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Search of human proteins with 57863248
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|57863248 zinc finger, CCHC domain containing 11 isoform a
[Homo sapiens]
(1645 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Ho... 3351 0.0
gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Ho... 3345 0.0
gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Ho... 3337 0.0
gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens] 618 e-176
gi|167555099 PAP associated domain containing 4 [Homo sapiens] 151 4e-36
gi|167555097 PAP associated domain containing 4 [Homo sapiens] 151 4e-36
gi|167555095 PAP associated domain containing 4 [Homo sapiens] 151 4e-36
gi|226371750 terminal uridylyl transferase 1, U6 snRNA-specific ... 114 6e-25
gi|190194365 PAP associated domain containing 1 [Homo sapiens] 97 1e-19
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 50 2e-05
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 50 2e-05
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 50 2e-05
gi|5902142 DNA polymerase sigma [Homo sapiens] 49 3e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 49 3e-05
gi|34101286 zinc finger RNA binding protein [Homo sapiens] 49 3e-05
gi|94536832 PAP associated domain containing 5 isoform b [Homo s... 48 9e-05
gi|94536834 PAP associated domain containing 5 isoform a [Homo s... 48 9e-05
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 47 2e-04
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 47 2e-04
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 47 2e-04
gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens] 46 3e-04
gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens] 46 3e-04
gi|55750053 atrophin-1 [Homo sapiens] 46 3e-04
gi|55750041 atrophin-1 [Homo sapiens] 46 3e-04
gi|83977459 pleckstrin homology-like domain, family A, member 1 ... 45 4e-04
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 45 4e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 45 6e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 45 6e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 45 6e-04
gi|239787762 SH2 domain protein 2A isoform 4 [Homo sapiens] 45 8e-04
>gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Homo
sapiens]
Length = 1645
Score = 3351 bits (8690), Expect = 0.0
Identities = 1645/1645 (100%), Positives = 1645/1645 (100%)
Query: 1 MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQ 60
MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQ
Sbjct: 1 MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQ 60
Query: 61 NDICIEKTEVKSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEK 120
NDICIEKTEVKSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEK
Sbjct: 61 NDICIEKTEVKSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEK 120
Query: 121 ATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQI 180
ATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQI
Sbjct: 121 ATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQI 180
Query: 181 GKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLS 240
GKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLS
Sbjct: 181 GKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLS 240
Query: 241 KMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYT 300
KMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYT
Sbjct: 241 KMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYT 300
Query: 301 NCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVI 360
NCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVI
Sbjct: 301 NCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVI 360
Query: 361 ELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP 420
ELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP
Sbjct: 361 ELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP 420
Query: 421 PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT 480
PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT
Sbjct: 421 PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT 480
Query: 481 DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 540
DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC
Sbjct: 481 DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 540
Query: 541 LLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKK 600
LLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKK
Sbjct: 541 LLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKK 600
Query: 601 TETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILT 660
TETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILT
Sbjct: 601 TETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILT 660
Query: 661 RENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQTKGGNKSTV 720
RENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQTKGGNKSTV
Sbjct: 661 RENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQTKGGNKSTV 720
Query: 721 DFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMDCTSQRCIIDN 780
DFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMDCTSQRCIIDN
Sbjct: 721 DFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMDCTSQRCIIDN 780
Query: 781 NNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK 840
NNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK
Sbjct: 781 NNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK 840
Query: 841 SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVF 900
SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVF
Sbjct: 841 SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVF 900
Query: 901 DKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFD 960
DKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFD
Sbjct: 901 DKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFD 960
Query: 961 ELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHE 1020
ELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHE
Sbjct: 961 ELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHE 1020
Query: 1021 NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQH 1080
NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQH
Sbjct: 1021 NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQH 1080
Query: 1081 NTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVI 1140
NTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVI
Sbjct: 1081 NTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVI 1140
Query: 1141 PVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEF 1200
PVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEF
Sbjct: 1141 PVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEF 1200
Query: 1201 DFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK 1260
DFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK
Sbjct: 1201 DFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK 1260
Query: 1261 LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRKSSLLFRLK 1320
LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRKSSLLFRLK
Sbjct: 1261 LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRKSSLLFRLK 1320
Query: 1321 KKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
KKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLAR
Sbjct: 1321 KKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
Query: 1381 QRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQ 1440
QRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQ
Sbjct: 1381 QRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQ 1440
Query: 1441 SAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQ 1500
SAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQ
Sbjct: 1441 SAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQ 1500
Query: 1501 IPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNS 1560
IPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNS
Sbjct: 1501 IPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNS 1560
Query: 1561 LVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPF 1620
LVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPF
Sbjct: 1561 LVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPF 1620
Query: 1621 YTQDRCATRRCRERCPHPPRGNVSE 1645
YTQDRCATRRCRERCPHPPRGNVSE
Sbjct: 1621 YTQDRCATRRCRERCPHPPRGNVSE 1645
>gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Homo
sapiens]
Length = 1644
Score = 3345 bits (8674), Expect = 0.0
Identities = 1644/1645 (99%), Positives = 1644/1645 (99%), Gaps = 1/1645 (0%)
Query: 1 MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQ 60
MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQ
Sbjct: 1 MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQ 60
Query: 61 NDICIEKTEVKSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEK 120
NDICIEKTEVKSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEK
Sbjct: 61 NDICIEKTEVKSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEK 120
Query: 121 ATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQI 180
ATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQI
Sbjct: 121 ATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQI 180
Query: 181 GKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLS 240
GKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLS
Sbjct: 181 GKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLS 240
Query: 241 KMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYT 300
KMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYT
Sbjct: 241 KMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYT 300
Query: 301 NCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVI 360
NCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVI
Sbjct: 301 NCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVI 360
Query: 361 ELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP 420
ELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP
Sbjct: 361 ELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP 420
Query: 421 PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT 480
PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT
Sbjct: 421 PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT 480
Query: 481 DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 540
DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC
Sbjct: 481 DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 540
Query: 541 LLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKK 600
LLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKK
Sbjct: 541 LLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKK 600
Query: 601 TETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILT 660
TETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILT
Sbjct: 601 TETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILT 660
Query: 661 RENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQTKGGNKSTV 720
RENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQTKGGNKSTV
Sbjct: 661 RENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQTKGGNKSTV 720
Query: 721 DFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMDCTSQRCIIDN 780
DFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMDCTSQRCIIDN
Sbjct: 721 DFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMDCTSQRCIIDN 780
Query: 781 NNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK 840
NNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK
Sbjct: 781 NNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK 840
Query: 841 SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVF 900
SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVF
Sbjct: 841 SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVF 900
Query: 901 DKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFD 960
DKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFD
Sbjct: 901 DKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFD 960
Query: 961 ELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHE 1020
ELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHE
Sbjct: 961 ELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHE 1020
Query: 1021 NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQH 1080
NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQH
Sbjct: 1021 NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQH 1080
Query: 1081 NTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVI 1140
NTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVI
Sbjct: 1081 NTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVI 1140
Query: 1141 PVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEF 1200
PVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEF
Sbjct: 1141 PVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEF 1200
Query: 1201 DFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK 1260
DFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK
Sbjct: 1201 DFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK 1260
Query: 1261 LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRKSSLLFRLK 1320
LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRK SLLFRLK
Sbjct: 1261 LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRK-SLLFRLK 1319
Query: 1321 KKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
KKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLAR
Sbjct: 1320 KKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1379
Query: 1381 QRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQ 1440
QRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQ
Sbjct: 1380 QRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQ 1439
Query: 1441 SAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQ 1500
SAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQ
Sbjct: 1440 SAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQ 1499
Query: 1501 IPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNS 1560
IPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNS
Sbjct: 1500 IPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNS 1559
Query: 1561 LVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPF 1620
LVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPF
Sbjct: 1560 LVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPF 1619
Query: 1621 YTQDRCATRRCRERCPHPPRGNVSE 1645
YTQDRCATRRCRERCPHPPRGNVSE
Sbjct: 1620 YTQDRCATRRCRERCPHPPRGNVSE 1644
>gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Homo
sapiens]
Length = 1640
Score = 3337 bits (8652), Expect = 0.0
Identities = 1640/1645 (99%), Positives = 1640/1645 (99%), Gaps = 5/1645 (0%)
Query: 1 MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQ 60
MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQ
Sbjct: 1 MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQ 60
Query: 61 NDICIEKTEVKSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEK 120
NDICIEKTEVKSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEK
Sbjct: 61 NDICIEKTEVKSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEK 120
Query: 121 ATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQI 180
ATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQI
Sbjct: 121 ATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQI 180
Query: 181 GKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLS 240
GKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLS
Sbjct: 181 GKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSASGIEDVSDDLS 240
Query: 241 KMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYT 300
KMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYT
Sbjct: 241 KMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDHIFRLEKRSPEYT 300
Query: 301 NCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVI 360
NCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVI
Sbjct: 301 NCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPAHLAALSVAVI 360
Query: 361 ELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP 420
ELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP
Sbjct: 361 ELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP 420
Query: 421 PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT 480
PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT
Sbjct: 421 PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTT 480
Query: 481 DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 540
DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC
Sbjct: 481 DLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPC 540
Query: 541 LLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKK 600
LLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKK
Sbjct: 541 LLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKK 600
Query: 601 TETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILT 660
TETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILT
Sbjct: 601 TETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILT 660
Query: 661 RENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQTKGGNKSTV 720
RENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQTKGGNKSTV
Sbjct: 661 RENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERFRAAYRYFACPQTKGGNKSTV 720
Query: 721 DFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMDCTSQRCIIDN 780
DFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMDCTSQRCIIDN
Sbjct: 721 DFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMDCTSQRCIIDN 780
Query: 781 NNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK 840
NNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK
Sbjct: 781 NNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK 840
Query: 841 SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVF 900
SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVF
Sbjct: 841 SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVF 900
Query: 901 DKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFD 960
DKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFD
Sbjct: 901 DKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFD 960
Query: 961 ELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHE 1020
ELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHE
Sbjct: 961 ELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHE 1020
Query: 1021 NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQH 1080
NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQH
Sbjct: 1021 NAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQH 1080
Query: 1081 NTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVI 1140
NTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVI
Sbjct: 1081 NTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVI 1140
Query: 1141 PVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEF 1200
PVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEF
Sbjct: 1141 PVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEF 1200
Query: 1201 DFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK 1260
DFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK
Sbjct: 1201 DFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK 1260
Query: 1261 LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRKSSLLFRLK 1320
LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRK RLK
Sbjct: 1261 LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRK-----RLK 1315
Query: 1321 KKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
KKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLAR
Sbjct: 1316 KKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1375
Query: 1381 QRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQ 1440
QRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQ
Sbjct: 1376 QRNSSVAAAQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQ 1435
Query: 1441 SAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQ 1500
SAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQ
Sbjct: 1436 SAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQ 1495
Query: 1501 IPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNS 1560
IPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNS
Sbjct: 1496 IPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNS 1555
Query: 1561 LVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPF 1620
LVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPF
Sbjct: 1556 LVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPF 1615
Query: 1621 YTQDRCATRRCRERCPHPPRGNVSE 1645
YTQDRCATRRCRERCPHPPRGNVSE
Sbjct: 1616 YTQDRCATRRCRERCPHPPRGNVSE 1640
>gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens]
Length = 1495
Score = 618 bits (1593), Expect = e-176
Identities = 316/540 (58%), Positives = 383/540 (70%), Gaps = 53/540 (9%)
Query: 887 DDDNLPTQE--LYYVFDKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMT 944
++ N P + +Y F K I T GK PT+VCS+CK++GH K DCPEDF++I L+PLPP+T
Sbjct: 935 EEKNSPVDQSDFFYEFSKLIFTKGKSPTVVCSLCKREGHLKKDCPEDFKRIQLEPLPPLT 994
Query: 945 NRFREILDLVCKRCFDELSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFG 1004
+F ILD VC +C+ + SP E RE I LE FI++++ +L LFGSSKNGFG
Sbjct: 995 PKFLNILDQVCIQCYKDFSPTIIEDQAREHIRQNLESFIRQDFPG-TKLSLFGSSKNGFG 1053
Query: 1005 FRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRR 1064
F+ SDLD+CMT+ G E AE L+C IE LA++L++H GLRNILPITTAKVPIVKF H R
Sbjct: 1054 FKQSDLDVCMTINGLETAEGLDCVRTIEELARVLRKHSGLRNILPITTAKVPIVKFFHLR 1113
Query: 1065 SGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAY 1124
SGLE DISLYNTLA HNTR+L+ Y+AIDPRV+YL YTMKVF K CDIGDASRGSLSSYAY
Sbjct: 1114 SGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAY 1173
Query: 1125 ILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTES 1184
LMVLYFLQQR PPVIPVLQEI+ G++ P+ VDGWN +FFD+ +EL GKNTES
Sbjct: 1174 TLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELPTYWSECGKNTES 1233
Query: 1185 LGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVS 1244
+G+LWLGLLRFYTEEFDFKE+VISIR+K LLTTF+KQWTSK I IEDPFDLNHNLGAG+S
Sbjct: 1234 VGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLS 1293
Query: 1245 RKMTNFIMKAFINGRKLFGTPF------YPLIGREAEYFFDSRVLTDGELAPNDRCCRVC 1298
RKMTNFIMKAFINGR++FG P YP + EYFFD VLT+GELAPNDRCCR+C
Sbjct: 1294 RKMTNFIMKAFINGRRVFGIPVKGFPKDYP---SKMEYFFDPDVLTEGELAPNDRCCRIC 1350
Query: 1299 GKIGHYMKDCPKRKSSLLFR------------LKKKDSEEEKEGN--------------- 1331
GKIGH+MKDCP R+ R K+K S+E+KE +
Sbjct: 1351 GKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTEREVSTKEDKP 1410
Query: 1332 -----EEEKDSRDVLD---------PRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVK 1377
++ K R D P + +D +D R+ RCFICG GH+++ECP+ K
Sbjct: 1411 IQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKECPQFK 1470
Score = 464 bits (1194), Expect = e-130
Identities = 256/566 (45%), Positives = 358/566 (63%), Gaps = 34/566 (6%)
Query: 214 KQQTCTDNTGDSDDSASGIEDVSDDLSKMKNDESNKENSSEMDYLENATVIDESALTPEQ 273
K T + T + + +G + S+ + + +E D VIDES L+ ++
Sbjct: 157 KDLTSLETTSEME---AGSPENKKQRSRPRKPRKTRNEENEQDGDLEGPVIDESVLSTKE 213
Query: 274 RLGLKQAEERLERDHIFRLEKRSPEYTNCRYLCKLCLIHIENIQGAHKHIKEKRHKKNIL 333
LGL+QAEERL+RD I RL++R Y +Y C+LC + IE+I AHKHIKEKRHKKNI
Sbjct: 214 LLGLQQAEERLKRDCIDRLKRRPRNYPTAKYTCRLCDVLIESIAFAHKHIKEKRHKKNIK 273
Query: 334 EKQEESELRSLPPPSPAHLAALSVAVIELAKEHGITDDDLRVRQEIVEEMSKVITTFLPE 393
EKQEE L +LPPP+P+ + A+ +A+ ++ +E G+ +++L R EI M V LP+
Sbjct: 274 EKQEEELLTTLPPPTPSQINAVGIAIDKVVQEFGLHNENLEQRLEIKRIMENVFQHKLPD 333
Query: 394 CSLRLYGSSLTRFALKSSDVNIDIKFPPKMNHPDLLIKVLGILKKNVLYVDVESDFHAKV 453
CSLRLYGSS +R K+SDVNIDI+FP M+ PD+L+ V LK + ++DV++DFHA+V
Sbjct: 334 CSLRLYGSSCSRLGFKNSDVNIDIQFPAIMSQPDVLLLVQECLKNSDSFIDVDADFHARV 393
Query: 454 PVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQT 513
PVVVCR+++SGLLC+VSAGN+ ACLTT LTALGK+EP +PLV+AFRYWAKLC ID
Sbjct: 394 PVVVCREKQSGLLCKVSAGNENACLTTKHLTALGKLEPKLVPLVIAFRYWAKLCSIDRPE 453
Query: 514 DGGIPSYCFALMVMFFLQQRKPPLLPCLLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECN 573
+GG+P Y FALM +FFLQQRK PLLP LGSWIEGF ++ +F L+ I E+ V WE
Sbjct: 454 EGGLPPYVFALMAIFFLQQRKEPLLPVYLGSWIEGFSLSKLGNFNLQDI-EKDVVIWEHT 512
Query: 574 SSSATEKNSIAEENKAKADQPKDDTKKTETDNQSNAMKEKHGKSPLALETPNR--VSLGQ 631
S+A + EE A + P K G+ L L+ ++ V +GQ
Sbjct: 513 DSAAGDTGITKEE--APRETP-----------------IKRGQVSLILDVKHQPSVPVGQ 553
Query: 632 LWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKRRIAIEDPFSVKRNVARSLNSQL 691
LW+ELL+FY L+F L + VI +R++++++RE K+WPK+RIAIEDP+SVKRNVAR+LNSQ
Sbjct: 554 LWVELLRFYALEFNLADLVISIRVKELVSRELKDWPKKRIAIEDPYSVKRNVARTLNSQP 613
Query: 692 VYEYVVERFRAAYRYFACPQ--TKGGNKSTVD----FKKREKGKISNKKPVKSNNMATNG 745
V+EY++ R Y+YFA P TK ++ + K I++ V++ +
Sbjct: 614 VFEYILHCLRTTYKYFALPHKITKSSLLKPLNAITCISEHSKEVINHHPDVQTKDDKLKN 673
Query: 746 CILL---GETTEKINAEREQPVQCDE 768
+L G T+ N + QP+ E
Sbjct: 674 SVLAQGPGATSSAANTCKVQPLTLKE 699
Score = 110 bits (274), Expect = 1e-23
Identities = 99/378 (26%), Positives = 167/378 (44%), Gaps = 40/378 (10%)
Query: 919 KKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFDELSPPCSEQHNREQILIG 978
K+ H KN + ++ L LPP T + + + E R +I
Sbjct: 264 KEKRHKKNIKEKQEEEL-LTTLPPPTPSQINAVGIAIDKVVQEFGLHNENLEQRLEIKRI 322
Query: 979 LEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKIL 1038
+E Q + + L L+GSS + GF++SD++I + ++ +++ + + L
Sbjct: 323 MENVFQHKLPD-CSLRLYGSSCSRLGFKNSDVNIDIQFPAI-----MSQPDVLLLVQECL 376
Query: 1039 KRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYL 1098
K ++ A+VP+V ++SGL +S N A T+ L ++P++ L
Sbjct: 377 KNSDSFIDVDADFHARVPVVVCREKQSGLLCKVSAGNENACLTTKHLTALGKLEPKLVPL 436
Query: 1099 GYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVIPV-LQEIFDGKQIPQRMV 1157
+ +AK C I G L Y + LM ++FLQQRK P++PV L +G + + +
Sbjct: 437 VIAFRYWAKLCSIDRPEEGGLPPYVFALMAIFFLQQRKEPLLPVYLGSWIEGFSLSK--L 494
Query: 1158 DGWNAFFFDK-----------------TEELKKRLPSLGKNTESL------------GEL 1188
+N +K T+E R + + SL G+L
Sbjct: 495 GNFNLQDIEKDVVIWEHTDSAAGDTGITKEEAPRETPIKRGQVSLILDVKHQPSVPVGQL 554
Query: 1189 WLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGV-SRKM 1247
W+ LLRFY EF+ + VISIR K+L++ K W K IAIEDP+ + N+ + S+ +
Sbjct: 555 WVELLRFYALEFNLADLVISIRVKELVSRELKDWPKKRIAIEDPYSVKRNVARTLNSQPV 614
Query: 1248 TNFIMKAFINGRKLFGTP 1265
+I+ K F P
Sbjct: 615 FEYILHCLRTTYKYFALP 632
Score = 100 bits (248), Expect = 2e-20
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 29/329 (8%)
Query: 222 TGDSDDSASGIEDVSDDLSKMKNDESNKENSSEMDYLE----NATVIDESALTPEQRLGL 277
TG D+ A ED D+L + E KE ++ N + E + E+ +
Sbjct: 884 TGSGDEDALSEED--DELGEAAKYEDVKECGKHVERALLVELNKISLKEENVCEEKNSPV 941
Query: 278 KQAEERLERDHIFRLEKRSPEYTNCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQE 337
Q++ E + + +SP +C LC +E KK+ E +
Sbjct: 942 DQSDFFYEFSKLIFTKGKSPTV-----VCSLCK-------------REGHLKKDCPEDFK 983
Query: 338 ESELRSLPPPSPAHLAALSVAVIELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLR 397
+L LPP +P L L I+ K+ T + + R+ I + + I P L
Sbjct: 984 RIQLEPLPPLTPKFLNILDQVCIQCYKDFSPTIIEDQAREHIRQNLESFIRQDFPGTKLS 1043
Query: 398 LYGSSLTRFALKSSDVNI-----DIKFPPKMNHPDLLIKVLGILKKNVLYVDVESDFHAK 452
L+GSS F K SD+++ ++ ++ + ++ +L+K+ ++ AK
Sbjct: 1044 LFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLRKHSGLRNILPITTAK 1103
Query: 453 VPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQ 512
VP+V +SGL +S N +A T LL+A I+P L + + K+C I
Sbjct: 1104 VPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDA 1163
Query: 513 TDGGIPSYCFALMVMFFLQQRKPPLLPCL 541
+ G + SY + LMV++FLQQR PP++P L
Sbjct: 1164 SRGSLSSYAYTLMVLYFLQQRNPPVIPVL 1192
Score = 68.6 bits (166), Expect = 5e-11
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 625 NRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKRRIAIEDPFSVKRNVA 684
N S+GQLWL LL+FYT +F +E+VI +R + +LT K W + I IEDPF + N+
Sbjct: 1230 NTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLG 1289
Query: 685 RSLNSQLVYEYVVERFRAAYRYFACP 710
L+ ++ ++++ F R F P
Sbjct: 1290 AGLSRKMT-NFIMKAFINGRRVFGIP 1314
Score = 31.2 bits (69), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 1355 PRDLRCFICGDAGHVRRECPEVKLARQR 1382
P D C ICG GH ++CP + R+R
Sbjct: 1342 PNDRCCRICGKIGHFMKDCPMRRKVRRR 1369
>gi|167555099 PAP associated domain containing 4 [Homo sapiens]
Length = 484
Score = 151 bits (382), Expect = 4e-36
Identities = 119/395 (30%), Positives = 191/395 (48%), Gaps = 36/395 (9%)
Query: 885 LNDDDNLPTQELYYVFDKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMT 944
L+D+ NLP F + + PT+V I G + P F + +
Sbjct: 78 LSDEKNLPLDGKRQRFH----SPHQEPTVVNQIVPLSGERRYSMPPLFHTHYVPDIVRCV 133
Query: 945 NRFREIL-----DLVCKRCFDELSPP-------CSEQ----HNREQILIGLEKFIQKEYD 988
FREI ++ D+LS C +Q +E L++ IQ +
Sbjct: 134 PPFREIAFLEPREITLPEAKDKLSQQILELFETCQQQISDLKKKELCRTQLQREIQLLFP 193
Query: 989 EKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRH-----PG 1043
+ +RL L GSS NGFG R SD D+C+ ++ ++N K ++ ++ +H G
Sbjct: 194 Q-SRLFLVGSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSG 252
Query: 1044 LRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMK 1103
+ AKVPIVKF + S +E D+++ N + NT +L TYA ++ RV+ L +K
Sbjct: 253 YIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIK 312
Query: 1104 VFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAF 1163
+A I DASRG+LSSY+ +LMVL++LQ P++P LQ+I+ P A
Sbjct: 313 KWASHHQINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYPESFSP--------AI 364
Query: 1164 FFDKTEELKKRLPS-LGKNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEK-Q 1221
+ +P L KN +LG+L LG L++Y EFD+ +IS+R+ K + + +
Sbjct: 365 QLHLVHQAPCNVPPYLSKNESNLGDLLLGFLKYYATEFDWNSQMISVREAKAIPRPDGIE 424
Query: 1222 WTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFI 1256
W +K I +E+PFD + A ++ + I F+
Sbjct: 425 WRNKYICVEEPFDGTNTARAVHEKQKFDMIKDQFL 459
Score = 82.0 bits (201), Expect = 4e-15
Identities = 88/357 (24%), Positives = 145/357 (40%), Gaps = 65/357 (18%)
Query: 355 LSVAVIELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVN 414
LS ++EL + DL+ ++ ++ + I P+ L L GSSL F +SSD +
Sbjct: 156 LSQQILELFETCQQQISDLKKKELCRTQLQREIQLLFPQSRLFLVGSSLNGFGTRSSDGD 215
Query: 415 ID--IKFPP---KMNHPDLLIKVLGILKKNVL-----YVDVESDFHAKVPVVVCRDRKSG 464
+ +K P ++N +L ++ K+ Y++ AKVP+V RD+ S
Sbjct: 216 LCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLIRAKVPIVKFRDKVSC 275
Query: 465 LLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFAL 524
+ ++ N + T LL +E PLVL + WA I+ + G + SY L
Sbjct: 276 VEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHQINDASRGTLSSYSLVL 335
Query: 525 MVMFFLQQRKPPLLPCLLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIA 584
MV+ +LQ P+LP L + E F P QL + + CN K
Sbjct: 336 MVLHYLQTLPEPILPSLQKIYPESFSPA----IQLHLVHQA-----PCNVPPYLSK---- 382
Query: 585 EENKAKADQPKDDTKKTETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDF 644
N+SN LG L L LK+Y +F
Sbjct: 383 --------------------NESN--------------------LGDLLLGFLKYYATEF 402
Query: 645 ALEEYVICVRIQDILTR-ENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERF 700
+I VR + R + W + I +E+PF N AR+++ + ++ + ++F
Sbjct: 403 DWNSQMISVREAKAIPRPDGIEWRNKYICVEEPFD-GTNTARAVHEKQKFDMIKDQF 458
>gi|167555097 PAP associated domain containing 4 [Homo sapiens]
Length = 484
Score = 151 bits (382), Expect = 4e-36
Identities = 119/395 (30%), Positives = 191/395 (48%), Gaps = 36/395 (9%)
Query: 885 LNDDDNLPTQELYYVFDKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMT 944
L+D+ NLP F + + PT+V I G + P F + +
Sbjct: 78 LSDEKNLPLDGKRQRFH----SPHQEPTVVNQIVPLSGERRYSMPPLFHTHYVPDIVRCV 133
Query: 945 NRFREIL-----DLVCKRCFDELSPP-------CSEQ----HNREQILIGLEKFIQKEYD 988
FREI ++ D+LS C +Q +E L++ IQ +
Sbjct: 134 PPFREIAFLEPREITLPEAKDKLSQQILELFETCQQQISDLKKKELCRTQLQREIQLLFP 193
Query: 989 EKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRH-----PG 1043
+ +RL L GSS NGFG R SD D+C+ ++ ++N K ++ ++ +H G
Sbjct: 194 Q-SRLFLVGSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSG 252
Query: 1044 LRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMK 1103
+ AKVPIVKF + S +E D+++ N + NT +L TYA ++ RV+ L +K
Sbjct: 253 YIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIK 312
Query: 1104 VFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAF 1163
+A I DASRG+LSSY+ +LMVL++LQ P++P LQ+I+ P A
Sbjct: 313 KWASHHQINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYPESFSP--------AI 364
Query: 1164 FFDKTEELKKRLPS-LGKNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEK-Q 1221
+ +P L KN +LG+L LG L++Y EFD+ +IS+R+ K + + +
Sbjct: 365 QLHLVHQAPCNVPPYLSKNESNLGDLLLGFLKYYATEFDWNSQMISVREAKAIPRPDGIE 424
Query: 1222 WTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFI 1256
W +K I +E+PFD + A ++ + I F+
Sbjct: 425 WRNKYICVEEPFDGTNTARAVHEKQKFDMIKDQFL 459
Score = 82.0 bits (201), Expect = 4e-15
Identities = 88/357 (24%), Positives = 145/357 (40%), Gaps = 65/357 (18%)
Query: 355 LSVAVIELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVN 414
LS ++EL + DL+ ++ ++ + I P+ L L GSSL F +SSD +
Sbjct: 156 LSQQILELFETCQQQISDLKKKELCRTQLQREIQLLFPQSRLFLVGSSLNGFGTRSSDGD 215
Query: 415 ID--IKFPP---KMNHPDLLIKVLGILKKNVL-----YVDVESDFHAKVPVVVCRDRKSG 464
+ +K P ++N +L ++ K+ Y++ AKVP+V RD+ S
Sbjct: 216 LCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLIRAKVPIVKFRDKVSC 275
Query: 465 LLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFAL 524
+ ++ N + T LL +E PLVL + WA I+ + G + SY L
Sbjct: 276 VEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHQINDASRGTLSSYSLVL 335
Query: 525 MVMFFLQQRKPPLLPCLLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIA 584
MV+ +LQ P+LP L + E F P QL + + CN K
Sbjct: 336 MVLHYLQTLPEPILPSLQKIYPESFSPA----IQLHLVHQA-----PCNVPPYLSK---- 382
Query: 585 EENKAKADQPKDDTKKTETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDF 644
N+SN LG L L LK+Y +F
Sbjct: 383 --------------------NESN--------------------LGDLLLGFLKYYATEF 402
Query: 645 ALEEYVICVRIQDILTR-ENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERF 700
+I VR + R + W + I +E+PF N AR+++ + ++ + ++F
Sbjct: 403 DWNSQMISVREAKAIPRPDGIEWRNKYICVEEPFD-GTNTARAVHEKQKFDMIKDQF 458
>gi|167555095 PAP associated domain containing 4 [Homo sapiens]
Length = 484
Score = 151 bits (382), Expect = 4e-36
Identities = 119/395 (30%), Positives = 191/395 (48%), Gaps = 36/395 (9%)
Query: 885 LNDDDNLPTQELYYVFDKFILTSGKPPTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMT 944
L+D+ NLP F + + PT+V I G + P F + +
Sbjct: 78 LSDEKNLPLDGKRQRFH----SPHQEPTVVNQIVPLSGERRYSMPPLFHTHYVPDIVRCV 133
Query: 945 NRFREIL-----DLVCKRCFDELSPP-------CSEQ----HNREQILIGLEKFIQKEYD 988
FREI ++ D+LS C +Q +E L++ IQ +
Sbjct: 134 PPFREIAFLEPREITLPEAKDKLSQQILELFETCQQQISDLKKKELCRTQLQREIQLLFP 193
Query: 989 EKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRH-----PG 1043
+ +RL L GSS NGFG R SD D+C+ ++ ++N K ++ ++ +H G
Sbjct: 194 Q-SRLFLVGSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSG 252
Query: 1044 LRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMK 1103
+ AKVPIVKF + S +E D+++ N + NT +L TYA ++ RV+ L +K
Sbjct: 253 YIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIK 312
Query: 1104 VFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAF 1163
+A I DASRG+LSSY+ +LMVL++LQ P++P LQ+I+ P A
Sbjct: 313 KWASHHQINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYPESFSP--------AI 364
Query: 1164 FFDKTEELKKRLPS-LGKNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEK-Q 1221
+ +P L KN +LG+L LG L++Y EFD+ +IS+R+ K + + +
Sbjct: 365 QLHLVHQAPCNVPPYLSKNESNLGDLLLGFLKYYATEFDWNSQMISVREAKAIPRPDGIE 424
Query: 1222 WTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFI 1256
W +K I +E+PFD + A ++ + I F+
Sbjct: 425 WRNKYICVEEPFDGTNTARAVHEKQKFDMIKDQFL 459
Score = 82.0 bits (201), Expect = 4e-15
Identities = 88/357 (24%), Positives = 145/357 (40%), Gaps = 65/357 (18%)
Query: 355 LSVAVIELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVN 414
LS ++EL + DL+ ++ ++ + I P+ L L GSSL F +SSD +
Sbjct: 156 LSQQILELFETCQQQISDLKKKELCRTQLQREIQLLFPQSRLFLVGSSLNGFGTRSSDGD 215
Query: 415 ID--IKFPP---KMNHPDLLIKVLGILKKNVL-----YVDVESDFHAKVPVVVCRDRKSG 464
+ +K P ++N +L ++ K+ Y++ AKVP+V RD+ S
Sbjct: 216 LCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLIRAKVPIVKFRDKVSC 275
Query: 465 LLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFAL 524
+ ++ N + T LL +E PLVL + WA I+ + G + SY L
Sbjct: 276 VEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHQINDASRGTLSSYSLVL 335
Query: 525 MVMFFLQQRKPPLLPCLLGSWIEGFDPKRMDDFQLKGIVEEKFVKWECNSSSATEKNSIA 584
MV+ +LQ P+LP L + E F P QL + + CN K
Sbjct: 336 MVLHYLQTLPEPILPSLQKIYPESFSPA----IQLHLVHQA-----PCNVPPYLSK---- 382
Query: 585 EENKAKADQPKDDTKKTETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKFYTLDF 644
N+SN LG L L LK+Y +F
Sbjct: 383 --------------------NESN--------------------LGDLLLGFLKYYATEF 402
Query: 645 ALEEYVICVRIQDILTR-ENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERF 700
+I VR + R + W + I +E+PF N AR+++ + ++ + ++F
Sbjct: 403 DWNSQMISVREAKAIPRPDGIEWRNKYICVEEPFD-GTNTARAVHEKQKFDMIKDQF 458
>gi|226371750 terminal uridylyl transferase 1, U6 snRNA-specific [Homo
sapiens]
Length = 912
Score = 114 bits (286), Expect = 6e-25
Identities = 85/255 (33%), Positives = 137/255 (53%), Gaps = 26/255 (10%)
Query: 1007 DSDLDICMTLEGHENAEKLNCKEIIENLAKILKRH-PGLRNILPITTAKVPIVKFEHRRS 1065
+ DL L EK ++E + IL+ PG+ + + +A+ P+VKF HR S
Sbjct: 355 EGDLGKASELAETPKEEKAEGAAMLELVGSILRGCVPGVYRVQTVPSARRPVVKFCHRPS 414
Query: 1066 GLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYI 1125
GL GD+SL N LA HN+R L+ + +D RV+ L YT++ +A+ + S LS+YA
Sbjct: 415 GLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGL-SGSGPLLSNYALT 473
Query: 1126 LMVLYFLQQRKPPVIPVL----QEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKN 1181
L+V+YFLQ R PPV+P + Q+ +G+Q+ VDGW+ F L+ PS+ N
Sbjct: 474 LLVIYFLQTRDPPVLPTVSQLTQKAGEGEQVE---VDGWDCSFPRDASRLE---PSI--N 525
Query: 1182 TESLGELWLGLLRFYT--EEFDFKEYVISIRQKKLLTTF----EKQWTSKCIA---IEDP 1232
E L L L +F++ +D + ++S+R+ + L W + ++DP
Sbjct: 526 VEPLSSL---LAQFFSCVSCWDLRGSLLSLREGQALPVAGGLPSNLWEGLRLGPLNLQDP 582
Query: 1233 FDLNHNLGAGVSRKM 1247
FDL+HN+ A V+ ++
Sbjct: 583 FDLSHNVAANVTSRV 597
Score = 45.8 bits (107), Expect = 3e-04
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 451 AKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYID 510
A+ PVV R SGL VS N +A + L+ +++ PLV R WA+ +
Sbjct: 402 ARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGL- 460
Query: 511 SQTDGGIPSYCFALMVMFFLQQRKPPLLP 539
S + + +Y L+V++FLQ R PP+LP
Sbjct: 461 SGSGPLLSNYALTLLVIYFLQTRDPPVLP 489
Score = 35.4 bits (80), Expect = 0.46
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 318 GAHKHIKEKRHKKNILEKQEESELRSLPPPSP-----AHLAALSVAVIELAKEHGITDDD 372
G H+ R +K +S + P A A + +I+L +++ +
Sbjct: 155 GGHRLRVRPREQKEFQSPASKSPKGAAPDSHQLAKALAEAADVGAQMIKLVGLRELSEAE 214
Query: 373 LRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNI 415
++R +V M +V T F P C + +GSS+ F + D+++
Sbjct: 215 RQLRSLVVALMQEVFTEFFPGCVVHPFGSSINSFDVHGCDLDL 257
>gi|190194365 PAP associated domain containing 1 [Homo sapiens]
Length = 582
Score = 97.1 bits (240), Expect = 1e-19
Identities = 75/273 (27%), Positives = 140/273 (51%), Gaps = 33/273 (12%)
Query: 996 FGSSKNGFGFRDSDLDICMTLEGHEN--------------------AEKLNCKEIIENLA 1035
FGSS N FG DLD+ + L+ N +E++ ++I+ L
Sbjct: 230 FGSSVNTFGKLGCDLDMFLDLDETRNLSAHKISGNFLMEFQVKNVPSERIATQKILSVLG 289
Query: 1036 KILKRH-PGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPR 1094
+ L PG + I A+ P+V+F H+ SG + D++ N +A ++ +L Y A+D R
Sbjct: 290 ECLDHFGPGCVGVQKILNARCPLVRFSHQASGFQCDLTTNNRIALTSSELLYIYGALDSR 349
Query: 1095 VQYLGYTMKVFAKRCDIGDASRGS-LSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIP 1153
V+ L ++++ +A+ + + G+ +++++ +MV++FLQ+R PP++P L +
Sbjct: 350 VRALVFSVRCWARAHSLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTLDSLKTLADAE 409
Query: 1154 QR-MVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWLGLLRFYTEEFDFKEYVISIRQK 1212
+ +++G N F +L + PS +NTE+L EL L Y F F + I+IRQ
Sbjct: 410 DKCVIEGNNCTF---VRDLSRIKPS--QNTETL-ELLLKEFFEYFGNFAFDKNSINIRQG 463
Query: 1213 KLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSR 1245
+ + + S + I++PF+ + N+ VS+
Sbjct: 464 R----EQNKPDSSPLYIQNPFETSLNISKNVSQ 492
Score = 71.2 bits (173), Expect = 8e-12
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 362 LAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDV-------- 413
L KE +T+++ ++R + + + P+C +R +GSS+ F D+
Sbjct: 193 LLKEFQLTEENTKLRYLTCSLIEDMAAAYFPDCIVRPFGSSVNTFGKLGCDLDMFLDLDE 252
Query: 414 -----------NIDIKFPPKMNHPDLLI---KVLGILKKNVLY-----VDVESDFHAKVP 454
N ++F K N P I K+L +L + + + V V+ +A+ P
Sbjct: 253 TRNLSAHKISGNFLMEFQVK-NVPSERIATQKILSVLGECLDHFGPGCVGVQKILNARCP 311
Query: 455 VVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYIDSQTD 514
+V + SG C ++ N +A +++LL G ++ LV + R WA+ + S
Sbjct: 312 LVRFSHQASGFQCDLTTNNRIALTSSELLYIYGALDSRVRALVFSVRCWARAHSLTSSIP 371
Query: 515 GG-IPSYCFALMVMFFLQQRKPPLLPCL 541
G I ++ +MV+FFLQ+R PP+LP L
Sbjct: 372 GAWITNFSLTMMVIFFLQRRSPPILPTL 399
>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
Length = 1173
Score = 49.7 bits (117), Expect = 2e-05
Identities = 95/447 (21%), Positives = 177/447 (39%), Gaps = 54/447 (12%)
Query: 7 LKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQNDICIE 66
LKS E KK + V Q++ +K + E+ N N N + +NDI +
Sbjct: 573 LKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQ 632
Query: 67 KT-------EVKSCKVNAANLPGPKDLGLVLRDQSHC---KAKKFPNSPVKAEKATISQA 116
+T E +S KV ++ + + L+D +A K + ++Q
Sbjct: 633 ETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQE 692
Query: 117 KSEKATSLQAKAEKSPKSPNSVKAE-------KASSYQMKSEKVPSSPAEAEKGPSLLLK 169
K EK L + K + ++ + K+++ ++KSEK+ S ++ L +
Sbjct: 693 KQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQIS-TNLQRRQQLEEQ 751
Query: 170 DMRQKTELQQIGKKIPSSFTSVD--KVNIEAVGGEKCALQNSPRSQKQ----------QT 217
+ TE+Q + ++I + V + +E EK L N + + +
Sbjct: 752 TVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKLNDIKEK 811
Query: 218 CTDNTGDSDDSASGIEDVSDDLSKMKNDESNKENSSEMDYLENATVIDESALTPEQRLGL 277
+ G D + I+D DD K K E NK + + ++ I+E Q +
Sbjct: 812 VKNIHGYMKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRLMRQDIDT 871
Query: 278 KQAEERLERDHIFRLEKRSPEYTNCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQE 337
++ +ER +D++ L KR+ E L +E + +H+KE + + K E
Sbjct: 872 QKIQERWLQDNL-TLRKRNEE-----------LKEVE--EERKQHLKEMGQMQVLQMKSE 917
Query: 338 ESEL-RSLPPPSPAHLAAL------SVAVIELAKEHGITDDDLRVRQEIVEEMSKVI-TT 389
+L ++ H AL +I KE + + R +E EM V+ TT
Sbjct: 918 HQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKE--LREPQFRDAEEKYREMMIVMRTT 975
Query: 390 FLPECSLRLYGSSLTRFALKSSDVNID 416
L L +Y +L + +K + ++
Sbjct: 976 ELVNKDLDIYYKTLDQAIMKFHSMKME 1002
>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
Length = 1312
Score = 49.7 bits (117), Expect = 2e-05
Identities = 95/447 (21%), Positives = 177/447 (39%), Gaps = 54/447 (12%)
Query: 7 LKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQNDICIE 66
LKS E KK + V Q++ +K + E+ N N N + +NDI +
Sbjct: 712 LKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQ 771
Query: 67 KT-------EVKSCKVNAANLPGPKDLGLVLRDQSHC---KAKKFPNSPVKAEKATISQA 116
+T E +S KV ++ + + L+D +A K + ++Q
Sbjct: 772 ETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQE 831
Query: 117 KSEKATSLQAKAEKSPKSPNSVKAE-------KASSYQMKSEKVPSSPAEAEKGPSLLLK 169
K EK L + K + ++ + K+++ ++KSEK+ S ++ L +
Sbjct: 832 KQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQIS-TNLQRRQQLEEQ 890
Query: 170 DMRQKTELQQIGKKIPSSFTSVD--KVNIEAVGGEKCALQNSPRSQKQ----------QT 217
+ TE+Q + ++I + V + +E EK L N + + +
Sbjct: 891 TVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQDKLNDIKEK 950
Query: 218 CTDNTGDSDDSASGIEDVSDDLSKMKNDESNKENSSEMDYLENATVIDESALTPEQRLGL 277
+ G D + I+D DD K K E NK + + ++ I+E Q +
Sbjct: 951 VKNIHGYMKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRLMRQDIDT 1010
Query: 278 KQAEERLERDHIFRLEKRSPEYTNCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQE 337
++ +ER +D++ L KR+ E L +E + +H+KE + + K E
Sbjct: 1011 QKIQERWLQDNL-TLRKRNEE-----------LKEVE--EERKQHLKEMGQMQVLQMKSE 1056
Query: 338 ESEL-RSLPPPSPAHLAAL------SVAVIELAKEHGITDDDLRVRQEIVEEMSKVI-TT 389
+L ++ H AL +I KE + + R +E EM V+ TT
Sbjct: 1057 HQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKE--LREPQFRDAEEKYREMMIVMRTT 1114
Query: 390 FLPECSLRLYGSSLTRFALKSSDVNID 416
L L +Y +L + +K + ++
Sbjct: 1115 ELVNKDLDIYYKTLDQAIMKFHSMKME 1141
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 49.7 bits (117), Expect = 2e-05
Identities = 61/179 (34%), Positives = 67/179 (37%), Gaps = 31/179 (17%)
Query: 1424 SPSYSPQPQPFPQNSSQSAAITQPSSQ--PGSQPKLGPPQQGAQPPHQVQMPLYNFP--- 1478
+P PQPQP PQ A QP Q P P L PPQ P Q P P
Sbjct: 948 APRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYPYAPQPGVL 1007
Query: 1479 -QSPP---AQYSPMHNMGLLPMH----PLQIPAPSWPIHGPVIHSAPGSAPSNIGLNDPS 1530
Q PP Q P LP H P P P P H P+ A G APS +
Sbjct: 1008 GQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPL---AYGPAPSTRPMG--- 1061
Query: 1531 IIFAQPAARPVAIPNTSHDGHWPRTVAPNSLVNSGAVGNSEPGFRGLTPPIPWEHAPRP 1589
P A P+ I S G T +P+ LV S A PG G PP P P P
Sbjct: 1062 -----PQAAPLTIRGPSSAGQ--STPSPH-LVPSPA---PSPG-PGPVPPRPPAAEPPP 1108
>gi|5902142 DNA polymerase sigma [Homo sapiens]
Length = 542
Score = 49.3 bits (116), Expect = 3e-05
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 965 PCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEK 1024
PC E+ + ++ + + K+ A + +FGS G SD+D+ + + +
Sbjct: 3 PCPEEAAMRREVVKRIETVVKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQ 62
Query: 1025 LNCKEIIENLAKILKRHPGLR--NILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNT 1082
L L + L++H +I + A VPI+K + + ++ DIS
Sbjct: 63 L--------LEQALRKHNVAEPCSIKVLDKATVPIIKLTDQETEVKVDISFNMETGVRAA 114
Query: 1083 RMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQ 1133
+ Y + YL +K F + D+ + G +SSY+ ILM + FLQ
Sbjct: 115 EFIKNYMKKYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQ 165
Score = 45.8 bits (107), Expect = 3e-04
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Query: 371 DDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFPPKMNHPDLLI 430
++ +R+E+V+ + V+ P ++++GS T L +SD ID+ K P L +
Sbjct: 6 EEAAMRREVVKRIETVVKDLWPTADVQIFGSFSTGLYLPTSD--IDLVVFGKWERPPLQL 63
Query: 431 KVLGILKKNVLY-VDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKI 489
+ K NV ++ A VP++ D+++ + +S + + + K
Sbjct: 64 LEQALRKHNVAEPCSIKVLDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKK 123
Query: 490 EPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ 531
+ L+L + + ++ GGI SY LM + FLQ
Sbjct: 124 YSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQ 165
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 49.3 bits (116), Expect = 3e-05
Identities = 54/163 (33%), Positives = 62/163 (38%), Gaps = 32/163 (19%)
Query: 1450 QPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHP-----LQIPAP 1504
Q G +P + PP PPHQ Q PQ PP Q P H P HP Q P P
Sbjct: 53 QSGPKPPIPPP-----PPHQQQQQPP--PQQPPPQQPPPHQP---PPHPQPHQQQQPPPP 102
Query: 1505 SWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVA-IPNTSHDGHWPRTVAPNSLVN 1563
PV+ PG AP +G P+ A PA P + P S G P T P
Sbjct: 103 PQDSSKPVVAQGPGPAP-GVGSAPPASSSAPPATPPTSGAPPGSGPGPTP-TPPP----- 155
Query: 1564 SGAVGNSEPGFRGLTPPI-------PWEHAPRPHFPLVPASWP 1599
AV ++ PG TPP P P P VP P
Sbjct: 156 --AVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGP 196
Score = 40.4 bits (93), Expect = 0.014
Identities = 48/176 (27%), Positives = 60/176 (34%), Gaps = 29/176 (16%)
Query: 1423 ESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLGP-PQQGAQPPHQVQMPLYNFPQSP 1481
+ P + P P P P Q Q SS+P GP P G+ PP P P +P
Sbjct: 81 QPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP----PATP 136
Query: 1482 PAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAP------SNIGLNDPSIIFAQ 1535
P +P P P P+ P P + SAP AP S + P
Sbjct: 137 PTSGAP----------PGSGPGPT-PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQA--GG 183
Query: 1536 PAARPVAIPNTSHDGHWPRT-VAPNSLVNSGAVGNSEPGFRGLTPPIPWEHAPRPH 1590
P P A+P G P+ P G +PG G P H PH
Sbjct: 184 PPPPPAAVPG---PGPGPKQGPGPGGPKGGKMPGGPKPG-GGPGLSTPGGHPKPPH 235
Score = 39.7 bits (91), Expect = 0.024
Identities = 58/224 (25%), Positives = 73/224 (32%), Gaps = 34/224 (15%)
Query: 1425 PSYSPQPQPFPQNSSQSAAITQPSSQPG---------SQPKLGPPQQGAQP---PHQVQM 1472
P QP P PQ+SS+ P PG S P PP GA P P
Sbjct: 93 PHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPT 152
Query: 1473 PLYNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAP-SNIGLNDPSI 1531
P +PP P +P P Q P P P PG P G P
Sbjct: 153 PPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPP---PAAVPGPGPGPKQGPGPGGPKG 209
Query: 1532 IFAQPAARPVAIPNTSHDGHWPRTVAPNSLVNSGAVGNSEP-GFRGLTPPIPWEHAPRPH 1590
+P P S G P+ P+ G EP G R PP +H P
Sbjct: 210 GKMPGGPKPGGGPGLSTPGGHPK--PPHR-------GGGEPRGGRQHHPPYHQQHHQGP- 259
Query: 1591 FPLVPASWPYGLHQNFMHQGNARFQPNKPFYTQ--DRCATRRCR 1632
P P G + + F+ N + ++ T+RCR
Sbjct: 260 ----PPGGPGGRSEEKISDSEG-FKANLSLLRRPGEKTYTQRCR 298
Score = 39.3 bits (90), Expect = 0.032
Identities = 36/122 (29%), Positives = 45/122 (36%), Gaps = 13/122 (10%)
Query: 1425 PSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQ 1484
P + Q QP PQ Q P QP P+ QQ PP P+ Q P
Sbjct: 64 PPHQQQQQPPPQ---QPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPV--VAQGP--- 115
Query: 1485 YSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIP 1544
P +G P P AP P P + PGS P P++ A P A P P
Sbjct: 116 -GPAPGVGSAP--PASSSAP--PATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPP 170
Query: 1545 NT 1546
++
Sbjct: 171 SS 172
>gi|34101286 zinc finger RNA binding protein [Homo sapiens]
Length = 1074
Score = 49.3 bits (116), Expect = 3e-05
Identities = 82/347 (23%), Positives = 137/347 (39%), Gaps = 62/347 (17%)
Query: 3 ESKTLKSENH-EPKKNVICEESKAVQVIGNQTLKA--------RNDKSVKEIENSSPNRN 53
++K LK + +P + C+ K + G QT K + + ++K +N+S + N
Sbjct: 315 QNKQLKPKQPPKPPQIHYCDVCK-ISCAGPQTYKEHLEGQKHKKKEAALKASQNTSSS-N 372
Query: 54 SSKKNKQNDICIEKTEVKSCKVNA--ANLPGPKDLGLVLRDQSHCK-AKKFPNSPVKAEK 110
SS + QN + E +V +A A++ G K +V + H K K P++ E
Sbjct: 373 SSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVV---KLHTKLGKPIPST----EP 425
Query: 111 ATISQAKSEKATSLQAKAEKSPKSPNSVKAEKASSYQMKSEKVPSSPAEAEKGPSLLLKD 170
+SQA S A S A K SP+S+ A + S S G S L +
Sbjct: 426 NVVSQATSSTAVS----ASKPTASPSSIAANNCT-VNTSSVATSSMKGLTTTGNSSL--N 478
Query: 171 MRQKTELQQIGKKIPSSFTSVDKVNIEAVGGEKCALQNSPRSQKQQTCTDNTGDSDDSAS 230
T++ + + + TS K+N VGG K +TG+ +
Sbjct: 479 STSNTKVSAVPTNMAAKKTSTPKINF--VGGNKL---------------QSTGNKAEDIK 521
Query: 231 GIEDVSDD--LSKMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQAEERLERDH 288
G E V S ++ E ++ SE +TP L+ + + D+
Sbjct: 522 GTECVKSTPVTSAVQIPEVKQDTVSE-------------PVTPASLAALQSDVQPVGHDY 568
Query: 289 IFRLEKRSPEYTNCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEK 335
+ E R+ E R+ CKLC + H+K +RH+ +K
Sbjct: 569 VE--EVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKK 613
>gi|94536832 PAP associated domain containing 5 isoform b [Homo
sapiens]
Length = 442
Score = 47.8 bits (112), Expect = 9e-05
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 962 LSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHEN 1021
+SP E+ R +++ +E I KE A + +FGS K G SD+D+ + EN
Sbjct: 1 MSPRPEEEKMRMEVVNRIESVI-KELWPSADVQIFGSFKTGLYLPTSDIDL-VVFGKWEN 58
Query: 1022 AEKLNCKEIIENLAKILKRHPGLR--NILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQ 1079
+ L + L++H ++ + A VPI+K + ++ DIS
Sbjct: 59 LP-------LWTLEEALRKHKVADEDSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGV 111
Query: 1080 HNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQ 1133
++ + P + YL +K F + D+ + G + SY+ LM + FLQ
Sbjct: 112 RAADLIKDFTKKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQ 165
Score = 45.1 bits (105), Expect = 6e-04
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Query: 371 DDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFPPKMNHPDLLI 430
++ ++R E+V + VI P ++++GS T L +SD+++ + F N P +
Sbjct: 6 EEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL-VVFGKWENLPLWTL 64
Query: 431 KVLGILKKNVLYVD-VESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKI 489
+ + K V D V+ A VP++ D + + +S DL+ K
Sbjct: 65 EE-ALRKHKVADEDSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKK 123
Query: 490 EPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ 531
PV LVL + + ++ GGI SY LM + FLQ
Sbjct: 124 YPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQ 165
>gi|94536834 PAP associated domain containing 5 isoform a [Homo
sapiens]
Length = 489
Score = 47.8 bits (112), Expect = 9e-05
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 962 LSPPCSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHEN 1021
+SP E+ R +++ +E I KE A + +FGS K G SD+D+ + EN
Sbjct: 1 MSPRPEEEKMRMEVVNRIESVI-KELWPSADVQIFGSFKTGLYLPTSDIDL-VVFGKWEN 58
Query: 1022 AEKLNCKEIIENLAKILKRHPGLR--NILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQ 1079
+ L + L++H ++ + A VPI+K + ++ DIS
Sbjct: 59 LP-------LWTLEEALRKHKVADEDSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGV 111
Query: 1080 HNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQ 1133
++ + P + YL +K F + D+ + G + SY+ LM + FLQ
Sbjct: 112 RAADLIKDFTKKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQ 165
Score = 45.1 bits (105), Expect = 6e-04
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Query: 371 DDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFPPKMNHPDLLI 430
++ ++R E+V + VI P ++++GS T L +SD+++ + F N P +
Sbjct: 6 EEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL-VVFGKWENLPLWTL 64
Query: 431 KVLGILKKNVLYVD-VESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKI 489
+ + K V D V+ A VP++ D + + +S DL+ K
Sbjct: 65 EE-ALRKHKVADEDSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKK 123
Query: 490 EPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ 531
PV LVL + + ++ GGI SY LM + FLQ
Sbjct: 124 YPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQ 165
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 47.0 bits (110), Expect = 2e-04
Identities = 49/193 (25%), Positives = 68/193 (35%), Gaps = 4/193 (2%)
Query: 1404 SAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQG 1463
S Q + SI++ QS PS Q P P QP P P PQQ
Sbjct: 1623 SVQPAANCSIKSPQSCVVERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQ 1682
Query: 1464 AQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAPSN 1523
QP Q P Q PP M+N ++IP + + PG +
Sbjct: 1683 PQPQPQQPPPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAG 1742
Query: 1524 IGLNDPSIIFAQPAARPVAIPNTSHDGH-WPRTVAPNSLVNSGAVGNSEPGFRGLTPPIP 1582
+ PS F+ A+ + NT D H P + +P + +V S G L P P
Sbjct: 1743 -SYSQPSATFS--LAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHP 1799
Query: 1583 WEHAPRPHFPLVP 1595
P+ + P
Sbjct: 1800 LAGTPQAQATMTP 1812
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 47.0 bits (110), Expect = 2e-04
Identities = 49/193 (25%), Positives = 68/193 (35%), Gaps = 4/193 (2%)
Query: 1404 SAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQG 1463
S Q + SI++ QS PS Q P P QP P P PQQ
Sbjct: 1623 SVQPAANCSIKSPQSCVVERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQ 1682
Query: 1464 AQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAPSN 1523
QP Q P Q PP M+N ++IP + + PG +
Sbjct: 1683 PQPQPQQPPPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAG 1742
Query: 1524 IGLNDPSIIFAQPAARPVAIPNTSHDGH-WPRTVAPNSLVNSGAVGNSEPGFRGLTPPIP 1582
+ PS F+ A+ + NT D H P + +P + +V S G L P P
Sbjct: 1743 -SYSQPSATFS--LAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHP 1799
Query: 1583 WEHAPRPHFPLVP 1595
P+ + P
Sbjct: 1800 LAGTPQAQATMTP 1812
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 47.0 bits (110), Expect = 2e-04
Identities = 49/193 (25%), Positives = 68/193 (35%), Gaps = 4/193 (2%)
Query: 1404 SAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQG 1463
S Q + SI++ QS PS Q P P QP P P PQQ
Sbjct: 1623 SVQPAANCSIKSPQSCVVERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQ 1682
Query: 1464 AQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAPSN 1523
QP Q P Q PP M+N ++IP + + PG +
Sbjct: 1683 PQPQPQQPPPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAG 1742
Query: 1524 IGLNDPSIIFAQPAARPVAIPNTSHDGH-WPRTVAPNSLVNSGAVGNSEPGFRGLTPPIP 1582
+ PS F+ A+ + NT D H P + +P + +V S G L P P
Sbjct: 1743 -SYSQPSATFS--LAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHP 1799
Query: 1583 WEHAPRPHFPLVP 1595
P+ + P
Sbjct: 1800 LAGTPQAQATMTP 1812
>gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens]
Length = 171
Score = 46.2 bits (108), Expect = 3e-04
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 1295 CRVCGKIGHYMKDCPKRKSSLLFRLKK-----KDSEEEKEGNEEEKDSRDVLDPRDLHDT 1349
C CG+ GH KDC ++ + + KD +E K E E+ + P H
Sbjct: 47 CYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKR--EREQCCYNCGKPG--HLA 102
Query: 1350 RDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
RD + +C+ CG+ GH++++C +VK R
Sbjct: 103 RDCDHADEQKCYSCGEFGHIQKDCTKVKCYR 133
>gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens]
Length = 178
Score = 46.2 bits (108), Expect = 3e-04
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 1295 CRVCGKIGHYMKDCPKRKSSLLFRLKK-----KDSEEEKEGNEEEKDSRDVLDPRDLHDT 1349
C CG+ GH KDC ++ + + KD +E K E E+ + P H
Sbjct: 54 CYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKR--EREQCCYNCGKPG--HLA 109
Query: 1350 RDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
RD + +C+ CG+ GH++++C +VK R
Sbjct: 110 RDCDHADEQKCYSCGEFGHIQKDCTKVKCYR 140
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 46.2 bits (108), Expect = 3e-04
Identities = 52/202 (25%), Positives = 78/202 (38%), Gaps = 20/202 (9%)
Query: 1404 SAQQQGDQSIRTRQSSECSESPS-YSPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQ- 1461
S G R S SPS YSP +S S+ ++Q ++P P L PP
Sbjct: 112 SLNDDGSSDPRDIDQDNRSTSPSIYSPGS--VENDSDSSSGLSQGPARPYHPPPLFPPSP 169
Query: 1462 ----------QGAQPPHQVQMPL-YNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPI-H 1509
+ + PH P Y+ P PP G P HP P + +
Sbjct: 170 QPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLS 229
Query: 1510 GPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNSLVNSGAVGN 1569
GP + G A S++G + P P+++ ++ G P T P + V G + +
Sbjct: 230 GPPMGPKGGGAASSVGGPNGGKQHPPPTT-PISVSSSGASGA-PPTKPPTTPVGGGNLPS 287
Query: 1570 SEP--GFRGLTPPIPWEHAPRP 1589
+ P F +TP +P A RP
Sbjct: 288 APPPANFPHVTPNLPPPPALRP 309
Score = 34.7 bits (78), Expect = 0.78
Identities = 48/189 (25%), Positives = 59/189 (31%), Gaps = 8/189 (4%)
Query: 1399 QQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLG 1458
QQ QQQ Q + +Q S P P P SS A S GS
Sbjct: 484 QQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYP 543
Query: 1459 PPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLP-MHPLQIPAPSWPIHGPVIHSAP 1517
P PPH P PP S + +P P+PS G P
Sbjct: 544 PGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 603
Query: 1518 GSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWP---RTVAPNSLVNSGAVG---NSE 1571
+ S + A A+ P S G P R +P + + G S
Sbjct: 604 VPTVTTSSAT-LSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSP 662
Query: 1572 PGFRGLTPP 1580
P FR TPP
Sbjct: 663 PSFRTGTPP 671
Score = 33.5 bits (75), Expect = 1.7
Identities = 54/221 (24%), Positives = 75/221 (33%), Gaps = 42/221 (19%)
Query: 1431 PQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHN 1490
P P + S S A P ++P + P G A PP N P PP P++N
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLP--PPPALRPLNN 312
Query: 1491 -------MGLLPMHPLQIPAPSWPIHG-----PVIHSAPGSAPSNIGLNDPSIIFAQPAA 1538
+G P+ P +P+P G P P APS L S + A
Sbjct: 313 ASASPPGLGAQPL-PGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPAS---SSAPA 368
Query: 1539 RPVAIPNTSHDGHWPRTVAPNSLVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASW 1598
P+ P +S S +S A +S P P A P P S+
Sbjct: 369 PPMRFPYSS------------SSSSSAAASSSSSSSSSSASPFPASQA----LPSYPHSF 412
Query: 1599 PYGLHQNFMHQGNARFQPNKPFYTQDRCATRRCRERCPHPP 1639
P + +Q P YTQ ++ + P PP
Sbjct: 413 PPPTSLSVSNQ--------PPKYTQPSLPSQAVWSQGPPPP 445
Score = 32.0 bits (71), Expect = 5.1
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 122 TSLQAKAEKSPKSPNSVKAEKAS----SYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTEL 177
+S KAEKS ++ + E+AS + Q +SE++ S +E P + KTE
Sbjct: 41 SSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSEEISESESEETNAPK------KTKTEQ 94
Query: 178 QQIGKKIPSSFTSVDKVNIEAVG-GEKCALQNSPRSQKQQTCTDNTGDSD-DSASGI 232
+ + PS S+D ++ G + + RS + + ++D DS+SG+
Sbjct: 95 ELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGL 151
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 46.2 bits (108), Expect = 3e-04
Identities = 52/202 (25%), Positives = 78/202 (38%), Gaps = 20/202 (9%)
Query: 1404 SAQQQGDQSIRTRQSSECSESPS-YSPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQ- 1461
S G R S SPS YSP +S S+ ++Q ++P P L PP
Sbjct: 112 SLNDDGSSDPRDIDQDNRSTSPSIYSPGS--VENDSDSSSGLSQGPARPYHPPPLFPPSP 169
Query: 1462 ----------QGAQPPHQVQMPL-YNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPI-H 1509
+ + PH P Y+ P PP G P HP P + +
Sbjct: 170 QPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLS 229
Query: 1510 GPVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNSLVNSGAVGN 1569
GP + G A S++G + P P+++ ++ G P T P + V G + +
Sbjct: 230 GPPMGPKGGGAASSVGGPNGGKQHPPPTT-PISVSSSGASGA-PPTKPPTTPVGGGNLPS 287
Query: 1570 SEP--GFRGLTPPIPWEHAPRP 1589
+ P F +TP +P A RP
Sbjct: 288 APPPANFPHVTPNLPPPPALRP 309
Score = 34.7 bits (78), Expect = 0.78
Identities = 48/189 (25%), Positives = 59/189 (31%), Gaps = 8/189 (4%)
Query: 1399 QQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLG 1458
QQ QQQ Q + +Q S P P P SS A S GS
Sbjct: 484 QQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYP 543
Query: 1459 PPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLP-MHPLQIPAPSWPIHGPVIHSAP 1517
P PPH P PP S + +P P+PS G P
Sbjct: 544 PGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 603
Query: 1518 GSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWP---RTVAPNSLVNSGAVG---NSE 1571
+ S + A A+ P S G P R +P + + G S
Sbjct: 604 VPTVTTSSAT-LSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSP 662
Query: 1572 PGFRGLTPP 1580
P FR TPP
Sbjct: 663 PSFRTGTPP 671
Score = 33.5 bits (75), Expect = 1.7
Identities = 54/221 (24%), Positives = 75/221 (33%), Gaps = 42/221 (19%)
Query: 1431 PQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHN 1490
P P + S S A P ++P + P G A PP N P PP P++N
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLP--PPPALRPLNN 312
Query: 1491 -------MGLLPMHPLQIPAPSWPIHG-----PVIHSAPGSAPSNIGLNDPSIIFAQPAA 1538
+G P+ P +P+P G P P APS L S + A
Sbjct: 313 ASASPPGLGAQPL-PGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPAS---SSAPA 368
Query: 1539 RPVAIPNTSHDGHWPRTVAPNSLVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASW 1598
P+ P +S S +S A +S P P A P P S+
Sbjct: 369 PPMRFPYSS------------SSSSSAAASSSSSSSSSSASPFPASQA----LPSYPHSF 412
Query: 1599 PYGLHQNFMHQGNARFQPNKPFYTQDRCATRRCRERCPHPP 1639
P + +Q P YTQ ++ + P PP
Sbjct: 413 PPPTSLSVSNQ--------PPKYTQPSLPSQAVWSQGPPPP 445
Score = 32.0 bits (71), Expect = 5.1
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 122 TSLQAKAEKSPKSPNSVKAEKAS----SYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTEL 177
+S KAEKS ++ + E+AS + Q +SE++ S +E P + KTE
Sbjct: 41 SSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSEEISESESEETNAPK------KTKTEQ 94
Query: 178 QQIGKKIPSSFTSVDKVNIEAVG-GEKCALQNSPRSQKQQTCTDNTGDSD-DSASGI 232
+ + PS S+D ++ G + + RS + + ++D DS+SG+
Sbjct: 95 ELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGL 151
>gi|83977459 pleckstrin homology-like domain, family A, member 1 [Homo
sapiens]
Length = 401
Score = 45.4 bits (106), Expect = 4e-04
Identities = 34/107 (31%), Positives = 40/107 (37%), Gaps = 11/107 (10%)
Query: 1411 QSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQPPHQV 1470
+S R +Q + P PQPQP Q QP QP QP+ P Q P
Sbjct: 293 KSTRQKQQHLVQQQPPSQPQPQP------QLQPQPQPQPQPQPQPQSQPQPQPQPKPQPQ 346
Query: 1471 QMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAP 1517
Q+ Y P P + H HP QIP P P HS P
Sbjct: 347 QLHPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPH-----PQPHSQP 388
Score = 33.9 bits (76), Expect = 1.3
Identities = 34/133 (25%), Positives = 49/133 (36%), Gaps = 8/133 (6%)
Query: 1351 DFRDPRDLRCFICGDAGHVRRECPEVKLARQRNSSVAAAQLVRNLVNAQQVAGSAQQQGD 1410
DFR P+D G + + + K RQ +V + + + + QQ Q Q
Sbjct: 263 DFRCPQDQ-----GWNAEITLQMVQYK-NRQAILAVKSTRQKQQHLVQQQPPSQPQPQPQ 316
Query: 1411 QSIRTRQSSECSESPSYSPQPQPFPQNSSQSA-AITQPSSQPGSQPKLGPPQQGAQPPHQ 1469
+ + + P PQPQP P+ Q P P S P P PHQ
Sbjct: 317 LQPQPQPQPQPQPQPQSQPQPQPQPKPQPQQLHPYPHPHPHPHSHPHSHPHPHPHPHPHQ 376
Query: 1470 VQMPLYNFPQSPP 1482
+ P + P S P
Sbjct: 377 IPHP-HPQPHSQP 388
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 45.4 bits (106), Expect = 4e-04
Identities = 75/372 (20%), Positives = 134/372 (36%), Gaps = 39/372 (10%)
Query: 1143 LQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTE--SLGELWLGLLRFYTEEF 1200
++E+ D +PQ+++ W K + K P N SL EL + R + E
Sbjct: 2175 IKEMADKSGLPQKVIKHWFRNTLFKERQRNKDSPYNFSNPPITSLEELKIDS-RPPSPEP 2233
Query: 1201 DFKEYVISIRQKKL------LTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKA 1254
+EY S R + L + + + +D F+ NL +R + + A
Sbjct: 2234 PKQEYWGSKRSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNA 2293
Query: 1255 FINGRKLFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRKSS 1314
RK + G E D + T + C+ C + + D K +
Sbjct: 2294 RQKARKNYENQGEGKDGERRELTNDRYIRTSNL----NYQCKKCSLVFQRIFDLIKHQKK 2349
Query: 1315 LLFRLKKKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECP 1374
L + KD +EE + + + +DS D ++ P C + P
Sbjct: 2350 LCY----KDEDEEGQDDSQNEDSMDAME---------ILTPTSSSCSTPMPSQAYSAPAP 2396
Query: 1375 EVKLARQRNSSVAAAQLVRNLVNAQQVA--GSAQQQGDQSIRTRQSSECSESPSYSPQPQ 1432
++ A++ ++ A+++A S + GD+ + ++ + + Q Q
Sbjct: 2397 SA-------NNTASSAFLQLTAEAEELATFNSKTEAGDEKPKLAEAPSAQPNQTQEKQGQ 2449
Query: 1433 PFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMG 1492
P P+ Q + ++ P+L QPP Q P PQS P+ H
Sbjct: 2450 PKPELQQQEQPEQKTNTPQQKLPQLVSLPSLPQPPPQAPPPQCPLPQSSPSPSQLSH--- 2506
Query: 1493 LLPMHPLQIPAP 1504
LP+ PL P
Sbjct: 2507 -LPLKPLHTSTP 2517
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 45.1 bits (105), Expect = 6e-04
Identities = 68/269 (25%), Positives = 100/269 (37%), Gaps = 43/269 (15%)
Query: 1329 EGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLARQRNSSVAA 1388
EG E DSR V D DP+D+ D + R P + + Q N S +
Sbjct: 128 EGEGESSDSRSVNDEGS-------SDPKDI------DQDN-RSTSPSIP-SPQDNESDSD 172
Query: 1389 AQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQ-PQPFPQNSSQSAAITQP 1447
+ + ++ AQ A A T + S +P +PQ P P P + SA P
Sbjct: 173 SSAQQQMLQAQPPALQAP--------TGVTPAPSSAPPGTPQLPTPGP---TPSATAVPP 221
Query: 1448 SSQPGSQPKLGPPQQGAQP-PH-QVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPA-- 1503
P + PQ P PH +Q PQ PP+ + P H P+ PL A
Sbjct: 222 QGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQ 281
Query: 1504 PSWPIHG-PVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNSL- 1561
PS P H P +H P ++ P + P +P +P + G P +P +
Sbjct: 282 PSAPSHAQPPLHGQGPPGPHSLQAG-PLLQHPGP-PQPFGLPPQASQGQAPLGTSPAAAY 339
Query: 1562 --------VNSGAVGNSEPGFRGLTPPIP 1582
+ A+ + +P PP P
Sbjct: 340 PHTSLQLPASQSALQSQQPPREQPLPPAP 368
Score = 36.6 bits (83), Expect = 0.21
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 1429 PQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQPP---HQVQMPLYNFPQSPPAQY 1485
PQ QP P + +Q +TQ + P P + PP HQV PQ P AQ+
Sbjct: 438 PQSQPLPSSPAQPPGLTQSQNLP--------PPPASHPPTGLHQVA------PQPPFAQH 483
Query: 1486 SPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAP 1517
P G P+ P P+ S P GP + P
Sbjct: 484 -PFVPGGPPPITPPTCPSTSTPPAGPGTSAQP 514
Score = 35.8 bits (81), Expect = 0.35
Identities = 60/233 (25%), Positives = 78/233 (33%), Gaps = 61/233 (26%)
Query: 1428 SPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQP--PHQVQM-PLYNFPQSP-PA 1483
SP P P P +T + QP + PP G P PH +Q PL P P P
Sbjct: 259 SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF 318
Query: 1484 QYSPMHNMGLLPM-------HP---LQIPA----------------PSWPIHGPVIHSAP 1517
P + G P+ +P LQ+PA P P+ P I P
Sbjct: 319 GLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPP 378
Query: 1518 GSA------------PSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNSL---V 1562
+ P ++ P + A P P +S H P + P L
Sbjct: 379 TTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMP 438
Query: 1563 NSGAVGNSEPGFRGLT-----PPIPWEH--------APRPHF---PLVPASWP 1599
S + +S GLT PP P H AP+P F P VP P
Sbjct: 439 QSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPP 491
Score = 32.3 bits (72), Expect = 3.9
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 122 TSLQAKAEKSPKSPNSVKAEKAS---SYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQ 178
+S +KAE KS VK E +S S + + EKV S EA++ S +KT+ Q
Sbjct: 66 SSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSS-------KKTKTQ 118
Query: 179 QIGKKIPSSFTSVDKVNIEAVGGEKCA------LQNSPRSQKQQTCTDNTGDSDDSA 229
+I + S + + +V E + N S + DN DSD SA
Sbjct: 119 EISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSA 175
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 45.1 bits (105), Expect = 6e-04
Identities = 68/269 (25%), Positives = 100/269 (37%), Gaps = 43/269 (15%)
Query: 1329 EGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLARQRNSSVAA 1388
EG E DSR V D DP+D+ D + R P + + Q N S +
Sbjct: 682 EGEGESSDSRSVNDEGS-------SDPKDI------DQDN-RSTSPSIP-SPQDNESDSD 726
Query: 1389 AQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQ-PQPFPQNSSQSAAITQP 1447
+ + ++ AQ A A T + S +P +PQ P P P + SA P
Sbjct: 727 SSAQQQMLQAQPPALQAP--------TGVTPAPSSAPPGTPQLPTPGP---TPSATAVPP 775
Query: 1448 SSQPGSQPKLGPPQQGAQP-PH-QVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPA-- 1503
P + PQ P PH +Q PQ PP+ + P H P+ PL A
Sbjct: 776 QGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQ 835
Query: 1504 PSWPIHG-PVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNSL- 1561
PS P H P +H P ++ P + P +P +P + G P +P +
Sbjct: 836 PSAPSHAQPPLHGQGPPGPHSLQAG-PLLQHPGP-PQPFGLPPQASQGQAPLGTSPAAAY 893
Query: 1562 --------VNSGAVGNSEPGFRGLTPPIP 1582
+ A+ + +P PP P
Sbjct: 894 PHTSLQLPASQSALQSQQPPREQPLPPAP 922
Score = 36.6 bits (83), Expect = 0.21
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 1429 PQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQPP---HQVQMPLYNFPQSPPAQY 1485
PQ QP P + +Q +TQ + P P + PP HQV PQ P AQ+
Sbjct: 992 PQSQPLPSSPAQPPGLTQSQNLP--------PPPASHPPTGLHQVA------PQPPFAQH 1037
Query: 1486 SPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAP 1517
P G P+ P P+ S P GP + P
Sbjct: 1038 -PFVPGGPPPITPPTCPSTSTPPAGPGTSAQP 1068
Score = 35.8 bits (81), Expect = 0.35
Identities = 60/233 (25%), Positives = 78/233 (33%), Gaps = 61/233 (26%)
Query: 1428 SPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQP--PHQVQM-PLYNFPQSP-PA 1483
SP P P P +T + QP + PP G P PH +Q PL P P P
Sbjct: 813 SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF 872
Query: 1484 QYSPMHNMGLLPM-------HP---LQIPA----------------PSWPIHGPVIHSAP 1517
P + G P+ +P LQ+PA P P+ P I P
Sbjct: 873 GLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPP 932
Query: 1518 GSA------------PSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNSL---V 1562
+ P ++ P + A P P +S H P + P L
Sbjct: 933 TTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMP 992
Query: 1563 NSGAVGNSEPGFRGLT-----PPIPWEH--------APRPHF---PLVPASWP 1599
S + +S GLT PP P H AP+P F P VP P
Sbjct: 993 QSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPP 1045
Score = 32.3 bits (72), Expect = 3.9
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 122 TSLQAKAEKSPKSPNSVKAEKAS---SYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQ 178
+S +KAE KS VK E +S S + + EKV S EA++ S +KT+ Q
Sbjct: 620 SSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSS-------KKTKTQ 672
Query: 179 QIGKKIPSSFTSVDKVNIEAVGGEKCA------LQNSPRSQKQQTCTDNTGDSDDSA 229
+I + S + + +V E + N S + DN DSD SA
Sbjct: 673 EISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSA 729
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 45.1 bits (105), Expect = 6e-04
Identities = 68/269 (25%), Positives = 100/269 (37%), Gaps = 43/269 (15%)
Query: 1329 EGNEEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLARQRNSSVAA 1388
EG E DSR V D DP+D+ D + R P + + Q N S +
Sbjct: 682 EGEGESSDSRSVNDEGS-------SDPKDI------DQDN-RSTSPSIP-SPQDNESDSD 726
Query: 1389 AQLVRNLVNAQQVAGSAQQQGDQSIRTRQSSECSESPSYSPQ-PQPFPQNSSQSAAITQP 1447
+ + ++ AQ A A T + S +P +PQ P P P + SA P
Sbjct: 727 SSAQQQMLQAQPPALQAP--------TGVTPAPSSAPPGTPQLPTPGP---TPSATAVPP 775
Query: 1448 SSQPGSQPKLGPPQQGAQP-PH-QVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPA-- 1503
P + PQ P PH +Q PQ PP+ + P H P+ PL A
Sbjct: 776 QGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQ 835
Query: 1504 PSWPIHG-PVIHSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNSL- 1561
PS P H P +H P ++ P + P +P +P + G P +P +
Sbjct: 836 PSAPSHAQPPLHGQGPPGPHSLQAG-PLLQHPGP-PQPFGLPPQASQGQAPLGTSPAAAY 893
Query: 1562 --------VNSGAVGNSEPGFRGLTPPIP 1582
+ A+ + +P PP P
Sbjct: 894 PHTSLQLPASQSALQSQQPPREQPLPPAP 922
Score = 36.6 bits (83), Expect = 0.21
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 1429 PQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQPP---HQVQMPLYNFPQSPPAQY 1485
PQ QP P + +Q +TQ + P P + PP HQV PQ P AQ+
Sbjct: 992 PQSQPLPSSPAQPPGLTQSQNLP--------PPPASHPPTGLHQVA------PQPPFAQH 1037
Query: 1486 SPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAP 1517
P G P+ P P+ S P GP + P
Sbjct: 1038 -PFVPGGPPPITPPTCPSTSTPPAGPGTSAQP 1068
Score = 35.8 bits (81), Expect = 0.35
Identities = 60/233 (25%), Positives = 78/233 (33%), Gaps = 61/233 (26%)
Query: 1428 SPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQP--PHQVQM-PLYNFPQSP-PA 1483
SP P P P +T + QP + PP G P PH +Q PL P P P
Sbjct: 813 SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF 872
Query: 1484 QYSPMHNMGLLPM-------HP---LQIPA----------------PSWPIHGPVIHSAP 1517
P + G P+ +P LQ+PA P P+ P I P
Sbjct: 873 GLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPP 932
Query: 1518 GSA------------PSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNSL---V 1562
+ P ++ P + A P P +S H P + P L
Sbjct: 933 TTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMP 992
Query: 1563 NSGAVGNSEPGFRGLT-----PPIPWEH--------APRPHF---PLVPASWP 1599
S + +S GLT PP P H AP+P F P VP P
Sbjct: 993 QSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPP 1045
Score = 32.3 bits (72), Expect = 3.9
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 122 TSLQAKAEKSPKSPNSVKAEKAS---SYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQ 178
+S +KAE KS VK E +S S + + EKV S EA++ S +KT+ Q
Sbjct: 620 SSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSS-------KKTKTQ 672
Query: 179 QIGKKIPSSFTSVDKVNIEAVGGEKCA------LQNSPRSQKQQTCTDNTGDSDDSA 229
+I + S + + +V E + N S + DN DSD SA
Sbjct: 673 EISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSA 729
>gi|239787762 SH2 domain protein 2A isoform 4 [Homo sapiens]
Length = 361
Score = 44.7 bits (104), Expect = 8e-04
Identities = 57/223 (25%), Positives = 84/223 (37%), Gaps = 45/223 (20%)
Query: 1399 QQVAGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLG 1458
+ +A + S+RT +S+ S+S +PQ P + P + G+ K
Sbjct: 156 EPLARQTPEPAGLSLRTEESNFGSKSQDPNPQYSPIIKQGQAPV----PMQKEGAGEK-- 209
Query: 1459 PPQQGAQPPHQVQMPLYNFPQSPPAQYS---PMHNMGLLPMHPLQIPAPSWPIHG----P 1511
P Q +P + P+ PQ PP Y+ P H P P PS PI+ P
Sbjct: 210 EPSQLLRP----KPPIPAKPQLPPEVYTIPVPRH-------RPAPRPKPSNPIYNEPDEP 258
Query: 1512 VI-----HSAPGSAPSNIGLNDPSIIFAQPAARPVAIPNTSHDGHWPRTVAPNSLVNSGA 1566
+ +PG APSNI + + P + + W R V P G+
Sbjct: 259 IAFYAMGRGSPGEAPSNI------YVEVEDEGLPATLGHPVLRKSWSRPV-PGGQNTGGS 311
Query: 1567 VGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQ 1609
+SE G PP+P H P P +W + L N Q
Sbjct: 312 QLHSENSVIGQGPPLP--HQP-------PPAWRHTLPHNLSRQ 345
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,000,030
Number of Sequences: 37866
Number of extensions: 3508910
Number of successful extensions: 21600
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 622
Number of HSP's that attempted gapping in prelim test: 17759
Number of HSP's gapped (non-prelim): 3526
length of query: 1645
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1529
effective length of database: 13,855,062
effective search space: 21184389798
effective search space used: 21184389798
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.