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Search of human proteins with 56790935
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56790935 hypothetical protein LOC85369 [Homo sapiens]
(837 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56790935 hypothetical protein LOC85369 [Homo sapiens] 1691 0.0
gi|55742705 hypothetical protein LOC57464 isoform a [Homo sapiens] 1149 0.0
gi|197245444 hypothetical protein LOC57464 isoform b [Homo sapiens] 1015 0.0
gi|9945318 MAX binding protein [Homo sapiens] 47 6e-05
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 47 7e-05
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 47 7e-05
gi|153792074 proline rich 12 [Homo sapiens] 43 0.001
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 42 0.002
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 42 0.002
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 42 0.002
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 42 0.002
gi|238859557 regulatory factor X1 [Homo sapiens] 42 0.003
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 41 0.005
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 41 0.005
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 40 0.007
gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase... 40 0.009
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 40 0.009
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 40 0.009
gi|39812378 RAN binding protein 9 [Homo sapiens] 40 0.012
gi|149944526 additional sex combs like 3 [Homo sapiens] 40 0.012
gi|56549694 enabled homolog isoform a [Homo sapiens] 39 0.015
gi|39930375 enabled homolog isoform b [Homo sapiens] 39 0.015
gi|56549696 E1A binding protein p400 [Homo sapiens] 39 0.015
gi|77681565 NG5 protein [Homo sapiens] 39 0.015
gi|122937424 one cut homeobox 3 [Homo sapiens] 39 0.015
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 39 0.020
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 39 0.020
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 39 0.020
gi|226498192 atonal homolog 8 [Homo sapiens] 39 0.026
gi|33356148 formin-like 1 [Homo sapiens] 39 0.026
>gi|56790935 hypothetical protein LOC85369 [Homo sapiens]
Length = 837
Score = 1691 bits (4379), Expect = 0.0
Identities = 837/837 (100%), Positives = 837/837 (100%)
Query: 1 MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGKAREFNRNQRKDSE 60
MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGKAREFNRNQRKDSE
Sbjct: 1 MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGKAREFNRNQRKDSE 60
Query: 61 GYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELDTN 120
GYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELDTN
Sbjct: 61 GYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELDTN 120
Query: 121 QHRTHAMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVG 180
QHRTHAMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVG
Sbjct: 121 QHRTHAMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVG 180
Query: 181 TFNALVELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDKAE 240
TFNALVELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDKAE
Sbjct: 181 TFNALVELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDKAE 240
Query: 241 WRTMRQTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGG 300
WRTMRQTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGG
Sbjct: 241 WRTMRQTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGG 300
Query: 301 FEELQSMKAEKRSILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQQKRGRREHKALIK 360
FEELQSMKAEKRSILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQQKRGRREHKALIK
Sbjct: 301 FEELQSMKAEKRSILGLPPLPEDSIKVIRNMRAASPPASASDLIEQQQKRGRREHKALIK 360
Query: 361 QDNLDAFNERDPYKADDSREEEEENDDDNSLEGETFPLERDEVMPPPLQHPQTDRLTCPK 420
QDNLDAFNERDPYKADDSREEEEENDDDNSLEGETFPLERDEVMPPPLQHPQTDRLTCPK
Sbjct: 361 QDNLDAFNERDPYKADDSREEEEENDDDNSLEGETFPLERDEVMPPPLQHPQTDRLTCPK 420
Query: 421 GLPWAPKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAE 480
GLPWAPKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAE
Sbjct: 421 GLPWAPKVREKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAE 480
Query: 481 VQAQMEEEYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTD 540
VQAQMEEEYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTD
Sbjct: 481 VQAQMEEEYLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTD 540
Query: 541 SINILADVLPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHVYQFEYM 600
SINILADVLPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHVYQFEYM
Sbjct: 541 SINILADVLPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHVYQFEYM 600
Query: 601 AQHLVFANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTAESLEAGDSNQF 660
AQHLVFANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTAESLEAGDSNQF
Sbjct: 601 AQHLVFANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTAESLEAGDSNQF 660
Query: 661 CWRNLFSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQ 720
CWRNLFSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQ
Sbjct: 661 CWRNLFSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQ 720
Query: 721 TKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQAEECALRANIERFNA 780
TKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQAEECALRANIERFNA
Sbjct: 721 TKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQAEECALRANIERFNA 780
Query: 781 RRYDRAHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREVFSKPISWEELLQ 837
RRYDRAHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREVFSKPISWEELLQ
Sbjct: 781 RRYDRAHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREVFSKPISWEELLQ 837
>gi|55742705 hypothetical protein LOC57464 isoform a [Homo sapiens]
Length = 834
Score = 1149 bits (2973), Expect = 0.0
Identities = 581/829 (70%), Positives = 677/829 (81%), Gaps = 21/829 (2%)
Query: 29 AQPPPGAPRAAAGLLPGGKA-------REFNRNQRKDSEGYSESPDLEFEYADTDKWAAE 81
A P G P A GGK RE R+QR++SEG + P LEFEY D D AAE
Sbjct: 5 AAPGTGGPPANGNGNGGGKGKQAAPKGREAFRSQRRESEGSVDCPTLEFEYGDADGHAAE 64
Query: 82 LSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELDTNQHRTHAMRLLDGLEVTAREKR 141
LSELYSYTE EF NR+CFEEDF+ V K+W EL+ + + + M LLD LEV +RE+R
Sbjct: 65 LSELYSYTENLEFTNNRRCFEEDFKTQVQGKEWLELEEDAQKAYIMGLLDRLEVVSRERR 124
Query: 142 LKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVGTFNALVELLNMEIDNSAACSS 201
LKVARA+LY+AQGTFGEC SE +V W RYN FLL ++GTF+ +ELL+MEIDNS ACSS
Sbjct: 125 LKVARAVLYLAQGTFGECDSEVDVLHWSRYNCFLLYQMGTFSTFLELLHMEIDNSQACSS 184
Query: 202 AVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDKAEWRTMRQTFRAELGSPLYNNEP 261
A+RKPA+S+ADST+LRVLL++MYL+VE + E E D WRT R+TFR EL ++N EP
Sbjct: 185 ALRKPAVSIADSTELRVLLSVMYLMVENIRLERETDPCGWRTARETFRTELSFSMHNEEP 244
Query: 262 FAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGGFEELQSMKAEKRSILGLPPLP 321
FA++LF MVTKFCSG APHFP+KKVLLLLWK V+ TLGGFE LQ++K +KR+ LGLPPL
Sbjct: 245 FALLLFSMVTKFCSGLAPHFPIKKVLLLLWKVVMFTLGGFEHLQTLKVQKRAELGLPPLA 304
Query: 322 EDSIKVIRNMRAASPPASASDLIEQQ------QKRGRR--EHKALIKQDNLDAFNERDPY 373
EDSI+V+++MRAASPP+ DL E Q + RGRR + L KQD+LD +NERD +
Sbjct: 305 EDSIQVVKSMRAASPPSYTLDLGESQLAPPPSKLRGRRGSRRQLLTKQDSLDIYNERDLF 364
Query: 374 KADDSREEEEEN---DDDNSLEGETFPLERDEVMPPP-LQHP-QTDRLTCPKGLPWAPKV 428
K ++ EEEE D + +L+GE LE+D ++PPP Q P +R+ PKGLPWAPKV
Sbjct: 365 KTEEPATEEEEESAGDGERTLDGELDLLEQDPLVPPPPSQAPLSAERVAFPKGLPWAPKV 424
Query: 429 REKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAEVQAQMEEE 488
R+KDIE FLE SR+KFIG+TLG DT+T+VGLPRPIHES+KTLKQHKY SIA+VQ + EEE
Sbjct: 425 RQKDIEHFLEMSRNKFIGFTLGQDTDTLVGLPRPIHESVKTLKQHKYISIADVQIKNEEE 484
Query: 489 YLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTDSINILADV 548
+ P+S GEE V + P E LYQG+L SLPQYMIALLKILLAAAPTSKAKTDSINILADV
Sbjct: 485 LEKCPMSLGEEVVPETPCEILYQGMLYSLPQYMIALLKILLAAAPTSKAKTDSINILADV 544
Query: 549 LPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHVYQFEYMAQHLVFAN 608
LPEEMP TVLQSMKLG+DVNRHKE+IVK+IS +LLLLLKHFKLNH+YQFEY++QHLVFAN
Sbjct: 545 LPEEMPITVLQSMKLGIDVNRHKEIIVKSISTLLLLLLKHFKLNHIYQFEYVSQHLVFAN 604
Query: 609 CIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTAESLEAGDSNQFCWRNLFSC 668
CIPLILKFFNQNI+SYITAKNSISVLDYP C + +LPELT ESLEAGD++QFCWRNLFSC
Sbjct: 605 CIPLILKFFNQNILSYITAKNSISVLDYPCCTIQDLPELTTESLEAGDNSQFCWRNLFSC 664
Query: 669 INLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLGRQW 728
INLLR+LNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAM+QLYVLKLLK+QTKYLGRQW
Sbjct: 665 INLLRLLNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMLQLYVLKLLKLQTKYLGRQW 724
Query: 729 RKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQAEECALRANIERFNARRYDRAHS 788
RKSNMKTMSAIYQKVRHR+NDDWAYGND+DARPWDFQAEEC LRANIE FN+RRYDR
Sbjct: 725 RKSNMKTMSAIYQKVRHRMNDDWAYGNDIDARPWDFQAEECTLRANIEAFNSRRYDRPQD 784
Query: 789 NPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLEREVFSKPISWEELLQ 837
+ +F PVDNCLQSVLGQR+DLPEDF +Y+LWLEREVFS+PI WEELLQ
Sbjct: 785 S-EFSPVDNCLQSVLGQRLDLPEDFHYSYELWLEREVFSQPICWEELLQ 832
>gi|197245444 hypothetical protein LOC57464 isoform b [Homo sapiens]
Length = 758
Score = 1015 bits (2624), Expect = 0.0
Identities = 517/747 (69%), Positives = 605/747 (80%), Gaps = 20/747 (2%)
Query: 29 AQPPPGAPRAAAGLLPGGKA-------REFNRNQRKDSEGYSESPDLEFEYADTDKWAAE 81
A P G P A GGK RE R+QR++SEG + P LEFEY D D AAE
Sbjct: 5 AAPGTGGPPANGNGNGGGKGKQAAPKGREAFRSQRRESEGSVDCPTLEFEYGDADGHAAE 64
Query: 82 LSELYSYTEGPEFLMNRKCFEEDFRIHVTDKKWTELDTNQHRTHAMRLLDGLEVTAREKR 141
LSELYSYTE EF NR+CFEEDF+ V K+W EL+ + + + M LLD LEV +RE+R
Sbjct: 65 LSELYSYTENLEFTNNRRCFEEDFKTQVQGKEWLELEEDAQKAYIMGLLDRLEVVSRERR 124
Query: 142 LKVARAILYVAQGTFGECSSEAEVQSWMRYNIFLLLEVGTFNALVELLNMEIDNSAACSS 201
LKVARA+LY+AQGTFGEC SE +V W RYN FLL ++GTF+ +ELL+MEIDNS ACSS
Sbjct: 125 LKVARAVLYLAQGTFGECDSEVDVLHWSRYNCFLLYQMGTFSTFLELLHMEIDNSQACSS 184
Query: 202 AVRKPAISLADSTDLRVLLNIMYLIVETVHQECEGDKAEWRTMRQTFRAELGSPLYNNEP 261
A+RKPA+S+ADST+LRVLL++MYL+VE + E E D WRT R+TFR EL ++N EP
Sbjct: 185 ALRKPAVSIADSTELRVLLSVMYLMVENIRLERETDPCGWRTARETFRTELSFSMHNEEP 244
Query: 262 FAIMLFGMVTKFCSGHAPHFPMKKVLLLLWKTVLCTLGGFEELQSMKAEKRSILGLPPLP 321
FA++LF MVTKFCSG APHFP+KKVLLLLWK V+ TLGGFE LQ++K +KR+ LGLPPL
Sbjct: 245 FALLLFSMVTKFCSGLAPHFPIKKVLLLLWKVVMFTLGGFEHLQTLKVQKRAELGLPPLA 304
Query: 322 EDSIKVIRNMRAASPPASASDLIEQQ------QKRGRR--EHKALIKQDNLDAFNERDPY 373
EDSI+V+++MRAASPP+ DL E Q + RGRR + L KQD+LD +NERD +
Sbjct: 305 EDSIQVVKSMRAASPPSYTLDLGESQLAPPPSKLRGRRGSRRQLLTKQDSLDIYNERDLF 364
Query: 374 KADDSREEEEEN---DDDNSLEGETFPLERDEVMPPP-LQHP-QTDRLTCPKGLPWAPKV 428
K ++ EEEE D + +L+GE LE+D ++PPP Q P +R+ PKGLPWAPKV
Sbjct: 365 KTEEPATEEEEESAGDGERTLDGELDLLEQDPLVPPPPSQAPLSAERVAFPKGLPWAPKV 424
Query: 429 REKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAEVQAQMEEE 488
R+KDIE FLE SR+KFIG+TLG DT+T+VGLPRPIHES+KTLKQHKY SIA+VQ + EEE
Sbjct: 425 RQKDIEHFLEMSRNKFIGFTLGQDTDTLVGLPRPIHESVKTLKQHKYISIADVQIKNEEE 484
Query: 489 YLRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTDSINILADV 548
+ P+S GEE V + P E LYQG+L SLPQYMIALLKILLAAAPTSKAKTDSINILADV
Sbjct: 485 LEKCPMSLGEEVVPETPCEILYQGMLYSLPQYMIALLKILLAAAPTSKAKTDSINILADV 544
Query: 549 LPEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKLNHVYQFEYMAQHLVFAN 608
LPEEMP TVLQSMKLG+DVNRHKE+IVK+IS +LLLLLKHFKLNH+YQFEY++QHLVFAN
Sbjct: 545 LPEEMPITVLQSMKLGIDVNRHKEIIVKSISTLLLLLLKHFKLNHIYQFEYVSQHLVFAN 604
Query: 609 CIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTAESLEAGDSNQFCWRNLFSC 668
CIPLILKFFNQNI+SYITAKNSISVLDYP C + +LPELT ESLEAGD++QFCWRNLFSC
Sbjct: 605 CIPLILKFFNQNILSYITAKNSISVLDYPCCTIQDLPELTTESLEAGDNSQFCWRNLFSC 664
Query: 669 INLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLGRQW 728
INLLR+LNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAM+QLYVLKLLK+QTKYLGRQW
Sbjct: 665 INLLRLLNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMLQLYVLKLLKLQTKYLGRQW 724
Query: 729 RKSNMKTMSAIYQKVRHRLNDDWAYGN 755
RKSNMKTMSAIYQKVRHR+NDDWAYGN
Sbjct: 725 RKSNMKTMSAIYQKVRHRMNDDWAYGN 751
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 47.4 bits (111), Expect = 6e-05
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 8 PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAA 40
P P++ N+ QP PPPPP PAAAQP P APR A
Sbjct: 90 PIPVVTNSPQPLPPPPPLPAAAQPLPLAPRQPA 122
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 47.0 bits (110), Expect = 7e-05
Identities = 20/30 (66%), Positives = 21/30 (70%)
Query: 17 QPQPPPPPPPAAAQPPPGAPRAAAGLLPGG 46
QPQPPPPPPPA+ QPPP P A LP G
Sbjct: 382 QPQPPPPPPPASQQPPPPPPPQAPVRLPPG 411
Score = 38.5 bits (88), Expect = 0.026
Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 18 PQPPPPPPPAAAQ---PPPGAPRAAAGLLPGG 46
PQP PPPPP A PPP P+A L PGG
Sbjct: 381 PQPQPPPPPPPASQQPPPPPPPQAPVRLPPGG 412
Score = 33.5 bits (75), Expect = 0.84
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 8 PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGG 46
P P ++QP PPPPPP A + PPG P + L G
Sbjct: 386 PPPPPPASQQP-PPPPPPQAPVRLPPGGPLLPSASLTRG 423
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 47.0 bits (110), Expect = 7e-05
Identities = 20/30 (66%), Positives = 21/30 (70%)
Query: 17 QPQPPPPPPPAAAQPPPGAPRAAAGLLPGG 46
QPQPPPPPPPA+ QPPP P A LP G
Sbjct: 366 QPQPPPPPPPASQQPPPPPPPQAPVRLPPG 395
Score = 38.5 bits (88), Expect = 0.026
Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 18 PQPPPPPPPAAAQ---PPPGAPRAAAGLLPGG 46
PQP PPPPP A PPP P+A L PGG
Sbjct: 365 PQPQPPPPPPPASQQPPPPPPPQAPVRLPPGG 396
Score = 33.5 bits (75), Expect = 0.84
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 8 PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGG 46
P P ++QP PPPPPP A + PPG P + L G
Sbjct: 370 PPPPPPASQQP-PPPPPPQAPVRLPPGGPLLPSASLTRG 407
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 42.7 bits (99), Expect = 0.001
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 2 EPAVGGPGPLIVNNKQPQPPPP----PPPAAAQPPPGAPRAAAGL 42
+PA+ P PL+ PPPP PPPA PPP P AAA L
Sbjct: 1479 QPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPL 1523
Score = 34.7 bits (78), Expect = 0.38
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 6 GGPGPLIVNNKQPQPPPPPPPAAAQPPPGAP 36
G P P ++ K P PPP P QPPP P
Sbjct: 1446 GTPEPPLLEEKPPPTPPPAPTPQPQPPPPPP 1476
Score = 34.7 bits (78), Expect = 0.38
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 8 PGPLIVNNKQPQPPPPPP---PAAAQPPP 33
P P QPQPPPPPP PA PPP
Sbjct: 1459 PTPPPAPTPQPQPPPPPPPPQPALPSPPP 1487
Score = 32.7 bits (73), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 18 PQPPPPPPPAAAQPPPG 34
P PPPPPPPA A P G
Sbjct: 1041 PPPPPPPPPAPASEPKG 1057
Score = 31.2 bits (69), Expect = 4.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 10 PLIVNNKQPQPPPPPPPAAAQPPPGAP 36
PL+ P PPP P P PPP P
Sbjct: 1451 PLLEEKPPPTPPPAPTPQPQPPPPPPP 1477
Score = 30.4 bits (67), Expect = 7.1
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 1 MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGKAREFNRNQRKDSE 60
+EPA P QP PPPPPPP A + GL P + + D
Sbjct: 824 LEPATRDGAP------QPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPP 877
Query: 61 G 61
G
Sbjct: 878 G 878
Score = 30.4 bits (67), Expect = 7.1
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 4/20 (20%)
Query: 17 QPQPPPPPPPAAAQPPPGAP 36
Q PPPPPPP PPP AP
Sbjct: 1036 QAAPPPPPPP----PPPPAP 1051
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 42.4 bits (98), Expect = 0.002
Identities = 21/36 (58%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 18 PQPPPPPPPAAAQ---PPPGAPRAAAGLLPGGKARE 50
P PPPPPPPA Q PPPG+P AG PGG E
Sbjct: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAG-SPGGLGLE 688
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 10 PLIVNNKQPQPPPPPPPAAAQPPPGAPRAA--AGLLPGGKAR 49
P++V P PPP PA A G A AG PGG A+
Sbjct: 546 PVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ 587
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 42.4 bits (98), Expect = 0.002
Identities = 21/36 (58%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 18 PQPPPPPPPAAAQ---PPPGAPRAAAGLLPGGKARE 50
P PPPPPPPA Q PPPG+P AG PGG E
Sbjct: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAG-SPGGLGLE 688
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 10 PLIVNNKQPQPPPPPPPAAAQPPPGAPRAA--AGLLPGGKAR 49
P++V P PPP PA A G A AG PGG A+
Sbjct: 546 PVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ 587
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 42.4 bits (98), Expect = 0.002
Identities = 21/36 (58%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 18 PQPPPPPPPAAAQ---PPPGAPRAAAGLLPGGKARE 50
P PPPPPPPA Q PPPG+P AG PGG E
Sbjct: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAG-SPGGLGLE 688
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 10 PLIVNNKQPQPPPPPPPAAAQPPPGAPRAA--AGLLPGGKAR 49
P++V P PPP PA A G A AG PGG A+
Sbjct: 546 PVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ 587
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 42.4 bits (98), Expect = 0.002
Identities = 21/36 (58%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 18 PQPPPPPPPAAAQ---PPPGAPRAAAGLLPGGKARE 50
P PPPPPPPA Q PPPG+P AG PGG E
Sbjct: 660 PPPPPPPPPAPEQQTMPPPGSPSGGAG-SPGGLGLE 694
Score = 30.8 bits (68), Expect = 5.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 10 PLIVNNKQPQPPPPPPPAAAQPPPGAPRAA--AGLLPGGKAR 49
P++V P PPP PA A G A AG PGG A+
Sbjct: 552 PVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ 593
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 41.6 bits (96), Expect = 0.003
Identities = 19/24 (79%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 17 QPQPPPPPPPAAAQPPPGAPRAAA 40
QPQPPPPPPPAA QPP P AAA
Sbjct: 26 QPQPPPPPPPAAPQPPQ-PPTAAA 48
Score = 30.8 bits (68), Expect = 5.4
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 19 QPPPPPPPAAAQPPPGAPRAA 39
QPP PP A QPPP P AA
Sbjct: 17 QPPQAPPQAQPQPPPPPPPAA 37
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 40.8 bits (94), Expect = 0.005
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 3 PAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAP 36
P+V G GP+ P PPPPPPP PPPG P
Sbjct: 363 PSVLGVGPVA----PPPPPPPPPPPGPPPPPGLP 392
Score = 32.7 bits (73), Expect = 1.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 12 IVNNKQPQPPPPPPPAAAQPPPGAP 36
+ N + Q PPPPPP+ PPP P
Sbjct: 268 VKNELRRQAPPPPPPSRGGPPPPPP 292
Score = 31.6 bits (70), Expect = 3.2
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 8 PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGKA 48
P P + P PPPPPP + PPP A A P +A
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRA 317
Score = 31.6 bits (70), Expect = 3.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 6 GGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLP 44
G P P P PPP P AA PPP R + + P
Sbjct: 298 GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPP 336
Score = 31.2 bits (69), Expect = 4.2
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 3 PAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAP 36
P+ P P V P PPPPPP PPPG P
Sbjct: 355 PSGPPPPPPSVLGVGPVAPPPPPP--PPPPPGPP 386
Score = 30.8 bits (68), Expect = 5.4
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 8 PGPLIVNNKQPQPPPPPPPA------AAQPPPGAPRAAAGLLP 44
P P + + P PPPPPP+ A PPP P G P
Sbjct: 345 PPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPP 387
Score = 30.4 bits (67), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 16 KQPQPPPPPPPAAAQPPPGAPRAAAGLLP 44
++ PPPPPP PPP P +G P
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPPPHNSGPPP 301
Score = 30.4 bits (67), Expect = 7.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 20 PPPPPPPAAAQPPPGAPRAAAGLLPGGKAR 49
PPPPPPP PP P G P +R
Sbjct: 287 PPPPPPPPHNSGPPPPPARGRGAPPPPPSR 316
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 40.8 bits (94), Expect = 0.005
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 11/53 (20%)
Query: 6 GGPGPLI------VNNKQPQPPPP--PPPAAAQP---PPGAPRAAAGLLPGGK 47
GGPG + V+N +PQPPPP PPP AQP P PRA + P G+
Sbjct: 1154 GGPGSGVDAKAGWVDNTRPQPPPPPLPPPPEAQPRRLEPAPPRARPEVAPEGE 1206
Score = 33.5 bits (75), Expect = 0.84
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 1 MEPAVGGPGPLIVNNKQPQ--PPPPPPPAAAQPPPGAPRAAAGLLPGGKAREFNRNQRKD 58
++P +G P P PPPPPPP A P +P + + G + D
Sbjct: 762 LDPLMGAAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGD 821
Query: 59 SEGYSESP 66
S +E+P
Sbjct: 822 SGYETETP 829
Score = 30.8 bits (68), Expect = 5.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 12 IVNNKQPQPPPPPPPAAAQPPPGA-PRAAAGLLPGGKAREF 51
+++ + P+PPPPPPP P P P A + PG + F
Sbjct: 440 LLSERPPRPPPPPPPPRDGPFPWPWPPAHSAPRPGTLSSPF 480
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 40.4 bits (93), Expect = 0.007
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 336 PPASASDLIEQQQKRGRREHKALIKQDNLDAFNERDPYKADDSREEEEENDDDNSLEGET 395
PP+ + + Q + EH+A K+D+L+A N + D R EE D+D LE E
Sbjct: 19 PPSWTDECLSSQDE----EHEADKKEDDLEAMNAEE----DSLRNGGEEEDEDEDLEEEE 70
Query: 396 FPLERDEVMPPPLQHPQTDRLT 417
E D+ P + P+ ++T
Sbjct: 71 EEEEEDDDQKPKRRGPKKKKMT 92
>gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase
4 [Homo sapiens]
Length = 456
Score = 40.0 bits (92), Expect = 0.009
Identities = 15/18 (83%), Positives = 15/18 (83%)
Query: 18 PQPPPPPPPAAAQPPPGA 35
P PPPPPPP AA PPPGA
Sbjct: 8 PPPPPPPPPLAAPPPPGA 25
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 40.0 bits (92), Expect = 0.009
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 20 PPPPPPPAAAQPPPGAPR--AAAGLLPGGK---AREFNRNQRKDSEGYSESP 66
PPPPPPPA +PPP AP AA G GG AR + Q+ S ++ P
Sbjct: 97 PPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPGARRSDFLQKTGSNSFTVHP 148
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 40.0 bits (92), Expect = 0.009
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 20 PPPPPPPAAAQPPPGAPR--AAAGLLPGGK---AREFNRNQRKDSEGYSESP 66
PPPPPPPA +PPP AP AA G GG AR + Q+ S ++ P
Sbjct: 97 PPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPGARRSDFLQKTGSNSFTVHP 148
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 39.7 bits (91), Expect = 0.012
Identities = 18/38 (47%), Positives = 19/38 (50%)
Query: 8 PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPG 45
P P P PPPPPPPA+A P P A GL G
Sbjct: 74 PPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAG 111
Score = 37.4 bits (85), Expect = 0.058
Identities = 21/46 (45%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 8 PGPLIVNNKQPQPPPPPPP-----AAAQPPPGAPRAAAGLLPGGKA 48
P P P PPPPPPP A A PP P AAG P G A
Sbjct: 73 PPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGA 118
Score = 35.8 bits (81), Expect = 0.17
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 20 PPPPPPPAAAQPPPGAP 36
PPPPPPPA A PPP P
Sbjct: 71 PPPPPPPATAAPPPPPP 87
Score = 32.7 bits (73), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 20 PPPPPPPAAAQPPPGAP 36
PPPPPP AA PPP P
Sbjct: 72 PPPPPPATAAPPPPPPP 88
Score = 31.6 bits (70), Expect = 3.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 18 PQPPPPPPPAAAQPPPGAP 36
P PPPPP AA PPP P
Sbjct: 71 PPPPPPPATAAPPPPPPPP 89
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 39.7 bits (91), Expect = 0.012
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 8 PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGK 47
P +V+ P PPPPPPP A PPP P LP +
Sbjct: 2010 PNKALVHPPPPPPPPPPPPLALPPPPPPPPPLPPPLPNAE 2049
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 39.3 bits (90), Expect = 0.015
Identities = 19/44 (43%), Positives = 22/44 (50%)
Query: 1 MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLP 44
+ P G P P + + P PPPPPPP Q PP P A LP
Sbjct: 330 LPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 373
Score = 34.3 bits (77), Expect = 0.49
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 8 PGPLIVNNKQPQPPPPPP-----PAAAQPPPGAPRAAAG 41
P P + + P PPPPPP P PPP P A+G
Sbjct: 338 PPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASG 376
Score = 31.6 bits (70), Expect = 3.2
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 6/32 (18%)
Query: 11 LIVNNKQPQPPPPPPPAAAQ------PPPGAP 36
+++ P PPPP PP AQ PPPG P
Sbjct: 306 IVLGPLAPPPPPPLPPGPAQASVALPPPPGPP 337
Score = 30.8 bits (68), Expect = 5.4
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 3 PAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAP 36
P GP V P PPPPPP + PP P
Sbjct: 318 PLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPP 351
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 39.3 bits (90), Expect = 0.015
Identities = 19/44 (43%), Positives = 22/44 (50%)
Query: 1 MEPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLP 44
+ P G P P + + P PPPPPPP Q PP P A LP
Sbjct: 330 LPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLP 373
Score = 34.3 bits (77), Expect = 0.49
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 8 PGPLIVNNKQPQPPPPPP-----PAAAQPPPGAPRAAAG 41
P P + + P PPPPPP P PPP P A+G
Sbjct: 338 PPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASG 376
Score = 31.6 bits (70), Expect = 3.2
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 6/32 (18%)
Query: 11 LIVNNKQPQPPPPPPPAAAQ------PPPGAP 36
+++ P PPPP PP AQ PPPG P
Sbjct: 306 IVLGPLAPPPPPPLPPGPAQASVALPPPPGPP 337
Score = 30.8 bits (68), Expect = 5.4
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 3 PAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAP 36
P GP V P PPPPPP + PP P
Sbjct: 318 PLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPP 351
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 39.3 bits (90), Expect = 0.015
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
Query: 2 EPAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGG 46
+PAV P P PQP PPPPP PP P+AA P G
Sbjct: 2500 QPAVAQPPP-------PQPQPPPPPQQPPPPLPQPQAAGSQPPAG 2537
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 39.3 bits (90), Expect = 0.015
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 8 PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAA 40
P P + + P PPPPPAAA PPP AP A
Sbjct: 109 PDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTA 141
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 39.3 bits (90), Expect = 0.015
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 8/40 (20%)
Query: 3 PAVGGP--------GPLIVNNKQPQPPPPPPPAAAQPPPG 34
PA+G P P + QP PPPPPPP AA PPG
Sbjct: 193 PAMGSPLSPLPNALPPALHGAPQPPPPPPPPPLAAYGPPG 232
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 38.9 bits (89), Expect = 0.020
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 10/49 (20%)
Query: 3 PAVGGPGPLIVNNKQPQPPPPPPPAAAQ---PPPGAPR--AAAGLLPGG 46
P GGP P+ P PPPPPPP++ PPP P A GL PGG
Sbjct: 386 PGAGGP-PM----PPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGG 429
Score = 32.7 bits (73), Expect = 1.4
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 3 PAVGG---------PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAA--AGLLP 44
P VGG P PL + P P PPPP PPP P A +G LP
Sbjct: 330 PIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLP 382
Score = 32.7 bits (73), Expect = 1.4
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
Query: 3 PAVGGPGPL---IVNNKQPQPPPPP----PPAAAQPPPGAPRAAAG 41
P GGP P P PPPPP PP PPP P ++G
Sbjct: 362 PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSG 407
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 38.9 bits (89), Expect = 0.020
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 3 PAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAG 41
P GGP P P PPP PPP PP G P AA G
Sbjct: 165 PPAGGPPP----PPGPPPPPGPPPPPGLPPSGVPAAAHG 199
Score = 32.7 bits (73), Expect = 1.4
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 6 GGPGPLIVNNKQPQPPPPPPPAAAQPPPGAP 36
GGP P P PPPPP PPPG P
Sbjct: 160 GGPPAPPAGGPPPPPGPPPPPG-PPPPPGLP 189
Score = 32.0 bits (71), Expect = 2.4
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 20 PPPPPPPAAAQPPPGAPRAAAGL---LPGGKAREFNRNQRKDSEGYSESPDLE 69
PPP PP AAQ P G A GL + G K R+ ++ ++++ G +P E
Sbjct: 204 PPPAPPLPAAQGPGGGGAGAPGLAAAIAGAKLRKVSK--QEEASGGPTAPKAE 254
Score = 31.6 bits (70), Expect = 3.2
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 13 VNNKQPQPPPP---PPPAAAQPPPGAPRAAAGLLPGG 46
V+N P PP PPP PPP P GL P G
Sbjct: 156 VSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSG 192
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 38.9 bits (89), Expect = 0.020
Identities = 17/39 (43%), Positives = 19/39 (48%)
Query: 8 PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGG 46
P P + P PPPP PP PPPG P A + P G
Sbjct: 553 PPPPLPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPPPG 591
Score = 37.0 bits (84), Expect = 0.076
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 3 PAVGG----PGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAA 40
P GG P P + P PP PPP A PPPGAP A
Sbjct: 556 PLPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPPPGAPMGLA 597
Score = 35.8 bits (81), Expect = 0.17
Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 4 AVGGPGPLIV-NNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGG 46
A GGP P V + P PPPPP P PPP P L PGG
Sbjct: 535 APGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPP-----LPPGG 573
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 38.5 bits (88), Expect = 0.026
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 4 AVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGKAR 49
A+G GP + P PPPPPPPA PG P A PG + R
Sbjct: 113 ALGAVGPGL-----PTPPPPPPPAPQSQAPGGPEAQPFREPGLRPR 153
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 38.5 bits (88), Expect = 0.026
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 3 PAVGGPGPLIVNNKQPQPPPPPPPAAAQPPPGAPRAAAGLLPGGKARE 50
P G GP+ P PPPPPPP PP R + L PG KA++
Sbjct: 593 PPPGTDGPV------PPPPPPPPPPPGGPPDALGRRDSELGPGVKAKK 634
Score = 30.8 bits (68), Expect = 5.4
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 2 EPAVGG---PGPLIVNNKQPQPPPPPPPAAAQPPPGAPR-AAAGLLPG 45
EPA G P P + PQ PP P A P PG+P A LPG
Sbjct: 535 EPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPG 582
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,987,272
Number of Sequences: 37866
Number of extensions: 1812531
Number of successful extensions: 29886
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 292
Number of HSP's that attempted gapping in prelim test: 20205
Number of HSP's gapped (non-prelim): 6559
length of query: 837
length of database: 18,247,518
effective HSP length: 111
effective length of query: 726
effective length of database: 14,044,392
effective search space: 10196228592
effective search space used: 10196228592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.