NPCLTQLLTAAKPEQALEPPLVSSTLLRS 553
Score = 38.5 bits (88), Expect = 0.008
Identities = 45/173 (26%), Positives = 58/173 (33%), Gaps = 39/173 (22%)
Query: 2 TVVSVPQREPLVLGGRLAPLGFSSRGYFGALPMVTTAPPPLPRIPDPRALPPTL-----F 56
T SVP P L PLG+S FG + PP P +A PPTL
Sbjct: 458 TPQSVPSPAPTPFPIELLPLGYSEPA-FGPCFSMPRGKPPAPSPRGQKASPPTLAPATAS 516
Query: 57 LPHFLGGDGPCLT-------PQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQ 109
P G + PCLT P+ L + +L + G+P ++ V P
Sbjct: 517 PPTTAGSNNPCLTQLLTAAKPEQALEPPLVSSTLLRSPGSP--------QETVPEFPCTF 568
Query: 110 LPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASP 162
LP P P+ + PGPA P E SP
Sbjct: 569 LP------------------PTPAPTPPRPPPGPATLAPSRPLLVPKAERLSP 603
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 42.4 bits (98), Expect = 6e-04
Identities = 45/156 (28%), Positives = 60/156 (38%), Gaps = 19/156 (12%)
Query: 39 PPPLPRIPDPRAL--PPTLFLPHF---LGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAA 93
PPP P + P AL LF P F P ++P P APAA P +V P
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLP-APAAFPPTPQSVPSPAPTPF 470
Query: 94 PKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAA 153
P + P G F S+ G+ PA P G + P A SP
Sbjct: 471 P-------IELLPLGYSEPAFGPCF----SMPRGKPPAPSPRGQKASPPTLAPATASPPT 519
Query: 154 AAGTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGKS 189
AG+ +P L L AA + L ++ S + +S
Sbjct: 520 TAGSN--NPCLTQLLTAAKPEQALEPPLVSSTLLRS 553
Score = 38.5 bits (88), Expect = 0.008
Identities = 45/173 (26%), Positives = 58/173 (33%), Gaps = 39/173 (22%)
Query: 2 TVVSVPQREPLVLGGRLAPLGFSSRGYFGALPMVTTAPPPLPRIPDPRALPPTL-----F 56
T SVP P L PLG+S FG + PP P +A PPTL
Sbjct: 458 TPQSVPSPAPTPFPIELLPLGYSEPA-FGPCFSMPRGKPPAPSPRGQKASPPTLAPATAS 516
Query: 57 LPHFLGGDGPCLT-------PQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQ 109
P G + PCLT P+ L + +L + G+P ++ V P
Sbjct: 517 PPTTAGSNNPCLTQLLTAAKPEQALEPPLVSSTLLRSPGSP--------QETVPEFPCTF 568
Query: 110 LPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASP 162
LP P P+ + PGPA P E SP
Sbjct: 569 LP------------------PTPAPTPPRPPPGPATLAPSRPLLVPKAERLSP 603
>gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo
sapiens]
Length = 539
Score = 42.4 bits (98), Expect = 6e-04
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 66 PCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLE 125
P + P P+ +P S + TP AP R + P+ P+ Q++Q P
Sbjct: 331 PSTSYLPSTPSVVPASSYIPSSETP-PAPSSREASRPPEEPSAPSPTLPAQFKQRAPMYN 389
Query: 126 GGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRP--AAPGQTPLRKEV 181
G SPAT A P + L P+ A +P +A + P AP Q +K +
Sbjct: 390 SGLSPATPTPAA-----PTSPLTPTTPPAVAPTTQTPPVAMVAPQTQAPAQQQPKKNL 442
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 42.4 bits (98), Expect = 6e-04
Identities = 49/179 (27%), Positives = 68/179 (37%), Gaps = 34/179 (18%)
Query: 32 LPMVTTAPPP--------------LPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRAPAA 77
LP TA PP L ++ P +LPP P G P+ P+
Sbjct: 312 LPAAATASPPTSLLAPSTNPLLESLKKMQTPPSLPPC---PESAGAATTEALSPPKTPSL 368
Query: 78 LPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPS-G 136
LP L+ +G P P K + G +P+ PS+ P+
Sbjct: 369 LPPLGLSQSG-PPGLLPSPSFDSKPPTTLLGLIPA---------PSMVPATDTKAPPTLQ 418
Query: 137 AQEVPGPAAALAPSPAAAA----GTEGASPDLAPLRPAAPGQTPLRKEVLKSKMGKSEK 191
A+ P A APSPA GT+ SP +P PAA +P+ K + + KSEK
Sbjct: 419 AETATKPQATSAPSPAPKQSFLFGTQNTSPS-SPAAPAASSASPMFKPIFTAP-PKSEK 475
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.0 bits (97), Expect = 7e-04
Identities = 44/162 (27%), Positives = 57/162 (35%), Gaps = 7/162 (4%)
Query: 39 PPPLPRIPDP-RALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKR 97
PPP+P P P ++ P P GG +P P P NR A+ GG+ R +P
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGGPRQP-SPGPTPPPFPGNRGTALGGGSIRQSPLSS 242
Query: 98 RKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGT 157
P PSR + P G P+ A P P P P+ +
Sbjct: 243 SSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHRE-AVPPPPPQNNKPPVPSTPRPS 301
Query: 158 EGASPDLAPLRPAAPGQTPLRKEVLKSKMGKSEKIALPHGQL 199
+ P P+ PG PL S G E LP L
Sbjct: 302 ASSQAPPPPPPPSRPGPPPLP----PSSSGNDETPRLPQRNL 339
Score = 35.8 bits (81), Expect = 0.053
Identities = 40/149 (26%), Positives = 51/149 (34%), Gaps = 38/149 (25%)
Query: 39 PPPLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAA----- 93
PPP P P P LPP+ G TP+ LP R+L+++ TP
Sbjct: 309 PPPPPSRPGPPPLPPS--------SSGNDETPR------LPQRNLSLSSSTPPLPSPGRS 354
Query: 94 ------PKKRRKKKVRASP--AGQLP-----------SRFHQYQQHRPSLEGGRSPATGP 134
P +R VR P +G LP SR PS G SP +GP
Sbjct: 355 GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP 414
Query: 135 SGAQEVPGPAAALAPSPAAAAGTEGASPD 163
P+A P P + D
Sbjct: 415 RPPLPPDRPSAGAPPPPPPSTSIRNGFQD 443
Score = 33.1 bits (74), Expect = 0.35
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 27 GYFGALPMVTTAPPPLPRIPDP-RALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAV 85
G G LP PPP+ R RALP T LP G D P P+P P P+
Sbjct: 374 GRSGPLP----PPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS----- 424
Query: 86 AGGTPRAAPKKRRKKKVRASPA-GQLPSRFH 115
AG P P + + SP + SRF+
Sbjct: 425 AGAPPPPPPSTSIRNGFQDSPCEDEWESRFY 455
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.0 bits (97), Expect = 7e-04
Identities = 44/162 (27%), Positives = 57/162 (35%), Gaps = 7/162 (4%)
Query: 39 PPPLPRIPDP-RALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKR 97
PPP+P P P ++ P P GG +P P P NR A+ GG+ R +P
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGGPRQP-SPGPTPPPFPGNRGTALGGGSIRQSPLSS 242
Query: 98 RKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGT 157
P PSR + P G P+ A P P P P+ +
Sbjct: 243 SSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHRE-AVPPPPPQNNKPPVPSTPRPS 301
Query: 158 EGASPDLAPLRPAAPGQTPLRKEVLKSKMGKSEKIALPHGQL 199
+ P P+ PG PL S G E LP L
Sbjct: 302 ASSQAPPPPPPPSRPGPPPLP----PSSSGNDETPRLPQRNL 339
Score = 35.8 bits (81), Expect = 0.053
Identities = 40/149 (26%), Positives = 51/149 (34%), Gaps = 38/149 (25%)
Query: 39 PPPLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAA----- 93
PPP P P P LPP+ G TP+ LP R+L+++ TP
Sbjct: 309 PPPPPSRPGPPPLPPS--------SSGNDETPR------LPQRNLSLSSSTPPLPSPGRS 354
Query: 94 ------PKKRRKKKVRASP--AGQLP-----------SRFHQYQQHRPSLEGGRSPATGP 134
P +R VR P +G LP SR PS G SP +GP
Sbjct: 355 GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP 414
Query: 135 SGAQEVPGPAAALAPSPAAAAGTEGASPD 163
P+A P P + D
Sbjct: 415 RPPLPPDRPSAGAPPPPPPSTSIRNGFQD 443
Score = 33.1 bits (74), Expect = 0.35
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 27 GYFGALPMVTTAPPPLPRIPDP-RALPPTLFLPHFLGGDGPCLTPQPRAPAALPNRSLAV 85
G G LP PPP+ R RALP T LP G D P P+P P P+
Sbjct: 374 GRSGPLP----PPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPS----- 424
Query: 86 AGGTPRAAPKKRRKKKVRASPA-GQLPSRFH 115
AG P P + + SP + SRF+
Sbjct: 425 AGAPPPPPPSTSIRNGFQDSPCEDEWESRFY 455
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 42.0 bits (97), Expect = 7e-04
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 73 RAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPAT 132
R P+A + + A GTP + +ASPAG P R Q GR+
Sbjct: 13 RTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPG 72
Query: 133 GPSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQTPLRKEVLKS 184
S AQ P A+ SPA A+ + +S + R A+ +P R ++++
Sbjct: 73 RASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRA 124
>gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]
Length = 566
Score = 41.6 bits (96), Expect = 0.001
Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Query: 66 PCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLE 125
P L PQ AP L A G RA P R + P L + + Q P
Sbjct: 27 PLLGPQG-APPFLEEAPSASLPGAERATPPTREE------PGKGLTAEAAREQSGSPCRA 79
Query: 126 GGRSPATGP-------SGAQEVPGPAAALAPSPAAAAGTE 158
G SP TG +G +E PGP+ + +PSPA AG E
Sbjct: 80 AGVSPGTGGREGAEWRAGGREGPGPSPSPSPSPAKPAGAE 119
Score = 30.0 bits (66), Expect = 2.9
Identities = 53/168 (31%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 17 RLAPLGFSSRGYFGALPMVTTAPPP-LPRIPDPRALPPTLFLPHFLGGDGPCLTPQP-RA 74
RLA F G GA P + AP LP RA PPT P G LT + R
Sbjct: 20 RLAERVFPLLGPQGAPPFLEEAPSASLPGAE--RATPPTREEP------GKGLTAEAARE 71
Query: 75 PAALPNRSLAVAGGTP-------RAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGG 127
+ P R+ V+ GT RA ++ SP+ P++ + R LE
Sbjct: 72 QSGSPCRAAGVSPGTGGREGAEWRAGGREGPGPSPSPSPS---PAKPAGAELRRAFLERC 128
Query: 128 RSPATGPSGAQEVPGPAAALAP---SPAAAAGTEGASPDLAPLRPAAP 172
S P A+ PG AAA+A S A AA L PLR P
Sbjct: 129 LS---SPVSAESFPGGAAAVAAFSCSVAPAAAPTPGEQFLLPLRAPFP 173
>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
Length = 733
Score = 41.6 bits (96), Expect = 0.001
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 14/165 (8%)
Query: 15 GGRLAPLGFSSRGYFGALPMVTTA-PPPLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPR 73
GG AP G RG A P++ P P+ P P A PP+ G + T
Sbjct: 165 GGGYAPYGRPGRGLRAATPVIQACYPSPVGPPPPPAAEPPS-------GPEAAVNTHCAE 217
Query: 74 APAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATG 133
A+ P + A+ R +P ++ P P R ++ P + P+ G
Sbjct: 218 LYASGPGPAAALCASERRCSPLCGLDLSKKSPPGSAAPERPLAERELPPRPDS--PPSAG 275
Query: 134 PSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLR--PAAPGQTP 176
P+ +E P +L P P E A+P P R +PG P
Sbjct: 276 PAAYKEPPLALPSLPPLPFQK--LEEAAPPSDPFRGGSGSPGPEP 318
>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
Length = 714
Score = 41.6 bits (96), Expect = 0.001
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 14/165 (8%)
Query: 15 GGRLAPLGFSSRGYFGALPMVTTA-PPPLPRIPDPRALPPTLFLPHFLGGDGPCLTPQPR 73
GG AP G RG A P++ P P+ P P A PP+ G + T
Sbjct: 146 GGGYAPYGRPGRGLRAATPVIQACYPSPVGPPPPPAAEPPS-------GPEAAVNTHCAE 198
Query: 74 APAALPNRSLAVAGGTPRAAPKKRRKKKVRASPAGQLPSRFHQYQQHRPSLEGGRSPATG 133
A+ P + A+ R +P ++ P P R ++ P + P+ G
Sbjct: 199 LYASGPGPAAALCASERRCSPLCGLDLSKKSPPGSAAPERPLAERELPPRPDS--PPSAG 256
Query: 134 PSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPLR--PAAPGQTP 176
P+ +E P +L P P E A+P P R +PG P
Sbjct: 257 PAAYKEPPLALPSLPPLPFQK--LEEAAPPSDPFRGGSGSPGPEP 299
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,427,244
Number of Sequences: 37866
Number of extensions: 1068989
Number of successful extensions: 9751
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 898
Number of HSP's that attempted gapping in prelim test: 7294
Number of HSP's gapped (non-prelim): 2902
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.