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Search of human proteins with 56606131
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56606131 tubulin tyrosine ligase-like family, member 9 [Homo
sapiens]
(439 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56606131 tubulin tyrosine ligase-like family, member 9 [Homo ... 915 0.0
gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo ... 287 2e-77
gi|195963418 tubulin tyrosine ligase-like family, member 6 isofo... 158 1e-38
gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo ... 154 2e-37
gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo ... 145 7e-35
gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo... 145 9e-35
gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo... 132 5e-31
gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo ... 127 2e-29
gi|194239681 tubulin tyrosine ligase-like family, member 10 isof... 101 2e-21
gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo... 99 6e-21
gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo... 95 1e-19
gi|24308516 tubulin tyrosine ligase [Homo sapiens] 83 6e-16
gi|212720861 tubulin tyrosine ligase-like family, member 11 a [H... 79 8e-15
gi|195963416 tubulin tyrosine ligase-like family, member 6 isofo... 79 1e-14
gi|194239678 tubulin tyrosine ligase-like family, member 10 isof... 78 1e-14
gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Ho... 51 2e-06
gi|22550104 ubiquitin specific protease 32 [Homo sapiens] 32 1.1
gi|5174617 nucleotide-binding oligomerization domain containing ... 31 2.5
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 30 4.3
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 30 4.3
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens] 30 5.7
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens] 30 5.7
gi|21536346 T-cell leukemia/lymphoma 6 isoform TCL6d1 [Homo sapi... 30 5.7
gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens] 30 5.7
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens] 29 7.4
gi|110347451 platelet/endothelial cell adhesion molecule [Homo s... 29 9.7
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 29 9.7
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 29 9.7
>gi|56606131 tubulin tyrosine ligase-like family, member 9 [Homo
sapiens]
Length = 439
Score = 915 bits (2364), Expect = 0.0
Identities = 439/439 (100%), Positives = 439/439 (100%)
Query: 1 MVPSREALLGPGTTAIRCPKKLQNQNYKGHGLSKGKEREQRASIRFKTTLMNTLMDVLRH 60
MVPSREALLGPGTTAIRCPKKLQNQNYKGHGLSKGKEREQRASIRFKTTLMNTLMDVLRH
Sbjct: 1 MVPSREALLGPGTTAIRCPKKLQNQNYKGHGLSKGKEREQRASIRFKTTLMNTLMDVLRH 60
Query: 61 RPGWVEVKDEGEWDFYWCDVSWLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRF 120
RPGWVEVKDEGEWDFYWCDVSWLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRF
Sbjct: 61 RPGWVEVKDEGEWDFYWCDVSWLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRF 120
Query: 121 RKQLEREAGKLEAAKCDFFPKTFEMPCEYHLFVEEFRKNPGITWIMKPVARSQGKGIFLF 180
RKQLEREAGKLEAAKCDFFPKTFEMPCEYHLFVEEFRKNPGITWIMKPVARSQGKGIFLF
Sbjct: 121 RKQLEREAGKLEAAKCDFFPKTFEMPCEYHLFVEEFRKNPGITWIMKPVARSQGKGIFLF 180
Query: 181 RRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYVLVMSVFAEC 240
RRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYVLVMSVFAEC
Sbjct: 181 RRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYVLVMSVFAEC 240
Query: 241 LLWSGHRRQDVHLTNVAVQKTSPDYHPKKGCKWTLQRFRQYLASKHGPEAVETLFRDIDN 300
LLWSGHRRQDVHLTNVAVQKTSPDYHPKKGCKWTLQRFRQYLASKHGPEAVETLFRDIDN
Sbjct: 241 LLWSGHRRQDVHLTNVAVQKTSPDYHPKKGCKWTLQRFRQYLASKHGPEAVETLFRDIDN 300
Query: 301 IFVKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCL 360
IFVKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCL
Sbjct: 301 IFVKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCL 360
Query: 361 LEDTLHVVDMEARLTGREKRVGGFDLMWNDGPVSREEGAPDLSGMGNFVTNTHLGCVNDR 420
LEDTLHVVDMEARLTGREKRVGGFDLMWNDGPVSREEGAPDLSGMGNFVTNTHLGCVNDR
Sbjct: 361 LEDTLHVVDMEARLTGREKRVGGFDLMWNDGPVSREEGAPDLSGMGNFVTNTHLGCVNDR 420
Query: 421 KKQLRQLFCSLQVQKKASS 439
KKQLRQLFCSLQVQKKASS
Sbjct: 421 KKQLRQLFCSLQVQKKASS 439
>gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo
sapiens]
Length = 423
Score = 287 bits (734), Expect = 2e-77
Identities = 164/374 (43%), Positives = 215/374 (57%), Gaps = 44/374 (11%)
Query: 47 KTTLMNTLMDVLRHRPGWVEVKDEGEWDFYWCDVSWLRENFD----HTYMDEHVRISHFR 102
K+ L+N + GWV+V + +W+FYW V +R F + D+ + ++HF
Sbjct: 13 KSVLINNF-----EKRGWVQVTENEDWNFYWMSVQTIRNVFSVEAGYRLSDDQI-VNHFP 66
Query: 103 NHYELTRKNYMVKNLKRFRKQLEREAGKL----EAAK---CDFFPKTFEMPCEYHLFVEE 155
NHYELTRK+ MVKN+KR+RK+LE+E L E K DF P T+ +P +Y+LFVEE
Sbjct: 67 NHYELTRKDLMVKNIKRYRKELEKEGSPLAEKDENGKYLYLDFVPVTYMLPADYNLFVEE 126
Query: 156 FRKNPGITWIMKPVARSQGKGIFLFRRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIE 215
FRK+P TWIMKP ++QGKGIFL +L I W +D+++S E YV YI
Sbjct: 127 FRKSPSSTWIMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSNK-EAYVISLYIN 185
Query: 216 NPYLIGGRKFDLRVYVLVMSVFA-ECLLW----------------SGHRRQDVHLTNVAV 258
NP LIGGRKFDLR+YVLV + C ++ S VHLTNVA+
Sbjct: 186 NPLLIGGRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSELDNMFVHLTNVAI 245
Query: 259 QKTSPDYHPKKGCKWTLQRFRQYLASKHGPEAVETLFRDIDNIFVKSLQSVQKVIISDKH 318
QK DY+ G KWT+ R YL S G E LF +I I V+SL++V V+ +DKH
Sbjct: 246 QKHGEDYNHIHGGKWTVSNLRLYLESTRGKEVTSKLFDEIHWIIVQSLKAVAPVMNNDKH 305
Query: 319 CFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCLLEDTLHVVDMEARLTGRE 378
CFE YGYDI+ID LKPWL+EVNASPSLT+S+ D LK L+ DTL++ +
Sbjct: 306 CFECYGYDIIIDDKLKPWLIEVNASPSLTSSTANDRILKYNLINDTLNIAVPNGEIP--- 362
Query: 379 KRVGGFDLMWNDGP 392
D WN P
Sbjct: 363 ------DCKWNKSP 370
>gi|195963418 tubulin tyrosine ligase-like family, member 6 isoform
1 [Homo sapiens]
Length = 891
Score = 158 bits (399), Expect = 1e-38
Identities = 120/382 (31%), Positives = 186/382 (48%), Gaps = 64/382 (16%)
Query: 22 LQNQNYKGHGLSKGKEREQRASIRFKTTLMNTLMDVLRHRPGWVEVKDEGEWDFYWCDVS 81
LQN +G K K +++R I + ++ + G+ E ++ +W YW D S
Sbjct: 93 LQNAQQQG----KKKRKKKRLVINLSSCRYESVRRAAQQY-GFREGGEDDDWTLYWTDYS 147
Query: 82 WLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCDFFPK 141
E M + +I+HF E+ RK+ + +N+ R K ++ FFP+
Sbjct: 148 VSLERVME--MKSYQKINHFPGMSEICRKDLLARNMSRMLKMFPKDFR--------FFPR 197
Query: 142 TFEMPCEYHLFVEEFRKNPGITWIMKPVARSQGKGIFLFRRLKDIVDWRKDTRSSDDQKD 201
T+ +P ++ R T+I KP + QGKGIF+ R +K+I
Sbjct: 198 TWCLPADWGDLQTYSRSRKNKTYICKPDSGCQGKGIFITRTVKEIK-------------- 243
Query: 202 DIPVENYVAQRYIENPYLIGGRKFDLRVYVLVMS-------VFAECL---LWSGHRR--- 248
P E+ + Q YI P++I G KFDLR+YVLV S V+ E L + + R
Sbjct: 244 --PGEDMICQLYISKPFIIDGFKFDLRIYVLVTSCDPLRIFVYNEGLARFATTSYSRPCT 301
Query: 249 ---QDV--HLTNVAVQKTSPDY--HPKKGCKWTLQRFRQYLASKHGPEAVETLFRDIDNI 301
D+ HLTN ++ K S ++ G K L F YL + VE ++RDI+++
Sbjct: 302 DNLDDICMHLTNYSINKHSSNFSRDAHSGSKRKLSTFSAYL--EDHSYNVEQIWRDIEDV 359
Query: 302 FVKSLQSVQKVIISDKH-----------CFELYGYDILIDQDLKPWLLEVNASPSLTASS 350
+K+L S +I + H CFE+ G+DIL+D LKPWLLEVN SPS + S
Sbjct: 360 IIKTLISAHPIIRHNYHTCFPNHTLNSACFEILGFDILLDHKLKPWLLEVNHSPSFSTDS 419
Query: 351 QEDYELKTCLLEDTLHVVDMEA 372
+ D E+K LL DTL ++++E+
Sbjct: 420 RLDKEVKDGLLYDTLVLINLES 441
>gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo
sapiens]
Length = 592
Score = 154 bits (389), Expect = 2e-37
Identities = 115/365 (31%), Positives = 175/365 (47%), Gaps = 59/365 (16%)
Query: 45 RFKTTLMNTLMDVLRHRPGW----VEVKDEGEWDFYWCDVSWLRENFDHTYMDEHVRISH 100
R T + VL R GW + ++ +W+ YW S+ +H + +++H
Sbjct: 90 RVDETTPAVVQSVLLER-GWNKFDKQEQNAEDWNLYWRTSSFRMT--EHNSVKPWQQLNH 146
Query: 101 FRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCDFFPKTFEMPCEYHLFVEEFRKNP 160
+LTRK+ + K+LK R+ + F P TF MP +Y FV E+ +
Sbjct: 147 HPGTTKLTRKDCLAKHLKHMRRMYG-------TSLYQFIPLTFVMPNDYTKFVAEYFQER 199
Query: 161 GIT------WIMKPVARSQGKGIFLFRRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRYI 214
+ WI KP S+G+GI +F KD + DD+ Y+ Q+YI
Sbjct: 200 QMLGTKHSYWICKPAELSRGRGILIFSDFKDFIF------------DDM----YIVQKYI 243
Query: 215 ENPYLIGGRKFDLRVYV-------LVMSVFAECLLWSGHRRQDV--------HLTNVAVQ 259
NP LIG K DLR+YV L + V+ E L+ + D+ HLTN ++
Sbjct: 244 SNPLLIGRYKCDLRIYVCVTGFKPLTIYVYQEGLVRFATEKFDLSNLQNNYAHLTNSSIN 303
Query: 260 KTSPDYHPKK-----GCKWTLQRFRQYLASKHGPEAVETLFRDIDNIFVKSLQSVQKVII 314
K+ Y K GCKWTL RF YL S + + L++ I + + ++ ++ +
Sbjct: 304 KSGASYEKIKEVIGHGCKWTLSRFFSYLRSWDVDDLL--LWKKIHRMVILTILAIAPSVP 361
Query: 315 SDKHCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCLLEDTLHVVDMEA-R 373
+CFEL+G+DILID +LKPWLLEVN SP+LT D +K L+ D + ++ + R
Sbjct: 362 FAANCFELFGFDILIDDNLKPWLLEVNYSPALTLDCSTDVLVKRKLVHDIIDLIYLNGLR 421
Query: 374 LTGRE 378
GRE
Sbjct: 422 NEGRE 426
>gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo
sapiens]
Length = 1281
Score = 145 bits (366), Expect = 7e-35
Identities = 104/309 (33%), Positives = 148/309 (47%), Gaps = 58/309 (18%)
Query: 92 MDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCDFFPKTFEMPCEYHL 151
+ E +++HF YELTRK+ + KN+ R + +A + P+TF +P EY
Sbjct: 113 LSEAQKVNHFPRSYELTRKDRLYKNIIRMQHTHGFKAFHI-------LPQTFLLPAEYAE 165
Query: 152 FVEEFRKNPGITWIMKPVARSQGKGIFLFRRLKDIVDWRKDTRSSDDQKDDIPVENYVAQ 211
F + K+ G WI+KPVA S+G+G++L I EN +
Sbjct: 166 FCNSYSKDRG-PWIVKPVASSRGRGVYLINNPNQIS----------------LEENILVS 208
Query: 212 RYIENPYLIGGRKFDLRVYVLVMSV--------------FAECLLWSGH---RRQDVHLT 254
RYI NP LI KFD+R+YVLV S FA G R Q +HLT
Sbjct: 209 RYINNPLLIDDFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQGAKNIRNQFMHLT 268
Query: 255 NVAVQKTSPDY----HPKK---GCKWTLQRFRQYLASKHGPEAVETLFRDIDNIFVKSLQ 307
N +V K S DY P+ G KW++ +YL K L ++++ +K++
Sbjct: 269 NYSVNKKSGDYVSCDDPEVEDYGNKWSMSAMLRYL--KQEGRDTTALMAHVEDLIIKTII 326
Query: 308 SVQKVIISD--------KHCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTC 359
S + I + CFELYG+D+LID LKPWLLEVN SPSL + D ++K
Sbjct: 327 SAELAIATACKTFVPHRSSCFELYGFDVLIDSTLKPWLLEVNLSPSLACDAPLDLKIKAS 386
Query: 360 LLEDTLHVV 368
++ D VV
Sbjct: 387 MISDMFTVV 395
>gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo
sapiens]
Length = 459
Score = 145 bits (365), Expect = 9e-35
Identities = 124/402 (30%), Positives = 184/402 (45%), Gaps = 69/402 (17%)
Query: 15 AIRCPKKLQNQNYKGHGLSKGKEREQRASIRFKTTLMNTLMDVLRHRP---GWVEVKDEG 71
A + PKK+ G L G+ + +R L N + +R G EV ++
Sbjct: 58 ATKIPKKVIAPVDTGD-LEAGRRKRRRKRRSLAINLTNCKYESVRRAAQMCGLKEVGEDE 116
Query: 72 EWDFYWCDVSWLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKL 131
EW YW D + E M +I+HF E+ RK+ + +NL R K L
Sbjct: 117 EWTLYWTDCAVSLERVMD--MKRFQKINHFPGMTEICRKDLLARNLNRMYK--------L 166
Query: 132 EAAKCDFFPKTFEMPCEYHLFVEEFRKNPGITWIMKPVARSQGKGIFLFRRLKDIVDWRK 191
++ + FP+T+ +P +Y F R+ T+I KP + QG+GIF+ R ++I
Sbjct: 167 YPSEYNIFPRTWCLPADYGDFQSYGRQRKARTYICKPDSGCQGRGIFITRNPREIK---- 222
Query: 192 DTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYVLVMS-------VFAECL--- 241
P E+ + Q+YI P LI G KFD+RVYVL+ S + E L
Sbjct: 223 ------------PGEHMICQQYISKPLLIDGFKFDMRVYVLITSCDPLRIFTYEEGLARF 270
Query: 242 -----LWSGHRRQD---VHLTNVAVQKTSPDY--HPKKGCKWTLQRFRQYLASKHGPEAV 291
+ H D +HLTN A+ K + ++ G K L +L +H
Sbjct: 271 ATTPYMEPSHNNLDNVCMHLTNYAINKHNENFVRDGAVGSKRKLSTLNIWL-QEHSYNPG 329
Query: 292 ETLFRDIDNIFVKSLQSVQKVIISDKH-------------CFELYGYDILIDQDLKPWLL 338
E L+ DI++I +K++ S V+ + CFE+ G+DIL+D LKPWLL
Sbjct: 330 E-LWGDIEDIIIKTIISAHSVLRHNYRTCFPQYLNGGTCACFEILGFDILLDHKLKPWLL 388
Query: 339 EVNASPSLTASSQEDYELKTCLLEDTLHVVDMEARLTGREKR 380
EVN SPS T S D E+K LL D + +V+ L G +KR
Sbjct: 389 EVNHSPSFTTDSCLDQEVKDALLCDAMTLVN----LRGCDKR 426
>gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo
sapiens]
Length = 1199
Score = 132 bits (333), Expect = 5e-31
Identities = 92/305 (30%), Positives = 152/305 (49%), Gaps = 56/305 (18%)
Query: 94 EHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCDFFPKTFEMPCEYHLFV 153
EH +++HF +++ RK+ + +NL R + + GK E + FFP++F +P + L
Sbjct: 655 EHQKLNHFPGSFQIGRKDRLWRNLSRMQSRF----GKKEFS---FFPQSFILPQDAKLLR 707
Query: 154 EEFRKNPGITWIMKPVARSQGKGIFLFRRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRY 213
+ + + WI+KP A ++G GI + + + R + QRY
Sbjct: 708 KAWESSSRQKWIVKPPASARGIGIQVIHKWSQLPKRRP----------------LLVQRY 751
Query: 214 IENPYLIGGRKFDLRVYVLVMSV--------------FAECLLWSGHR---RQDVHLTNV 256
+ PYLI G KFDLR+YV V S FA C + + +HLTN
Sbjct: 752 LHKPYLISGSKFDLRIYVYVTSYDPLRIYLFSDGLVRFASCKYSPSMKSLGNKFMHLTNY 811
Query: 257 AVQKTSPDYHPK------KGCKWTLQRFRQYLASKHGPEAVETLFRDIDNIFVKSLQSVQ 310
+V K + +Y +G KW L+ YL+ K G + + ++ I ++ VK++ S +
Sbjct: 812 SVNKKNAEYQANADEMACQGHKWALKALWNYLSQK-GVNS-DAIWEKIKDVVVKTIISSE 869
Query: 311 KVIIS--------DKHCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCLLE 362
+ S C EL+G+DI++D++LKPW+LEVN SPSL +SS D +K ++
Sbjct: 870 PYVTSLLKMYVRRPYSCHELFGFDIMLDENLKPWVLEVNISPSLHSSSPLDISIKGQMIR 929
Query: 363 DTLHV 367
D L++
Sbjct: 930 DLLNL 934
>gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo
sapiens]
Length = 887
Score = 127 bits (320), Expect = 2e-29
Identities = 104/382 (27%), Positives = 182/382 (47%), Gaps = 75/382 (19%)
Query: 34 KGKEREQRASIRFKTTLMNTLMDVLR---HRPGWVEVKDEGEW-DFYWCDVSWLRENFDH 89
K K R+++ + T +++R G+++ DE E + WCD + +E
Sbjct: 29 KRKVRKKKKKGTITANVAGTKFEIVRLVIDEMGFMKTPDEDETSNLIWCDSAVQQEKISE 88
Query: 90 TYMDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCDFFPKTFEMPCEY 149
+ + RI+HF E+ RK+++ +N+ + K + F P+T+ P EY
Sbjct: 89 --LQNYQRINHFPGMGEICRKDFLARNMTKMIKSRPLDY--------TFVPRTWIFPAEY 138
Query: 150 HLF---VEEFRKN-PGITWIMKPVARSQGKGIFLFRRLKDIVDWRKDTRSSDDQKDDIPV 205
F V+E +K T+I+KP + G GI L R D +P
Sbjct: 139 TQFQNYVKELKKKRKQKTFIVKPANGAMGHGISLIRN-----------------GDKLPS 181
Query: 206 ENY-VAQRYIENPYLIGGRKFDLRVYVLVMS-------VFAECLLWSGHRRQD------- 250
+++ + Q YIE P+L+ G KFDLR+Y+LV S ++ + L+ G +
Sbjct: 182 QDHLIVQEYIEKPFLMEGYKFDLRIYILVTSCDPLKIFLYHDGLVRMGTEKYIPPNESNL 241
Query: 251 ----VHLTNVAVQKTSPDYH----PKKGCKWTLQRFRQYL-ASKHGPEAVETLFRDIDNI 301
+HLTN +V K + + KG K +++ F ++L A++H V + DI +
Sbjct: 242 TQLYMHLTNYSVNKHNEHFERDETENKGSKRSIKWFTEFLQANQHD---VAKFWSDISEL 298
Query: 302 FVKSLQSVQKVII-------------SDKHCFELYGYDILIDQDLKPWLLEVNASPSLTA 348
VK+L + ++ S+ CFE+ G+DIL+D+ LKPWLLE+N +PS
Sbjct: 299 VVKTLIVAEPHVLHAYRMCRPGQPPGSESVCFEVLGFDILLDRKLKPWLLEINRAPSFGT 358
Query: 349 SSQEDYELKTCLLEDTLHVVDM 370
+ DY++K +L + L ++++
Sbjct: 359 DQKIDYDVKRGVLLNALKLLNI 380
>gi|194239681 tubulin tyrosine ligase-like family, member 10 isoform
1 [Homo sapiens]
Length = 673
Score = 101 bits (251), Expect = 2e-21
Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 38/264 (14%)
Query: 137 DFFPKTFEMPCEYH--LFVEEFRKNPGITWIMKPVARSQGKGIFLFRRLKDIVDWRKDTR 194
+FFP+T+ + ++ F F + WI KP A +QGKGIFL R +++ + TR
Sbjct: 283 EFFPETYRLDLKHEREAFFTLFDETQ--IWICKPTASNQGKGIFLLRNQEEVAALQAKTR 340
Query: 195 SSDDQKDDIPVENY---------VAQRYIENPYLIGGRKFDLRVYVLVMSVFAECLLWS- 244
S +D P+ + V QRYI+NP L+ GRKFD+R Y+L+ + +
Sbjct: 341 SMEDD----PIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIFFGH 396
Query: 245 GHRRQDV------------HLTNVAVQKTSPDYH-PKKGCKWTLQRFRQYLASKHGPE-- 289
G+ R + HLTN +QK SP Y K+ W+++ +Y++
Sbjct: 397 GYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLKEHTVWSMEHLNRYISDTFWKARG 456
Query: 290 -----AVETLFRDIDNIFVKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASP 344
TL + + I + + + F+L G D LID + K WLLE+N++P
Sbjct: 457 LAKDWVFTTLKKRMQQIMAHCFLAAKPKLDCKLGYFDLIGCDFLIDDNFKVWLLEMNSNP 516
Query: 345 SLTASSQEDYELKTCLLEDTLHVV 368
+L + + E+ ++ +TL +V
Sbjct: 517 ALHTNCEVLKEVIPGVVIETLDLV 540
>gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo
sapiens]
Length = 772
Score = 99.4 bits (246), Expect = 6e-21
Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 30/251 (11%)
Query: 164 WIMKPVARSQGKGIFLFRRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLIGGR 223
WI+KP A+S+G+GI L++++ + + KD +V Q+YIE P LI G
Sbjct: 280 WIVKPGAKSRGRGIMCMDHLEEML--KLVNGNPVVMKDG----KWVVQKYIERPLLIFGT 333
Query: 224 KFDLRVYVLVMSVFAECLLWS---------------GHRRQDVHLTNVAVQK---TSPDY 265
KFDLR + LV + +W + VHL N ++QK S
Sbjct: 334 KFDLRQWFLVTD-WNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQKHLENSCHR 392
Query: 266 HP--KKGCKWTLQRFRQYLASKHGPEAVETLF-RDIDNIFVKSLQSVQKVIISDKHCFEL 322
HP W+ QRF+ +L P A T+ + + + +LQ+ Q + K FEL
Sbjct: 393 HPLLPPDNMWSSQRFQAHLQEMGAPNAWSTIIVPGMKDAVIHALQTSQDTVQCRKASFEL 452
Query: 323 YGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCLLEDTLHVVDMEARLTGREKRVG 382
YG D + +D +PWL+E+NASP++ S+ L + DTL VV R+ R G
Sbjct: 453 YGADFVFGEDFQPWLIEINASPTMAPSTAVTARLCAGVQADTLRVV--IDRMLDRNCDTG 510
Query: 383 GFDLMWNDGPV 393
F+L++ V
Sbjct: 511 AFELIYKQPAV 521
>gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo
sapiens]
Length = 834
Score = 94.7 bits (234), Expect = 1e-19
Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 40/251 (15%)
Query: 164 WIMKPVARSQGKG----IFLFRRLKDIVDWRK-DTRSSDDQKDDIPVENYVAQRYIENPY 218
WI+KP A+S+G+G I R+++I++ D S D K +V Q+YIE P
Sbjct: 331 WIIKPAAKSRGRGESPDIVCMDRVEEILELAAADHPLSRDNK-------WVVQKYIETPL 383
Query: 219 LIGGRKFDLRVYVLVMS-------VFAECLLWSGHRR-------QDVHLTNVAVQKTSPD 264
LI KFD+R + LV + E L +R +HL N AVQK +
Sbjct: 384 LICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLDSAIHLCNNAVQKYLKN 443
Query: 265 YHPKKGC-----KWTLQRFRQYLASKHGPEAV--ETLFRDIDNIFVKSLQSVQKVIISDK 317
+ WT RF++YL + G AV ++ + +++ Q + K
Sbjct: 444 DVGRSPLLPAHNMWTSTRFQEYL-QRQGRGAVWGSVIYPSMKKAIAHAMKVAQDHVEPRK 502
Query: 318 HCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCLLEDTLHVVDMEARLTGR 377
+ FELYG D ++ +D +PWL+E+N+SP++ S+ +L + EDT+ V R
Sbjct: 503 NSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQEDTIKVA------VDR 556
Query: 378 EKRVGGFDLMW 388
+G F+L+W
Sbjct: 557 SCDIGNFELLW 567
>gi|24308516 tubulin tyrosine ligase [Homo sapiens]
Length = 377
Score = 82.8 bits (203), Expect = 6e-16
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 33/206 (16%)
Query: 161 GITWIMKPVARSQGKGIFLFRRLKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLI 220
G WI K A ++G+GI + +++D+ D+Q + +V Q+Y+E+P L+
Sbjct: 144 GNVWIAKSSAGAKGEGILISSEASELLDF------IDNQG-----QVHVIQKYLEHPLLL 192
Query: 221 --GGRKFDLRVYVLVMSVFAECLLWSGHRR-------------QDVHLTNVAVQKTSPDY 265
G RKFD+R +VLV + L G R + HLTN +QK
Sbjct: 193 EPGHRKFDIRSWVLVDHQYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEYSKN 252
Query: 266 HPK--KGCKWTLQRFRQYLASKHGPEAVETLFRDIDNIFVKSLQSVQKVIISDKHC---- 319
+ K +G + + F QYL S ++ I +I L SV+ I S KH
Sbjct: 253 YGKYEEGNEMFFKEFNQYLTSALNITLESSILLQIKHIIRNCLLSVEPAI-STKHLPYQS 311
Query: 320 FELYGYDILIDQDLKPWLLEVNASPS 345
F+L+G+D ++D++LK WL+EVN +P+
Sbjct: 312 FQLFGFDFMVDEELKVWLIEVNGAPA 337
>gi|212720861 tubulin tyrosine ligase-like family, member 11 a [Homo
sapiens]
Length = 800
Score = 79.0 bits (193), Expect = 8e-15
Identities = 87/337 (25%), Positives = 153/337 (45%), Gaps = 65/337 (19%)
Query: 78 CDVSWLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCD 137
CD+ W +F H +++ F E+ RK + + ++ + E +
Sbjct: 253 CDIYWHGVSF-HDNDIFSGQVNKFPGMTEMVRKITLSRAVRTMQNLFPEEY--------N 303
Query: 138 FFPKTFEMPCEYHLFVEEFR--KNPGITW----IMKPVARSQGKGIFLFRRLKDIVDWRK 191
F+P+++ +P E+ LFV + + K+ +W I+KP QG GI+L + DI
Sbjct: 304 FYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDI----- 358
Query: 192 DTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYVLVMSV--------------- 236
+ V Q YI P LI KFD+R+YVL+ S+
Sbjct: 359 ------RLAGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRF 412
Query: 237 ----FAECLLWSGHRRQDVHLTNVAVQKTSPDY----HPKKGCKWTLQRFRQYLASKHGP 288
+ E + HR +HLTN ++ S ++ G K T L+SK G
Sbjct: 413 CTEPYQEPTPKNLHRIF-MHLTNYSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSK-GV 470
Query: 289 EAVETLFRDIDNIFVKSLQSVQ---KVIISDK--------HCFELYGYDILIDQDLKPWL 337
+ ++ ++ DI ++ +K++ ++ KV CF++ G+DIL+ ++LKP L
Sbjct: 471 D-IKKVWSDIISVVIKTVIALTPELKVFYQSDIPTGRPGPTCFQILGFDILLMKNLKPIL 529
Query: 338 LEVNASPSLTASSQEDYELKTCLLEDTLHVVDMEARL 374
LEVNA+PS+ + ++EL + E+ +VD E ++
Sbjct: 530 LEVNANPSMRI--EHEHELSPGVFENVPSLVDEEVKV 564
>gi|195963416 tubulin tyrosine ligase-like family, member 6 isoform
2 [Homo sapiens]
Length = 584
Score = 78.6 bits (192), Expect = 1e-14
Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 11/93 (11%)
Query: 291 VETLFRDIDNIFVKSLQSVQKVIISDKH-----------CFELYGYDILIDQDLKPWLLE 339
VE ++RDI+++ +K+L S +I + H CFE+ G+DIL+D LKPWLLE
Sbjct: 42 VEQIWRDIEDVIIKTLISAHPIIRHNYHTCFPNHTLNSACFEILGFDILLDHKLKPWLLE 101
Query: 340 VNASPSLTASSQEDYELKTCLLEDTLHVVDMEA 372
VN SPS + S+ D E+K LL DTL ++++E+
Sbjct: 102 VNHSPSFSTDSRLDKEVKDGLLYDTLVLINLES 134
>gi|194239678 tubulin tyrosine ligase-like family, member 10 isoform
2 [Homo sapiens]
Length = 404
Score = 78.2 bits (191), Expect = 1e-14
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 31/172 (18%)
Query: 137 DFFPKTFEMPCEYH--LFVEEFRKNPGITWIMKPVARSQGKGIFLFRRLKDIVDWRKDTR 194
+FFP+T+ + ++ F F + WI KP A +QGKGIFL R +++ + TR
Sbjct: 210 EFFPETYRLDLKHEREAFFTLFDETQ--IWICKPTASNQGKGIFLLRNQEEVAALQAKTR 267
Query: 195 SSDDQKDDIPVENY---------VAQRYIENPYLIGGRKFDLRVYVLVMSVFAECLLWS- 244
S +D P+ + V QRYI+NP L+ GRKFD+R Y+L+ + +
Sbjct: 268 SMEDD----PIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIFFGH 323
Query: 245 GHRRQDV------------HLTNVAVQKTSPDYH-PKKGCKWTLQRFRQYLA 283
G+ R + HLTN +QK SP Y K+ W+++ +Y++
Sbjct: 324 GYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLKEHTVWSMEHLNRYIS 375
>gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Homo
sapiens]
Length = 538
Score = 50.8 bits (120), Expect = 2e-06
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 78 CDVSWLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCD 137
CD+ W +F H +++ F E+ RK + + ++ + E +
Sbjct: 253 CDIYWHGVSF-HDNDIFSGQVNKFPGMTEMVRKITLSRAVRTMQNLFPEEY--------N 303
Query: 138 FFPKTFEMPCEYHLFVEEFR--KNPGITW----IMKPVARSQGKGIFLFRRLKDIVDWRK 191
F+P+++ +P E+ LFV + + K+ +W I+KP QG GI+L + DI
Sbjct: 304 FYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDI----- 358
Query: 192 DTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYVLVMSV 236
+ V Q YI P LI KFD+R+YVL+ S+
Sbjct: 359 ------RLAGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSL 397
>gi|22550104 ubiquitin specific protease 32 [Homo sapiens]
Length = 1604
Score = 32.0 bits (71), Expect = 1.1
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 330 DQDLKPWLLEVNASPSLTASSQEDYELKTCLLEDTLHVVDMEARLTGREKRVGGFDLMW- 388
++D++ WL N+ LT ED++L+ ++D H+V +E R D+ W
Sbjct: 663 EEDMRLWLY--NSENYLTLLDDEDHKLEYLKIQDEQHLV-IEVR---------NKDMSWP 710
Query: 389 -------NDGPVSR-----EEGAPDLSGMGN-FVTNTHLGCVNDRKKQLRQLFCS 430
N + R E+GA LS +GN N+ + CV++ + L Q F S
Sbjct: 711 EEMSFIANSSKIDRHKVPTEKGATGLSNLGNTCFMNSSIQCVSN-TQPLTQYFIS 764
>gi|5174617 nucleotide-binding oligomerization domain containing 1
[Homo sapiens]
Length = 953
Score = 30.8 bits (68), Expect = 2.5
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 320 FELYGYDILIDQ--DLKPWLLEVNASPSLTASSQ 351
F LY L D DL+PWLLE+ SPSL S+
Sbjct: 85 FFLYLLQQLADAYVDLRPWLLEIGFSPSLLTQSK 118
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 30.0 bits (66), Expect = 4.3
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 330 DQDLKPWLLEVNASPSLTA-SSQEDYELKTCLLEDTLHVVDMEARLTGREKRVGGFDLMW 388
D+ +K LLE+ S L+A +++ED+E L E +HV +E+ L +EK + M
Sbjct: 306 DESIKK-LLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKE----NSML 360
Query: 389 NDGPVSREEGAPD 401
+ R E APD
Sbjct: 361 REEMHRRFENAPD 373
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 30.0 bits (66), Expect = 4.3
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 330 DQDLKPWLLEVNASPSLTA-SSQEDYELKTCLLEDTLHVVDMEARLTGREKRVGGFDLMW 388
D+ +K LLE+ S L+A +++ED+E L E +HV +E+ L +EK + M
Sbjct: 306 DESIKK-LLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKE----NSML 360
Query: 389 NDGPVSREEGAPD 401
+ R E APD
Sbjct: 361 REEMHRRFENAPD 373
>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 29.6 bits (65), Expect = 5.7
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 177 IFLFRR-----LKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYV 231
IFLF R + ++ D +++ + DQ+ +++ + +EN + I +K DL +
Sbjct: 600 IFLFTRDFSRYISNMEDVKQELQQLRDQESKKNKDHFETLKNLENGFYINDQKADL--LL 657
Query: 232 LVMSVFAECLLWSGHRRQDVHLTNVAVQKTSPDYHPKKGCK-------WTLQRFRQYLAS 284
L E +L+ + + A+ TS D + + W + +
Sbjct: 658 LENKKLKEYILYLKNNIEKYREGQEALMHTSSDLSRQLIAQEAQYKDLWAEFQTTVKILV 717
Query: 285 KHGPEAVETLFRDIDNIFVKSLQSVQKV-IISDKHCFELYGYDILIDQDLKPWLLEVNAS 343
+G E ++ DI+N+ K + +K+ +S L G +L++Q+ LL
Sbjct: 718 DNGEETLQ----DINNLTDKLRERDEKMQHVSTWLRGSLEGLRLLVEQESPMDLLSKQQL 773
Query: 344 PSLTASSQEDYELKTCLLED 363
+L +S+E+ KTC L D
Sbjct: 774 RALLVTSKEE---KTCQLSD 790
>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 29.6 bits (65), Expect = 5.7
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 177 IFLFRR-----LKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYV 231
IFLF R + ++ D +++ + DQ+ +++ + +EN + I +K DL +
Sbjct: 600 IFLFTRDFSRYISNMEDVKQELQQLRDQESKKNKDHFETLKNLENGFYINDQKADL--LL 657
Query: 232 LVMSVFAECLLWSGHRRQDVHLTNVAVQKTSPDYHPKKGCK-------WTLQRFRQYLAS 284
L E +L+ + + A+ TS D + + W + +
Sbjct: 658 LENKKLKEYILYLKNNIEKYREGQEALMHTSSDLSRQLIAQEAQYKDLWAEFQTTVKILV 717
Query: 285 KHGPEAVETLFRDIDNIFVKSLQSVQKV-IISDKHCFELYGYDILIDQDLKPWLLEVNAS 343
+G E ++ DI+N+ K + +K+ +S L G +L++Q+ LL
Sbjct: 718 DNGEETLQ----DINNLTDKLRERDEKMQHVSTWLRGSLEGLRLLVEQESPMDLLSKQQL 773
Query: 344 PSLTASSQEDYELKTCLLED 363
+L +S+E+ KTC L D
Sbjct: 774 RALLVTSKEE---KTCQLSD 790
>gi|21536346 T-cell leukemia/lymphoma 6 isoform TCL6d1 [Homo
sapiens]
Length = 163
Score = 29.6 bits (65), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 267 PKKGCKWTLQRFRQYLASKHGPEAVETLFRD 297
PK+G +W R + YL S+ G A + L RD
Sbjct: 58 PKRGQQWLEARHKSYLHSRRGDHAKDKLQRD 88
>gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens]
Length = 640
Score = 29.6 bits (65), Expect = 5.7
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 9 LGPGTTAIRCPKKLQNQNYKGHGLSKGKEREQRASIRFKTTLMNTL 54
L PG+ ++CPK ++ + H SK K ++ + + K + T+
Sbjct: 438 LPPGSVLLKCPKPMEENHSMSHKKSKKKSKKHKEKDQIKKHDIETI 483
>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 29.3 bits (64), Expect = 7.4
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 177 IFLFRR-----LKDIVDWRKDTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYV 231
IFLF R + ++ D +++ + DQ+ +++ + +EN + I +K DL +
Sbjct: 600 IFLFTRDFSRYISNMEDVKQELQQLRDQESKKNKDHFETLKNLENGFYINDQKADL--LL 657
Query: 232 LVMSVFAECLLWSGHRRQDVHLTNVAVQKTSPDYHPKKGCK-------WTLQRFRQYLAS 284
L E +L+ + + A+ TS D + + W + +
Sbjct: 658 LENKKLKEYILYLKNNIEKYREGQEALMHTSNDLSRQLIAQEAQYKDLWAEFQTTVKILV 717
Query: 285 KHGPEAVETLFRDIDNIFVKSLQSVQKV-IISDKHCFELYGYDILIDQDLKPWLLEVNAS 343
+G E ++ DI+N+ K + +K+ +S L G +L++Q+ LL
Sbjct: 718 DNGEETLQ----DINNLTDKLRERDEKMQHVSTWLRGSLEGLRLLVEQESPMDLLSKQQL 773
Query: 344 PSLTASSQEDYELKTCLLED 363
+L +S+E+ KTC L D
Sbjct: 774 RALLVTSKEE---KTCQLSD 790
>gi|110347451 platelet/endothelial cell adhesion molecule [Homo
sapiens]
Length = 738
Score = 28.9 bits (63), Expect = 9.7
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 234 MSVFAECLLWSGHRRQDVHLT-NVAVQKTSPDYHPKKGCKWTLQRFRQYLASKHGPEAVE 292
+ V LL S Q+ T N K+ PD+ + G TLQ F + H +
Sbjct: 13 LGVLLTLLLCSSLEGQENSFTINSVDMKSLPDWTVQNGKNLTLQCFADVSTTSHVKPQHQ 72
Query: 293 TLFRDIDNIF--VKSLQSVQKVIISDKHCFE--LYGYDILIDQDLK-----PWLLEVNAS 343
LF D +F + S++S + I + ++ Y ++++ K L+E S
Sbjct: 73 MLFYKDDVLFYNISSMKSTESYFIPEVRIYDSGTYKCTVIVNNKEKTTAEYQLLVEGVPS 132
Query: 344 PSLTASSQE 352
P +T +E
Sbjct: 133 PRVTLDKKE 141
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 28.9 bits (63), Expect = 9.7
Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 4/142 (2%)
Query: 298 IDNIFVKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSL--TASSQEDYE 355
+++ + ++ VQK + + +C L G + +DL ++ + SL S + E
Sbjct: 1719 MESSILNKMEHVQKCLTGESNCHALSGSTAELREDLDQAKTQIGMTESLLKALSPSDSLE 1778
Query: 356 LKTCLLEDTLHVVDMEARLTGREKRVGGFDLMWNDGPVSREEGAPDLSGMGNFVTNTHLG 415
+ T L E ++ + + E ++G ++ + E DL V H
Sbjct: 1779 IFTKLEEIQQQILQQKHSMILLENQIGCLTPELSE-LKKQYESVSDLFNTKKSVLQDHFS 1837
Query: 416 -CVNDRKKQLRQLFCSLQVQKK 436
+ND+ K F +++V K
Sbjct: 1838 KLLNDQCKNFNDWFSNIKVNLK 1859
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 28.9 bits (63), Expect = 9.7
Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 4/142 (2%)
Query: 298 IDNIFVKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSL--TASSQEDYE 355
+++ + ++ VQK + + +C L G + +DL ++ + SL S + E
Sbjct: 1719 MESSILNKMEHVQKCLTGESNCHALSGSTAELREDLDQAKTQIGMTESLLKALSPSDSLE 1778
Query: 356 LKTCLLEDTLHVVDMEARLTGREKRVGGFDLMWNDGPVSREEGAPDLSGMGNFVTNTHLG 415
+ T L E ++ + + E ++G ++ + E DL V H
Sbjct: 1779 IFTKLEEIQQQILQQKHSMILLENQIGCLTPELSE-LKKQYESVSDLFNTKKSVLQDHFS 1837
Query: 416 -CVNDRKKQLRQLFCSLQVQKK 436
+ND+ K F +++V K
Sbjct: 1838 KLLNDQCKNFNDWFSNIKVNLK 1859
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,128,480
Number of Sequences: 37866
Number of extensions: 744102
Number of successful extensions: 1679
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1613
Number of HSP's gapped (non-prelim): 32
length of query: 439
length of database: 18,247,518
effective HSP length: 105
effective length of query: 334
effective length of database: 14,271,588
effective search space: 4766710392
effective search space used: 4766710392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.