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Name: TCL6 Sequence: fasta or formatted (163aa) NCBI GI: 21536346
Description:

T-cell leukemia/lymphoma 6 isoform TCL6d1

Referenced in:

T cells

Other entries for this name:
alt prot [141aa] T-cell leukemia/lymphoma 6 isoform TCL6a2
alt prot [141aa] T-cell leukemia/lymphoma 6 isoform TCL6a1
alt prot [141aa] T-cell leukemia/lymphoma 6 isoform TCL6a3
alt prot [105aa] T-cell leukemia/lymphoma 6 isoform TCL6b1
alt prot [119aa] T-cell leukemia/lymphoma 6 isoform TCL6c1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         13           2
 C cysteine            4.3          7           1
 D aspartate           2.5          4           1
 E glutamate           4.9          8           1
 F phenylalanine       3.1          5           2
 G glycine             4.3          7           2
 H histidine           8.0         13           1
 I isoleucine          1.2          2           1
 K lysine              5.5          9           1
 L leucine             8.0         13           2
 M methionine          1.2          2           1
 N asparagine          1.2          2           1
 P proline             5.5          9           1
 Q glutamine           6.1         10           2
 R arginine            9.2         15           2
 S serine             14.1         23           2
 T threonine           4.9          8           1
 V valine              3.7          6           1
 W tryptophan          3.1          5           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   T-cell leukemia/lymphoma 6 isoform TCL6d1 
TCL6                  0.605   T-cell leukemia/lymphoma 6 isoform TCL6c1 
TCL6                  0.605   T-cell leukemia/lymphoma 6 isoform TCL6b1 
EDA2R                 0.019   X-linked ectodysplasin receptor 
NKTR                  0.019   natural killer-tumor recognition sequence 
TTLL9                 0.015   tubulin tyrosine ligase-like family, member 9 
SFRS4                 0.009   splicing factor, arginine/serine-rich 4 
LOC100292909          0.009   PREDICTED: hypothetical protein 
LOC100170229          0.006   hypothetical protein LOC100170229 
SSPO                  0.006   SCO-spondin 
DOPEY1                0.006   dopey family member 1 
TTLL8                 0.006   tubulin tyrosine ligase-like family, member 8 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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