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Search of human proteins with 56549696
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56549696 E1A binding protein p400 [Homo sapiens]
(3122 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56549696 E1A binding protein p400 [Homo sapiens] 6187 0.0
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 545 e-154
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 228 5e-59
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 228 5e-59
gi|38708321 INO80 complex homolog 1 [Homo sapiens] 221 9e-57
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 213 3e-54
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 213 3e-54
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 213 3e-54
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 213 3e-54
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 213 3e-54
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 213 3e-54
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 213 3e-54
gi|164419749 SWI/SNF-related matrix-associated actin-dependent r... 192 6e-48
gi|21071044 SWI/SNF-related matrix-associated actin-dependent re... 192 6e-48
gi|21071058 SWI/SNF-related matrix-associated actin-dependent re... 190 2e-47
gi|190358534 SWI/SNF-related, matrix-associated actin-dependent ... 171 1e-41
gi|190358536 SWI/SNF-related, matrix-associated actin-dependent ... 169 5e-41
gi|190358532 SWI/SNF-related, matrix-associated actin-dependent ... 169 5e-41
gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 165 7e-40
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa... 152 5e-36
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 146 3e-34
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 146 3e-34
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 146 3e-34
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 144 2e-33
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 144 2e-33
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 142 7e-33
gi|148612870 chromodomain helicase DNA binding protein 1-like [H... 141 1e-32
gi|114326455 chromodomain helicase DNA binding protein 8 [Homo s... 140 2e-32
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 140 2e-32
gi|4557565 excision repair cross-complementing rodent repair def... 136 3e-31
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 6187 bits (16050), Expect = 0.0
Identities = 3122/3122 (100%), Positives = 3122/3122 (100%)
Query: 1 MHHGTGPQNVQHQLQRSRACPGSEGEEQPAHPNPPPSPAAPFAPSASPSAPQSPSYQIQQ 60
MHHGTGPQNVQHQLQRSRACPGSEGEEQPAHPNPPPSPAAPFAPSASPSAPQSPSYQIQQ
Sbjct: 1 MHHGTGPQNVQHQLQRSRACPGSEGEEQPAHPNPPPSPAAPFAPSASPSAPQSPSYQIQQ 60
Query: 61 LMNRSPATGQNVNITLQSVGPVVGGNQQITLAPLPLPSPTSPGFQFSAQPRRFEHGSPSY 120
LMNRSPATGQNVNITLQSVGPVVGGNQQITLAPLPLPSPTSPGFQFSAQPRRFEHGSPSY
Sbjct: 61 LMNRSPATGQNVNITLQSVGPVVGGNQQITLAPLPLPSPTSPGFQFSAQPRRFEHGSPSY 120
Query: 121 IQVTSPLSQQVQTQSPTQPSPGPGQALQNVRAGAPGPGLGLCSSSPTGGFVDASVLVRQI 180
IQVTSPLSQQVQTQSPTQPSPGPGQALQNVRAGAPGPGLGLCSSSPTGGFVDASVLVRQI
Sbjct: 121 IQVTSPLSQQVQTQSPTQPSPGPGQALQNVRAGAPGPGLGLCSSSPTGGFVDASVLVRQI 180
Query: 181 SLSPSSGGHFVFQDGSGLTQIAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQ 240
SLSPSSGGHFVFQDGSGLTQIAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQ
Sbjct: 181 SLSPSSGGHFVFQDGSGLTQIAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQ 240
Query: 241 SPAAAGGAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGV 300
SPAAAGGAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGV
Sbjct: 241 SPAAAGGAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGV 300
Query: 301 LLPGAGGAAGFGMTSPPPPTSPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE 360
LLPGAGGAAGFGMTSPPPPTSPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE
Sbjct: 301 LLPGAGGAAGFGMTSPPPPTSPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE 360
Query: 361 MAQMRKQCLDYHYQEMQALKEVFKEYLIELFFLQHFQGNMMDFLAFKKKHYAPLQAYLRQ 420
MAQMRKQCLDYHYQEMQALKEVFKEYLIELFFLQHFQGNMMDFLAFKKKHYAPLQAYLRQ
Sbjct: 361 MAQMRKQCLDYHYQEMQALKEVFKEYLIELFFLQHFQGNMMDFLAFKKKHYAPLQAYLRQ 420
Query: 421 NDLDIEEEEEEEEEEEEKSEVINDEQALAGSLVAGAGSTVETDLFKRQQAMPSTGMAEQS 480
NDLDIEEEEEEEEEEEEKSEVINDEQALAGSLVAGAGSTVETDLFKRQQAMPSTGMAEQS
Sbjct: 421 NDLDIEEEEEEEEEEEEKSEVINDEQALAGSLVAGAGSTVETDLFKRQQAMPSTGMAEQS 480
Query: 481 KRPRLEVGHQGVVFQHPGADAGVPLQQLMPTAQGGMPPTPQAAQLAGQRQSQQQYDPSTG 540
KRPRLEVGHQGVVFQHPGADAGVPLQQLMPTAQGGMPPTPQAAQLAGQRQSQQQYDPSTG
Sbjct: 481 KRPRLEVGHQGVVFQHPGADAGVPLQQLMPTAQGGMPPTPQAAQLAGQRQSQQQYDPSTG 540
Query: 541 PPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNV 600
PPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNV
Sbjct: 541 PPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNV 600
Query: 601 PIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRP 660
PIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRP
Sbjct: 601 PIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRP 660
Query: 661 LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPA 720
LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPA
Sbjct: 661 LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPA 720
Query: 721 QNATSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPRPKSHWDYLLE 780
QNATSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPRPKSHWDYLLE
Sbjct: 721 QNATSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPRPKSHWDYLLE 780
Query: 781 EMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQLREERGKKEEQSRLRRIAASTAREI 840
EMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQLREERGKKEEQSRLRRIAASTAREI
Sbjct: 781 EMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQLREERGKKEEQSRLRRIAASTAREI 840
Query: 841 ECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRK 900
ECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRK
Sbjct: 841 ECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRK 900
Query: 901 RKASISLTDDEVDDEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLMKLYEGAFLPS 960
RKASISLTDDEVDDEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLMKLYEGAFLPS
Sbjct: 901 RKASISLTDDEVDDEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLMKLYEGAFLPS 960
Query: 961 SQWPRPKPDGEDTSGEEDADDCPGDRESRKDLVLIDSLFIMDQFKAAERMNIGKPNAKDI 1020
SQWPRPKPDGEDTSGEEDADDCPGDRESRKDLVLIDSLFIMDQFKAAERMNIGKPNAKDI
Sbjct: 961 SQWPRPKPDGEDTSGEEDADDCPGDRESRKDLVLIDSLFIMDQFKAAERMNIGKPNAKDI 1020
Query: 1021 ADVTAVAEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADE 1080
ADVTAVAEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADE
Sbjct: 1021 ADVTAVAEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADE 1080
Query: 1081 AGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRE 1140
AGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRE
Sbjct: 1081 AGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRE 1140
Query: 1141 LKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFT 1200
LKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFT
Sbjct: 1141 LKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFT 1200
Query: 1201 LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVIRLH 1260
LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVIRLH
Sbjct: 1201 LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVIRLH 1260
Query: 1261 RVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVNV 1320
RVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVNV
Sbjct: 1261 RVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVNV 1320
Query: 1321 LSILVRLQRICNHPGLVEPRHPGSSYVAGPLEYPSASLILKALERDFWKEADLSMFDLIG 1380
LSILVRLQRICNHPGLVEPRHPGSSYVAGPLEYPSASLILKALERDFWKEADLSMFDLIG
Sbjct: 1321 LSILVRLQRICNHPGLVEPRHPGSSYVAGPLEYPSASLILKALERDFWKEADLSMFDLIG 1380
Query: 1381 LENKITRHEAELLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLFQPVQYGQKPEGRT 1440
LENKITRHEAELLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLFQPVQYGQKPEGRT
Sbjct: 1381 LENKITRHEAELLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLFQPVQYGQKPEGRT 1440
Query: 1441 VAFPSTHPPRTAAPTTASAAPQGPLRGRPPIATFSANPEAKAAAAPFQTSQASASAPRHQ 1500
VAFPSTHPPRTAAPTTASAAPQGPLRGRPPIATFSANPEAKAAAAPFQTSQASASAPRHQ
Sbjct: 1441 VAFPSTHPPRTAAPTTASAAPQGPLRGRPPIATFSANPEAKAAAAPFQTSQASASAPRHQ 1500
Query: 1501 PASASSTAASPAHPAKLRAQTTAQASTPGQPPPQPQAPSHAAGQSALPQRLVLPSQAQAR 1560
PASASSTAASPAHPAKLRAQTTAQASTPGQPPPQPQAPSHAAGQSALPQRLVLPSQAQAR
Sbjct: 1501 PASASSTAASPAHPAKLRAQTTAQASTPGQPPPQPQAPSHAAGQSALPQRLVLPSQAQAR 1560
Query: 1561 LPSGEVVKIAQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGSV 1620
LPSGEVVKIAQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGSV
Sbjct: 1561 LPSGEVVKIAQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGSV 1620
Query: 1621 LQIVSAPGQPYLRAPGPVVMQTVSQAGAVHGALGSKPPAGGPSPAPLTPQVGVPGRVAVN 1680
LQIVSAPGQPYLRAPGPVVMQTVSQAGAVHGALGSKPPAGGPSPAPLTPQVGVPGRVAVN
Sbjct: 1621 LQIVSAPGQPYLRAPGPVVMQTVSQAGAVHGALGSKPPAGGPSPAPLTPQVGVPGRVAVN 1680
Query: 1681 ALAVGEPGTASKPASPIGGPTQEEKTRLLKERLDQIYLVNERRCSQAPVYGRDLLRICAL 1740
ALAVGEPGTASKPASPIGGPTQEEKTRLLKERLDQIYLVNERRCSQAPVYGRDLLRICAL
Sbjct: 1681 ALAVGEPGTASKPASPIGGPTQEEKTRLLKERLDQIYLVNERRCSQAPVYGRDLLRICAL 1740
Query: 1741 PSHGRVQWRGSLDGRRGKEAGPAHSYTSSSESPSELMLTLCRCGESLQDVIDRVAFVIPP 1800
PSHGRVQWRGSLDGRRGKEAGPAHSYTSSSESPSELMLTLCRCGESLQDVIDRVAFVIPP
Sbjct: 1741 PSHGRVQWRGSLDGRRGKEAGPAHSYTSSSESPSELMLTLCRCGESLQDVIDRVAFVIPP 1800
Query: 1801 VVAAPPSLRVPRPPPLYSHRMRILRQGLREHAAPYFQQLRQTTAPRLLQFPELRLVQFDS 1860
VVAAPPSLRVPRPPPLYSHRMRILRQGLREHAAPYFQQLRQTTAPRLLQFPELRLVQFDS
Sbjct: 1801 VVAAPPSLRVPRPPPLYSHRMRILRQGLREHAAPYFQQLRQTTAPRLLQFPELRLVQFDS 1860
Query: 1861 GKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQELM 1920
GKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQELM
Sbjct: 1861 GKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQELM 1920
Query: 1921 RSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIH 1980
RSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIH
Sbjct: 1921 RSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIH 1980
Query: 1981 IYRLVSGNSIEEKLLKNGTKDLIREVAAQGNDYSMAFLTQRTIQELFEVYSPMDDAGFPV 2040
IYRLVSGNSIEEKLLKNGTKDLIREVAAQGNDYSMAFLTQRTIQELFEVYSPMDDAGFPV
Sbjct: 1981 IYRLVSGNSIEEKLLKNGTKDLIREVAAQGNDYSMAFLTQRTIQELFEVYSPMDDAGFPV 2040
Query: 2041 KAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEEDAQKSAQEGVLGPHTDALSSDS 2100
KAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEEDAQKSAQEGVLGPHTDALSSDS
Sbjct: 2041 KAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEEDAQKSAQEGVLGPHTDALSSDS 2100
Query: 2101 ENMPCDEEPSQLEELADFMEQLTPIEKYALNYLELFHTSIEQEKERNSEDAVMTAVRAWE 2160
ENMPCDEEPSQLEELADFMEQLTPIEKYALNYLELFHTSIEQEKERNSEDAVMTAVRAWE
Sbjct: 2101 ENMPCDEEPSQLEELADFMEQLTPIEKYALNYLELFHTSIEQEKERNSEDAVMTAVRAWE 2160
Query: 2161 FWNLKTLQEREARLRLEQEEAELLTYTREDAYSMEYVYEDVDGQTEVMPLWTPPTPPQDD 2220
FWNLKTLQEREARLRLEQEEAELLTYTREDAYSMEYVYEDVDGQTEVMPLWTPPTPPQDD
Sbjct: 2161 FWNLKTLQEREARLRLEQEEAELLTYTREDAYSMEYVYEDVDGQTEVMPLWTPPTPPQDD 2220
Query: 2221 SDIYLDSVMCLMYEATPIPEAKLPPVYVRKERKRHKTDPSAAGRKKKQRHGEAVVPPRSL 2280
SDIYLDSVMCLMYEATPIPEAKLPPVYVRKERKRHKTDPSAAGRKKKQRHGEAVVPPRSL
Sbjct: 2221 SDIYLDSVMCLMYEATPIPEAKLPPVYVRKERKRHKTDPSAAGRKKKQRHGEAVVPPRSL 2280
Query: 2281 FDRATPGLLKIRREGKEQKKNILLKQQVPFAKPLPTFAKPTAEPGQDNPEWLISEDWALL 2340
FDRATPGLLKIRREGKEQKKNILLKQQVPFAKPLPTFAKPTAEPGQDNPEWLISEDWALL
Sbjct: 2281 FDRATPGLLKIRREGKEQKKNILLKQQVPFAKPLPTFAKPTAEPGQDNPEWLISEDWALL 2340
Query: 2341 QAVKQLLELPLNLTIVSPAHTPNWDLVSDVVNSCSRIYRSSKQCRNRYENVIIPREEGKS 2400
QAVKQLLELPLNLTIVSPAHTPNWDLVSDVVNSCSRIYRSSKQCRNRYENVIIPREEGKS
Sbjct: 2341 QAVKQLLELPLNLTIVSPAHTPNWDLVSDVVNSCSRIYRSSKQCRNRYENVIIPREEGKS 2400
Query: 2401 KNNRPLRTSQIYAQDENATHTQLYTSHFDLMKMTAGKRSPPIKPLLGMNPFQKNPKHASV 2460
KNNRPLRTSQIYAQDENATHTQLYTSHFDLMKMTAGKRSPPIKPLLGMNPFQKNPKHASV
Sbjct: 2401 KNNRPLRTSQIYAQDENATHTQLYTSHFDLMKMTAGKRSPPIKPLLGMNPFQKNPKHASV 2460
Query: 2461 LAESGINYDKPLPPIQVASLRAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQP 2520
LAESGINYDKPLPPIQVASLRAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQP
Sbjct: 2461 LAESGINYDKPLPPIQVASLRAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQP 2520
Query: 2521 PPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTIK 2580
PPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTIK
Sbjct: 2521 PPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTIK 2580
Query: 2581 TSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPAQVVHT 2640
TSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPAQVVHT
Sbjct: 2581 TSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPAQVVHT 2640
Query: 2641 QPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNLTPVQTPARSLVPQVSQAT 2700
QPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNLTPVQTPARSLVPQVSQAT
Sbjct: 2641 QPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNLTPVQTPARSLVPQVSQAT 2700
Query: 2701 GVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQ 2760
GVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQ
Sbjct: 2701 GVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQ 2760
Query: 2761 GQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQ 2820
GQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQ
Sbjct: 2761 GQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQ 2820
Query: 2821 QSPQLTTVTAPRPGALLTGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPP 2880
QSPQLTTVTAPRPGALLTGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPP
Sbjct: 2821 QSPQLTTVTAPRPGALLTGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPP 2880
Query: 2881 VVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQ 2940
VVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQ
Sbjct: 2881 VVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQ 2940
Query: 2941 KAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQ 3000
KAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQ
Sbjct: 2941 KAIQPQAAQGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQ 3000
Query: 3001 VQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTATA 3060
VQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTATA
Sbjct: 3001 VQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTATA 3060
Query: 3061 QVVQQKLIQQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPKLQMRVPAVRLKTPTKPP 3120
QVVQQKLIQQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPKLQMRVPAVRLKTPTKPP
Sbjct: 3061 QVVQQKLIQQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPKLQMRVPAVRLKTPTKPP 3120
Query: 3121 CQ 3122
CQ
Sbjct: 3121 CQ 3122
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 545 bits (1403), Expect = e-154
Identities = 335/898 (37%), Positives = 470/898 (52%), Gaps = 165/898 (18%)
Query: 909 DDEVDDEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLMKLYEGAFLPSSQWPRPK- 967
++E +DEE+TI EE EG VDH ELS LA+E EL + +L++ Y GA+ P S +
Sbjct: 407 EEEAEDEEDTIAAEEQLEGEVDHAMELSELAREGELSMEELLQQYAGAYAPGSGSSEDED 466
Query: 968 ------------PDG---------------------------------EDTSGE------ 976
P+G E+TSG
Sbjct: 467 EDEVDANSSDCEPEGPVEAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEES 526
Query: 977 --EDADDCPG----DRESRKDLVLIDSLFIMDQFKAAERMNIGKPNA--------KDIAD 1022
E+++D D E D ++ L D+ ++ G P K+I D
Sbjct: 527 ESEESEDAQSQSQADEEEEDDDFGVEYLLARDEEQSEADAGSGPPTPGPTTLGPKKEITD 586
Query: 1023 VTAVAEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAG 1082
+ A AE++ PKG TT VK P LL G LR+YQ IGLDWL +Y K LNGILADE G
Sbjct: 587 IAAAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMG 646
Query: 1083 LGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELK 1142
LGKT+Q I+ AHLAC +GNWGPHL++V + +L WE+ELKRWCP KIL+Y G+ +E K
Sbjct: 647 LGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERK 706
Query: 1143 AKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQ 1202
KRQ W +PN+FHVCITSY + AF R W+ L++DE Q +K + W+++
Sbjct: 707 LKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFN 766
Query: 1203 SQQRLLLIDSPLHNTFLELWTMVHFLVPGI------SRPYLSSPLRAPSEESQDYYHKVV 1256
SQ+RLLL +PL N+ +ELW+++HFL+P + + + S+PL E SQ+Y +V
Sbjct: 767 SQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLV 826
Query: 1257 IRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGH 1316
RLH+V +PF+LRR K DVEKQ+ KKYEHV++CRLS RQ+ LY+D + Q T+E L +GH
Sbjct: 827 KRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGH 886
Query: 1317 FVNVLSILVRLQRICNHPGLVEPRHPGSSYVAGPLEYPSASLILKALERDFWKEADLSMF 1376
F++V++IL++L+++CNHP L +PR S ++ + + +ASL+L+A + + D+ F
Sbjct: 887 FMSVINILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRF 946
Query: 1377 DLIGLENKITRHEAE-LLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLFQPVQYGQK 1435
DLIGLE +++R+EA+ L + ++ R+++ E++T+ P RP K+K +R+ QPV K
Sbjct: 947 DLIGLEGRVSRYEADTFLPRHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPV---PK 1003
Query: 1436 PEGRTVAF--------------PSTHPPRTAAPT------------TASAAPQGP----- 1464
EGRTV P P +A PT SA+P GP
Sbjct: 1004 QEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPA 1063
Query: 1465 -----------------------------LRG--RPPIATFSANPEAKAAAAPFQTSQA- 1492
L G RPP T S P AP + S A
Sbjct: 1064 SRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKP---TPPAPVRLSPAP 1120
Query: 1493 -SASAPRHQPASASSTAASPAHPAKLRAQTTAQASTPGQPPPQPQAPSHAAGQSALPQRL 1551
S+ +P + P A + TTA A+T P P P PQRL
Sbjct: 1121 PPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTP-----------APQRL 1169
Query: 1552 VLPSQAQARLPSGEVVKIAQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAG 1611
+L QARLPSGEVV I QLAS+ A P+T Q QG+K TL+ +Q+RQL G
Sbjct: 1170 ILSPDMQARLPSGEVVSIGQLASLAQRPVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVG 1229
Query: 1612 QPLQLQGSVLQIVSAPGQPYLRAPGPVVMQTVSQAGAVHGALGSKPPAGGPSPAPLTP 1669
QP LQ +V+ +VSA GQ +L +SQ V + + P GP+P + P
Sbjct: 1230 QPRPLQRNVVHLVSAGGQHHL----------ISQPAHV-ALIQAVAPTPGPTPVSVLP 1276
Score = 332 bits (851), Expect = 4e-90
Identities = 259/817 (31%), Positives = 384/817 (47%), Gaps = 73/817 (8%)
Query: 1404 EEISTSAAPAARPAAAKLKASRLFQPVQYGQKPEGRTVAFPSTHPPRTAAPTTASAAPQG 1463
+ ++T AP A P A L S P P P AAP AS+
Sbjct: 1581 QALATPLAPMAAPQTAILAPS-----------PAPPLAPLPVLAPSPGAAPVLASSQTPV 1629
Query: 1464 PLRGRPP-----IATFSANPEAKAAAAPFQTSQ---ASASAPRHQPASASSTAASPAHPA 1515
P+ +A+ S P AP T A +P PAS + A +PA
Sbjct: 1630 PVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAP 1689
Query: 1516 KLRAQTTAQASTPGQPPPQPQAPSHAAGQSALPQRLVLPSQAQARLPSGEVVKIAQLASI 1575
L + +Q + G PQ P+ + + P+Q + P + L+
Sbjct: 1690 TLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLA 1749
Query: 1576 TGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGSVLQIVS-APGQPYLRA 1634
P A P P S + L + Q L L + + + A Q A
Sbjct: 1750 PAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALA 1809
Query: 1635 PGPVVMQTVSQAGAVHGALGSKP---------PAGGPSPAPLTPQVGVPGRVAVNALAVG 1685
P + V A G+ P P P LT + G P + A + G
Sbjct: 1810 PASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPST-ATSFG 1868
Query: 1686 EPGTASKPASPIGGP-----TQEEKTRLLKERLDQIYLVNERRCSQAPVYGRDLLRICAL 1740
P +P P P +E++ R ERL++I+ ++E + APVYG ++L C L
Sbjct: 1869 GPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGALAPVYGTEVLDFCTL 1928
Query: 1741 PSHGRVQWRGSLDGRRGKEAGPAH-SYTSSSESPSELMLTLCRCGESLQDVIDRVAFVIP 1799
P Q S G R GP+H ++ + +E+ +L + + L ++I+R FV+P
Sbjct: 1929 P-----QPVASPIGPRSP--GPSHPTFWTYTEAAHRAVLFPQQRLDQLSEIIERFIFVMP 1981
Query: 1800 PVVAAPPSLRVPRPPPLYSHRMRILRQGLREHAAPYFQQLRQTTAPRLLQFPELRLVQFD 1859
PV A PPSL PPP + R ++ L P + L + QFP+LRL+Q+D
Sbjct: 1982 PVEAPPPSLHACHPPPWLAPRQAAFQEQLASELWPRARPLHRIVCNMRTQFPDLRLIQYD 2041
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
GKL+ LA+LL++LK+EG RVLI +QM MLD+LE FL +H Y+R+D + EQRQ L
Sbjct: 2042 CGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2101
Query: 1920 MRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDI 1979
M FN D+RIFC ILST S G+NL ADTVVFYD+D NP MDA+AQ+ C RIG+ +D+
Sbjct: 2102 MERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Query: 1980 HIYRLVSGNSIEEKLLKNGT-KDLIREVAAQGNDYSMAFLTQRTIQELFEVYSPMDDAGF 2038
HIYRL+S ++EE +LK K ++ ++A +G +++ A+ Q+TI+ELF++ P+++
Sbjct: 2162 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDM--PLEE--- 2216
Query: 2039 PVKAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEEDAQKSAQEGVLGPHTDALSS 2098
V S ET+A K +AL E EED + + Q A +
Sbjct: 2217 ---PSSSSVPSAPEEEEETVASKQTHILEQALCRAED-EEDIRAATQAKAEQVAELAEFN 2272
Query: 2099 DSENMPC------------DEEPSQLE-ELADFMEQLTPIEKYALNYLELFHTSIEQEKE 2145
+++ P DEE S+ E E+A +EQLTPIE+YA+ +LE + +E+
Sbjct: 2273 ENDGFPAGEGEEAGRPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREEL 2332
Query: 2146 RNSEDAVMTAVRAWEFWNLKTLQEREARLRLEQEEAE 2182
+ +E+ V A + + Q +E RL QEE E
Sbjct: 2333 KQAEEQVEAARKDLD-------QAKEEVFRLPQEEEE 2362
Score = 212 bits (540), Expect = 4e-54
Identities = 133/356 (37%), Positives = 187/356 (52%), Gaps = 45/356 (12%)
Query: 662 PTSSTSSLAPVSGSGPGPSP---ARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQS 718
P S SS +P S G SP A+ S ++ P + A P+ + A K
Sbjct: 29 PVSPASSSSPASSGAGGISPQHIAQDSSLDGPPGPPDGATVPLEGFSLSQAADLANKGPK 88
Query: 719 PAQNATSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPRPKSHWDYL 778
+ S + EQ E ++ RIAELRK G WS +RLPK+ E PRPK HWDYL
Sbjct: 89 --------WEKSHAEIAEQAKHEAEIETRIAELRKEGFWSLKRLPKVPEPPRPKGHWDYL 140
Query: 779 LEEMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQLREERGKKEEQSRLRRIAASTAR 838
EEMQW++ DFAQERRWK A+K+VR V+RHHEE++ +EER ++EEQ++LRRIA++ A+
Sbjct: 141 CEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAK 200
Query: 839 EIECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSG 898
++ FWSN+E+VV+ K + LEEKRKKAL+L G + + + L SL+ ++
Sbjct: 201 DVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVG---QTEKYSDLLSQSLNQPLTS 257
Query: 899 RKRKASISL-------------------------TDDEVDDEEETIEEEEANEG--VVDH 931
K +S L +DE +D+EETIE EE EG
Sbjct: 258 SKAGSSPCLGSSSAASSPPPPASRLDDEDGDFQPQEDEEEDDEETIEVEEQQEGNDAEAQ 317
Query: 932 QTELSNLAKEAELPLLDLMKLYEGAFLPSSQWPRPKPDGEDT----SGEEDADDCP 983
+ E+ L +E ELPL +L++ L P P D+ EE A++ P
Sbjct: 318 RREIELLRREGELPLEELLRSLPPQLLEGPSSPSQTPSSHDSDTRDGPEEGAEEEP 373
Score = 64.7 bits (156), Expect = 1e-09
Identities = 140/667 (20%), Positives = 214/667 (32%), Gaps = 103/667 (15%)
Query: 2502 AVAQPPPPQPQP-PPPPQQPPPPLPQPQAA------GSQPPAGPPAVQPQPQPQPQTQPQ 2554
A A PPP+P+P + P+P+ + + P GP V+P P P+ QP
Sbjct: 978 ATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQPT 1037
Query: 2555 PVQAPAKAQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSIN 2614
P P + PA S V A + S P G V + +P +
Sbjct: 1038 PGPVP-QVLPA-----SLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLG 1091
Query: 2615 --KRLASPVAPGALTTPGGSAPAQVVHTQPP-PRAVGSPATATPDLVSMATTQGVRAVTS 2671
+ P P P AP ++ PP ++ P T P T A T+
Sbjct: 1092 VLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGY----TFPPAAATTT 1147
Query: 2672 VTASAVVTTNLTPVQTPARSLVPQ---VSQATGVQLP-GKTITPAHFQLLRQQQQQQQQQ 2727
T +A TT P TPA PQ +S +LP G+ ++ L Q+
Sbjct: 1148 STTTATATTTAVPAPTPA----PQRLILSPDMQARLPSGEVVSIGQLASLAQRPVANAGG 1203
Query: 2728 QQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKM--QK 2785
+ Q Q + T + QV Q+ P Q V HL+ Q
Sbjct: 1204 SKPLTFQIQGNK---------LTLTGAQVRQLAVGQPRPLQRNVV------HLVSAGGQH 1248
Query: 2786 QKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTGTTVANL 2845
+ P QA + P PT + +S P +P T ++ P + T V N
Sbjct: 1249 HLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAP--TGLSLPLAANQVPPTMVNNT 1306
Query: 2846 QVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGIS 2905
V ++ + Q P P +PP +PA + P +T
Sbjct: 1307 GVVKI-------VVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLT---------P 1350
Query: 2906 VAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAA--------------QGP 2951
+ P + + P ++ LLKL + A P AA GP
Sbjct: 1351 GRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGP 1410
Query: 2952 AAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLTT-PISQAQKLAGAQQVQTQIQVAKL 3010
A+ I V+ +L TT P + L + +
Sbjct: 1411 ASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGP 1470
Query: 3011 PQVVQQQTPVASIQQVAS-----ASQQASPQTVALTQATAAGQQVQM------------- 3052
+ P+A + A A ASP ALT A +
Sbjct: 1471 ALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPT 1530
Query: 3053 ---IPAVTATAQVVQQKLIQQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPKLQMRVP 3109
+P + +T ++ V ++ P APNPA AS +P+ + P
Sbjct: 1531 SSHVPGLNSTVAPACSPVL----VPASALASPFPSAPNPAPAQASLLAPASSASQALATP 1586
Query: 3110 AVRLKTP 3116
+ P
Sbjct: 1587 LAPMAAP 1593
Score = 52.8 bits (125), Expect = 5e-06
Identities = 137/627 (21%), Positives = 207/627 (33%), Gaps = 70/627 (11%)
Query: 2502 AVAQPPPPQPQ---PPPPPQQPPPP--LPQPQAAGSQPPA-----GPPAVQPQPQPQPQT 2551
AVA P P P P P P P L P AA PP G + + P+
Sbjct: 1262 AVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGL 1321
Query: 2552 QPQPVQAPAKAQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATF- 2610
P P APA P+ G AVL + ++T +PT + A +P T
Sbjct: 1322 TPVPPLAPAPRPPS---SGLPAVL--NPRPTLTPGRLPTPTLG-----TARAPMPTPTLV 1371
Query: 2611 QSINKRLASPVAPGALTTPGG-----SAPAQVVHTQPPPRAVGSPATATPDLVSMATTQG 2665
+ + K + SP + + PG S+P V + P P + P + L S ++
Sbjct: 1372 RPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTV 1431
Query: 2666 VRAVTSVTASAVVTTNLTPVQTPARSLV--PQVSQATGVQLPGKTITPAHFQLLRQQQQQ 2723
++S +V TT P P + P A+G L ++TP ++
Sbjct: 1432 SVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALL-TSVTPPLAPVVPAAPGP 1490
Query: 2724 QQQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQS--PAQIKAVGKLTPEHLI 2781
+++ P + S P V L+
Sbjct: 1491 PSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLV 1550
Query: 2782 KMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTGTT 2841
P P P AQ++ P + + P + T + AP P L
Sbjct: 1551 PASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPL---- 1606
Query: 2842 VANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNV 2901
A L + S A +Q P P + P A+ V +P P +
Sbjct: 1607 ------APLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSST 1660
Query: 2902 AGI---SVAIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQ-K 2957
+ V P A+ QT+ P L + Q ++ QGP Q
Sbjct: 1661 QTMLPAPVPSPLPSPASTQTLALAPALAP---TLGGSSPSQTLSLGTGNPQGPFPTQTLS 1717
Query: 2958 ITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQ 3017
+T P Q ++ A P L +Q LA A + V P
Sbjct: 1718 LTPASSLVPTPAQTLSLAPGPPLGP-------TQTLSLAPAPPLAPASPVGPAPAHTLTL 1770
Query: 3018 TPVASIQQVASASQQASPQTVALTQA------TAAGQQVQMIPAVTATAQVVQQKLIQQQ 3071
P +S AS AS QT+ L+ A AA Q + + PA T + L+
Sbjct: 1771 APASS---SASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLV--- 1824
Query: 3072 VVTTASAPLQTPGAPNPAQVPASSDSP 3098
V + +APL +++P S D P
Sbjct: 1825 VSASGAAPLPVTMV---SRLPVSKDEP 1848
Score = 51.6 bits (122), Expect = 1e-05
Identities = 55/184 (29%), Positives = 68/184 (36%), Gaps = 24/184 (13%)
Query: 533 QQYDPSTGPPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIP 592
Q P+ GP TP+ LP P LS L Q P + T +
Sbjct: 1261 QAVAPTPGP---------TPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKI 1311
Query: 593 VKTQQPNVPI-PAPPSSQLPIPPSQPAQLALH---VPTPGKVQVQASQLSSLPQMVASTR 648
V Q P + P PP + P PPS L+ TPG+ LP T
Sbjct: 1312 VVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGR----------LPTPTLGTA 1361
Query: 649 LPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPAR-SSPVNRPSSATNKALSPVTSRTPG 707
P P RPL S VS S PG +P SSP++ PSS A SP+
Sbjct: 1362 RAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSS 1421
Query: 708 VVAS 711
+AS
Sbjct: 1422 PLAS 1425
Score = 51.6 bits (122), Expect = 1e-05
Identities = 96/386 (24%), Positives = 143/386 (37%), Gaps = 69/386 (17%)
Query: 29 PAHPNPPPSPAAPFAPS-------ASPSAPQ-SPSYQIQQLMNRSPATGQNVNITLQSVG 80
P+ PNP P+ A+ AP+ A+P AP +P I P V
Sbjct: 1560 PSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAA 1619
Query: 81 PVVGGNQQITLAPLPLPSPTS-PGFQF-SAQPRRFEHGSPSYIQVTSPLSQQVQTQSPTQ 138
PV+ +Q P+P+ +P+S PG SA P P+ V +P S Q +P
Sbjct: 1620 PVLASSQ----TPVPVMAPSSTPGTSLASASP------VPAPTPVLAPSSTQTMLPAPV- 1668
Query: 139 PSPGPGQALQNVRAGAP--GPGLGLCSSSPT----GGFVDASVLVRQISLSPSSGGHFVF 192
PSP P A A AP P LG S S T G + +SL+P+S
Sbjct: 1669 PSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPAS------ 1722
Query: 193 QDGSGLTQIAQGAQVQLQHPGTP------ITVRERRPSQPHTQSGGTIHHLGPQSPAAAG 246
+ + AQ PG P +++ P P + G H +PA++
Sbjct: 1723 ------SLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSS 1776
Query: 247 GAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGVLLPGAG 306
+ L +P+ + T L P + G Q L P L+ A
Sbjct: 1777 AS----LLAPASVQTLTLSPAPVPTL-GPAAAQTLALAPASTQSPAS---QASSLVVSAS 1828
Query: 307 GAAGFGMTS----PPPPTSPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASP--- 359
GAA +T P P + G S P T+ G + P++ PP SP
Sbjct: 1829 GAAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSFGGPR--PRRQPPPPPRSPFYL 1886
Query: 360 -EMAQMRKQCLDYHYQEMQALKEVFK 384
+ + RK+ Q + L+ +F+
Sbjct: 1887 DSLEEKRKR------QRSERLERIFQ 1906
Score = 51.6 bits (122), Expect = 1e-05
Identities = 111/547 (20%), Positives = 183/547 (33%), Gaps = 82/547 (14%)
Query: 2500 QPAVAQPPPPQPQPPPPPQQPPPPLPQP--------QAAGSQPPAG--PPAVQPQPQPQP 2549
+P A P P P P P P+ P S PP PP P P P
Sbjct: 2444 RPTPASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPP 2503
Query: 2550 QTQPQPVQAPAKAQPAITTGGSAAVLA-GTIKTSVTGTSMPTG-AVSGNVIVNTIAGVPA 2607
P P P AQ + T S +L ++ S + T++P G + +A +
Sbjct: 2504 ACTPPPAHTPPPAQTCLVTPSSPLLLGPPSVPISASVTNLPLGLRPEAELCAQALASPES 2563
Query: 2608 ATFQSINKRLASPVAPGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVR 2667
S+ +S + +L P P V P S + P L A +
Sbjct: 2564 LELASV---ASSETSSLSLVPPKDLLPV-AVEILPVSEKNLSLTPSAPSLTLEAGSIPNG 2619
Query: 2668 AVTSVTASAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQ 2727
SA TT V L VS++ G++LP + Q+ +
Sbjct: 2620 QEQEAPDSAEGTT--LTVLPEGEELPLCVSESNGLELPPSAASD------EPLQEPLEAD 2671
Query: 2728 QQQQQQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQK 2787
+ ++ + + ++ Q T++V P A S +PE
Sbjct: 2672 RTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSATS----------SPE--------- 2712
Query: 2788 LQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTGTTVANLQV 2847
P PP + SA + Q + QPP + V PG L+T L
Sbjct: 2713 -GPSPARPPRRRTSADVEIRGQGTGRPGQPPGPK------VLRKLPGRLVTVVEEKELVR 2765
Query: 2848 ARLTRVPTSQLQAQGQMQTQAP--QPAQVALAKP---PVVSVPAAVVSSPGVTTLPMN-- 2900
R + + G +T A P+ +++ P P + P S + T P
Sbjct: 2766 RRRQQRGAASTLVPGVSETSASPGSPSVRSMSGPESSPPIGGPCEAAPSSSLPTPPQQPF 2825
Query: 2901 VAGISVAI-----GQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQ 2955
+A + + G P+ G LL + AV++++ P+ + PA
Sbjct: 2826 IARRHIELGVTGGGSPENGDG-----------ALLAITPPAVKRRRGRPPKKNRSPADAG 2874
Query: 2956 QKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQ 3015
+ + +T + A P +T + P+ + Q + G Q + PQ V
Sbjct: 2875 RGVDEAPSSTLKGKTNGADPV-PGPETLIVADPVLEPQLIPGPQPLG--------PQPVH 2925
Query: 3016 QQTPVAS 3022
+ P+ S
Sbjct: 2926 RPNPLLS 2932
Score = 49.7 bits (117), Expect = 5e-05
Identities = 66/224 (29%), Positives = 88/224 (39%), Gaps = 48/224 (21%)
Query: 537 PSTGPPVQNAASLHTPLPQL-PGRLPP-------AGVPTAAL-SSALQFAQQPQV-VEAQ 586
P+ PP ++ P P L PGRLP A +PT L L+ P V A
Sbjct: 1329 PAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSAS 1388
Query: 587 TQLQIPVKTQQP-NVP--IPAPPSSQLPIPPSQPA------------------QLALHVP 625
P+ P +VP +P P SS +PIP S P + +P
Sbjct: 1389 APGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLP 1448
Query: 626 TPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPARSS 685
P AS ++P S L V + P L TS T LAPV + PGP S
Sbjct: 1449 AP------ASAPLTIP---ISAPLTVSASGPA---LLTSVTPPLAPVVPAAPGPPSLAPS 1496
Query: 686 PVNRPSSATNKALSPV----TSRTPG-VVASAPTKPQSPAQNAT 724
+ +SA L+ +S+TPG + APT P N+T
Sbjct: 1497 GASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNST 1540
Score = 49.3 bits (116), Expect = 6e-05
Identities = 74/296 (25%), Positives = 101/296 (34%), Gaps = 58/296 (19%)
Query: 503 VPLQQLMPTAQGGMPPTP-QAAQLAGQRQSQQQYDPSTGPPVQNAASLHTPLPQLPGRLP 561
VP L P P QA+ LA + Q P ++ P P P
Sbjct: 1550 VPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPL 1609
Query: 562 PAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIP----APPSSQLPIPPSQP 617
P P+ + L +Q P V A + VP P AP S+Q +P P
Sbjct: 1610 PVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVP 1669
Query: 618 AQLALHVPTPGKVQVQASQLSSLPQMVAS---------TRLPVDPAP------------- 655
+ L P+P Q A + P + S T P P P
Sbjct: 1670 SPL----PSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLV 1725
Query: 656 PCPR---------PLPTSSTSSLAPVSGSGP----GPSPAR---------SSPVNRPSSA 693
P P PL + T SLAP P GP+PA S+ + P+S
Sbjct: 1726 PTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASV 1785
Query: 694 TNKALSPVTSRTPG-----VVASAPTKPQSPAQNATSSQDSSQDTLTEQITLENQV 744
LSP T G +A AP QSPA A+S S+ +T+ +++
Sbjct: 1786 QTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTMVSRL 1841
Score = 49.3 bits (116), Expect = 6e-05
Identities = 80/279 (28%), Positives = 100/279 (35%), Gaps = 37/279 (13%)
Query: 2458 ASVLAESGINYDKPLPPIQVASLRAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPPPP 2517
AS LA + P P Q + L A + A A P P P P P
Sbjct: 1552 ASALASPFPSAPNPAPA-QASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLP 1610
Query: 2518 QQPPPPLPQPQAAGSQPPAGPPAVQPQPQP-------QPQTQPQPVQAPAKAQ------- 2563
P P P A SQ P P + P P P P PV AP+ Q
Sbjct: 1611 VLAPSPGAAPVLASSQTPV--PVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPV 1668
Query: 2564 ------PAIT-TGGSAAVLAGTIKTSVTG--TSMPTGAVSGNVIVNTIAGVPAATFQSIN 2614
PA T T A LA T+ S S+ TG G T++ PA++
Sbjct: 1669 PSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTP 1728
Query: 2615 KRLASPVAPGALTTPGGSAPAQVVHTQP-PPRAVGSPATATPDLVSMATTQGVRAVTSVT 2673
+ S +APG P G P Q + P PP A SP P T + S+
Sbjct: 1729 AQTLS-LAPG---PPLG--PTQTLSLAPAPPLAPASPVGPAP--AHTLTLAPASSSASLL 1780
Query: 2674 ASAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPA 2712
A A V T LT P +L P +Q + P T +PA
Sbjct: 1781 APASVQT-LTLSPAPVPTLGPAAAQTLAL-APASTQSPA 1817
Score = 48.5 bits (114), Expect = 1e-04
Identities = 83/313 (26%), Positives = 108/313 (34%), Gaps = 61/313 (19%)
Query: 1444 PSTHPPRTAAPT--TASAAPQGPLRGRPPIA-TFSANPEAKAAAAPFQTSQASASAPRHQ 1500
P+ P R PT TA A P RP + S +PE A+A + + S+P H
Sbjct: 1346 PTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPG--AAPLTISSPLHV 1403
Query: 1501 PASASSTAASP---------AHPAKLRAQTTAQASTPGQPPPQPQAPSHAAGQSALPQRL 1551
P+S A+SP A P +S P P AP+ A + L
Sbjct: 1404 PSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPL 1463
Query: 1552 VLPSQAQARLPSGEVVKIAQLASITGPQSRV---AQPETPVTLQFQGSKFTLSHSQLRQL 1608
+ + A L S + + GP S A P + +LS SQ
Sbjct: 1464 TVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQ---- 1519
Query: 1609 TAGQPLQLQ-----------------GSVLQIVSAPGQPYLRAPGPVVMQ--------TV 1643
T G PL L VL SA P+ AP P Q +
Sbjct: 1520 TPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSA 1579
Query: 1644 SQAGAVHGALGSKPPAG--GPSPAP-------LTPQVGVPGRVAVNALAV------GEPG 1688
SQA A A + P PSPAP L P G +A + V PG
Sbjct: 1580 SQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPG 1639
Query: 1689 TASKPASPIGGPT 1701
T+ ASP+ PT
Sbjct: 1640 TSLASASPVPAPT 1652
Score = 45.8 bits (107), Expect = 7e-04
Identities = 66/240 (27%), Positives = 81/240 (33%), Gaps = 43/240 (17%)
Query: 501 AGVPLQQLMPTAQGGMPPTPQAAQLAGQRQSQQQYDPSTGPPVQNAASLHTPLPQLPGRL 560
A VP P + + P A G Q TG P P P L
Sbjct: 1666 APVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNP-------QGPFPTQTLSL 1718
Query: 561 PPAG--VPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSSQLPIPPSQPA 618
PA VPT A L A P + QT P P P+ P+ L + P+ +
Sbjct: 1719 TPASSLVPTPA--QTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSS 1776
Query: 619 QLALH-------------VPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPC------PR 659
L VPT G Q L+ AST+ P A
Sbjct: 1777 ASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAP-----ASTQSPASQASSLVVSASGAA 1831
Query: 660 PLPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSP 719
PLP + S L PVS P RS P + PS+AT+ P R P P P+SP
Sbjct: 1832 PLPVTMVSRL-PVSKDEPDTLTLRSGPPSPPSTATSFG-GPRPRRQP------PPPPRSP 1883
Score = 44.3 bits (103), Expect = 0.002
Identities = 66/236 (27%), Positives = 92/236 (38%), Gaps = 45/236 (19%)
Query: 503 VPLQQLMPTAQGGMPPTPQAAQLAGQRQSQQQYDPSTGPPVQNAAS--LHTPLPQLPG-- 558
VPL +P + P P +A L + S GP + + + L +P PG
Sbjct: 1433 VPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSAS-GPALLTSVTPPLAPVVPAAPGPP 1491
Query: 559 RLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIP-APPSSQLPIPPSQP 617
L P+G +A + L A P + +QT P P+ AP SS +P S
Sbjct: 1492 SLAPSGASPSASALTLGLATAPSLSSSQT----------PGHPLLLAPTSSHVPGLNSTV 1541
Query: 618 AQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGP 677
A P V V AS L+S P P P P P + S LAP S +
Sbjct: 1542 A------PACSPVLVPASALAS-------------PFPSAPNPAPAQA-SLLAPASSASQ 1581
Query: 678 G------PSPARSSPVNRPSSATNKALSPVTSRTPG---VVASAPTKPQSPAQNAT 724
P A + + PS A A PV + +PG V+AS+ T A ++T
Sbjct: 1582 ALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSST 1637
Score = 41.2 bits (95), Expect = 0.016
Identities = 80/340 (23%), Positives = 117/340 (34%), Gaps = 59/340 (17%)
Query: 28 QPAH--------PNPPPSPAAPFAPSASPSAPQSPS-YQIQQLMNRSPATGQNVNITLQS 78
QPAH P P P+P + PS++PS +P+ + N+ P T N ++
Sbjct: 1253 QPAHVALIQAVAPTPGPTPVS-VLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKI 1311
Query: 79 VGPVVGGNQQITLAPL-PLPSPTSPGFQFSAQPR----------------RFEHGSPSYI 121
V + + PL P P P S G PR R +P+ +
Sbjct: 1312 VVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLV 1371
Query: 122 QVTSPLSQQVQTQSPTQPSPGPGQA------LQNVRAGAPGPG---LGLCSSSPTGGFVD 172
+ PL + V + SP + PG A +V + PGP + + +SSP V
Sbjct: 1372 R---PLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVS 1428
Query: 173 ASVLVRQISLSPSSGGHFVFQDGSGLTQIAQGAQVQLQHP-GTPITVRERRPSQPHTQSG 231
++V V S P S T + A L P P+TV P+
Sbjct: 1429 STVSVPLSSSLPISVP----------TTLPAPASAPLTIPISAPLTVSASGPA----LLT 1474
Query: 232 GTIHHLGPQSPAAAGGAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRP 291
L P PAA G L P + + L + + +L P
Sbjct: 1475 SVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHV 1534
Query: 292 LGFERTPG-----VLLPGAGGAAGFGMTSPPPPTSPSRTA 326
G T VL+P + A+ F P P S A
Sbjct: 1535 PGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLA 1574
Score = 40.4 bits (93), Expect = 0.028
Identities = 83/375 (22%), Positives = 118/375 (31%), Gaps = 75/375 (20%)
Query: 15 QRSRACPGSEGEEQPAHPNPP----------PSPAAPFAP--------SASPSAPQSPSY 56
Q S P S + A P P PSPA P AP A+P S +
Sbjct: 1569 QASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTP 1628
Query: 57 QIQQLMNRSPATGQNVNITLQSVGPVVGGNQQITLAPLPLPSP----------------- 99
+ +P T + + PV+ + T+ P P+PSP
Sbjct: 1629 VPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALA 1688
Query: 100 -----TSPGFQFSAQPRRFEHGSPSYIQVTSPLSQQVQTQSPT-QPSPGPGQALQNVRAG 153
+SP S + P+ +P S V T + T +PGP +
Sbjct: 1689 PTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSL 1748
Query: 154 APGPGLGLCS---------------SSPTGGFVDASVLVRQIS------LSPSSGGHFVF 192
AP P L S SS ASV +S L P++
Sbjct: 1749 APAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLAL 1808
Query: 193 QDGSGLTQIAQGAQVQLQHPGT---PITVRERRPSQPHTQSGGTIHHLGPQSP--AAAGG 247
S + +Q + + + G P+T+ R P T+ GP SP A
Sbjct: 1809 APASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRS-GPPSPPSTATSF 1867
Query: 248 AGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGVLLPGAGG 307
G +P P PP S L ++++ + L R G L P G
Sbjct: 1868 GGPRPRRQPP-------PPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGALAPVYGT 1920
Query: 308 AAGFGMTSPPPPTSP 322
T P P SP
Sbjct: 1921 EVLDFCTLPQPVASP 1935
Score = 40.4 bits (93), Expect = 0.028
Identities = 66/313 (21%), Positives = 116/313 (37%), Gaps = 34/313 (10%)
Query: 428 EEEEEEEEEEKSEVIN-------DEQALAGSLVAGAGSTVETDLFKRQQAMPSTGMAEQS 480
EEEEE +++ ++ DE+ + + A A E F P+ G E++
Sbjct: 2227 EEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFPA-GEGEEA 2285
Query: 481 KRPRLEVGHQGVVFQHPGADAGVPLQQLMPTAQGGMPPTPQAAQLAGQ---RQSQQQYDP 537
RP G + + ++QL P + M + + + +Q+++Q +
Sbjct: 2286 GRP----GAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEA 2341
Query: 538 STGPPVQNAASLHTPLPQLPGRLPPAGVPTAA--------LSSALQFAQQPQVVEAQTQL 589
+ + A LPQ P AG ++ S + ++P ++
Sbjct: 2342 AR-KDLDQAKEEVFRLPQEEEEGPGAGDESSCGTGGGTHRRSKKAKAPERPGTRVSERLR 2400
Query: 590 QIPVKTQQPNVP--IPAPPSSQLPIPPS-QPAQLALHVPTPGKVQVQASQLSSLPQMVAS 646
+TQ N I A + PP PA+ + P P AS +++P +V
Sbjct: 2401 GARAETQGANHTPVISAHQTRSTTTPPRCSPARERVPRPAPRPRPTPASAPAAIPALV-- 2458
Query: 647 TRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKALSPVTSRTP 706
PV + P P P T + PV P P++ P + P+ A +P + TP
Sbjct: 2459 ---PVPVSAPVPISAPNPIT--ILPVHILPSPPPPSQIPPCSSPACTPPPACTPPPAHTP 2513
Query: 707 GVVASAPTKPQSP 719
+ P SP
Sbjct: 2514 PPAQTCLVTPSSP 2526
Score = 40.0 bits (92), Expect = 0.036
Identities = 86/354 (24%), Positives = 121/354 (34%), Gaps = 71/354 (20%)
Query: 39 AAPFAPSASPSAPQSPSYQIQQLMNRSPA----TGQNVNITLQSVGPVVGGNQQITLAPL 94
AAP S++ S+P+ PS + R+ A GQ Q GP V L L
Sbjct: 2699 AAPSTSSSATSSPEGPS-PARPPRRRTSADVEIRGQGTGRPGQPPGPKV-------LRKL 2750
Query: 95 PLPSPTSPGFQFSAQPRRFEHGSPSYIQVTSPLSQQVQTQSPTQPSPGPGQALQNVRAGA 154
P T + + RR + G+ S + V S T SPG +
Sbjct: 2751 PGRLVTVVEEKELVRRRRQQRGAASTL---------VPGVSETSASPGSPSVRSMSGPES 2801
Query: 155 PGPGLGLCSSSPTGGF----VDASVLVRQISLSPSSGGHFVFQDGSGLTQIAQGAQVQLQ 210
P G C ++P+ + R I L + GG DG+ L
Sbjct: 2802 SPPIGGPCEAAPSSSLPTPPQQPFIARRHIELGVTGGGSPENGDGALLAI---------- 2851
Query: 211 HPGTPITVRERRPSQPHTQ----SGGTIHHLGPQSPAAAGGAGLQPLASPSHITTANLPP 266
TP V+ RR P G P S G P+ P + A+
Sbjct: 2852 ---TPPAVKRRRGRPPKKNRSPADAGRGVDEAPSSTLKGKTNGADPVPGPETLIVAD--- 2905
Query: 267 QISSIIQGQLVQQQQVLQGPPLPRPLGF------------ERTPGVLLPGAGGAAGFG-- 312
+++ QL+ Q L P+ RP + + +PG +AG G
Sbjct: 2906 ---PVLEPQLIPGPQPLGPQPVHRPNPLLSPVEKRRRGRPPKARDLPIPGTISSAGDGNS 2962
Query: 313 --MTSPPPPTSPSRTAVPPGLSSLPLTSVGNTG-----MKKVPKKLEEIPPASP 359
T PPP SP T +PP L P +V NT PK+ PP +P
Sbjct: 2963 ESRTQPPPHPSP-LTPLPP-LLVCPTATVANTVTTVTISTSPPKRKRGRPPKNP 3014
Score = 38.9 bits (89), Expect = 0.080
Identities = 85/365 (23%), Positives = 133/365 (36%), Gaps = 94/365 (25%)
Query: 25 GEEQPAHPNPPPSPA---APFAPSASPSAP-----QSPSYQIQQLMNRSPATGQNVNITL 76
G E A P P P P A SASP+ P P + L P +G +
Sbjct: 1029 GPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPV-LLPPLQPNSGSLPQVLP 1087
Query: 77 QSVGPVVGGNQ----QITLAPLPLPSPT------SPGFQFSAQPRRFEHG---SPSYIQV 123
+G + G ++ ++L P P P+P PG +P G P+
Sbjct: 1088 SPLGVLSGTSRPPTPTLSLKPTP-PAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATT 1146
Query: 124 TSPLSQQVQTQSPTQPSPGPGQALQNVRAGAPGPGLGLCSSSPTGGFVDASVLVRQISLS 183
TS + T + P+P P + + + A P + S AS+ R ++
Sbjct: 1147 TSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQL-----ASLAQRPVA-- 1199
Query: 184 PSSGGH--FVFQ-DGSGLTQIAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQ 240
++GG FQ G+ LT GAQV+ G P R + + H S G HHL
Sbjct: 1200 -NAGGSKPLTFQIQGNKLT--LTGAQVRQLAVGQP---RPLQRNVVHLVSAGGQHHL--- 1250
Query: 241 SPAAAGGAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGV 300
++ P+H+ L+Q GP TP
Sbjct: 1251 ------------ISQPAHVA---------------LIQAVAPTPGP----------TPVS 1273
Query: 301 LLPGAGGAAGFGMTSPPPPTSPSRTAVPPGLSSLPLTSVGNTGMKKVPKK------LEEI 354
+LP ++P +P+ ++P + +P T V NTG+ K+ + L +
Sbjct: 1274 VLPS---------STPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGLTPV 1324
Query: 355 PPASP 359
PP +P
Sbjct: 1325 PPLAP 1329
Score = 37.4 bits (85), Expect = 0.23
Identities = 113/519 (21%), Positives = 170/519 (32%), Gaps = 111/519 (21%)
Query: 1405 EISTSAAPAARPAAAKLKASRLFQPVQYGQKPEGRTVAFPSTHPPRTAAPTTASAA---P 1461
E+ SAA + P L+A R + + + P AAP+T+S+A P
Sbjct: 2653 ELPPSAA-SDEPLQEPLEADRTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSATSSP 2711
Query: 1462 QGPLRGRPPIATFSANPEAKAAAAPFQTSQASASAPRHQPA------------------- 1502
+GP RPP SA+ E + R P
Sbjct: 2712 EGPSPARPPRRRTSADVEIRGQGTGRPGQPPGPKVLRKLPGRLVTVVEEKELVRRRRQQR 2771
Query: 1503 --------SASSTAASPAHPAKLRAQTTAQASTP-GQP---------PPQPQAP------ 1538
S T+ASP P+ +R+ + ++S P G P P PQ P
Sbjct: 2772 GAASTLVPGVSETSASPGSPS-VRSMSGPESSPPIGGPCEAAPSSSLPTPPQQPFIARRH 2830
Query: 1539 ---------SHAAGQSAL---------PQRLVLPSQAQARLPSGEVVKIAQLASITGPQS 1580
S G AL +R P + ++ +G V A +++ G +
Sbjct: 2831 IELGVTGGGSPENGDGALLAITPPAVKRRRGRPPKKNRSPADAGRGVDEAPSSTLKGKTN 2890
Query: 1581 RVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGSVLQIVSAP--GQPYLRAPGPV 1638
P TL Q QP+ +L V G+P P+
Sbjct: 2891 GADPVPGPETLIVADPVLEPQLIPGPQPLGPQPVHRPNPLLSPVEKRRRGRPPKARDLPI 2950
Query: 1639 VMQTVSQAGAVHGALGSKPPAGGPSPAPLT---PQVGVPGRVAVNALAVGEPGTASKPAS 1695
T+S AG + ++PP P P+PLT P + P N + T S P
Sbjct: 2951 P-GTISSAGDGNSESRTQPP---PHPSPLTPLPPLLVCPTATVANTVTTVTIST-SPPKR 3005
Query: 1696 PIGGPTQEEKTRLLKERLDQIYLVNERRCSQAPVYGRD---LLRICALPSHGRVQWRGSL 1752
G P + + R SQ PV RD +L C L + Q +G
Sbjct: 3006 KRGRPPKNPPS---------------PRPSQLPVLDRDSTSVLESCGLGRRRQPQGQGES 3050
Query: 1753 DGRRGKEAGP-----------AHSYTSSSESPSELMLTLCRCGESLQDVIDRVAFVIPPV 1801
+G E G +S +++ + + L D + PPV
Sbjct: 3051 EGSSSDEDGSRPLTRLARLRLEAEGMRGRKSGGSMVVAVIQDDLDLADSGPGGLELTPPV 3110
Query: 1802 VAAPPSLRVPR------PPPLYSHRMRILRQGLREHAAP 1834
V+ P LR R PPL + ++ R G +P
Sbjct: 3111 VSLTPKLRSTRLRPGSLVPPLETEKLPRKRAGAPVGGSP 3149
Score = 37.4 bits (85), Expect = 0.23
Identities = 41/137 (29%), Positives = 49/137 (35%), Gaps = 34/137 (24%)
Query: 601 PIPAPPSSQLPIPPSQPAQLALHVP-------------------TPGKVQVQASQLSSLP 641
P A PSS LP PP QP H+ TP V+ + +
Sbjct: 2808 PCEAAPSSSLPTPPQQPFIARRHIELGVTGGGSPENGDGALLAITPPAVKRRRGRPPKKN 2867
Query: 642 QMVASTRLPVDPAPPC--------PRPLPTSSTSSLA-PVSGSG--PGPSPARSSPVNRP 690
+ A VD AP P+P T +A PV PGP P PV+RP
Sbjct: 2868 RSPADAGRGVDEAPSSTLKGKTNGADPVPGPETLIVADPVLEPQLIPGPQPLGPQPVHRP 2927
Query: 691 SSATNKALSPVTSRTPG 707
N LSPV R G
Sbjct: 2928 ----NPLLSPVEKRRRG 2940
Score = 36.2 bits (82), Expect = 0.52
Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 16/184 (8%)
Query: 579 QPQVVEAQTQLQIPVKTQQPNVPI----PAPPSSQLPIPPSQPAQLALHVPTPGKV---- 630
+P ++ LQ PV Q+ + P P +P+ P +L+ PTPG V
Sbjct: 988 KPVKMKVNRMLQ-PVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQ-PTPGPVPQVL 1045
Query: 631 --QVQASQLSSLPQMVASTRLP----VDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPARS 684
+ S + P ++ ++R P + P P LP S L +SG+ P+P S
Sbjct: 1046 PASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLS 1105
Query: 685 SPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQNATSSQDSSQDTLTEQITLENQV 744
P+ P S + + P P AT++ ++ T +
Sbjct: 1106 LKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPA 1165
Query: 745 HQRI 748
QR+
Sbjct: 1166 PQRL 1169
Score = 36.2 bits (82), Expect = 0.52
Identities = 40/152 (26%), Positives = 59/152 (38%), Gaps = 17/152 (11%)
Query: 2499 QQPAVAQPPPPQPQPP--PPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPV 2556
Q ++A PP P P P P P +A PA + P P P P
Sbjct: 1744 QTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAA 1803
Query: 2557 QAPAKAQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQ--SIN 2614
Q A A PA T S A A ++ S +G + + V ++ +P + + ++
Sbjct: 1804 QTLALA-PASTQ--SPASQASSLVVSASG--------AAPLPVTMVSRLPVSKDEPDTLT 1852
Query: 2615 KRLASPVAPGALTTPGGSAPAQVVHTQPPPRA 2646
R P P T+ GG P + PPPR+
Sbjct: 1853 LRSGPPSPPSTATSFGGPRPRR--QPPPPPRS 1882
Score = 35.4 bits (80), Expect = 0.89
Identities = 39/131 (29%), Positives = 51/131 (38%), Gaps = 15/131 (11%)
Query: 597 QPNVPIPAP-PSSQLP--IPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTR----- 648
Q P P P P S LP P + PA L +P QV + +++ + R
Sbjct: 1261 QAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAAN-QVPPTMVNNTGVVKIVVRQAPRD 1319
Query: 649 --LPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKALSP----VT 702
PV P P PRP + + L P PG P + R T + P V
Sbjct: 1320 GLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVH 1379
Query: 703 SRTPGVVASAP 713
S +P V ASAP
Sbjct: 1380 SPSPEVSASAP 1390
Score = 32.0 bits (71), Expect = 9.8
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 12/149 (8%)
Query: 560 LPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSSQLPIPPSQPAQ 619
L P+ + ++ Q+ + ++ + V + +P+ S+ L +PPS +
Sbjct: 2602 LTPSAPSLTLEAGSIPNGQEQEAPDSAEGTTLTVLPEGEELPLCVSESNGLELPPSAASD 2661
Query: 620 LALHVPTPGKVQVQASQLSS-LPQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPG 678
L P ++A + S L + T P P + STSS A S G
Sbjct: 2662 EPLQEP------LEADRTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSATSSPE--G 2713
Query: 679 PSPARSSPVNRPSSATNKALSPVTSRTPG 707
PSPAR P R +SA + T R PG
Sbjct: 2714 PSPAR--PPRRRTSADVEIRGQGTGR-PG 2739
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 228 bits (582), Expect = 5e-59
Identities = 232/922 (25%), Positives = 393/922 (42%), Gaps = 97/922 (10%)
Query: 490 QGVVFQHPGADAGVPLQQLMPTAQGG-----MPPTPQAAQLAGQRQSQQQYDPSTGPPVQ 544
QG + HP + G P P + GG MPP+ A + G Q+ Q P+ GP
Sbjct: 118 QGYMSPHP-SPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQ--PNRGPSPF 174
Query: 545 NAASLHTPLPQL-------PGRLPPAGVPTAALSS----ALQFAQQPQVVEAQTQLQIPV 593
+ LH Q+ G+ P + A LQ QQ Q + Q Q Q
Sbjct: 175 SPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQ 234
Query: 594 KTQQPNVPIPAPPSSQLPIP-------PSQPAQLALHVPTPGKVQVQA--SQLSSLPQMV 644
+ QQP P P + Q P PS P TP K+ V A + S P
Sbjct: 235 QQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAA 294
Query: 645 ASTRLPVDPAPPCPRPLPTSSTSSLA---PVSGSGPGPSPARSSPVNRPSSATNKALSPV 701
A P P P+P P + L S P P PV + + +
Sbjct: 295 AQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARI 354
Query: 702 TSRTPGVVASAPTKPQSPAQNATSSQDSS-----QDTLTEQI--------TLENQVHQRI 748
R + + P AT + Q L +++ TLE ++ +
Sbjct: 355 AHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKA 414
Query: 749 AELRKAGLWSQRRLPKL--------QEAPRPKSHWDYLLEEMQWMATDFAQERRWKVAAA 800
+ K + R+ + QE R + H +YL +Q A DF + R
Sbjct: 415 YKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH-AKDFKEYHRSVAGKI 473
Query: 801 KKLVRTVVRHHEEKQLREERGKKE--EQSRLRRIAASTAREIECFWSNIEQVVEIKLRVE 858
+KL + V H + RE++ + E E+ R+RR+ A + E + I+Q + +L
Sbjct: 474 QKLSKAVATWHANTE-REQKKETERIEKERMRRLMAE---DEEGYRKLIDQKKDRRLAYL 529
Query: 859 LEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDE--VDDEE 916
L++ + NL + K+ Q + RK+KA + E + +
Sbjct: 530 LQQTDEYVANLTNLVWEHKQA--------QAAKEKKKRRRRKKKAEENAEGGESALGPDG 581
Query: 917 ETIEEEEANEGV---VDHQTELSNLAKEAELPLLDLMKLYEGAFLPSSQWPRPKPDGEDT 973
E I+E + V H TE + E P + + PR + D+
Sbjct: 582 EPIDESSQMSDLPVKVTH-TETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDS 640
Query: 974 SGEEDADDCPGDRESRKDLVLIDSLFIMDQFKAAERMNIGKPNAKDIADVTAVAEAILPK 1033
EE+ ++ R+ ++ +L+D ++ + I + +D+ D ++ +
Sbjct: 641 DYEEEDEEEESSRQETEEKILLDPN--SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGS 698
Query: 1034 GSA-----RVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQ 1088
S ++ V+ + L+ G L+ YQ GL+W+ LY NLNGILADE GLGKT+Q
Sbjct: 699 QSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQ 758
Query: 1089 IIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEW 1148
IA +L ++ GP+L++V + W E +W P + +SY G+ ++
Sbjct: 759 TIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGT-PAMRRSLVPQ 817
Query: 1149 AEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFT-LQSQQRL 1207
F+V +T+Y + ++RWK +++DE R+K + + + T + +R+
Sbjct: 818 LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRI 877
Query: 1208 LLIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLRAPSEE---SQDYYHKVVIR 1258
LL +PL N ELW +++FL+P I + + ++P E +++ ++ R
Sbjct: 878 LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRR 937
Query: 1259 LHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY-----EDVILQPGTQEALK 1313
LH+V +PF+LRR K++VE QL +K E+V+KC +S QK LY + ++L G+++ K
Sbjct: 938 LHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKK 997
Query: 1314 -SGHFVNVLSILVRLQRICNHP 1334
G +++ +++L++ICNHP
Sbjct: 998 GKGGAKTLMNTIMQLRKICNHP 1019
Score = 103 bits (256), Expect = 3e-21
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK E L +L KL++ RVL+ QM ++ I+E + F Y+R+D SE R L
Sbjct: 1049 SGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAAL 1108
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
++ FN + F +LST + G+NL ADTVV +D+D NP D +AQ+ RIG+ +
Sbjct: 1109 LKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNE 1168
Query: 1979 IHIYRLVSGNSIEEKLL 1995
+ + RL + NS+EEK+L
Sbjct: 1169 VRVLRLCTVNSVEEKIL 1185
Score = 85.5 bits (210), Expect = 7e-16
Identities = 99/342 (28%), Positives = 130/342 (38%), Gaps = 63/342 (18%)
Query: 2507 PPPQPQPPPPPQQPPPPLPQPQAAGSQ----PPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
P P P P P P P P P P P GPP+V P P + P + +
Sbjct: 15 PSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVS-HPMPTMGSTDFPQEGMHQM 73
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPV- 2621
I ++ S+ GT M G P + ++ SP
Sbjct: 74 HKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPG--------MGPPQSPMDQHSQGYMSPHP 125
Query: 2622 ----APGALTTP---GGSAPAQVVHTQPPPRAVGSP-ATATPDLVSMATTQGVRAVTSVT 2673
AP +++P GG P Q+ +QP G P A + P+ +G + V
Sbjct: 126 SPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN-------RGPSPFSPVQ 178
Query: 2674 ASAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQ 2733
+ L +P+ Q + + GK P L+QQQQQQQQQQQQQQQ
Sbjct: 179 LHQLRAQILAYKMLARGQPLPETLQ---LAVQGKRTLPG----LQQQQQQQQQQQQQQQQ 231
Query: 2734 QQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMP-- 2791
QQQQQQQ QQQ Q T Q Q + S + G TP QKL +P
Sbjct: 232 QQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTP--------QKLPVPAP 283
Query: 2792 ---PQPPPPQA--------------QSAPPQPTAQVQVQTSQ 2816
P P PP A Q AP QP+ +Q+Q Q
Sbjct: 284 GGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQ 325
Score = 58.9 bits (141), Expect = 8e-08
Identities = 69/306 (22%), Positives = 126/306 (41%), Gaps = 40/306 (13%)
Query: 2449 NPFQKNPKHASVLAESGINYDKPLPPIQVASLRAER----IAKEKKALADQQKAQQPAVA 2504
+P Q + A +LA + +PLP +++ +R + ++++ QQ+ QQ
Sbjct: 175 SPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQ 234
Query: 2505 QPPPPQPQPPPPP---QQPPPPLPQPQAAGSQPP-AGPPAVQPQPQPQPQTQPQPVQAPA 2560
Q PQ QPP P QQ P + + +G P +GP Q P P P +P P PA
Sbjct: 235 QQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAP-PA 293
Query: 2561 KAQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASP 2620
AQP P AV G + G P+ Q K+ S
Sbjct: 294 AAQP------------------------PAAAVPGPSVPQPAPGQPSPVLQLQQKQ--SR 327
Query: 2621 VAPGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTT 2680
++P + P G P +++ + R A +L ++ + T T
Sbjct: 328 ISP--IQKPQGLDPVEILQEREY-RLQARIAHRIQELENLPGSLPPDLRTKATVELKALR 384
Query: 2681 NLTPVQTPARSLVPQVSQATGVQ--LPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQ 2738
L + + +V + + T ++ L K + Q LR+ + ++ ++QQ+ +Q++++
Sbjct: 385 LLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKR 444
Query: 2739 QQQQQQ 2744
+Q+ Q+
Sbjct: 445 RQKHQE 450
Score = 40.8 bits (94), Expect = 0.021
Identities = 45/180 (25%), Positives = 61/180 (33%), Gaps = 13/180 (7%)
Query: 2945 PQAAQGPAAVQQKITAQQITTPGAQQKVAY---AAQPALKTQF--LTTPISQAQKLAGAQ 2999
P + GP Q + PG Q ++ P Q L I + LA Q
Sbjct: 137 PMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQ 196
Query: 3000 QVQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTAT 3059
+ +Q+A VQ + + +QQ QQ Q Q QQ Q P T
Sbjct: 197 PLPETLQLA-----VQGKRTLPGLQQQQQQQQQQQQQQ---QQQQQQQQQPQQQPPQPQT 248
Query: 3060 AQVVQQKLIQQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPKLQMRVPAVRLKTPTKP 3119
Q Q L+ + L P P VPA PS P + PA + P+ P
Sbjct: 249 QQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVP 308
Score = 37.4 bits (85), Expect = 0.23
Identities = 56/220 (25%), Positives = 76/220 (34%), Gaps = 13/220 (5%)
Query: 1497 PRHQPASASSTAASPAHPAKLRAQTTAQASTPGQPPPQPQAPSHAAGQ--SALPQRLVLP 1554
P P S HP+ L A + G P PQ P G PQ + P
Sbjct: 108 PPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQP 167
Query: 1555 SQAQARLPSGEVVKIAQL-ASITGPQSRVAQPETPVTLQF--QGSKFTLSHSQLRQLTAG 1611
++ + V++ QL A I + P TLQ QG K TL Q +Q
Sbjct: 168 NRGPSPF---SPVQLHQLRAQILAYKMLARGQPLPETLQLAVQG-KRTLPGLQQQQQQQQ 223
Query: 1612 QPLQLQGSVLQIVSAPGQPYLRAPGPVVMQTVSQAGAVHG-ALGSKPPAGGPSPAPLTPQ 1670
Q Q Q Q QP + P P Q A + G P GPS P
Sbjct: 224 QQQQQQQQQQQ---QQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPV 280
Query: 1671 VGVPGRVAVNALAVGEPGTASKPASPIGGPTQEEKTRLLK 1710
GR + A +P A+ P + P + + +L+
Sbjct: 281 PAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQ 320
Score = 35.8 bits (81), Expect = 0.68
Identities = 44/201 (21%), Positives = 74/201 (36%), Gaps = 36/201 (17%)
Query: 139 PSPGPGQALQNVRAGAPGPG------LGLCSSSPTGGFVDASVLVRQISLSPSSGGHFVF 192
PSPGPG + + +PGPG + SP V + + P G H +
Sbjct: 15 PSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFPQEGMHQMH 74
Query: 193 QDGSGLTQ----------IAQGAQVQLQHPG-----TPITVRERRPSQPHTQSGGTIHHL 237
+ G+ +G ++ HPG +P+ + PH G H+
Sbjct: 75 KPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHV 134
Query: 238 G----------PQSPAAAGGAGL----QPLASPSHITTANLPPQISSIIQGQLVQQQQVL 283
PQ P + GA + Q ++ P+ + P Q+ ++ Q++ + +
Sbjct: 135 SSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQ-LRAQILAYKMLA 193
Query: 284 QGPPLPRPLGFERTPGVLLPG 304
+G PLP L LPG
Sbjct: 194 RGQPLPETLQLAVQGKRTLPG 214
Score = 34.7 bits (78), Expect = 1.5
Identities = 61/288 (21%), Positives = 97/288 (33%), Gaps = 40/288 (13%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPA 2565
P PPQ PP QP +P A SQP GP P Q + Q + A+ QP
Sbjct: 143 PTPPQ-M---PPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQP- 197
Query: 2566 ITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGA 2625
L T++ +V G T+ G+ Q ++
Sbjct: 198 ---------LPETLQLAVQGK-------------RTLPGLQQQQQQQQQQQQQQQQQQQQ 235
Query: 2626 LTTPGGSAPAQVVHTQPPPRAV--GSPATATPDLVSMATTQGVRAVTSVTASAVVTTNLT 2683
P P Q P V P+ P+L +T Q + V
Sbjct: 236 QQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKL---------PVPAPGGR 286
Query: 2684 PVQTPARSLVPQVSQATGVQLPGKTI-TPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQ 2742
P P + P + G +P P+ L+Q+Q + Q+ Q + Q++
Sbjct: 287 PSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQER 346
Query: 2743 QQQQQTTTTSQVQ-VPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQ 2789
+ + Q ++Q + + G + KA +L L+ Q+Q Q
Sbjct: 347 EYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQ 394
Score = 33.1 bits (74), Expect = 4.4
Identities = 43/169 (25%), Positives = 54/169 (31%), Gaps = 13/169 (7%)
Query: 2 HHGTGP-QNVQHQLQRSRACPGSEGEEQPAHPNPPPSPAAPFAPSASPSAPQS---PSYQ 57
H G GP Q+ Q + P P H + P S P P PS P + Q
Sbjct: 103 HPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQ 162
Query: 58 IQQLMNRSPATGQNVNITLQSVGPVVGGNQQITLAPLP-------LPSPTSPGFQFSAQP 110
NR P+ V + Q ++ PLP T PG Q Q
Sbjct: 163 AMSQPNRGPSPFSPVQLH-QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQ 221
Query: 111 RRFEHGSPSYIQVTSPLSQQVQTQSPTQPSPGPGQALQNVRAGAPGPGL 159
++ + Q QQ Q TQ P N R PGP L
Sbjct: 222 QQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYN-RPSGPGPEL 269
Score = 32.3 bits (72), Expect = 7.5
Identities = 69/305 (22%), Positives = 98/305 (32%), Gaps = 74/305 (24%)
Query: 2791 PPQPPPPQAQ----SAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTGTTVANLQ 2846
PPQ P Q S P P + S P P + +PGAL+ G
Sbjct: 108 PPQSPMDQHSQGYMSPHPSPLGAPE-HVSSPMSGGGPTPPQMPPSQPGALIPGDP----- 161
Query: 2847 VARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISV 2906
Q +Q P Q+ + +++ P TL + V G
Sbjct: 162 ----------QAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRT 211
Query: 2907 AIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTP 2966
G Q+ QQ + +QQ QQQ+ QPQ QQ P
Sbjct: 212 LPGLQQQ-----------QQQQQQQQQQQQQQQQQQQQPQ--------------QQPPQP 246
Query: 2967 GAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQV 3026
QQ+ QPAL P +L+G Q KLP V
Sbjct: 247 QTQQQ----QQPALVN--YNRPSGPGPELSGPSTPQ------KLP--------------V 280
Query: 3027 ASASQQASPQTVALTQATAAGQQVQMIPAVTATAQVVQQKLIQQQVVTTASAPLQTPGAP 3086
+ + SP A Q AA P+V A ++Q Q + +P+Q P
Sbjct: 281 PAPGGRPSPAPPAAAQPPAAAVPG---PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGL 337
Query: 3087 NPAQV 3091
+P ++
Sbjct: 338 DPVEI 342
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 228 bits (582), Expect = 5e-59
Identities = 232/922 (25%), Positives = 393/922 (42%), Gaps = 97/922 (10%)
Query: 490 QGVVFQHPGADAGVPLQQLMPTAQGG-----MPPTPQAAQLAGQRQSQQQYDPSTGPPVQ 544
QG + HP + G P P + GG MPP+ A + G Q+ Q P+ GP
Sbjct: 118 QGYMSPHP-SPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQ--PNRGPSPF 174
Query: 545 NAASLHTPLPQL-------PGRLPPAGVPTAALSS----ALQFAQQPQVVEAQTQLQIPV 593
+ LH Q+ G+ P + A LQ QQ Q + Q Q Q
Sbjct: 175 SPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQ 234
Query: 594 KTQQPNVPIPAPPSSQLPIP-------PSQPAQLALHVPTPGKVQVQA--SQLSSLPQMV 644
+ QQP P P + Q P PS P TP K+ V A + S P
Sbjct: 235 QQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAA 294
Query: 645 ASTRLPVDPAPPCPRPLPTSSTSSLA---PVSGSGPGPSPARSSPVNRPSSATNKALSPV 701
A P P P+P P + L S P P PV + + +
Sbjct: 295 AQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARI 354
Query: 702 TSRTPGVVASAPTKPQSPAQNATSSQDSS-----QDTLTEQI--------TLENQVHQRI 748
R + + P AT + Q L +++ TLE ++ +
Sbjct: 355 AHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKA 414
Query: 749 AELRKAGLWSQRRLPKL--------QEAPRPKSHWDYLLEEMQWMATDFAQERRWKVAAA 800
+ K + R+ + QE R + H +YL +Q A DF + R
Sbjct: 415 YKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQH-AKDFKEYHRSVAGKI 473
Query: 801 KKLVRTVVRHHEEKQLREERGKKE--EQSRLRRIAASTAREIECFWSNIEQVVEIKLRVE 858
+KL + V H + RE++ + E E+ R+RR+ A + E + I+Q + +L
Sbjct: 474 QKLSKAVATWHANTE-REQKKETERIEKERMRRLMAE---DEEGYRKLIDQKKDRRLAYL 529
Query: 859 LEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDE--VDDEE 916
L++ + NL + K+ Q + RK+KA + E + +
Sbjct: 530 LQQTDEYVANLTNLVWEHKQA--------QAAKEKKKRRRRKKKAEENAEGGESALGPDG 581
Query: 917 ETIEEEEANEGV---VDHQTELSNLAKEAELPLLDLMKLYEGAFLPSSQWPRPKPDGEDT 973
E I+E + V H TE + E P + + PR + D+
Sbjct: 582 EPIDESSQMSDLPVKVTH-TETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDS 640
Query: 974 SGEEDADDCPGDRESRKDLVLIDSLFIMDQFKAAERMNIGKPNAKDIADVTAVAEAILPK 1033
EE+ ++ R+ ++ +L+D ++ + I + +D+ D ++ +
Sbjct: 641 DYEEEDEEEESSRQETEEKILLDPN--SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGS 698
Query: 1034 GSA-----RVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQ 1088
S ++ V+ + L+ G L+ YQ GL+W+ LY NLNGILADE GLGKT+Q
Sbjct: 699 QSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQ 758
Query: 1089 IIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEW 1148
IA +L ++ GP+L++V + W E +W P + +SY G+ ++
Sbjct: 759 TIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGT-PAMRRSLVPQ 817
Query: 1149 AEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFT-LQSQQRL 1207
F+V +T+Y + ++RWK +++DE R+K + + + T + +R+
Sbjct: 818 LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRI 877
Query: 1208 LLIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLRAPSEE---SQDYYHKVVIR 1258
LL +PL N ELW +++FL+P I + + ++P E +++ ++ R
Sbjct: 878 LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRR 937
Query: 1259 LHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY-----EDVILQPGTQEALK 1313
LH+V +PF+LRR K++VE QL +K E+V+KC +S QK LY + ++L G+++ K
Sbjct: 938 LHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKK 997
Query: 1314 -SGHFVNVLSILVRLQRICNHP 1334
G +++ +++L++ICNHP
Sbjct: 998 GKGGAKTLMNTIMQLRKICNHP 1019
Score = 103 bits (256), Expect = 3e-21
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK E L +L KL++ RVL+ QM ++ I+E + F Y+R+D SE R L
Sbjct: 1049 SGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAAL 1108
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
++ FN + F +LST + G+NL ADTVV +D+D NP D +AQ+ RIG+ +
Sbjct: 1109 LKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNE 1168
Query: 1979 IHIYRLVSGNSIEEKLL 1995
+ + RL + NS+EEK+L
Sbjct: 1169 VRVLRLCTVNSVEEKIL 1185
Score = 85.5 bits (210), Expect = 7e-16
Identities = 99/342 (28%), Positives = 130/342 (38%), Gaps = 63/342 (18%)
Query: 2507 PPPQPQPPPPPQQPPPPLPQPQAAGSQ----PPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
P P P P P P P P P P P GPP+V P P + P + +
Sbjct: 15 PSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVS-HPMPTMGSTDFPQEGMHQM 73
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPV- 2621
I ++ S+ GT M G P + ++ SP
Sbjct: 74 HKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPG--------MGPPQSPMDQHSQGYMSPHP 125
Query: 2622 ----APGALTTP---GGSAPAQVVHTQPPPRAVGSP-ATATPDLVSMATTQGVRAVTSVT 2673
AP +++P GG P Q+ +QP G P A + P+ +G + V
Sbjct: 126 SPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN-------RGPSPFSPVQ 178
Query: 2674 ASAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQ 2733
+ L +P+ Q + + GK P L+QQQQQQQQQQQQQQQ
Sbjct: 179 LHQLRAQILAYKMLARGQPLPETLQ---LAVQGKRTLPG----LQQQQQQQQQQQQQQQQ 231
Query: 2734 QQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMP-- 2791
QQQQQQQ QQQ Q T Q Q + S + G TP QKL +P
Sbjct: 232 QQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTP--------QKLPVPAP 283
Query: 2792 ---PQPPPPQA--------------QSAPPQPTAQVQVQTSQ 2816
P P PP A Q AP QP+ +Q+Q Q
Sbjct: 284 GGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQ 325
Score = 58.9 bits (141), Expect = 8e-08
Identities = 69/306 (22%), Positives = 126/306 (41%), Gaps = 40/306 (13%)
Query: 2449 NPFQKNPKHASVLAESGINYDKPLPPIQVASLRAER----IAKEKKALADQQKAQQPAVA 2504
+P Q + A +LA + +PLP +++ +R + ++++ QQ+ QQ
Sbjct: 175 SPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQ 234
Query: 2505 QPPPPQPQPPPPP---QQPPPPLPQPQAAGSQPP-AGPPAVQPQPQPQPQTQPQPVQAPA 2560
Q PQ QPP P QQ P + + +G P +GP Q P P P +P P PA
Sbjct: 235 QQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAP-PA 293
Query: 2561 KAQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASP 2620
AQP P AV G + G P+ Q K+ S
Sbjct: 294 AAQP------------------------PAAAVPGPSVPQPAPGQPSPVLQLQQKQ--SR 327
Query: 2621 VAPGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTT 2680
++P + P G P +++ + R A +L ++ + T T
Sbjct: 328 ISP--IQKPQGLDPVEILQEREY-RLQARIAHRIQELENLPGSLPPDLRTKATVELKALR 384
Query: 2681 NLTPVQTPARSLVPQVSQATGVQ--LPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQ 2738
L + + +V + + T ++ L K + Q LR+ + ++ ++QQ+ +Q++++
Sbjct: 385 LLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKR 444
Query: 2739 QQQQQQ 2744
+Q+ Q+
Sbjct: 445 RQKHQE 450
Score = 40.8 bits (94), Expect = 0.021
Identities = 45/180 (25%), Positives = 61/180 (33%), Gaps = 13/180 (7%)
Query: 2945 PQAAQGPAAVQQKITAQQITTPGAQQKVAY---AAQPALKTQF--LTTPISQAQKLAGAQ 2999
P + GP Q + PG Q ++ P Q L I + LA Q
Sbjct: 137 PMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQ 196
Query: 3000 QVQTQIQVAKLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTAT 3059
+ +Q+A VQ + + +QQ QQ Q Q QQ Q P T
Sbjct: 197 PLPETLQLA-----VQGKRTLPGLQQQQQQQQQQQQQQ---QQQQQQQQQPQQQPPQPQT 248
Query: 3060 AQVVQQKLIQQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPKLQMRVPAVRLKTPTKP 3119
Q Q L+ + L P P VPA PS P + PA + P+ P
Sbjct: 249 QQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVP 308
Score = 37.4 bits (85), Expect = 0.23
Identities = 56/220 (25%), Positives = 76/220 (34%), Gaps = 13/220 (5%)
Query: 1497 PRHQPASASSTAASPAHPAKLRAQTTAQASTPGQPPPQPQAPSHAAGQ--SALPQRLVLP 1554
P P S HP+ L A + G P PQ P G PQ + P
Sbjct: 108 PPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQP 167
Query: 1555 SQAQARLPSGEVVKIAQL-ASITGPQSRVAQPETPVTLQF--QGSKFTLSHSQLRQLTAG 1611
++ + V++ QL A I + P TLQ QG K TL Q +Q
Sbjct: 168 NRGPSPF---SPVQLHQLRAQILAYKMLARGQPLPETLQLAVQG-KRTLPGLQQQQQQQQ 223
Query: 1612 QPLQLQGSVLQIVSAPGQPYLRAPGPVVMQTVSQAGAVHG-ALGSKPPAGGPSPAPLTPQ 1670
Q Q Q Q QP + P P Q A + G P GPS P
Sbjct: 224 QQQQQQQQQQQ---QQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPV 280
Query: 1671 VGVPGRVAVNALAVGEPGTASKPASPIGGPTQEEKTRLLK 1710
GR + A +P A+ P + P + + +L+
Sbjct: 281 PAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQ 320
Score = 35.8 bits (81), Expect = 0.68
Identities = 44/201 (21%), Positives = 74/201 (36%), Gaps = 36/201 (17%)
Query: 139 PSPGPGQALQNVRAGAPGPG------LGLCSSSPTGGFVDASVLVRQISLSPSSGGHFVF 192
PSPGPG + + +PGPG + SP V + + P G H +
Sbjct: 15 PSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTDFPQEGMHQMH 74
Query: 193 QDGSGLTQ----------IAQGAQVQLQHPG-----TPITVRERRPSQPHTQSGGTIHHL 237
+ G+ +G ++ HPG +P+ + PH G H+
Sbjct: 75 KPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHV 134
Query: 238 G----------PQSPAAAGGAGL----QPLASPSHITTANLPPQISSIIQGQLVQQQQVL 283
PQ P + GA + Q ++ P+ + P Q+ ++ Q++ + +
Sbjct: 135 SSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQ-LRAQILAYKMLA 193
Query: 284 QGPPLPRPLGFERTPGVLLPG 304
+G PLP L LPG
Sbjct: 194 RGQPLPETLQLAVQGKRTLPG 214
Score = 34.7 bits (78), Expect = 1.5
Identities = 61/288 (21%), Positives = 97/288 (33%), Gaps = 40/288 (13%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPA 2565
P PPQ PP QP +P A SQP GP P Q + Q + A+ QP
Sbjct: 143 PTPPQ-M---PPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQP- 197
Query: 2566 ITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGA 2625
L T++ +V G T+ G+ Q ++
Sbjct: 198 ---------LPETLQLAVQGK-------------RTLPGLQQQQQQQQQQQQQQQQQQQQ 235
Query: 2626 LTTPGGSAPAQVVHTQPPPRAV--GSPATATPDLVSMATTQGVRAVTSVTASAVVTTNLT 2683
P P Q P V P+ P+L +T Q + V
Sbjct: 236 QQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKL---------PVPAPGGR 286
Query: 2684 PVQTPARSLVPQVSQATGVQLPGKTI-TPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQ 2742
P P + P + G +P P+ L+Q+Q + Q+ Q + Q++
Sbjct: 287 PSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQER 346
Query: 2743 QQQQQTTTTSQVQ-VPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQ 2789
+ + Q ++Q + + G + KA +L L+ Q+Q Q
Sbjct: 347 EYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQ 394
Score = 33.1 bits (74), Expect = 4.4
Identities = 43/169 (25%), Positives = 54/169 (31%), Gaps = 13/169 (7%)
Query: 2 HHGTGP-QNVQHQLQRSRACPGSEGEEQPAHPNPPPSPAAPFAPSASPSAPQS---PSYQ 57
H G GP Q+ Q + P P H + P S P P PS P + Q
Sbjct: 103 HPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQ 162
Query: 58 IQQLMNRSPATGQNVNITLQSVGPVVGGNQQITLAPLP-------LPSPTSPGFQFSAQP 110
NR P+ V + Q ++ PLP T PG Q Q
Sbjct: 163 AMSQPNRGPSPFSPVQLH-QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQ 221
Query: 111 RRFEHGSPSYIQVTSPLSQQVQTQSPTQPSPGPGQALQNVRAGAPGPGL 159
++ + Q QQ Q TQ P N R PGP L
Sbjct: 222 QQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYN-RPSGPGPEL 269
Score = 32.3 bits (72), Expect = 7.5
Identities = 69/305 (22%), Positives = 98/305 (32%), Gaps = 74/305 (24%)
Query: 2791 PPQPPPPQAQ----SAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTGTTVANLQ 2846
PPQ P Q S P P + S P P + +PGAL+ G
Sbjct: 108 PPQSPMDQHSQGYMSPHPSPLGAPE-HVSSPMSGGGPTPPQMPPSQPGALIPGDP----- 161
Query: 2847 VARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISV 2906
Q +Q P Q+ + +++ P TL + V G
Sbjct: 162 ----------QAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRT 211
Query: 2907 AIGQPQKAAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTP 2966
G Q+ QQ + +QQ QQQ+ QPQ QQ P
Sbjct: 212 LPGLQQQ-----------QQQQQQQQQQQQQQQQQQQQPQ--------------QQPPQP 246
Query: 2967 GAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQV 3026
QQ+ QPAL P +L+G Q KLP V
Sbjct: 247 QTQQQ----QQPALVN--YNRPSGPGPELSGPSTPQ------KLP--------------V 280
Query: 3027 ASASQQASPQTVALTQATAAGQQVQMIPAVTATAQVVQQKLIQQQVVTTASAPLQTPGAP 3086
+ + SP A Q AA P+V A ++Q Q + +P+Q P
Sbjct: 281 PAPGGRPSPAPPAAAQPPAAAVPG---PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGL 337
Query: 3087 NPAQV 3091
+P ++
Sbjct: 338 DPVEI 342
>gi|38708321 INO80 complex homolog 1 [Homo sapiens]
Length = 1556
Score = 221 bits (563), Expect = 9e-57
Identities = 160/581 (27%), Positives = 276/581 (47%), Gaps = 70/581 (12%)
Query: 790 AQERRWKVAAAKKLVRTVVRHHEEKQLREERGKKEEQSRLRRIAASTAREIECFWSNIEQ 849
A R + ++KL ++ L+ ++ KE R RR+ +E+ +W E+
Sbjct: 297 ASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARRLT----KEMLLYWKKYEK 352
Query: 850 VVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTD 909
V E + R E++ + L + R K + K + ++ L + RKR
Sbjct: 353 V-EKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQ 411
Query: 910 DEVD---DEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLMKLYEGAFLPSSQWPRP 966
+E+ ++ T + + GVV + T+ + + L K E A+ R
Sbjct: 412 EEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQAL---KNAENAYHIHQARTR- 467
Query: 967 KPDGEDTSGEEDADDCPGDRESRKDLVLIDSLFIMDQFKAAERMNIGKPNAKDIADVTAV 1026
S +EDA +ESR + +AA + G + +A+ +
Sbjct: 468 -------SFDEDA------KESRAAAL-----------RAANKSGTGFGESYSLANPSIR 503
Query: 1027 AEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKT 1086
A +P+ P++ G L+ YQ G++WLA LY + +NGILADE GLGKT
Sbjct: 504 AGEDIPQ-------------PTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKT 550
Query: 1087 VQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQ 1146
VQ IA AHLA E WGP L++ + + W E R+ P K+L Y G+ + K R+
Sbjct: 551 VQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRR 610
Query: 1147 EWAEPN------SFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFT 1200
W++ FHV ITSY + + F RV+W+ +V+DE Q +K + W+ +
Sbjct: 611 FWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQ 670
Query: 1201 LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGI------SRPYLSSPLRAPSEESQDYYHK 1254
Q + RLLL +P+ NT ELW ++HF++P + + S + + +E
Sbjct: 671 FQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDEN 730
Query: 1255 VVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKS 1314
+ RLH + +PF+LRR K+DVE +L+ K E ++ C+L++RQK LY+ + + ++ L+S
Sbjct: 731 QLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQS 790
Query: 1315 ---------GHFVNVLSILVRLQRICNHPGLVEPRHPGSSY 1346
++++++++ +++CNHP L E + S +
Sbjct: 791 SMGSTQQAQNTTSSLMNLVMQFRKVCNHPELFERQETWSPF 831
Score = 129 bits (323), Expect = 6e-29
Identities = 83/256 (32%), Positives = 139/256 (54%), Gaps = 13/256 (5%)
Query: 1859 DSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQE 1918
DSGKL AL +LL +LKS+G RVLI SQM M+D+LE ++ + TY+R+D ++ +R++
Sbjct: 1099 DSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRD 1158
Query: 1919 LMRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
++ F IF +LST + GINL ADTV+FYD+D NP +D +A + R+G+ K
Sbjct: 1159 MVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1218
Query: 1979 IHIYRLVSGNSIEEKLLKNG-TKDLIREVAAQGNDYSMAFLTQRTIQELFEVYSPMDDAG 2037
+ +YRL+ +IEE++L+ K I+ + G ++ L + + L +DD
Sbjct: 1219 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVVSLL-----LDDE- 1272
Query: 2038 FPVKAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEEDAQ---KSAQEGVLGPHTD 2094
+ E+ + L QE + ++ + K E +++ + K +EGV
Sbjct: 1273 ---ELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELDGKRRKEGVNLVIPF 1329
Query: 2095 ALSSDSENMPCDEEPS 2110
S+D+ N+ D + S
Sbjct: 1330 VPSADNSNLSADGDDS 1345
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 213 bits (541), Expect = 3e-54
Identities = 234/941 (24%), Positives = 393/941 (41%), Gaps = 136/941 (14%)
Query: 495 QHPGADAGVPLQQLMPTAQG--GMPPTP----QAAQLAGQRQSQQQYDPSTGPP--VQNA 546
Q G PL P A G PTP Q QL Q + + P +Q A
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203
Query: 547 ASLHTPLP----QLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPI 602
P+P Q+P LPP V P A P PN+P
Sbjct: 204 VQGKRPMPGMQQQMP-TLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPP 262
Query: 603 PAPPSSQLPIPPSQPAQLALHVPTPGKV--QVQASQLSSLPQMVASTRLPVDPAPPCPRP 660
P P +PP P Q P P A+ +S PQ + + P+P P
Sbjct: 263 PGPSG----VPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Query: 661 LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATN-----KALSPV----------TSRT 705
P +S G PA P+++ S + L PV +R
Sbjct: 319 PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARI 378
Query: 706 PGVVASAPTKPQSPAQNATSS--------------------------QDSSQDTLTEQIT 739
+ P S A + + +D++ +T
Sbjct: 379 AHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKA 438
Query: 740 LENQVHQRIAELR-KAGLWSQRRLPKLQEAPRPKSHWDYLLEEMQWMATDFAQERRWKVA 798
+ Q + E R L Q+++ QE R + H +YL +Q A DF + R
Sbjct: 439 YKRSKRQSLREARITEKLEKQQKIE--QERKRRQKHQEYLNSILQ-HAKDFKEYHRSVTG 495
Query: 799 AAKKLVRTVVRHHEEKQLREERGKKE--EQSRLRRIAASTAREIECFWSNIEQVVEIKLR 856
+KL + V +H + RE++ + E E+ R+RR+ A + E + I+Q + +L
Sbjct: 496 KIQKLTKAVATYHANTE-REQKKENERIEKERMRRL---MAEDEEGYRKLIDQKKDKRLA 551
Query: 857 VELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDEVDDEE 916
L++ + NL ++ R+ K A Q + +K+ + + +
Sbjct: 552 YLLQQTDEYVANLTELVRQHK--------AAQVAKEKKKKKKKKKAENAEGQTPAIGPDG 603
Query: 917 ETIEE--EEANEGVVDHQTELSNLAKEAELP-------LLDLMKLYEGAFLPSSQWPRPK 967
E ++E + ++ V E + + P L++ YE A P+
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVA---------PR 654
Query: 968 PDGEDTSGEEDADDCPGDR-----------ESRKDLVLIDSLFIMDQFKAAERMNIGKPN 1016
D E++ EE+ ++ ++ E +K + DS D + +I +
Sbjct: 655 SDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDS----DDVSEVDARHIIENA 710
Query: 1017 AKDIADVTAVAEAILPKG-------SARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLY 1069
+D+ D V++A L +G + VT V + ++ G L+ YQ GL+WL LY
Sbjct: 711 KQDVDDEYGVSQA-LARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLY 769
Query: 1070 RKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGL 1129
NLNGILADE GLGKT+Q IA +L ++ GP L++V + W E +W P +
Sbjct: 770 NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV 829
Query: 1130 KILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKG 1189
+SY GS +A + F+V +T+Y + ++RWK +++DE R+K
Sbjct: 830 VKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN 888
Query: 1190 MTERHWEAVFT-LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLR 1242
+ + + T + +RLLL +PL N ELW +++FL+P I + + ++P
Sbjct: 889 HHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA 948
Query: 1243 APSEE---SQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY 1299
E+ +++ ++ RLH+V +PF+LRR K++VE QL +K E+V+KC +S Q+ LY
Sbjct: 949 MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY 1008
Query: 1300 -----EDVILQPGTQEALK-SGHFVNVLSILVRLQRICNHP 1334
+ V+L G+++ K G +++ +++L++ICNHP
Sbjct: 1009 RHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Score = 98.6 bits (244), Expect = 9e-20
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK E L +L KL++ +VL+ QM ++ I+E + + Y+R+D +E R L
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+++FN F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1979 IHIYRLVSGNSIEEKLL 1995
+ + RL + NS+EEK+L
Sbjct: 1199 VRVLRLCTVNSVEEKIL 1215
Score = 45.8 bits (107), Expect = 7e-04
Identities = 40/156 (25%), Positives = 57/156 (36%), Gaps = 31/156 (19%)
Query: 2447 GMNPFQKNPKH---ASVLAESGINYDKPLPP-IQVASLRAERIAKEKKALADQQKAQQPA 2502
G PF +N H A ++A + +PLP +Q+A + ++ + A
Sbjct: 168 GPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSA 227
Query: 2503 VAQPPPPQPQPPPPPQQPPPPLPQPQAAG--SQPPAGPPAVQP---------QPQPQPQ- 2550
P P P P P P PP +P G + PP GP V P P+P P+
Sbjct: 228 TGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
Query: 2551 ---------------TQPQPVQAPAKAQPAITTGGS 2571
PQP P+ A PA+ S
Sbjct: 288 PMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS 323
Score = 43.9 bits (102), Expect = 0.003
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQ----PQPQPQTQPQPVQAPAK 2561
PP P PP P QPP P+P G A P PQ PQP + P P P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 2562 AQPAI 2566
A P +
Sbjct: 322 ASPVM 326
Score = 42.7 bits (99), Expect = 0.006
Identities = 30/71 (42%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 2505 QPP--PPQPQPPPP------PQQPPPPLPQPQAAG---SQPPAGPPAVQPQPQPQPQTQP 2553
QPP PP+P P P P P L PQ G PPA PPA P PQ Q+
Sbjct: 275 QPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 2554 QPVQAPAKAQP 2564
QP Q PA P
Sbjct: 335 QPAQ-PAPMVP 344
Score = 40.4 bits (93), Expect = 0.028
Identities = 89/366 (24%), Positives = 124/366 (33%), Gaps = 57/366 (15%)
Query: 32 PNPPPSPAAPFAPSASPSAPQSPSYQIQQLMNRSPATGQNVNITLQSVGPVVGGNQQITL 91
P P PSP A PS PS + S +M SP + + + GP GG Q +
Sbjct: 18 PGPGPSPGAMLGPSPGPSPGSAHS-----MMGPSPGP-PSAGHPIPTQGP--GGYPQDNM 69
Query: 92 APLPLPSPTSPGFQFSAQPRRFE--------HGSPSYIQVTSPLSQQVQTQSPTQPSPGP 143
+ P + S PR + G SP+ Q S PSP
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ----HSQGYPSPLG 125
Query: 144 GQALQNVRAGAPGPGLG-LCSSSPTGGFVDASVLVRQISLSPSSGGHFVFQDGSGLTQIA 202
G + A GP G SS P G +D + +L + G F A
Sbjct: 126 GSEHASSPVPASGPSSGPQMSSGPGGAPLDGA---DPQALGQQNRGPTPFNQNQLHQLRA 182
Query: 203 QGAQVQLQHPGTPI------TVRERRP-----SQPHTQSGGTIHHLGP---QSPAAAGGA 248
Q ++ G P+ V+ +RP Q T ++ GP P G
Sbjct: 183 QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP 242
Query: 249 GLQP--LASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGVLLPGAG 306
G P + P + N+PP S + + Q GPP P P G P A
Sbjct: 243 GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP--GGPPKPWPEG---------PMAN 291
Query: 307 GAAGFGMTS---PPPPT---SPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE 360
AA PP PT SP+ AVPP S + + G P + +
Sbjct: 292 AAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSR 351
Query: 361 MAQMRK 366
+ ++K
Sbjct: 352 ITPIQK 357
Score = 33.9 bits (76), Expect = 2.6
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 2506 PPPPQPQPPP-PPQQPP--PPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
PP P +P P PP PP P+ PQ PA P + P Q Q++ P+Q P
Sbjct: 304 PPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPM--VPLHQKQSRITPIQKPRGL 361
Query: 2563 QP 2564
P
Sbjct: 362 DP 363
Score = 33.1 bits (74), Expect = 4.4
Identities = 79/349 (22%), Positives = 106/349 (30%), Gaps = 65/349 (18%)
Query: 2507 PPPQPQPPPPPQQPPPPLPQPQAAGSQ--PPAGPP-AVQPQPQPQPQTQPQP-VQAPAKA 2562
P P P P P P P P P +A S P GPP A P P P PQ + K
Sbjct: 16 PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKP 75
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVA 2622
++ G + + G M +G +G G P + ++ SP+
Sbjct: 76 MESMHEKGMS---DDPRYNQMKGMGMRSGGHAG-------MGPPPSPMDQHSQGYPSPL- 124
Query: 2623 PGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNL 2682
GGS H P PA+ M++ G + A+ N
Sbjct: 125 -------GGSE-----HASSP-----VPASGPSSGPQMSSGPGGAPLDGADPQALGQQNR 167
Query: 2683 TPV---QTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQ 2739
P Q L Q+ A+ L R Q Q Q ++
Sbjct: 168 GPTPFNQNQLHQLRAQIM--------------AYKMLARGQPLPDHLQMAVQGKRPMPGM 213
Query: 2740 QQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPP---- 2795
QQQ + S G P G P + MPP P
Sbjct: 214 QQQMPTLPPPSVSATG----PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Query: 2796 ---PPQAQSAPPQ-----PTAQVQVQTSQPPQQQSPQLTTVTAPRPGAL 2836
P Q PP+ P A TS P + PQ T +P P A+
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 32.7 bits (73), Expect = 5.8
Identities = 46/205 (22%), Positives = 63/205 (30%), Gaps = 23/205 (11%)
Query: 549 LHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSS 608
+ TP P L G P P S P P P P PPS+
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPG--------PSPGSAHSMMGPSPGPPSA 52
Query: 609 QLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSS 668
PIP P G Q Q+ + + + DP + + S
Sbjct: 53 GHPIPTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGH 103
Query: 669 LAPVSGSGPGPSP--ARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQNATSS 726
+G GP PSP S P + A SPV + P + P +
Sbjct: 104 ----AGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
Query: 727 QDSSQDTLTEQITLENQVHQRIAEL 751
Q Q +NQ+HQ A++
Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQI 184
Score = 32.0 bits (71), Expect = 9.8
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 2498 AQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPP-AVQPQPQPQPQTQPQPV 2556
A PA + PPQ Q P P QP P +P Q P P + P Q +
Sbjct: 317 AVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQA 376
Query: 2557 QAPAKAQPAITTGGSAAVLAGTIKTSVT 2584
+ + Q GS LAG ++T T
Sbjct: 377 RIAHRIQELENLPGS---LAGDLRTKAT 401
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 213 bits (541), Expect = 3e-54
Identities = 234/941 (24%), Positives = 393/941 (41%), Gaps = 136/941 (14%)
Query: 495 QHPGADAGVPLQQLMPTAQG--GMPPTP----QAAQLAGQRQSQQQYDPSTGPP--VQNA 546
Q G PL P A G PTP Q QL Q + + P +Q A
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203
Query: 547 ASLHTPLP----QLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPI 602
P+P Q+P LPP V P A P PN+P
Sbjct: 204 VQGKRPMPGMQQQMP-TLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPP 262
Query: 603 PAPPSSQLPIPPSQPAQLALHVPTPGKV--QVQASQLSSLPQMVASTRLPVDPAPPCPRP 660
P P +PP P Q P P A+ +S PQ + + P+P P
Sbjct: 263 PGPSG----VPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Query: 661 LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATN-----KALSPV----------TSRT 705
P +S G PA P+++ S + L PV +R
Sbjct: 319 PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARI 378
Query: 706 PGVVASAPTKPQSPAQNATSS--------------------------QDSSQDTLTEQIT 739
+ P S A + + +D++ +T
Sbjct: 379 AHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKA 438
Query: 740 LENQVHQRIAELR-KAGLWSQRRLPKLQEAPRPKSHWDYLLEEMQWMATDFAQERRWKVA 798
+ Q + E R L Q+++ QE R + H +YL +Q A DF + R
Sbjct: 439 YKRSKRQSLREARITEKLEKQQKIE--QERKRRQKHQEYLNSILQ-HAKDFKEYHRSVTG 495
Query: 799 AAKKLVRTVVRHHEEKQLREERGKKE--EQSRLRRIAASTAREIECFWSNIEQVVEIKLR 856
+KL + V +H + RE++ + E E+ R+RR+ A + E + I+Q + +L
Sbjct: 496 KIQKLTKAVATYHANTE-REQKKENERIEKERMRRL---MAEDEEGYRKLIDQKKDKRLA 551
Query: 857 VELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDEVDDEE 916
L++ + NL ++ R+ K A Q + +K+ + + +
Sbjct: 552 YLLQQTDEYVANLTELVRQHK--------AAQVAKEKKKKKKKKKAENAEGQTPAIGPDG 603
Query: 917 ETIEE--EEANEGVVDHQTELSNLAKEAELP-------LLDLMKLYEGAFLPSSQWPRPK 967
E ++E + ++ V E + + P L++ YE A P+
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVA---------PR 654
Query: 968 PDGEDTSGEEDADDCPGDR-----------ESRKDLVLIDSLFIMDQFKAAERMNIGKPN 1016
D E++ EE+ ++ ++ E +K + DS D + +I +
Sbjct: 655 SDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDS----DDVSEVDARHIIENA 710
Query: 1017 AKDIADVTAVAEAILPKG-------SARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLY 1069
+D+ D V++A L +G + VT V + ++ G L+ YQ GL+WL LY
Sbjct: 711 KQDVDDEYGVSQA-LARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLY 769
Query: 1070 RKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGL 1129
NLNGILADE GLGKT+Q IA +L ++ GP L++V + W E +W P +
Sbjct: 770 NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV 829
Query: 1130 KILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKG 1189
+SY GS +A + F+V +T+Y + ++RWK +++DE R+K
Sbjct: 830 VKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN 888
Query: 1190 MTERHWEAVFT-LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLR 1242
+ + + T + +RLLL +PL N ELW +++FL+P I + + ++P
Sbjct: 889 HHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA 948
Query: 1243 APSEE---SQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY 1299
E+ +++ ++ RLH+V +PF+LRR K++VE QL +K E+V+KC +S Q+ LY
Sbjct: 949 MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY 1008
Query: 1300 -----EDVILQPGTQEALK-SGHFVNVLSILVRLQRICNHP 1334
+ V+L G+++ K G +++ +++L++ICNHP
Sbjct: 1009 RHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Score = 98.6 bits (244), Expect = 9e-20
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK E L +L KL++ +VL+ QM ++ I+E + + Y+R+D +E R L
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+++FN F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1979 IHIYRLVSGNSIEEKLL 1995
+ + RL + NS+EEK+L
Sbjct: 1199 VRVLRLCTVNSVEEKIL 1215
Score = 45.8 bits (107), Expect = 7e-04
Identities = 40/156 (25%), Positives = 57/156 (36%), Gaps = 31/156 (19%)
Query: 2447 GMNPFQKNPKH---ASVLAESGINYDKPLPP-IQVASLRAERIAKEKKALADQQKAQQPA 2502
G PF +N H A ++A + +PLP +Q+A + ++ + A
Sbjct: 168 GPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSA 227
Query: 2503 VAQPPPPQPQPPPPPQQPPPPLPQPQAAG--SQPPAGPPAVQP---------QPQPQPQ- 2550
P P P P P P PP +P G + PP GP V P P+P P+
Sbjct: 228 TGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
Query: 2551 ---------------TQPQPVQAPAKAQPAITTGGS 2571
PQP P+ A PA+ S
Sbjct: 288 PMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS 323
Score = 43.9 bits (102), Expect = 0.003
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQ----PQPQPQTQPQPVQAPAK 2561
PP P PP P QPP P+P G A P PQ PQP + P P P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 2562 AQPAI 2566
A P +
Sbjct: 322 ASPVM 326
Score = 42.7 bits (99), Expect = 0.006
Identities = 30/71 (42%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 2505 QPP--PPQPQPPPP------PQQPPPPLPQPQAAG---SQPPAGPPAVQPQPQPQPQTQP 2553
QPP PP+P P P P P L PQ G PPA PPA P PQ Q+
Sbjct: 275 QPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 2554 QPVQAPAKAQP 2564
QP Q PA P
Sbjct: 335 QPAQ-PAPMVP 344
Score = 40.4 bits (93), Expect = 0.028
Identities = 89/366 (24%), Positives = 124/366 (33%), Gaps = 57/366 (15%)
Query: 32 PNPPPSPAAPFAPSASPSAPQSPSYQIQQLMNRSPATGQNVNITLQSVGPVVGGNQQITL 91
P P PSP A PS PS + S +M SP + + + GP GG Q +
Sbjct: 18 PGPGPSPGAMLGPSPGPSPGSAHS-----MMGPSPGP-PSAGHPIPTQGP--GGYPQDNM 69
Query: 92 APLPLPSPTSPGFQFSAQPRRFE--------HGSPSYIQVTSPLSQQVQTQSPTQPSPGP 143
+ P + S PR + G SP+ Q S PSP
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ----HSQGYPSPLG 125
Query: 144 GQALQNVRAGAPGPGLG-LCSSSPTGGFVDASVLVRQISLSPSSGGHFVFQDGSGLTQIA 202
G + A GP G SS P G +D + +L + G F A
Sbjct: 126 GSEHASSPVPASGPSSGPQMSSGPGGAPLDGA---DPQALGQQNRGPTPFNQNQLHQLRA 182
Query: 203 QGAQVQLQHPGTPI------TVRERRP-----SQPHTQSGGTIHHLGP---QSPAAAGGA 248
Q ++ G P+ V+ +RP Q T ++ GP P G
Sbjct: 183 QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP 242
Query: 249 GLQP--LASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGVLLPGAG 306
G P + P + N+PP S + + Q GPP P P G P A
Sbjct: 243 GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP--GGPPKPWPEG---------PMAN 291
Query: 307 GAAGFGMTS---PPPPT---SPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE 360
AA PP PT SP+ AVPP S + + G P + +
Sbjct: 292 AAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSR 351
Query: 361 MAQMRK 366
+ ++K
Sbjct: 352 ITPIQK 357
Score = 33.9 bits (76), Expect = 2.6
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 2506 PPPPQPQPPP-PPQQPP--PPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
PP P +P P PP PP P+ PQ PA P + P Q Q++ P+Q P
Sbjct: 304 PPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPM--VPLHQKQSRITPIQKPRGL 361
Query: 2563 QP 2564
P
Sbjct: 362 DP 363
Score = 33.1 bits (74), Expect = 4.4
Identities = 79/349 (22%), Positives = 106/349 (30%), Gaps = 65/349 (18%)
Query: 2507 PPPQPQPPPPPQQPPPPLPQPQAAGSQ--PPAGPP-AVQPQPQPQPQTQPQP-VQAPAKA 2562
P P P P P P P P P +A S P GPP A P P P PQ + K
Sbjct: 16 PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKP 75
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVA 2622
++ G + + G M +G +G G P + ++ SP+
Sbjct: 76 MESMHEKGMS---DDPRYNQMKGMGMRSGGHAG-------MGPPPSPMDQHSQGYPSPL- 124
Query: 2623 PGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNL 2682
GGS H P PA+ M++ G + A+ N
Sbjct: 125 -------GGSE-----HASSP-----VPASGPSSGPQMSSGPGGAPLDGADPQALGQQNR 167
Query: 2683 TPV---QTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQ 2739
P Q L Q+ A+ L R Q Q Q ++
Sbjct: 168 GPTPFNQNQLHQLRAQIM--------------AYKMLARGQPLPDHLQMAVQGKRPMPGM 213
Query: 2740 QQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPP---- 2795
QQQ + S G P G P + MPP P
Sbjct: 214 QQQMPTLPPPSVSATG----PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Query: 2796 ---PPQAQSAPPQ-----PTAQVQVQTSQPPQQQSPQLTTVTAPRPGAL 2836
P Q PP+ P A TS P + PQ T +P P A+
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 32.7 bits (73), Expect = 5.8
Identities = 46/205 (22%), Positives = 63/205 (30%), Gaps = 23/205 (11%)
Query: 549 LHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSS 608
+ TP P L G P P S P P P P PPS+
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPG--------PSPGSAHSMMGPSPGPPSA 52
Query: 609 QLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSS 668
PIP P G Q Q+ + + + DP + + S
Sbjct: 53 GHPIPTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGH 103
Query: 669 LAPVSGSGPGPSP--ARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQNATSS 726
+G GP PSP S P + A SPV + P + P +
Sbjct: 104 ----AGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
Query: 727 QDSSQDTLTEQITLENQVHQRIAEL 751
Q Q +NQ+HQ A++
Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQI 184
Score = 32.0 bits (71), Expect = 9.8
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 2498 AQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPP-AVQPQPQPQPQTQPQPV 2556
A PA + PPQ Q P P QP P +P Q P P + P Q +
Sbjct: 317 AVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQA 376
Query: 2557 QAPAKAQPAITTGGSAAVLAGTIKTSVT 2584
+ + Q GS LAG ++T T
Sbjct: 377 RIAHRIQELENLPGS---LAGDLRTKAT 401
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 213 bits (541), Expect = 3e-54
Identities = 234/941 (24%), Positives = 393/941 (41%), Gaps = 136/941 (14%)
Query: 495 QHPGADAGVPLQQLMPTAQG--GMPPTP----QAAQLAGQRQSQQQYDPSTGPP--VQNA 546
Q G PL P A G PTP Q QL Q + + P +Q A
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203
Query: 547 ASLHTPLP----QLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPI 602
P+P Q+P LPP V P A P PN+P
Sbjct: 204 VQGKRPMPGMQQQMP-TLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPP 262
Query: 603 PAPPSSQLPIPPSQPAQLALHVPTPGKV--QVQASQLSSLPQMVASTRLPVDPAPPCPRP 660
P P +PP P Q P P A+ +S PQ + + P+P P
Sbjct: 263 PGPSG----VPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Query: 661 LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATN-----KALSPV----------TSRT 705
P +S G PA P+++ S + L PV +R
Sbjct: 319 PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARI 378
Query: 706 PGVVASAPTKPQSPAQNATSS--------------------------QDSSQDTLTEQIT 739
+ P S A + + +D++ +T
Sbjct: 379 AHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKA 438
Query: 740 LENQVHQRIAELR-KAGLWSQRRLPKLQEAPRPKSHWDYLLEEMQWMATDFAQERRWKVA 798
+ Q + E R L Q+++ QE R + H +YL +Q A DF + R
Sbjct: 439 YKRSKRQSLREARITEKLEKQQKIE--QERKRRQKHQEYLNSILQ-HAKDFKEYHRSVTG 495
Query: 799 AAKKLVRTVVRHHEEKQLREERGKKE--EQSRLRRIAASTAREIECFWSNIEQVVEIKLR 856
+KL + V +H + RE++ + E E+ R+RR+ A + E + I+Q + +L
Sbjct: 496 KIQKLTKAVATYHANTE-REQKKENERIEKERMRRL---MAEDEEGYRKLIDQKKDKRLA 551
Query: 857 VELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDEVDDEE 916
L++ + NL ++ R+ K A Q + +K+ + + +
Sbjct: 552 YLLQQTDEYVANLTELVRQHK--------AAQVAKEKKKKKKKKKAENAEGQTPAIGPDG 603
Query: 917 ETIEE--EEANEGVVDHQTELSNLAKEAELP-------LLDLMKLYEGAFLPSSQWPRPK 967
E ++E + ++ V E + + P L++ YE A P+
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVA---------PR 654
Query: 968 PDGEDTSGEEDADDCPGDR-----------ESRKDLVLIDSLFIMDQFKAAERMNIGKPN 1016
D E++ EE+ ++ ++ E +K + DS D + +I +
Sbjct: 655 SDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDS----DDVSEVDARHIIENA 710
Query: 1017 AKDIADVTAVAEAILPKG-------SARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLY 1069
+D+ D V++A L +G + VT V + ++ G L+ YQ GL+WL LY
Sbjct: 711 KQDVDDEYGVSQA-LARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLY 769
Query: 1070 RKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGL 1129
NLNGILADE GLGKT+Q IA +L ++ GP L++V + W E +W P +
Sbjct: 770 NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV 829
Query: 1130 KILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKG 1189
+SY GS +A + F+V +T+Y + ++RWK +++DE R+K
Sbjct: 830 VKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN 888
Query: 1190 MTERHWEAVFT-LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLR 1242
+ + + T + +RLLL +PL N ELW +++FL+P I + + ++P
Sbjct: 889 HHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA 948
Query: 1243 APSEE---SQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY 1299
E+ +++ ++ RLH+V +PF+LRR K++VE QL +K E+V+KC +S Q+ LY
Sbjct: 949 MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY 1008
Query: 1300 -----EDVILQPGTQEALK-SGHFVNVLSILVRLQRICNHP 1334
+ V+L G+++ K G +++ +++L++ICNHP
Sbjct: 1009 RHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Score = 98.6 bits (244), Expect = 9e-20
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK E L +L KL++ +VL+ QM ++ I+E + + Y+R+D +E R L
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+++FN F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1979 IHIYRLVSGNSIEEKLL 1995
+ + RL + NS+EEK+L
Sbjct: 1199 VRVLRLCTVNSVEEKIL 1215
Score = 45.8 bits (107), Expect = 7e-04
Identities = 40/156 (25%), Positives = 57/156 (36%), Gaps = 31/156 (19%)
Query: 2447 GMNPFQKNPKH---ASVLAESGINYDKPLPP-IQVASLRAERIAKEKKALADQQKAQQPA 2502
G PF +N H A ++A + +PLP +Q+A + ++ + A
Sbjct: 168 GPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSA 227
Query: 2503 VAQPPPPQPQPPPPPQQPPPPLPQPQAAG--SQPPAGPPAVQP---------QPQPQPQ- 2550
P P P P P P PP +P G + PP GP V P P+P P+
Sbjct: 228 TGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
Query: 2551 ---------------TQPQPVQAPAKAQPAITTGGS 2571
PQP P+ A PA+ S
Sbjct: 288 PMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS 323
Score = 43.9 bits (102), Expect = 0.003
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQ----PQPQPQTQPQPVQAPAK 2561
PP P PP P QPP P+P G A P PQ PQP + P P P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 2562 AQPAI 2566
A P +
Sbjct: 322 ASPVM 326
Score = 42.7 bits (99), Expect = 0.006
Identities = 30/71 (42%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 2505 QPP--PPQPQPPPP------PQQPPPPLPQPQAAG---SQPPAGPPAVQPQPQPQPQTQP 2553
QPP PP+P P P P P L PQ G PPA PPA P PQ Q+
Sbjct: 275 QPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 2554 QPVQAPAKAQP 2564
QP Q PA P
Sbjct: 335 QPAQ-PAPMVP 344
Score = 40.4 bits (93), Expect = 0.028
Identities = 89/366 (24%), Positives = 124/366 (33%), Gaps = 57/366 (15%)
Query: 32 PNPPPSPAAPFAPSASPSAPQSPSYQIQQLMNRSPATGQNVNITLQSVGPVVGGNQQITL 91
P P PSP A PS PS + S +M SP + + + GP GG Q +
Sbjct: 18 PGPGPSPGAMLGPSPGPSPGSAHS-----MMGPSPGP-PSAGHPIPTQGP--GGYPQDNM 69
Query: 92 APLPLPSPTSPGFQFSAQPRRFE--------HGSPSYIQVTSPLSQQVQTQSPTQPSPGP 143
+ P + S PR + G SP+ Q S PSP
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ----HSQGYPSPLG 125
Query: 144 GQALQNVRAGAPGPGLG-LCSSSPTGGFVDASVLVRQISLSPSSGGHFVFQDGSGLTQIA 202
G + A GP G SS P G +D + +L + G F A
Sbjct: 126 GSEHASSPVPASGPSSGPQMSSGPGGAPLDGA---DPQALGQQNRGPTPFNQNQLHQLRA 182
Query: 203 QGAQVQLQHPGTPI------TVRERRP-----SQPHTQSGGTIHHLGP---QSPAAAGGA 248
Q ++ G P+ V+ +RP Q T ++ GP P G
Sbjct: 183 QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP 242
Query: 249 GLQP--LASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGVLLPGAG 306
G P + P + N+PP S + + Q GPP P P G P A
Sbjct: 243 GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP--GGPPKPWPEG---------PMAN 291
Query: 307 GAAGFGMTS---PPPPT---SPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE 360
AA PP PT SP+ AVPP S + + G P + +
Sbjct: 292 AAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSR 351
Query: 361 MAQMRK 366
+ ++K
Sbjct: 352 ITPIQK 357
Score = 33.9 bits (76), Expect = 2.6
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 2506 PPPPQPQPPP-PPQQPP--PPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
PP P +P P PP PP P+ PQ PA P + P Q Q++ P+Q P
Sbjct: 304 PPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPM--VPLHQKQSRITPIQKPRGL 361
Query: 2563 QP 2564
P
Sbjct: 362 DP 363
Score = 33.1 bits (74), Expect = 4.4
Identities = 79/349 (22%), Positives = 106/349 (30%), Gaps = 65/349 (18%)
Query: 2507 PPPQPQPPPPPQQPPPPLPQPQAAGSQ--PPAGPP-AVQPQPQPQPQTQPQP-VQAPAKA 2562
P P P P P P P P P +A S P GPP A P P P PQ + K
Sbjct: 16 PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKP 75
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVA 2622
++ G + + G M +G +G G P + ++ SP+
Sbjct: 76 MESMHEKGMS---DDPRYNQMKGMGMRSGGHAG-------MGPPPSPMDQHSQGYPSPL- 124
Query: 2623 PGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNL 2682
GGS H P PA+ M++ G + A+ N
Sbjct: 125 -------GGSE-----HASSP-----VPASGPSSGPQMSSGPGGAPLDGADPQALGQQNR 167
Query: 2683 TPV---QTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQ 2739
P Q L Q+ A+ L R Q Q Q ++
Sbjct: 168 GPTPFNQNQLHQLRAQIM--------------AYKMLARGQPLPDHLQMAVQGKRPMPGM 213
Query: 2740 QQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPP---- 2795
QQQ + S G P G P + MPP P
Sbjct: 214 QQQMPTLPPPSVSATG----PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Query: 2796 ---PPQAQSAPPQ-----PTAQVQVQTSQPPQQQSPQLTTVTAPRPGAL 2836
P Q PP+ P A TS P + PQ T +P P A+
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 32.7 bits (73), Expect = 5.8
Identities = 46/205 (22%), Positives = 63/205 (30%), Gaps = 23/205 (11%)
Query: 549 LHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSS 608
+ TP P L G P P S P P P P PPS+
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPG--------PSPGSAHSMMGPSPGPPSA 52
Query: 609 QLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSS 668
PIP P G Q Q+ + + + DP + + S
Sbjct: 53 GHPIPTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGH 103
Query: 669 LAPVSGSGPGPSP--ARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQNATSS 726
+G GP PSP S P + A SPV + P + P +
Sbjct: 104 ----AGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
Query: 727 QDSSQDTLTEQITLENQVHQRIAEL 751
Q Q +NQ+HQ A++
Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQI 184
Score = 32.0 bits (71), Expect = 9.8
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 2498 AQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPP-AVQPQPQPQPQTQPQPV 2556
A PA + PPQ Q P P QP P +P Q P P + P Q +
Sbjct: 317 AVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQA 376
Query: 2557 QAPAKAQPAITTGGSAAVLAGTIKTSVT 2584
+ + Q GS LAG ++T T
Sbjct: 377 RIAHRIQELENLPGS---LAGDLRTKAT 401
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 213 bits (541), Expect = 3e-54
Identities = 234/941 (24%), Positives = 393/941 (41%), Gaps = 136/941 (14%)
Query: 495 QHPGADAGVPLQQLMPTAQG--GMPPTP----QAAQLAGQRQSQQQYDPSTGPP--VQNA 546
Q G PL P A G PTP Q QL Q + + P +Q A
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203
Query: 547 ASLHTPLP----QLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPI 602
P+P Q+P LPP V P A P PN+P
Sbjct: 204 VQGKRPMPGMQQQMP-TLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPP 262
Query: 603 PAPPSSQLPIPPSQPAQLALHVPTPGKV--QVQASQLSSLPQMVASTRLPVDPAPPCPRP 660
P P +PP P Q P P A+ +S PQ + + P+P P
Sbjct: 263 PGPSG----VPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Query: 661 LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATN-----KALSPV----------TSRT 705
P +S G PA P+++ S + L PV +R
Sbjct: 319 PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARI 378
Query: 706 PGVVASAPTKPQSPAQNATSS--------------------------QDSSQDTLTEQIT 739
+ P S A + + +D++ +T
Sbjct: 379 AHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKA 438
Query: 740 LENQVHQRIAELR-KAGLWSQRRLPKLQEAPRPKSHWDYLLEEMQWMATDFAQERRWKVA 798
+ Q + E R L Q+++ QE R + H +YL +Q A DF + R
Sbjct: 439 YKRSKRQSLREARITEKLEKQQKIE--QERKRRQKHQEYLNSILQ-HAKDFKEYHRSVTG 495
Query: 799 AAKKLVRTVVRHHEEKQLREERGKKE--EQSRLRRIAASTAREIECFWSNIEQVVEIKLR 856
+KL + V +H + RE++ + E E+ R+RR+ A + E + I+Q + +L
Sbjct: 496 KIQKLTKAVATYHANTE-REQKKENERIEKERMRRL---MAEDEEGYRKLIDQKKDKRLA 551
Query: 857 VELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDEVDDEE 916
L++ + NL ++ R+ K A Q + +K+ + + +
Sbjct: 552 YLLQQTDEYVANLTELVRQHK--------AAQVAKEKKKKKKKKKAENAEGQTPAIGPDG 603
Query: 917 ETIEE--EEANEGVVDHQTELSNLAKEAELP-------LLDLMKLYEGAFLPSSQWPRPK 967
E ++E + ++ V E + + P L++ YE A P+
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVA---------PR 654
Query: 968 PDGEDTSGEEDADDCPGDR-----------ESRKDLVLIDSLFIMDQFKAAERMNIGKPN 1016
D E++ EE+ ++ ++ E +K + DS D + +I +
Sbjct: 655 SDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDS----DDVSEVDARHIIENA 710
Query: 1017 AKDIADVTAVAEAILPKG-------SARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLY 1069
+D+ D V++A L +G + VT V + ++ G L+ YQ GL+WL LY
Sbjct: 711 KQDVDDEYGVSQA-LARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLY 769
Query: 1070 RKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGL 1129
NLNGILADE GLGKT+Q IA +L ++ GP L++V + W E +W P +
Sbjct: 770 NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV 829
Query: 1130 KILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKG 1189
+SY GS +A + F+V +T+Y + ++RWK +++DE R+K
Sbjct: 830 VKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN 888
Query: 1190 MTERHWEAVFT-LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLR 1242
+ + + T + +RLLL +PL N ELW +++FL+P I + + ++P
Sbjct: 889 HHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA 948
Query: 1243 APSEE---SQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY 1299
E+ +++ ++ RLH+V +PF+LRR K++VE QL +K E+V+KC +S Q+ LY
Sbjct: 949 MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY 1008
Query: 1300 -----EDVILQPGTQEALK-SGHFVNVLSILVRLQRICNHP 1334
+ V+L G+++ K G +++ +++L++ICNHP
Sbjct: 1009 RHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Score = 98.6 bits (244), Expect = 9e-20
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK E L +L KL++ +VL+ QM ++ I+E + + Y+R+D +E R L
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+++FN F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1979 IHIYRLVSGNSIEEKLL 1995
+ + RL + NS+EEK+L
Sbjct: 1199 VRVLRLCTVNSVEEKIL 1215
Score = 45.8 bits (107), Expect = 7e-04
Identities = 40/156 (25%), Positives = 57/156 (36%), Gaps = 31/156 (19%)
Query: 2447 GMNPFQKNPKH---ASVLAESGINYDKPLPP-IQVASLRAERIAKEKKALADQQKAQQPA 2502
G PF +N H A ++A + +PLP +Q+A + ++ + A
Sbjct: 168 GPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSA 227
Query: 2503 VAQPPPPQPQPPPPPQQPPPPLPQPQAAG--SQPPAGPPAVQP---------QPQPQPQ- 2550
P P P P P P PP +P G + PP GP V P P+P P+
Sbjct: 228 TGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
Query: 2551 ---------------TQPQPVQAPAKAQPAITTGGS 2571
PQP P+ A PA+ S
Sbjct: 288 PMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS 323
Score = 43.9 bits (102), Expect = 0.003
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQ----PQPQPQTQPQPVQAPAK 2561
PP P PP P QPP P+P G A P PQ PQP + P P P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 2562 AQPAI 2566
A P +
Sbjct: 322 ASPVM 326
Score = 42.7 bits (99), Expect = 0.006
Identities = 30/71 (42%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 2505 QPP--PPQPQPPPP------PQQPPPPLPQPQAAG---SQPPAGPPAVQPQPQPQPQTQP 2553
QPP PP+P P P P P L PQ G PPA PPA P PQ Q+
Sbjct: 275 QPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 2554 QPVQAPAKAQP 2564
QP Q PA P
Sbjct: 335 QPAQ-PAPMVP 344
Score = 40.4 bits (93), Expect = 0.028
Identities = 89/366 (24%), Positives = 124/366 (33%), Gaps = 57/366 (15%)
Query: 32 PNPPPSPAAPFAPSASPSAPQSPSYQIQQLMNRSPATGQNVNITLQSVGPVVGGNQQITL 91
P P PSP A PS PS + S +M SP + + + GP GG Q +
Sbjct: 18 PGPGPSPGAMLGPSPGPSPGSAHS-----MMGPSPGP-PSAGHPIPTQGP--GGYPQDNM 69
Query: 92 APLPLPSPTSPGFQFSAQPRRFE--------HGSPSYIQVTSPLSQQVQTQSPTQPSPGP 143
+ P + S PR + G SP+ Q S PSP
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ----HSQGYPSPLG 125
Query: 144 GQALQNVRAGAPGPGLG-LCSSSPTGGFVDASVLVRQISLSPSSGGHFVFQDGSGLTQIA 202
G + A GP G SS P G +D + +L + G F A
Sbjct: 126 GSEHASSPVPASGPSSGPQMSSGPGGAPLDGA---DPQALGQQNRGPTPFNQNQLHQLRA 182
Query: 203 QGAQVQLQHPGTPI------TVRERRP-----SQPHTQSGGTIHHLGP---QSPAAAGGA 248
Q ++ G P+ V+ +RP Q T ++ GP P G
Sbjct: 183 QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP 242
Query: 249 GLQP--LASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGVLLPGAG 306
G P + P + N+PP S + + Q GPP P P G P A
Sbjct: 243 GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP--GGPPKPWPEG---------PMAN 291
Query: 307 GAAGFGMTS---PPPPT---SPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE 360
AA PP PT SP+ AVPP S + + G P + +
Sbjct: 292 AAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSR 351
Query: 361 MAQMRK 366
+ ++K
Sbjct: 352 ITPIQK 357
Score = 33.9 bits (76), Expect = 2.6
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 2506 PPPPQPQPPP-PPQQPP--PPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
PP P +P P PP PP P+ PQ PA P + P Q Q++ P+Q P
Sbjct: 304 PPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPM--VPLHQKQSRITPIQKPRGL 361
Query: 2563 QP 2564
P
Sbjct: 362 DP 363
Score = 33.1 bits (74), Expect = 4.4
Identities = 79/349 (22%), Positives = 106/349 (30%), Gaps = 65/349 (18%)
Query: 2507 PPPQPQPPPPPQQPPPPLPQPQAAGSQ--PPAGPP-AVQPQPQPQPQTQPQP-VQAPAKA 2562
P P P P P P P P P +A S P GPP A P P P PQ + K
Sbjct: 16 PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKP 75
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVA 2622
++ G + + G M +G +G G P + ++ SP+
Sbjct: 76 MESMHEKGMS---DDPRYNQMKGMGMRSGGHAG-------MGPPPSPMDQHSQGYPSPL- 124
Query: 2623 PGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNL 2682
GGS H P PA+ M++ G + A+ N
Sbjct: 125 -------GGSE-----HASSP-----VPASGPSSGPQMSSGPGGAPLDGADPQALGQQNR 167
Query: 2683 TPV---QTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQ 2739
P Q L Q+ A+ L R Q Q Q ++
Sbjct: 168 GPTPFNQNQLHQLRAQIM--------------AYKMLARGQPLPDHLQMAVQGKRPMPGM 213
Query: 2740 QQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPP---- 2795
QQQ + S G P G P + MPP P
Sbjct: 214 QQQMPTLPPPSVSATG----PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Query: 2796 ---PPQAQSAPPQ-----PTAQVQVQTSQPPQQQSPQLTTVTAPRPGAL 2836
P Q PP+ P A TS P + PQ T +P P A+
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 32.7 bits (73), Expect = 5.8
Identities = 46/205 (22%), Positives = 63/205 (30%), Gaps = 23/205 (11%)
Query: 549 LHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSS 608
+ TP P L G P P S P P P P PPS+
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPG--------PSPGSAHSMMGPSPGPPSA 52
Query: 609 QLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSS 668
PIP P G Q Q+ + + + DP + + S
Sbjct: 53 GHPIPTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGH 103
Query: 669 LAPVSGSGPGPSP--ARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQNATSS 726
+G GP PSP S P + A SPV + P + P +
Sbjct: 104 ----AGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
Query: 727 QDSSQDTLTEQITLENQVHQRIAEL 751
Q Q +NQ+HQ A++
Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQI 184
Score = 32.0 bits (71), Expect = 9.8
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 2498 AQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPP-AVQPQPQPQPQTQPQPV 2556
A PA + PPQ Q P P QP P +P Q P P + P Q +
Sbjct: 317 AVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQA 376
Query: 2557 QAPAKAQPAITTGGSAAVLAGTIKTSVT 2584
+ + Q GS LAG ++T T
Sbjct: 377 RIAHRIQELENLPGS---LAGDLRTKAT 401
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 213 bits (541), Expect = 3e-54
Identities = 234/941 (24%), Positives = 393/941 (41%), Gaps = 136/941 (14%)
Query: 495 QHPGADAGVPLQQLMPTAQG--GMPPTP----QAAQLAGQRQSQQQYDPSTGPP--VQNA 546
Q G PL P A G PTP Q QL Q + + P +Q A
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203
Query: 547 ASLHTPLP----QLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPI 602
P+P Q+P LPP V P A P PN+P
Sbjct: 204 VQGKRPMPGMQQQMP-TLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPP 262
Query: 603 PAPPSSQLPIPPSQPAQLALHVPTPGKV--QVQASQLSSLPQMVASTRLPVDPAPPCPRP 660
P P +PP P Q P P A+ +S PQ + + P+P P
Sbjct: 263 PGPSG----VPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Query: 661 LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATN-----KALSPV----------TSRT 705
P +S G PA P+++ S + L PV +R
Sbjct: 319 PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARI 378
Query: 706 PGVVASAPTKPQSPAQNATSS--------------------------QDSSQDTLTEQIT 739
+ P S A + + +D++ +T
Sbjct: 379 AHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKA 438
Query: 740 LENQVHQRIAELR-KAGLWSQRRLPKLQEAPRPKSHWDYLLEEMQWMATDFAQERRWKVA 798
+ Q + E R L Q+++ QE R + H +YL +Q A DF + R
Sbjct: 439 YKRSKRQSLREARITEKLEKQQKIE--QERKRRQKHQEYLNSILQ-HAKDFKEYHRSVTG 495
Query: 799 AAKKLVRTVVRHHEEKQLREERGKKE--EQSRLRRIAASTAREIECFWSNIEQVVEIKLR 856
+KL + V +H + RE++ + E E+ R+RR+ A + E + I+Q + +L
Sbjct: 496 KIQKLTKAVATYHANTE-REQKKENERIEKERMRRL---MAEDEEGYRKLIDQKKDKRLA 551
Query: 857 VELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDEVDDEE 916
L++ + NL ++ R+ K A Q + +K+ + + +
Sbjct: 552 YLLQQTDEYVANLTELVRQHK--------AAQVAKEKKKKKKKKKAENAEGQTPAIGPDG 603
Query: 917 ETIEE--EEANEGVVDHQTELSNLAKEAELP-------LLDLMKLYEGAFLPSSQWPRPK 967
E ++E + ++ V E + + P L++ YE A P+
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVA---------PR 654
Query: 968 PDGEDTSGEEDADDCPGDR-----------ESRKDLVLIDSLFIMDQFKAAERMNIGKPN 1016
D E++ EE+ ++ ++ E +K + DS D + +I +
Sbjct: 655 SDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDS----DDVSEVDARHIIENA 710
Query: 1017 AKDIADVTAVAEAILPKG-------SARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLY 1069
+D+ D V++A L +G + VT V + ++ G L+ YQ GL+WL LY
Sbjct: 711 KQDVDDEYGVSQA-LARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLY 769
Query: 1070 RKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGL 1129
NLNGILADE GLGKT+Q IA +L ++ GP L++V + W E +W P +
Sbjct: 770 NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV 829
Query: 1130 KILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKG 1189
+SY GS +A + F+V +T+Y + ++RWK +++DE R+K
Sbjct: 830 VKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN 888
Query: 1190 MTERHWEAVFT-LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLR 1242
+ + + T + +RLLL +PL N ELW +++FL+P I + + ++P
Sbjct: 889 HHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA 948
Query: 1243 APSEE---SQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY 1299
E+ +++ ++ RLH+V +PF+LRR K++VE QL +K E+V+KC +S Q+ LY
Sbjct: 949 MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY 1008
Query: 1300 -----EDVILQPGTQEALK-SGHFVNVLSILVRLQRICNHP 1334
+ V+L G+++ K G +++ +++L++ICNHP
Sbjct: 1009 RHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Score = 98.6 bits (244), Expect = 9e-20
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK E L +L KL++ +VL+ QM ++ I+E + + Y+R+D +E R L
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+++FN F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1979 IHIYRLVSGNSIEEKLL 1995
+ + RL + NS+EEK+L
Sbjct: 1199 VRVLRLCTVNSVEEKIL 1215
Score = 45.8 bits (107), Expect = 7e-04
Identities = 40/156 (25%), Positives = 57/156 (36%), Gaps = 31/156 (19%)
Query: 2447 GMNPFQKNPKH---ASVLAESGINYDKPLPP-IQVASLRAERIAKEKKALADQQKAQQPA 2502
G PF +N H A ++A + +PLP +Q+A + ++ + A
Sbjct: 168 GPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSA 227
Query: 2503 VAQPPPPQPQPPPPPQQPPPPLPQPQAAG--SQPPAGPPAVQP---------QPQPQPQ- 2550
P P P P P P PP +P G + PP GP V P P+P P+
Sbjct: 228 TGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
Query: 2551 ---------------TQPQPVQAPAKAQPAITTGGS 2571
PQP P+ A PA+ S
Sbjct: 288 PMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS 323
Score = 43.9 bits (102), Expect = 0.003
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQ----PQPQPQTQPQPVQAPAK 2561
PP P PP P QPP P+P G A P PQ PQP + P P P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 2562 AQPAI 2566
A P +
Sbjct: 322 ASPVM 326
Score = 42.7 bits (99), Expect = 0.006
Identities = 30/71 (42%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 2505 QPP--PPQPQPPPP------PQQPPPPLPQPQAAG---SQPPAGPPAVQPQPQPQPQTQP 2553
QPP PP+P P P P P L PQ G PPA PPA P PQ Q+
Sbjct: 275 QPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 2554 QPVQAPAKAQP 2564
QP Q PA P
Sbjct: 335 QPAQ-PAPMVP 344
Score = 40.4 bits (93), Expect = 0.028
Identities = 89/366 (24%), Positives = 124/366 (33%), Gaps = 57/366 (15%)
Query: 32 PNPPPSPAAPFAPSASPSAPQSPSYQIQQLMNRSPATGQNVNITLQSVGPVVGGNQQITL 91
P P PSP A PS PS + S +M SP + + + GP GG Q +
Sbjct: 18 PGPGPSPGAMLGPSPGPSPGSAHS-----MMGPSPGP-PSAGHPIPTQGP--GGYPQDNM 69
Query: 92 APLPLPSPTSPGFQFSAQPRRFE--------HGSPSYIQVTSPLSQQVQTQSPTQPSPGP 143
+ P + S PR + G SP+ Q S PSP
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ----HSQGYPSPLG 125
Query: 144 GQALQNVRAGAPGPGLG-LCSSSPTGGFVDASVLVRQISLSPSSGGHFVFQDGSGLTQIA 202
G + A GP G SS P G +D + +L + G F A
Sbjct: 126 GSEHASSPVPASGPSSGPQMSSGPGGAPLDGA---DPQALGQQNRGPTPFNQNQLHQLRA 182
Query: 203 QGAQVQLQHPGTPI------TVRERRP-----SQPHTQSGGTIHHLGP---QSPAAAGGA 248
Q ++ G P+ V+ +RP Q T ++ GP P G
Sbjct: 183 QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP 242
Query: 249 GLQP--LASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGVLLPGAG 306
G P + P + N+PP S + + Q GPP P P G P A
Sbjct: 243 GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP--GGPPKPWPEG---------PMAN 291
Query: 307 GAAGFGMTS---PPPPT---SPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE 360
AA PP PT SP+ AVPP S + + G P + +
Sbjct: 292 AAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSR 351
Query: 361 MAQMRK 366
+ ++K
Sbjct: 352 ITPIQK 357
Score = 33.9 bits (76), Expect = 2.6
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 2506 PPPPQPQPPP-PPQQPP--PPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
PP P +P P PP PP P+ PQ PA P + P Q Q++ P+Q P
Sbjct: 304 PPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPM--VPLHQKQSRITPIQKPRGL 361
Query: 2563 QP 2564
P
Sbjct: 362 DP 363
Score = 33.1 bits (74), Expect = 4.4
Identities = 79/349 (22%), Positives = 106/349 (30%), Gaps = 65/349 (18%)
Query: 2507 PPPQPQPPPPPQQPPPPLPQPQAAGSQ--PPAGPP-AVQPQPQPQPQTQPQP-VQAPAKA 2562
P P P P P P P P P +A S P GPP A P P P PQ + K
Sbjct: 16 PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKP 75
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVA 2622
++ G + + G M +G +G G P + ++ SP+
Sbjct: 76 MESMHEKGMS---DDPRYNQMKGMGMRSGGHAG-------MGPPPSPMDQHSQGYPSPL- 124
Query: 2623 PGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNL 2682
GGS H P PA+ M++ G + A+ N
Sbjct: 125 -------GGSE-----HASSP-----VPASGPSSGPQMSSGPGGAPLDGADPQALGQQNR 167
Query: 2683 TPV---QTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQ 2739
P Q L Q+ A+ L R Q Q Q ++
Sbjct: 168 GPTPFNQNQLHQLRAQIM--------------AYKMLARGQPLPDHLQMAVQGKRPMPGM 213
Query: 2740 QQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPP---- 2795
QQQ + S G P G P + MPP P
Sbjct: 214 QQQMPTLPPPSVSATG----PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Query: 2796 ---PPQAQSAPPQ-----PTAQVQVQTSQPPQQQSPQLTTVTAPRPGAL 2836
P Q PP+ P A TS P + PQ T +P P A+
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 32.7 bits (73), Expect = 5.8
Identities = 46/205 (22%), Positives = 63/205 (30%), Gaps = 23/205 (11%)
Query: 549 LHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSS 608
+ TP P L G P P S P P P P PPS+
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPG--------PSPGSAHSMMGPSPGPPSA 52
Query: 609 QLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSS 668
PIP P G Q Q+ + + + DP + + S
Sbjct: 53 GHPIPTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGH 103
Query: 669 LAPVSGSGPGPSP--ARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQNATSS 726
+G GP PSP S P + A SPV + P + P +
Sbjct: 104 ----AGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
Query: 727 QDSSQDTLTEQITLENQVHQRIAEL 751
Q Q +NQ+HQ A++
Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQI 184
Score = 32.0 bits (71), Expect = 9.8
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 2498 AQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPP-AVQPQPQPQPQTQPQPV 2556
A PA + PPQ Q P P QP P +P Q P P + P Q +
Sbjct: 317 AVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQA 376
Query: 2557 QAPAKAQPAITTGGSAAVLAGTIKTSVT 2584
+ + Q GS LAG ++T T
Sbjct: 377 RIAHRIQELENLPGS---LAGDLRTKAT 401
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 213 bits (541), Expect = 3e-54
Identities = 234/941 (24%), Positives = 393/941 (41%), Gaps = 136/941 (14%)
Query: 495 QHPGADAGVPLQQLMPTAQG--GMPPTP----QAAQLAGQRQSQQQYDPSTGPP--VQNA 546
Q G PL P A G PTP Q QL Q + + P +Q A
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203
Query: 547 ASLHTPLP----QLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPI 602
P+P Q+P LPP V P A P PN+P
Sbjct: 204 VQGKRPMPGMQQQMP-TLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPP 262
Query: 603 PAPPSSQLPIPPSQPAQLALHVPTPGKV--QVQASQLSSLPQMVASTRLPVDPAPPCPRP 660
P P +PP P Q P P A+ +S PQ + + P+P P
Sbjct: 263 PGPSG----VPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Query: 661 LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATN-----KALSPV----------TSRT 705
P +S G PA P+++ S + L PV +R
Sbjct: 319 PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARI 378
Query: 706 PGVVASAPTKPQSPAQNATSS--------------------------QDSSQDTLTEQIT 739
+ P S A + + +D++ +T
Sbjct: 379 AHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKA 438
Query: 740 LENQVHQRIAELR-KAGLWSQRRLPKLQEAPRPKSHWDYLLEEMQWMATDFAQERRWKVA 798
+ Q + E R L Q+++ QE R + H +YL +Q A DF + R
Sbjct: 439 YKRSKRQSLREARITEKLEKQQKIE--QERKRRQKHQEYLNSILQ-HAKDFKEYHRSVTG 495
Query: 799 AAKKLVRTVVRHHEEKQLREERGKKE--EQSRLRRIAASTAREIECFWSNIEQVVEIKLR 856
+KL + V +H + RE++ + E E+ R+RR+ A + E + I+Q + +L
Sbjct: 496 KIQKLTKAVATYHANTE-REQKKENERIEKERMRRL---MAEDEEGYRKLIDQKKDKRLA 551
Query: 857 VELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDEVDDEE 916
L++ + NL ++ R+ K A Q + +K+ + + +
Sbjct: 552 YLLQQTDEYVANLTELVRQHK--------AAQVAKEKKKKKKKKKAENAEGQTPAIGPDG 603
Query: 917 ETIEE--EEANEGVVDHQTELSNLAKEAELP-------LLDLMKLYEGAFLPSSQWPRPK 967
E ++E + ++ V E + + P L++ YE A P+
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVA---------PR 654
Query: 968 PDGEDTSGEEDADDCPGDR-----------ESRKDLVLIDSLFIMDQFKAAERMNIGKPN 1016
D E++ EE+ ++ ++ E +K + DS D + +I +
Sbjct: 655 SDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDS----DDVSEVDARHIIENA 710
Query: 1017 AKDIADVTAVAEAILPKG-------SARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLY 1069
+D+ D V++A L +G + VT V + ++ G L+ YQ GL+WL LY
Sbjct: 711 KQDVDDEYGVSQA-LARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLY 769
Query: 1070 RKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGL 1129
NLNGILADE GLGKT+Q IA +L ++ GP L++V + W E +W P +
Sbjct: 770 NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV 829
Query: 1130 KILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKG 1189
+SY GS +A + F+V +T+Y + ++RWK +++DE R+K
Sbjct: 830 VKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN 888
Query: 1190 MTERHWEAVFT-LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLR 1242
+ + + T + +RLLL +PL N ELW +++FL+P I + + ++P
Sbjct: 889 HHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA 948
Query: 1243 APSEE---SQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY 1299
E+ +++ ++ RLH+V +PF+LRR K++VE QL +K E+V+KC +S Q+ LY
Sbjct: 949 MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY 1008
Query: 1300 -----EDVILQPGTQEALK-SGHFVNVLSILVRLQRICNHP 1334
+ V+L G+++ K G +++ +++L++ICNHP
Sbjct: 1009 RHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Score = 98.6 bits (244), Expect = 9e-20
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK E L +L KL++ +VL+ QM ++ I+E + + Y+R+D +E R L
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+++FN F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1979 IHIYRLVSGNSIEEKLL 1995
+ + RL + NS+EEK+L
Sbjct: 1199 VRVLRLCTVNSVEEKIL 1215
Score = 45.8 bits (107), Expect = 7e-04
Identities = 40/156 (25%), Positives = 57/156 (36%), Gaps = 31/156 (19%)
Query: 2447 GMNPFQKNPKH---ASVLAESGINYDKPLPP-IQVASLRAERIAKEKKALADQQKAQQPA 2502
G PF +N H A ++A + +PLP +Q+A + ++ + A
Sbjct: 168 GPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSA 227
Query: 2503 VAQPPPPQPQPPPPPQQPPPPLPQPQAAG--SQPPAGPPAVQP---------QPQPQPQ- 2550
P P P P P P PP +P G + PP GP V P P+P P+
Sbjct: 228 TGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
Query: 2551 ---------------TQPQPVQAPAKAQPAITTGGS 2571
PQP P+ A PA+ S
Sbjct: 288 PMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS 323
Score = 43.9 bits (102), Expect = 0.003
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQ----PQPQPQTQPQPVQAPAK 2561
PP P PP P QPP P+P G A P PQ PQP + P P P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 2562 AQPAI 2566
A P +
Sbjct: 322 ASPVM 326
Score = 42.7 bits (99), Expect = 0.006
Identities = 30/71 (42%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 2505 QPP--PPQPQPPPP------PQQPPPPLPQPQAAG---SQPPAGPPAVQPQPQPQPQTQP 2553
QPP PP+P P P P P L PQ G PPA PPA P PQ Q+
Sbjct: 275 QPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 2554 QPVQAPAKAQP 2564
QP Q PA P
Sbjct: 335 QPAQ-PAPMVP 344
Score = 40.4 bits (93), Expect = 0.028
Identities = 89/366 (24%), Positives = 124/366 (33%), Gaps = 57/366 (15%)
Query: 32 PNPPPSPAAPFAPSASPSAPQSPSYQIQQLMNRSPATGQNVNITLQSVGPVVGGNQQITL 91
P P PSP A PS PS + S +M SP + + + GP GG Q +
Sbjct: 18 PGPGPSPGAMLGPSPGPSPGSAHS-----MMGPSPGP-PSAGHPIPTQGP--GGYPQDNM 69
Query: 92 APLPLPSPTSPGFQFSAQPRRFE--------HGSPSYIQVTSPLSQQVQTQSPTQPSPGP 143
+ P + S PR + G SP+ Q S PSP
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ----HSQGYPSPLG 125
Query: 144 GQALQNVRAGAPGPGLG-LCSSSPTGGFVDASVLVRQISLSPSSGGHFVFQDGSGLTQIA 202
G + A GP G SS P G +D + +L + G F A
Sbjct: 126 GSEHASSPVPASGPSSGPQMSSGPGGAPLDGA---DPQALGQQNRGPTPFNQNQLHQLRA 182
Query: 203 QGAQVQLQHPGTPI------TVRERRP-----SQPHTQSGGTIHHLGP---QSPAAAGGA 248
Q ++ G P+ V+ +RP Q T ++ GP P G
Sbjct: 183 QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP 242
Query: 249 GLQP--LASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGVLLPGAG 306
G P + P + N+PP S + + Q GPP P P G P A
Sbjct: 243 GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP--GGPPKPWPEG---------PMAN 291
Query: 307 GAAGFGMTS---PPPPT---SPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE 360
AA PP PT SP+ AVPP S + + G P + +
Sbjct: 292 AAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSR 351
Query: 361 MAQMRK 366
+ ++K
Sbjct: 352 ITPIQK 357
Score = 33.9 bits (76), Expect = 2.6
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 2506 PPPPQPQPPP-PPQQPP--PPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
PP P +P P PP PP P+ PQ PA P + P Q Q++ P+Q P
Sbjct: 304 PPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPM--VPLHQKQSRITPIQKPRGL 361
Query: 2563 QP 2564
P
Sbjct: 362 DP 363
Score = 33.1 bits (74), Expect = 4.4
Identities = 79/349 (22%), Positives = 106/349 (30%), Gaps = 65/349 (18%)
Query: 2507 PPPQPQPPPPPQQPPPPLPQPQAAGSQ--PPAGPP-AVQPQPQPQPQTQPQP-VQAPAKA 2562
P P P P P P P P P +A S P GPP A P P P PQ + K
Sbjct: 16 PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKP 75
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVA 2622
++ G + + G M +G +G G P + ++ SP+
Sbjct: 76 MESMHEKGMS---DDPRYNQMKGMGMRSGGHAG-------MGPPPSPMDQHSQGYPSPL- 124
Query: 2623 PGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNL 2682
GGS H P PA+ M++ G + A+ N
Sbjct: 125 -------GGSE-----HASSP-----VPASGPSSGPQMSSGPGGAPLDGADPQALGQQNR 167
Query: 2683 TPV---QTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQ 2739
P Q L Q+ A+ L R Q Q Q ++
Sbjct: 168 GPTPFNQNQLHQLRAQIM--------------AYKMLARGQPLPDHLQMAVQGKRPMPGM 213
Query: 2740 QQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPP---- 2795
QQQ + S G P G P + MPP P
Sbjct: 214 QQQMPTLPPPSVSATG----PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Query: 2796 ---PPQAQSAPPQ-----PTAQVQVQTSQPPQQQSPQLTTVTAPRPGAL 2836
P Q PP+ P A TS P + PQ T +P P A+
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 32.7 bits (73), Expect = 5.8
Identities = 46/205 (22%), Positives = 63/205 (30%), Gaps = 23/205 (11%)
Query: 549 LHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSS 608
+ TP P L G P P S P P P P PPS+
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPG--------PSPGSAHSMMGPSPGPPSA 52
Query: 609 QLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSS 668
PIP P G Q Q+ + + + DP + + S
Sbjct: 53 GHPIPTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGH 103
Query: 669 LAPVSGSGPGPSP--ARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQNATSS 726
+G GP PSP S P + A SPV + P + P +
Sbjct: 104 ----AGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
Query: 727 QDSSQDTLTEQITLENQVHQRIAEL 751
Q Q +NQ+HQ A++
Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQI 184
Score = 32.0 bits (71), Expect = 9.8
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 2498 AQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPP-AVQPQPQPQPQTQPQPV 2556
A PA + PPQ Q P P QP P +P Q P P + P Q +
Sbjct: 317 AVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQA 376
Query: 2557 QAPAKAQPAITTGGSAAVLAGTIKTSVT 2584
+ + Q GS LAG ++T T
Sbjct: 377 RIAHRIQELENLPGS---LAGDLRTKAT 401
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 213 bits (541), Expect = 3e-54
Identities = 234/941 (24%), Positives = 393/941 (41%), Gaps = 136/941 (14%)
Query: 495 QHPGADAGVPLQQLMPTAQG--GMPPTP----QAAQLAGQRQSQQQYDPSTGPP--VQNA 546
Q G PL P A G PTP Q QL Q + + P +Q A
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMA 203
Query: 547 ASLHTPLP----QLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPI 602
P+P Q+P LPP V P A P PN+P
Sbjct: 204 VQGKRPMPGMQQQMP-TLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPP 262
Query: 603 PAPPSSQLPIPPSQPAQLALHVPTPGKV--QVQASQLSSLPQMVASTRLPVDPAPPCPRP 660
P P +PP P Q P P A+ +S PQ + + P+P P
Sbjct: 263 PGPSG----VPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Query: 661 LPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATN-----KALSPV----------TSRT 705
P +S G PA P+++ S + L PV +R
Sbjct: 319 PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARI 378
Query: 706 PGVVASAPTKPQSPAQNATSS--------------------------QDSSQDTLTEQIT 739
+ P S A + + +D++ +T
Sbjct: 379 AHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKA 438
Query: 740 LENQVHQRIAELR-KAGLWSQRRLPKLQEAPRPKSHWDYLLEEMQWMATDFAQERRWKVA 798
+ Q + E R L Q+++ QE R + H +YL +Q A DF + R
Sbjct: 439 YKRSKRQSLREARITEKLEKQQKIE--QERKRRQKHQEYLNSILQ-HAKDFKEYHRSVTG 495
Query: 799 AAKKLVRTVVRHHEEKQLREERGKKE--EQSRLRRIAASTAREIECFWSNIEQVVEIKLR 856
+KL + V +H + RE++ + E E+ R+RR+ A + E + I+Q + +L
Sbjct: 496 KIQKLTKAVATYHANTE-REQKKENERIEKERMRRL---MAEDEEGYRKLIDQKKDKRLA 551
Query: 857 VELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDEVDDEE 916
L++ + NL ++ R+ K A Q + +K+ + + +
Sbjct: 552 YLLQQTDEYVANLTELVRQHK--------AAQVAKEKKKKKKKKKAENAEGQTPAIGPDG 603
Query: 917 ETIEE--EEANEGVVDHQTELSNLAKEAELP-------LLDLMKLYEGAFLPSSQWPRPK 967
E ++E + ++ V E + + P L++ YE A P+
Sbjct: 604 EPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVA---------PR 654
Query: 968 PDGEDTSGEEDADDCPGDR-----------ESRKDLVLIDSLFIMDQFKAAERMNIGKPN 1016
D E++ EE+ ++ ++ E +K + DS D + +I +
Sbjct: 655 SDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDS----DDVSEVDARHIIENA 710
Query: 1017 AKDIADVTAVAEAILPKG-------SARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLY 1069
+D+ D V++A L +G + VT V + ++ G L+ YQ GL+WL LY
Sbjct: 711 KQDVDDEYGVSQA-LARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLY 769
Query: 1070 RKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGL 1129
NLNGILADE GLGKT+Q IA +L ++ GP L++V + W E +W P +
Sbjct: 770 NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV 829
Query: 1130 KILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKG 1189
+SY GS +A + F+V +T+Y + ++RWK +++DE R+K
Sbjct: 830 VKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN 888
Query: 1190 MTERHWEAVFT-LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLR 1242
+ + + T + +RLLL +PL N ELW +++FL+P I + + ++P
Sbjct: 889 HHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA 948
Query: 1243 APSEE---SQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY 1299
E+ +++ ++ RLH+V +PF+LRR K++VE QL +K E+V+KC +S Q+ LY
Sbjct: 949 MTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY 1008
Query: 1300 -----EDVILQPGTQEALK-SGHFVNVLSILVRLQRICNHP 1334
+ V+L G+++ K G +++ +++L++ICNHP
Sbjct: 1009 RHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP 1049
Score = 98.6 bits (244), Expect = 9e-20
Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK E L +L KL++ +VL+ QM ++ I+E + + Y+R+D +E R L
Sbjct: 1079 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1138
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+++FN F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1139 LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 1979 IHIYRLVSGNSIEEKLL 1995
+ + RL + NS+EEK+L
Sbjct: 1199 VRVLRLCTVNSVEEKIL 1215
Score = 45.8 bits (107), Expect = 7e-04
Identities = 40/156 (25%), Positives = 57/156 (36%), Gaps = 31/156 (19%)
Query: 2447 GMNPFQKNPKH---ASVLAESGINYDKPLPP-IQVASLRAERIAKEKKALADQQKAQQPA 2502
G PF +N H A ++A + +PLP +Q+A + ++ + A
Sbjct: 168 GPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSA 227
Query: 2503 VAQPPPPQPQPPPPPQQPPPPLPQPQAAG--SQPPAGPPAVQP---------QPQPQPQ- 2550
P P P P P P PP +P G + PP GP V P P+P P+
Sbjct: 228 TGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG 287
Query: 2551 ---------------TQPQPVQAPAKAQPAITTGGS 2571
PQP P+ A PA+ S
Sbjct: 288 PMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAAS 323
Score = 43.9 bits (102), Expect = 0.003
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQ----PQPQPQTQPQPVQAPAK 2561
PP P PP P QPP P+P G A P PQ PQP + P P P
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPA 321
Query: 2562 AQPAI 2566
A P +
Sbjct: 322 ASPVM 326
Score = 42.7 bits (99), Expect = 0.006
Identities = 30/71 (42%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 2505 QPP--PPQPQPPPP------PQQPPPPLPQPQAAG---SQPPAGPPAVQPQPQPQPQTQP 2553
QPP PP+P P P P P L PQ G PPA PPA P PQ Q+
Sbjct: 275 QPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 2554 QPVQAPAKAQP 2564
QP Q PA P
Sbjct: 335 QPAQ-PAPMVP 344
Score = 40.4 bits (93), Expect = 0.028
Identities = 89/366 (24%), Positives = 124/366 (33%), Gaps = 57/366 (15%)
Query: 32 PNPPPSPAAPFAPSASPSAPQSPSYQIQQLMNRSPATGQNVNITLQSVGPVVGGNQQITL 91
P P PSP A PS PS + S +M SP + + + GP GG Q +
Sbjct: 18 PGPGPSPGAMLGPSPGPSPGSAHS-----MMGPSPGP-PSAGHPIPTQGP--GGYPQDNM 69
Query: 92 APLPLPSPTSPGFQFSAQPRRFE--------HGSPSYIQVTSPLSQQVQTQSPTQPSPGP 143
+ P + S PR + G SP+ Q S PSP
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQ----HSQGYPSPLG 125
Query: 144 GQALQNVRAGAPGPGLG-LCSSSPTGGFVDASVLVRQISLSPSSGGHFVFQDGSGLTQIA 202
G + A GP G SS P G +D + +L + G F A
Sbjct: 126 GSEHASSPVPASGPSSGPQMSSGPGGAPLDGA---DPQALGQQNRGPTPFNQNQLHQLRA 182
Query: 203 QGAQVQLQHPGTPI------TVRERRP-----SQPHTQSGGTIHHLGP---QSPAAAGGA 248
Q ++ G P+ V+ +RP Q T ++ GP P G
Sbjct: 183 QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGP 242
Query: 249 GLQP--LASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPRPLGFERTPGVLLPGAG 306
G P + P + N+PP S + + Q GPP P P G P A
Sbjct: 243 GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPP--GGPPKPWPEG---------PMAN 291
Query: 307 GAAGFGMTS---PPPPT---SPSRTAVPPGLSSLPLTSVGNTGMKKVPKKLEEIPPASPE 360
AA PP PT SP+ AVPP S + + G P + +
Sbjct: 292 AAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSR 351
Query: 361 MAQMRK 366
+ ++K
Sbjct: 352 ITPIQK 357
Score = 33.9 bits (76), Expect = 2.6
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 2506 PPPPQPQPPP-PPQQPP--PPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
PP P +P P PP PP P+ PQ PA P + P Q Q++ P+Q P
Sbjct: 304 PPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPM--VPLHQKQSRITPIQKPRGL 361
Query: 2563 QP 2564
P
Sbjct: 362 DP 363
Score = 33.1 bits (74), Expect = 4.4
Identities = 79/349 (22%), Positives = 106/349 (30%), Gaps = 65/349 (18%)
Query: 2507 PPPQPQPPPPPQQPPPPLPQPQAAGSQ--PPAGPP-AVQPQPQPQPQTQPQP-VQAPAKA 2562
P P P P P P P P P +A S P GPP A P P P PQ + K
Sbjct: 16 PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKP 75
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVA 2622
++ G + + G M +G +G G P + ++ SP+
Sbjct: 76 MESMHEKGMS---DDPRYNQMKGMGMRSGGHAG-------MGPPPSPMDQHSQGYPSPL- 124
Query: 2623 PGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAVTSVTASAVVTTNL 2682
GGS H P PA+ M++ G + A+ N
Sbjct: 125 -------GGSE-----HASSP-----VPASGPSSGPQMSSGPGGAPLDGADPQALGQQNR 167
Query: 2683 TPV---QTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQ 2739
P Q L Q+ A+ L R Q Q Q ++
Sbjct: 168 GPTPFNQNQLHQLRAQIM--------------AYKMLARGQPLPDHLQMAVQGKRPMPGM 213
Query: 2740 QQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPP---- 2795
QQQ + S G P G P + MPP P
Sbjct: 214 QQQMPTLPPPSVSATG----PGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVP 269
Query: 2796 ---PPQAQSAPPQ-----PTAQVQVQTSQPPQQQSPQLTTVTAPRPGAL 2836
P Q PP+ P A TS P + PQ T +P P A+
Sbjct: 270 PGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Score = 32.7 bits (73), Expect = 5.8
Identities = 46/205 (22%), Positives = 63/205 (30%), Gaps = 23/205 (11%)
Query: 549 LHTPLPQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSS 608
+ TP P L G P P S P P P P PPS+
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPG--------PSPGSAHSMMGPSPGPPSA 52
Query: 609 QLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSS 668
PIP P G Q Q+ + + + DP + + S
Sbjct: 53 GHPIPTQGPG---------GYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGH 103
Query: 669 LAPVSGSGPGPSP--ARSSPVNRPSSATNKALSPVTSRTPGVVASAPTKPQSPAQNATSS 726
+G GP PSP S P + A SPV + P + P +
Sbjct: 104 ----AGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADP 159
Query: 727 QDSSQDTLTEQITLENQVHQRIAEL 751
Q Q +NQ+HQ A++
Sbjct: 160 QALGQQNRGPTPFNQNQLHQLRAQI 184
Score = 32.0 bits (71), Expect = 9.8
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 2498 AQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPP-AVQPQPQPQPQTQPQPV 2556
A PA + PPQ Q P P QP P +P Q P P + P Q +
Sbjct: 317 AVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQA 376
Query: 2557 QAPAKAQPAITTGGSAAVLAGTIKTSVT 2584
+ + Q GS LAG ++T T
Sbjct: 377 RIAHRIQELENLPGS---LAGDLRTKAT 401
>gi|164419749 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1 isoform b [Homo sapiens]
Length = 1042
Score = 192 bits (487), Expect = 6e-48
Identities = 115/331 (34%), Positives = 172/331 (51%), Gaps = 22/331 (6%)
Query: 1028 EAILPKGSARVTTSVKFN-APSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1085
E +L + ++F +PS + G LRDYQ GL+WL LY +NGILADE GLGK
Sbjct: 155 EELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGK 214
Query: 1086 TVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKR 1145
T+Q IA +L GPH+V+V + W E KRW P L+++ ++G A
Sbjct: 215 TLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFI 274
Query: 1146 QEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQ 1205
++ P + VC+TSY + + F + W+ LVIDE R+K + E V +S
Sbjct: 275 RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTN 334
Query: 1206 RLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYY--------HKVVI 1257
RLLL +PL N ELW +++FL+P + +++ ++ K+V
Sbjct: 335 RLLLTGTPLQNNLHELWALLNFLLPDVFN---------SADDFDSWFDTKNCLGDQKLVE 385
Query: 1258 RLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHF 1317
RLH V +PF+LRR K DVEK L K E + LS Q+ Y ++++ SG
Sbjct: 386 RLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVLNSSGKM 444
Query: 1318 --VNVLSILVRLQRICNHPGLVEPRHPGSSY 1346
+ +L+IL++L++ CNHP L + PG Y
Sbjct: 445 DKMRLLNILMQLRKCCNHPYLFDGAEPGPPY 475
Score = 108 bits (271), Expect = 6e-23
Identities = 57/139 (41%), Positives = 87/139 (62%), Gaps = 1/139 (0%)
Query: 1859 DSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQE 1918
+SGK+ L LL KLK +G RVLI SQM +LDILE + + Y R+D E+R+E
Sbjct: 484 NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREE 543
Query: 1919 LMRSFNRDRRI-FCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCK 1977
+ +FN F +LST + GINL AD V+ YD+D NP +D +A + RIG+ K
Sbjct: 544 AIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKK 603
Query: 1978 DIHIYRLVSGNSIEEKLLK 1996
+ ++RL++ N++EE++++
Sbjct: 604 PVRVFRLITDNTVEERIVE 622
>gi|21071044 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1 isoform a [Homo sapiens]
Length = 1054
Score = 192 bits (487), Expect = 6e-48
Identities = 115/331 (34%), Positives = 172/331 (51%), Gaps = 22/331 (6%)
Query: 1028 EAILPKGSARVTTSVKFN-APSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1085
E +L + ++F +PS + G LRDYQ GL+WL LY +NGILADE GLGK
Sbjct: 155 EELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGK 214
Query: 1086 TVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKR 1145
T+Q IA +L GPH+V+V + W E KRW P L+++ ++G A
Sbjct: 215 TLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFI 274
Query: 1146 QEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQ 1205
++ P + VC+TSY + + F + W+ LVIDE R+K + E V +S
Sbjct: 275 RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTN 334
Query: 1206 RLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYY--------HKVVI 1257
RLLL +PL N ELW +++FL+P + +++ ++ K+V
Sbjct: 335 RLLLTGTPLQNNLHELWALLNFLLPDVFN---------SADDFDSWFDTKNCLGDQKLVE 385
Query: 1258 RLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHF 1317
RLH V +PF+LRR K DVEK L K E + LS Q+ Y ++++ SG
Sbjct: 386 RLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMK-DIDVLNSSGKM 444
Query: 1318 --VNVLSILVRLQRICNHPGLVEPRHPGSSY 1346
+ +L+IL++L++ CNHP L + PG Y
Sbjct: 445 DKMRLLNILMQLRKCCNHPYLFDGAEPGPPY 475
Score = 100 bits (248), Expect = 3e-20
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 13/151 (8%)
Query: 1859 DSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQ- 1917
+SGK+ L LL KLK +G RVLI SQM +LDILE + + Y R+D E+R+
Sbjct: 484 NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERED 543
Query: 1918 -----------ELMRSFNRDRRI-FCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAK 1965
E + +FN F +LST + GINL AD V+ YD+D NP +D +
Sbjct: 544 KFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQ 603
Query: 1966 AQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 1996
A + RIG+ K + ++RL++ N++EE++++
Sbjct: 604 AMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
>gi|21071058 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a5 [Homo sapiens]
Length = 1052
Score = 190 bits (483), Expect = 2e-47
Identities = 114/336 (33%), Positives = 174/336 (51%), Gaps = 32/336 (9%)
Query: 1028 EAILPKGSARVTTSVKF-NAPSLL-YGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1085
E +L + S +F ++PS + +G LRDYQ GL+WL LY +NGILADE GLGK
Sbjct: 152 EELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGK 211
Query: 1086 TVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKR 1145
T+Q I+ ++ GPH+V+V + W E KRW P L+ + IG + A
Sbjct: 212 TLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFV 271
Query: 1146 QEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQ 1205
++ P + VC+TSY + + F + W+ LVIDE R+K + E V ++
Sbjct: 272 RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 331
Query: 1206 RLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYY--------HKVVI 1257
RLLL +PL N ELW++++FL+P + +++ ++ K+V
Sbjct: 332 RLLLTGTPLQNNLHELWSLLNFLLPDVFN---------SADDFDSWFDTNNCLGDQKLVE 382
Query: 1258 RLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYE-------DVILQPGTQE 1310
RLH V +PF+LRR K DVEK L K E + LS Q+ Y D++ G +
Sbjct: 383 RLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMD 442
Query: 1311 ALKSGHFVNVLSILVRLQRICNHPGLVEPRHPGSSY 1346
++ +L+IL++L++ CNHP L + PG Y
Sbjct: 443 KMR------LLNILMQLRKCCNHPYLFDGAEPGPPY 472
Score = 106 bits (264), Expect = 4e-22
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 1859 DSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQE 1918
+SGK+ L LL KLK +G RVLI SQM +LDILE + + Y R+D ++RQ+
Sbjct: 481 NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQD 540
Query: 1919 LMRSFNRDRRI-FCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCK 1977
+ ++N F +LST + GINL AD V+ YD+D NP +D +A + RIG+ K
Sbjct: 541 SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK 600
Query: 1978 DIHIYRLVSGNSIEEKLLKNGTKDL 2002
+ ++R ++ N++EE++++ L
Sbjct: 601 TVRVFRFITDNTVEERIVERAEMKL 625
>gi|190358534 SWI/SNF-related, matrix-associated actin-dependent
regulator of chromatin, subfamily a, containing DEAD/H
box 1 isoform b [Homo sapiens]
Length = 1026
Score = 171 bits (432), Expect = 1e-41
Identities = 104/295 (35%), Positives = 164/295 (55%), Gaps = 18/295 (6%)
Query: 1053 ALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRS 1112
+L+ YQK+GL+WLA +++ LNGILADE GLGKT+Q IAF A+L EGN GPHL+VV +
Sbjct: 496 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL-YQEGNNGPHLIVVPA 554
Query: 1113 CNILKWELELKRWCPGLKILSYIGSHRELKAKR-QEWAEPNSFHVCITSYTQFFRG---L 1168
I W E+ WCP LK+L Y GS E K R + ++V +T+Y
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDR 614
Query: 1169 TAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFL 1228
+ F R++ + DE +K M ++ + T+ + RLLL +P+ N LEL ++++F+
Sbjct: 615 SLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFV 674
Query: 1229 VPGI-------SRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTK 1281
+P + R SS ++ E+S Y + + ++ +PFILRR K +V KQL
Sbjct: 675 MPHMFSSSTSEIRRMFSSKTKSADEQS-IYEKERIAHAKQIIKPFILRRVKEEVLKQLPP 733
Query: 1282 KYEHVLKCRLSNRQKALYEDVI--LQPGTQEALKSGHFVNVLSILVRLQRICNHP 1334
K + + C +S +Q+ LY + L+ K+ NV +++L+++ NHP
Sbjct: 734 KKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNV---MMQLRKMANHP 785
Score = 115 bits (288), Expect = 7e-25
Identities = 57/138 (41%), Positives = 85/138 (61%)
Query: 1859 DSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQE 1918
DSGK L +L +LK +G RV++ SQ +MLDILE+ L H Y+R+D +R
Sbjct: 852 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 911
Query: 1919 LMRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
L+ FN D IF +LST + GINL A+ V+ +D D NP D +A++ C R+G+ K+
Sbjct: 912 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 971
Query: 1979 IHIYRLVSGNSIEEKLLK 1996
+ + +L+S +IEE +LK
Sbjct: 972 VLVIKLISQGTIEESMLK 989
>gi|190358536 SWI/SNF-related, matrix-associated actin-dependent
regulator of chromatin, subfamily a, containing DEAD/H
box 1 isoform a [Homo sapiens]
Length = 1028
Score = 169 bits (427), Expect = 5e-41
Identities = 101/294 (34%), Positives = 165/294 (56%), Gaps = 14/294 (4%)
Query: 1053 ALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRS 1112
+L+ YQK+GL+WLA +++ LNGILADE GLGKT+Q IAF A+L EGN GPHL+VV +
Sbjct: 496 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL-YQEGNNGPHLIVVPA 554
Query: 1113 CNILKWELELKRWCPGLKILSYIGSHRELKAKR-QEWAEPNSFHVCITSYTQFFRG---L 1168
I W E+ WCP LK+L Y GS E K R + ++V +T+Y
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDR 614
Query: 1169 TAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFL 1228
+ F R++ + DE +K M ++ + T+ + RLLL +P+ N LEL ++++F+
Sbjct: 615 SLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFV 674
Query: 1229 VPGI-------SRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTK 1281
+P + R SS ++ E+S Y + + ++ +PFILRR K +V KQL
Sbjct: 675 MPHMFSSSTSEIRRMFSSKTKSADEQS-IYEKERIAHAKQIIKPFILRRVKEEVLKQLPP 733
Query: 1282 KYEHVLKCRLSNRQKALYEDVILQ-PGTQEALKSGHFVNVLSILVRLQRICNHP 1334
K + + C +S +Q+ LY + + + L + + +++++L+++ NHP
Sbjct: 734 KKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTEMCNVMMQLRKMANHP 787
Score = 115 bits (288), Expect = 7e-25
Identities = 57/138 (41%), Positives = 85/138 (61%)
Query: 1859 DSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQE 1918
DSGK L +L +LK +G RV++ SQ +MLDILE+ L H Y+R+D +R
Sbjct: 854 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 913
Query: 1919 LMRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
L+ FN D IF +LST + GINL A+ V+ +D D NP D +A++ C R+G+ K+
Sbjct: 914 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 973
Query: 1979 IHIYRLVSGNSIEEKLLK 1996
+ + +L+S +IEE +LK
Sbjct: 974 VLVIKLISQGTIEESMLK 991
>gi|190358532 SWI/SNF-related, matrix-associated actin-dependent
regulator of chromatin, subfamily a, containing DEAD/H
box 1 isoform a [Homo sapiens]
Length = 1028
Score = 169 bits (427), Expect = 5e-41
Identities = 101/294 (34%), Positives = 165/294 (56%), Gaps = 14/294 (4%)
Query: 1053 ALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRS 1112
+L+ YQK+GL+WLA +++ LNGILADE GLGKT+Q IAF A+L EGN GPHL+VV +
Sbjct: 496 SLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL-YQEGNNGPHLIVVPA 554
Query: 1113 CNILKWELELKRWCPGLKILSYIGSHRELKAKR-QEWAEPNSFHVCITSYTQFFRG---L 1168
I W E+ WCP LK+L Y GS E K R + ++V +T+Y
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDR 614
Query: 1169 TAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFL 1228
+ F R++ + DE +K M ++ + T+ + RLLL +P+ N LEL ++++F+
Sbjct: 615 SLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFV 674
Query: 1229 VPGI-------SRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTK 1281
+P + R SS ++ E+S Y + + ++ +PFILRR K +V KQL
Sbjct: 675 MPHMFSSSTSEIRRMFSSKTKSADEQS-IYEKERIAHAKQIIKPFILRRVKEEVLKQLPP 733
Query: 1282 KYEHVLKCRLSNRQKALYEDVILQ-PGTQEALKSGHFVNVLSILVRLQRICNHP 1334
K + + C +S +Q+ LY + + + L + + +++++L+++ NHP
Sbjct: 734 KKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTEMCNVMMQLRKMANHP 787
Score = 115 bits (288), Expect = 7e-25
Identities = 57/138 (41%), Positives = 85/138 (61%)
Query: 1859 DSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQE 1918
DSGK L +L +LK +G RV++ SQ +MLDILE+ L H Y+R+D +R
Sbjct: 854 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 913
Query: 1919 LMRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
L+ FN D IF +LST + GINL A+ V+ +D D NP D +A++ C R+G+ K+
Sbjct: 914 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 973
Query: 1979 IHIYRLVSGNSIEEKLLK 1996
+ + +L+S +IEE +LK
Sbjct: 974 VLVIKLISQGTIEESMLK 991
>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
[Homo sapiens]
Length = 1828
Score = 165 bits (417), Expect = 7e-40
Identities = 99/297 (33%), Positives = 153/297 (51%), Gaps = 21/297 (7%)
Query: 1054 LRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSC 1113
LRDYQ GL+WLA + KN + ILADE GLGKT+Q I+F ++L +GP L+VV
Sbjct: 484 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543
Query: 1114 NILKWELELKRWCPGLKILSYIGSHRELKAKRQ-EWAEPNS----FHVCITSYTQFFRGL 1168
+ W+ E + W P + ++ YIG R+ EW + F+ IT+Y +
Sbjct: 544 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 603
Query: 1169 TAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFL 1228
T + W L +DE R+K ++ + +S RLL+ +PL N+ ELW+++HF+
Sbjct: 604 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 663
Query: 1229 VPGISRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLK 1288
+P + Y LH+V +PF+LRR K+DVEK L K E +L+
Sbjct: 664 MPEKFEFWEDFEEDHGKGRENGYQ-----SLHKVLEPFLLRRVKKDVEKSLPAKVEQILR 718
Query: 1289 CRLSNRQKALYEDVI------LQPGTQEALKSGHFVNVLSILVRLQRICNHPGLVEP 1339
+S QK Y+ ++ L GT+ G L+I++ L++ CNH L++P
Sbjct: 719 VEMSALQKQYYKWILTRNYKALAKGTR-----GSTSGFLNIVMELKKCCNHCYLIKP 770
Score = 115 bits (287), Expect = 9e-25
Identities = 62/145 (42%), Positives = 90/145 (62%), Gaps = 1/145 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGKL L LL +L+ G RVLI SQM+ MLDIL +L + + R+D + E R++
Sbjct: 790 SGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQA 849
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+ FN D FC +LST + GINL ADTVV +D+D NP D +AQ RIG+ K
Sbjct: 850 LDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ 909
Query: 1979 IHIYRLVSGNSIEEKLLKNGTKDLI 2003
++IYRLV+ ++EE++++ K ++
Sbjct: 910 VNIYRLVTKGTVEEEIIERAKKKMV 934
>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
sapiens]
Length = 1710
Score = 152 bits (384), Expect = 5e-36
Identities = 90/294 (30%), Positives = 153/294 (52%), Gaps = 15/294 (5%)
Query: 1054 LRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSC 1113
LRDYQ GL+WLA + K + ILADE GLGKT+Q I+F +L +GP L+VV
Sbjct: 481 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 540
Query: 1114 NILKWELELKRWCPGLKILSYIGS-HRELKAKRQEWAEPNS----FHVCITSYTQFFRGL 1168
+ W+ E++ W + + Y+G + + EW + F++ +T+Y +
Sbjct: 541 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDK 600
Query: 1169 TAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFL 1228
+ W + +DE R+K ++ + +S RLL+ +PL N+ ELW+++HF+
Sbjct: 601 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660
Query: 1229 VPGISRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLK 1288
+P + + ++Y + LH+ +PF+LRR K+DVEK L K E +L+
Sbjct: 661 MPEKFSSW--EDFEEEHGKGREYGY---ASLHKELEPFLLRRVKKDVEKSLPAKVEQILR 715
Query: 1289 CRLSNRQKALYEDVILQPGTQEAL---KSGHFVNVLSILVRLQRICNHPGLVEP 1339
+S QK Y+ ++ + +AL G L+I++ L++ CNH L++P
Sbjct: 716 MEMSALQKQYYKWILTR--NYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKP 767
Score = 117 bits (294), Expect = 1e-25
Identities = 101/324 (31%), Positives = 146/324 (45%), Gaps = 50/324 (15%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGKL L LL +L+ G RVLI SQM+ MLDIL +L + + R+D + E R++
Sbjct: 787 SGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQA 846
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+ FN + FC +LST + GINL ADTVV +D+D NP D +AQ RIG+ K
Sbjct: 847 LDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ 906
Query: 1979 IHIYRLVSGNSIEEKLLKNGTKDLIREVAAQGNDYSMAFLTQRTIQELFEVYSPMDDAGF 2038
++IYRLV+ S+EE +L+ K ++ L IQ MD G
Sbjct: 907 VNIYRLVTKGSVEEDILERAKKKMV--------------LDHLVIQR-------MDTTGK 945
Query: 2039 PVKAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEEDAQKSAQEGVLGPHTDALSS 2098
V S P E ++ + E K E E++ Q+ + +L +
Sbjct: 946 TVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEIL-----KRAE 1000
Query: 2099 DSENMPCDEEPSQLEELADFMEQLTPIEKYALNYLELFHTSIEQEKERNSEDAVMTAVRA 2158
EN EP L + + Q N+ + IE E ERNS++
Sbjct: 1001 THEN-----EPGPLTVGDELLSQFK-----VANFSNMDEDDIELEPERNSKN-------- 1042
Query: 2159 WEFWNLKTLQEREARLRLEQEEAE 2182
WE + + R RLE+EE +
Sbjct: 1043 WE-----EIIPEDQRRRLEEEERQ 1061
Score = 32.7 bits (73), Expect = 5.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 2716 LLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTSQVQ 2755
+L++QQQQQQQQQ Q ++ + ++S+V+
Sbjct: 101 ILKKQQQQQQQQQHQASSNSGSEEDSSSSEDSDDSSSEVK 140
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 146 bits (369), Expect = 3e-34
Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 42/341 (12%)
Query: 1052 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVR 1111
G L YQ GL+WL + + + ILADE GLGKT+Q I F L GP LV
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793
Query: 1112 SCNILKWELELKRWCPGLKILSYI----------------------GSHRELKAKRQEWA 1149
I+ WE E + W P +++Y G + K KR+
Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853
Query: 1150 EPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLL 1209
+ FHV +TSY A +RW CLV+DE R+K + + + + +LLL
Sbjct: 854 K---FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLL 910
Query: 1210 IDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVI-RLHRVTQPFIL 1268
+PL N EL+ +++FL P + L EE D + I +LH + P +L
Sbjct: 911 TGTPLQNNLEELFHLLNFLT-----PERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 965
Query: 1269 RRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKS---GHFVNVLSILV 1325
RR K DV K + K E +++ LS QK Y+ ++ + EAL S G+ V++L+I++
Sbjct: 966 RRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR--NFEALNSRGGGNQVSLLNIMM 1023
Query: 1326 RLQRICNHP------GLVEPRHPGSSYVAGPLEYPSASLIL 1360
L++ CNHP + P+ P +Y G L S L+L
Sbjct: 1024 DLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLML 1064
Score = 109 bits (273), Expect = 4e-23
Identities = 89/312 (28%), Positives = 149/312 (47%), Gaps = 24/312 (7%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGKL L +L+KLK +G RVLI SQM MLD+LE FL++ Y RID + RQE
Sbjct: 1059 SGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1118
Query: 1920 MRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+ FN + FC +LST + GINL ADTV+ +D+D NP D +A RIG+
Sbjct: 1119 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1178
Query: 1979 IHIYRLVSGNSIEEKL--------------LKNGTKDLIREVAAQGNDYSMAFLTQRTIQ 2024
+ IYR V+ S+EE++ ++ G ++ Q D + F T+ +
Sbjct: 1179 VMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFK 1238
Query: 2025 ELFEVYSPMDDAGFPVKAEEFV--VLSQEPSVTETIAPKIARPFIEALKSIEYL--EEDA 2080
+ E + +D+ E + +L + TE + ++ + K +Y+ EED
Sbjct: 1239 DENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDK 1298
Query: 2081 QKSAQEGVLGPHTDALSSDSENMPCDEEPSQLEELADFMEQLTPIEKYALNYLELFHTSI 2140
+ + ++ + E + Q E+LA + + + K +NY + +
Sbjct: 1299 IEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRK-QVNY----NDAA 1353
Query: 2141 EQEKERNSEDAV 2152
+++++ SE +V
Sbjct: 1354 QEDQDNQSEYSV 1365
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 146 bits (369), Expect = 3e-34
Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 42/341 (12%)
Query: 1052 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVR 1111
G L YQ GL+WL + + + ILADE GLGKT+Q I F L GP LV
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793
Query: 1112 SCNILKWELELKRWCPGLKILSYI----------------------GSHRELKAKRQEWA 1149
I+ WE E + W P +++Y G + K KR+
Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853
Query: 1150 EPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLL 1209
+ FHV +TSY A +RW CLV+DE R+K + + + + +LLL
Sbjct: 854 K---FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLL 910
Query: 1210 IDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVI-RLHRVTQPFIL 1268
+PL N EL+ +++FL P + L EE D + I +LH + P +L
Sbjct: 911 TGTPLQNNLEELFHLLNFLT-----PERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 965
Query: 1269 RRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKS---GHFVNVLSILV 1325
RR K DV K + K E +++ LS QK Y+ ++ + EAL S G+ V++L+I++
Sbjct: 966 RRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR--NFEALNSRGGGNQVSLLNIMM 1023
Query: 1326 RLQRICNHP------GLVEPRHPGSSYVAGPLEYPSASLIL 1360
L++ CNHP + P+ P +Y G L S L+L
Sbjct: 1024 DLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLML 1064
Score = 109 bits (273), Expect = 4e-23
Identities = 89/312 (28%), Positives = 149/312 (47%), Gaps = 24/312 (7%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGKL L +L+KLK +G RVLI SQM MLD+LE FL++ Y RID + RQE
Sbjct: 1059 SGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1118
Query: 1920 MRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+ FN + FC +LST + GINL ADTV+ +D+D NP D +A RIG+
Sbjct: 1119 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1178
Query: 1979 IHIYRLVSGNSIEEKL--------------LKNGTKDLIREVAAQGNDYSMAFLTQRTIQ 2024
+ IYR V+ S+EE++ ++ G ++ Q D + F T+ +
Sbjct: 1179 VMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFK 1238
Query: 2025 ELFEVYSPMDDAGFPVKAEEFV--VLSQEPSVTETIAPKIARPFIEALKSIEYL--EEDA 2080
+ E + +D+ E + +L + TE + ++ + K +Y+ EED
Sbjct: 1239 DENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDK 1298
Query: 2081 QKSAQEGVLGPHTDALSSDSENMPCDEEPSQLEELADFMEQLTPIEKYALNYLELFHTSI 2140
+ + ++ + E + Q E+LA + + + K +NY + +
Sbjct: 1299 IEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRK-QVNY----NDAA 1353
Query: 2141 EQEKERNSEDAV 2152
+++++ SE +V
Sbjct: 1354 QEDQDNQSEYSV 1365
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 146 bits (369), Expect = 3e-34
Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 42/341 (12%)
Query: 1052 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVR 1111
G L YQ GL+WL + + + ILADE GLGKT+Q I F L GP LV
Sbjct: 793 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 852
Query: 1112 SCNILKWELELKRWCPGLKILSYI----------------------GSHRELKAKRQEWA 1149
I+ WE E + W P +++Y G + K KR+
Sbjct: 853 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 912
Query: 1150 EPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLL 1209
+ FHV +TSY A +RW CLV+DE R+K + + + + +LLL
Sbjct: 913 K---FHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLL 969
Query: 1210 IDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVI-RLHRVTQPFIL 1268
+PL N EL+ +++FL P + L EE D + I +LH + P +L
Sbjct: 970 TGTPLQNNLEELFHLLNFLT-----PERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 1024
Query: 1269 RRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKS---GHFVNVLSILV 1325
RR K DV K + K E +++ LS QK Y+ ++ + EAL S G+ V++L+I++
Sbjct: 1025 RRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR--NFEALNSRGGGNQVSLLNIMM 1082
Query: 1326 RLQRICNHP------GLVEPRHPGSSYVAGPLEYPSASLIL 1360
L++ CNHP + P+ P +Y G L S L+L
Sbjct: 1083 DLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLML 1123
Score = 109 bits (273), Expect = 4e-23
Identities = 89/312 (28%), Positives = 149/312 (47%), Gaps = 24/312 (7%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGKL L +L+KLK +G RVLI SQM MLD+LE FL++ Y RID + RQE
Sbjct: 1118 SGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1177
Query: 1920 MRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+ FN + FC +LST + GINL ADTV+ +D+D NP D +A RIG+
Sbjct: 1178 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1237
Query: 1979 IHIYRLVSGNSIEEKL--------------LKNGTKDLIREVAAQGNDYSMAFLTQRTIQ 2024
+ IYR V+ S+EE++ ++ G ++ Q D + F T+ +
Sbjct: 1238 VMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFK 1297
Query: 2025 ELFEVYSPMDDAGFPVKAEEFV--VLSQEPSVTETIAPKIARPFIEALKSIEYL--EEDA 2080
+ E + +D+ E + +L + TE + ++ + K +Y+ EED
Sbjct: 1298 DENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDK 1357
Query: 2081 QKSAQEGVLGPHTDALSSDSENMPCDEEPSQLEELADFMEQLTPIEKYALNYLELFHTSI 2140
+ + ++ + E + Q E+LA + + + K +NY + +
Sbjct: 1358 IEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRK-QVNY----NDAA 1412
Query: 2141 EQEKERNSEDAV 2152
+++++ SE +V
Sbjct: 1413 QEDQDNQSEYSV 1424
Score = 38.1 bits (87), Expect = 0.14
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQ------PQAAGSQPPAGPPAVQPQPQP 2547
PPPP P PP PP PPPP + P A G + P Q + +P
Sbjct: 74 PPPPPPPPPLPPPPPPPPPDKDDIRLLPSALGVKKRKRGPKKQKENKP 121
Score = 34.7 bits (78), Expect = 1.5
Identities = 18/34 (52%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Query: 2506 PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPP 2539
PP PPPPP PPPPLP P PP PP
Sbjct: 67 PPGCHLFPPPPP--PPPPLPPP------PPPPPP 92
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 144 bits (362), Expect = 2e-33
Identities = 104/338 (30%), Positives = 157/338 (46%), Gaps = 36/338 (10%)
Query: 1052 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVR 1111
G L YQ GL+WL + + + ILADE GLGKTVQ F L + GP LV
Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783
Query: 1112 SCNILKWELELKRWCPGLKILSYIGSH------RE-------------LKAKRQEWAEPN 1152
I+ WE E + W P + +++Y+G RE KA R +
Sbjct: 784 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843
Query: 1153 SFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDS 1212
FHV +TSY + + W CL++DE R+K + + + Q +LLL +
Sbjct: 844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 903
Query: 1213 PLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVI-RLHRVTQPFILRRT 1271
PL N EL+ +++FL P L EE D + I +LH + P +LRR
Sbjct: 904 PLQNNLEELFHLLNFLT-----PERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 958
Query: 1272 KRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKS---GHFVNVLSILVRLQ 1328
K DV K + K E +++ LS QK Y+ ++ + EAL + G+ V++L++++ L+
Sbjct: 959 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTR--NFEALNARGGGNQVSLLNVVMDLK 1016
Query: 1329 RICNHP------GLVEPRHPGSSYVAGPLEYPSASLIL 1360
+ CNHP + P+ P Y L S L+L
Sbjct: 1017 KCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLL 1054
Score = 107 bits (268), Expect = 1e-22
Identities = 64/145 (44%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGKL L +L+ LK G RVLI SQM MLD+LE FL Y RID + RQE
Sbjct: 1049 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1108
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+ FN + FC +LST + GINL ADTV+ YD+D NP D +A RIG+ K
Sbjct: 1109 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1168
Query: 1979 IHIYRLVSGNSIEEKLLKNGTKDLI 2003
+ IYR V+ S+EE++ + K ++
Sbjct: 1169 VMIYRFVTRASVEERITQVAKKKMM 1193
Score = 35.8 bits (81), Expect = 0.68
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 812 EEKQLREERGKKEEQSRLRRIAASTAREIECFWSNIEQVVEIKLRVEL---EEKRKKALN 868
EE L+EE + E+ ++ A TA IEC + + K+ VE EEK +KA
Sbjct: 1567 EENSLKEEESIEGEKE-VKSTAPETA--IECTQAPAPASEDEKVVVEPPEGEEKVEKA-E 1622
Query: 869 LQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDEVDDEEETIEEEEANEGV 928
+++ + E PKG +++ + K++I LT V+D+EE EEEE E +
Sbjct: 1623 VKERTEEPMETEPKGAADVEKV---------EEKSAIDLTPIVVEDKEEKKEEEEKKEVM 1673
Query: 929 VDHQTELSNLAKEAE 943
+ + +L E +
Sbjct: 1674 LQNGETPKDLNDEKQ 1688
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 144 bits (362), Expect = 2e-33
Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 36/338 (10%)
Query: 1052 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVR 1111
G L YQ GL+WL + + + ILADE GLGKTVQ I F L + GP+LV
Sbjct: 698 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 757
Query: 1112 SCNILKWELELKRWCPGLKILSYIGSHRELKAKRQ-EWA-EPNS---------------- 1153
I+ WE E + W P +++Y G R+ E++ E N+
Sbjct: 758 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQI 817
Query: 1154 -FHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDS 1212
FHV +TSY + W CLV+DE R+K + + + + + +LLL +
Sbjct: 818 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 877
Query: 1213 PLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVI-RLHRVTQPFILRRT 1271
PL N EL+ +++FL P + L EE D + I +LH + P +LRR
Sbjct: 878 PLQNNLEELFHLLNFLT-----PERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRL 932
Query: 1272 KRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKS---GHFVNVLSILVRLQ 1328
K DV K + K E +++ LS QK Y+ ++ + EAL S G+ V++L+I++ L+
Sbjct: 933 KADVFKNMPAKTELIVRVELSQMQKKYYKFILTR--NFEALNSKGGGNQVSLLNIMMDLK 990
Query: 1329 RICNHPGLV------EPRHPGSSYVAGPLEYPSASLIL 1360
+ CNHP L P P SY L S L+L
Sbjct: 991 KCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 1028
Score = 110 bits (275), Expect = 2e-23
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGKL L +L+KL+ EG RVLI SQM MLD+LE FL + Y RID + RQE
Sbjct: 1023 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1082
Query: 1920 MRSFNRD-RRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+ FN + FC +LST + GINL ADTV+ YD+D NP D +A RIG+ K
Sbjct: 1083 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1142
Query: 1979 IHIYRLVSGNSIEEKL 1994
+ IYR V+ S+EE++
Sbjct: 1143 VMIYRFVTRASVEERI 1158
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 142 bits (357), Expect = 7e-33
Identities = 98/304 (32%), Positives = 151/304 (49%), Gaps = 33/304 (10%)
Query: 1054 LRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSC 1113
LR+YQ G++WL + N ILADE GLGKT+Q I F + +G GP LV+
Sbjct: 968 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYL-KGIHGPFLVIAPLS 1026
Query: 1114 NILKWELELKRWCPGLKILSYIGSH---RELKAKRQEWAEPNS--------FHVCITSYT 1162
I WE E + W L ++ Y GS R ++ + +P FH IT++
Sbjct: 1027 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1085
Query: 1163 QFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELW 1222
+ W+C+VIDE R+K + E + + + ++LL +PL NT EL+
Sbjct: 1086 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 1145
Query: 1223 TMVHFLVPGISRPYLSSPLRAPSEES--QDY----YHKVVIRLHRVTQPFILRRTKRDVE 1276
+++HFL P R PSE + Q++ + V +L + +P +LRR K DVE
Sbjct: 1146 SLLHFL----------EPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVE 1195
Query: 1277 KQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSG---HFVNVLSILVRLQRICNH 1333
K L K E +++ L+N QK Y IL+ K G + N+L+ ++ L++ CNH
Sbjct: 1196 KNLAPKEETIIEVELTNIQKKYYR-AILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNH 1254
Query: 1334 PGLV 1337
P L+
Sbjct: 1255 PYLI 1258
Score = 102 bits (253), Expect = 8e-21
Identities = 66/180 (36%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 1824 LRQGLREHAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLIL 1883
L G E F++ +P +L+ + +GKL + LL KLK+ G RVLI
Sbjct: 1257 LINGAEEKILEEFKETHNAESPDF----QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1312
Query: 1884 SQMILMLDILEMFLNFHYLTYVRIDENASSEQRQELMRSFNR-DRRIFCAILSTHSRTTG 1942
SQM+ LDILE +L Y RID RQ + F++ D F +L T + G
Sbjct: 1313 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1372
Query: 1943 INLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNGTKDL 2002
INL ADT + +D+D NP D +AQ C RIG+ K + IYRL++ NS E ++ + L
Sbjct: 1373 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1432
Score = 39.3 bits (90), Expect = 0.062
Identities = 84/399 (21%), Positives = 123/399 (30%), Gaps = 64/399 (16%)
Query: 2446 LGMNPFQKNPKHASVLAESGINYDKPLPPIQVASLRAERIAKEKKALADQQKAQQPAVAQ 2505
+G+ P +N +H +S + RA ++ + +A QQ+
Sbjct: 123 MGVYPGMQNERHGQSFVDSSSMWGP----------RAVQVPDQIRAPYQQQQ-------- 164
Query: 2506 PPPPQPQPPPPPQQPPPPLPQP---QAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKA 2562
PQPQPP P PP P Q GS G ++Q QPQ Q + ++
Sbjct: 165 ---PQPQPPQPAPSGPPAQGHPQHMQQMGSYMARGDFSMQQHGQPQ-----QRMSQFSQG 216
Query: 2563 QPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVA 2622
Q + G +G S P+ A S V P+ + + +
Sbjct: 217 QEGLNQGNPFIATSGPGHLSHVPQQSPSMAPSLRHSVQQFHHHPSTALHGESVAHSPRFS 276
Query: 2623 PGALTTPGGSAPAQVVHTQPPPRAVGSPATATPDLVS----MATTQGVRAVTSVTASAVV 2678
P G+ Q ++ + V SP S QG+ T + + +
Sbjct: 277 PN--PPQQGAVRPQTLNFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGL 334
Query: 2679 TTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQ 2738
T N TP VP+ A G Q QQ
Sbjct: 335 TNN-----TPMNQSVPRYPNAVGF-------------------PSNSGQGLMHQQPIHPS 370
Query: 2739 QQQQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMP----PQP 2794
Q QT SQ Q SP + + TP ++ + M P
Sbjct: 371 GSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIPMEVGSYPNM 430
Query: 2795 PPPQAQSAPPQPTAQVQVQTSQPPQQQS-PQLTTVTAPR 2832
P PQ PP Q QQS P + +APR
Sbjct: 431 PHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFIGMSSAPR 469
Score = 34.3 bits (77), Expect = 2.0
Identities = 74/320 (23%), Positives = 116/320 (36%), Gaps = 31/320 (9%)
Query: 467 RQQAMPSTGMAEQSKRPRLEVGH--QGVVFQHPGADAGVPLQQLMPTAQGGMPPTPQAAQ 524
R Q +PS + + R + QG+V + G + + L P Q +P P A
Sbjct: 295 RSQTVPSPTINNSGQYSRYPYSNLNQGLV-NNTGMNQNLGLTNNTPMNQS-VPRYPNAVG 352
Query: 525 L---AGQR-QSQQQYDPSTGPPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQQP 580
+GQ QQ PS N ++H PQ PP P A+S+ P
Sbjct: 353 FPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAG-TPPP 411
Query: 581 QVVEAQTQLQIPVKTQQPNVPIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQ---- 636
QV + + V + PN+P P P S P P + + G +Q S+
Sbjct: 412 QVRPGSAGIPMEVGS-YPNMPHPQP--SHQP-----PGAMGIGQRNMGPRNMQQSRPFIG 463
Query: 637 LSSLPQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPA----RSSPVNRPSS 692
+SS P+ + P + P P + L P PG P+ + P +P
Sbjct: 464 MSSAPRELTGHMRP-NGCPGVGLGDPQAIQERLIP-GQQHPGQQPSFQQLPTCPPLQPHP 521
Query: 693 ATNKALSPVTSRTPGVVASAPTKPQSPAQNATSSQDSSQDTLTEQITLENQVHQRIAELR 752
+ SP P+ +P + S+ L + + QV A+L
Sbjct: 522 GLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEPFLEKPVPDMTQVSGPNAQLV 581
Query: 753 KAGLWSQRRLPKLQEAPRPK 772
K S LP +++ P+ K
Sbjct: 582 K----SDDYLPSIEQQPQQK 597
Score = 32.7 bits (73), Expect = 5.8
Identities = 80/352 (22%), Positives = 121/352 (34%), Gaps = 75/352 (21%)
Query: 26 EEQPAHPNPPPSPAAPFAPSASPSAPQSPSY------------QIQQLMNRSPATGQNVN 73
++QP P P+P+ P A Q SY Q QQ M++ + +N
Sbjct: 162 QQQPQPQPPQPAPSGPPAQGHPQHMQQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLN 221
Query: 74 ITLQSVGPVVGGNQQITLAPLPLPSPT-SPGFQFSAQ-----PRRFEHG----------- 116
P + + L+ +P SP+ +P + S Q P HG
Sbjct: 222 ----QGNPFIATSGPGHLSHVPQQSPSMAPSLRHSVQQFHHHPSTALHGESVAHSPRFSP 277
Query: 117 SPSYIQVTSPLSQQVQTQSPTQPSPGPGQALQNVRAGAPGPGLGLCSSSPTG---GFVDA 173
+P P + ++S T PSP + Q R GL +++ G +
Sbjct: 278 NPPQQGAVRPQTLNFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNN 337
Query: 174 SVLVRQISLSPSSGGHFVFQDGSGLTQIAQGAQVQLQHPG---TPITVRERRPSQPHTQS 230
+ + + + P++ G F G GL Q HP + + PSQP
Sbjct: 338 TPMNQSVPRYPNAVG-FPSNSGQGL------MHQQPIHPSGSLNQMNTQTMHPSQPQ--- 387
Query: 231 GGTIHHLGPQSPAAAGGAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVLQGPPLPR 290
GT P SP A P +P PPQ+ G +V P +P
Sbjct: 388 -GTYASPPPMSPMKAMS---NPAGTP--------PPQVR---PGSAGIPMEVGSYPNMPH 432
Query: 291 PLGFERTPGVLLPGAGGAAGFGMTSPPPPT-SPSRTAVPPGLSSLPLTSVGN 341
P + P GA G G + P SR + G+SS P G+
Sbjct: 433 PQPSHQPP--------GAMGIGQRNMGPRNMQQSRPFI--GMSSAPRELTGH 474
Score = 32.0 bits (71), Expect = 9.8
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 12/80 (15%)
Query: 2487 KEKKALADQQKAQQPAVAQPPPPQPQPPPP--PQQPPPPLPQPQAAGSQPPAGPPAVQPQ 2544
+E+ Q QQP+ Q P P P P Q PP P Q P Q
Sbjct: 492 QERLIPGQQHPGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQ----------PWAQLH 541
Query: 2545 PQPQPQTQPQPVQAPAKAQP 2564
P PQ Q PV + ++P
Sbjct: 542 PSPQNTPQKVPVHQHSPSEP 561
>gi|148612870 chromodomain helicase DNA binding protein 1-like [Homo
sapiens]
Length = 897
Score = 141 bits (355), Expect = 1e-32
Identities = 90/308 (29%), Positives = 156/308 (50%), Gaps = 3/308 (0%)
Query: 1054 LRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSC 1113
LR YQ G++WLA+ + IL DE GLGKT Q IA F +LA + GP L++
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 105
Query: 1114 NILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTR 1173
+ W+ E++R+ PGL ++Y G E +Q+ + + FHV +T+Y + +
Sbjct: 106 VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKS 165
Query: 1174 VRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFLVPGI- 1232
W LV+DE R+K + + + LLL +P+ N+ EL++++ F+ P +
Sbjct: 166 FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLF 225
Query: 1233 SRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLS 1292
S+ + ++ + ++ + LH++ QPF+LRR K +V +L KK E V+ +S
Sbjct: 226 SKEEVGDFIQRYQDIEKE--SESASELHKLLQPFLLRRVKAEVATELPKKTEVVIYHGMS 283
Query: 1293 NRQKALYEDVILQPGTQEALKSGHFVNVLSILVRLQRICNHPGLVEPRHPGSSYVAGPLE 1352
QK Y+ ++++ ++ V + +IL +L++ +HP L + P V L
Sbjct: 284 ALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLT 343
Query: 1353 YPSASLIL 1360
S L L
Sbjct: 344 EASGKLHL 351
Score = 99.4 bits (246), Expect = 5e-20
Identities = 56/157 (35%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGKL L LL L S G RVL+ SQM MLDIL+ ++++ +Y R+D + E+R
Sbjct: 346 SGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLA 405
Query: 1920 MRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDI 1979
+++F + + IF +LST + G+NL ADTV+F D+D NP D +A RIG+ K +
Sbjct: 406 IKNFGQ-QPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSV 464
Query: 1980 HIYRLVSGNSIEEKLLKNGTKDL-IREVAAQGNDYSM 2015
+ RL+ +++EE + + L + + +G +++
Sbjct: 465 KVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTL 501
>gi|114326455 chromodomain helicase DNA binding protein 8 [Homo
sapiens]
Length = 2302
Score = 140 bits (353), Expect = 2e-32
Identities = 92/301 (30%), Positives = 153/301 (50%), Gaps = 27/301 (8%)
Query: 1054 LRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSC 1113
LR+YQ G++WL + N ILADE GLGKT+Q IAF + N G GP LV+
Sbjct: 532 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLS 590
Query: 1114 NILKWELELKRWCPGLKILSYIGS--HRELKAKRQEWAEPN---------SFHVCITSYT 1162
I WE E W + + Y GS R++ + + + + + F IT++
Sbjct: 591 TITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 649
Query: 1163 QFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELW 1222
+ W+C++IDE R+K + +++ + + ++LL +PL NT EL+
Sbjct: 650 MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF 709
Query: 1223 TMVHFLVPGISRPYLSSPLRAPSEESQDY----YHKVVIRLHRVTQPFILRRTKRDVEKQ 1278
+++HFL P S + SE +D+ + V +L + +P +LRR K DVEK
Sbjct: 710 SLLHFLEP--------SQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKN 761
Query: 1279 LTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGH--FVNVLSILVRLQRICNHPGL 1336
L K E +++ L+N QK Y ++ + + + +GH N+L+ ++ L++ CNHP L
Sbjct: 762 LAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYL 821
Query: 1337 V 1337
+
Sbjct: 822 I 822
Score = 99.0 bits (245), Expect = 7e-20
Identities = 58/144 (40%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
+GKL + LL KLK+ G +VLI SQM+ LDILE +L Y RID RQ
Sbjct: 853 AGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAA 912
Query: 1920 MRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1978
+ F++ D F +L T + GINL ADT + +D+D NP D +AQ C RIG+ K
Sbjct: 913 IDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA 972
Query: 1979 IHIYRLVSGNSIEEKLLKNGTKDL 2002
+ +YRL++ NS E ++ + L
Sbjct: 973 VKVYRLITRNSYEREMFDKASLKL 996
Score = 50.4 bits (119), Expect = 3e-05
Identities = 107/444 (24%), Positives = 159/444 (35%), Gaps = 101/444 (22%)
Query: 537 PSTGPPVQNAASLHTPLPQLPGRLPPAGVPTAALSSALQFAQQP-QVVEAQTQLQIPVKT 595
P +G P + H L LPG++ G AAL+ A QP +VV Q Q+Q P
Sbjct: 15 PQSGGPQGHR---HVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQP--- 68
Query: 596 QQPNVPIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAP 655
QQ +P PPSSQ QP Q P
Sbjct: 69 QQKIQIVPQPPSSQ-----PQPQQ-----------------------------------P 88
Query: 656 PCPRPLPTSSTSSLAPVSGSGPGPSPARSSPVN---RPSSATNKALSPVTSRTPGVVASA 712
P +P+ SS A + G G P S PV +P + +++ S S + AS
Sbjct: 89 PSTQPVTLSSVQQ-AQIMGPGQSPGQRLSVPVKVVLQPQAGSSQGASSGLSVVKVLSASE 147
Query: 713 PTKPQSPAQNATSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEAPRPK 772
SPA +A S + + E LE+Q Q A A ++ R Q PR
Sbjct: 148 VAALSSPASSAPHS--GGKTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVL 205
Query: 773 SHWDYLLEEMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQLREERGKKEEQSRLRRI 832
+ +E+ + + E++ + +A ++L+EE+ KK + S +
Sbjct: 206 NE-----DELPSVRPEEEGEKKRRKKSA------------GERLKEEKPKKSKTSGASKT 248
Query: 833 AASTAREIECFWSNIEQVVEIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESSL 892
+ + I VV K + + S R E ESS+
Sbjct: 249 KGKSK------LNTITPVVGKKRKRNTSSDNSDVEVMPAQSPREDE----------ESSI 292
Query: 893 DSGMSGR--KRKASISLTDDEVDDEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLM 950
S R KRK D ++ D+EE EEE G + + L +E
Sbjct: 293 QKRRSNRQVKRKKYTEDLDIKITDDEE--EEEVDVTGPIKPEPILPEPVQEP-------- 342
Query: 951 KLYEGAFLPSSQWPRPKPDGEDTS 974
+G LPS Q+ P ED +
Sbjct: 343 ---DGETLPSMQFFVENPSEEDAA 363
Score = 39.7 bits (91), Expect = 0.047
Identities = 47/148 (31%), Positives = 62/148 (41%), Gaps = 36/148 (24%)
Query: 2491 ALADQQKAQ-QPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQP 2549
AL + AQ QPA Q Q P QQ +PQP P+ QPQPQ P
Sbjct: 44 ALTQAKNAQGQPAKVVTIQLQVQQP---QQKIQIVPQP-----------PSSQPQPQQPP 89
Query: 2550 QTQPQPVQAPAKAQ---PAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVP 2606
TQP + + +AQ P + G +V + G+S GA SG +V ++
Sbjct: 90 STQPVTLSSVQQAQIMGPGQSPGQRLSVPVKVVLQPQAGSSQ--GASSGLSVVKVLS--- 144
Query: 2607 AATFQSINKRLASPVAPGALTTPGGSAP 2634
AS VA AL++P SAP
Sbjct: 145 -----------ASEVA--ALSSPASSAP 159
Score = 38.9 bits (89), Expect = 0.080
Identities = 64/234 (27%), Positives = 82/234 (35%), Gaps = 43/234 (18%)
Query: 1561 LPSGEVVKIAQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGSV 1620
LP V++ QLA++T ++ QP VT+Q Q QP Q
Sbjct: 31 LPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQ---------------VQQPQQ----K 71
Query: 1621 LQIVSAP--GQPYLRAP---GPVVMQTVSQAGAVHGALGSKPPAGGPSPAPLTPQVG--- 1672
+QIV P QP + P PV + +V QA + P L PQ G
Sbjct: 72 IQIVPQPPSSQPQPQQPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPVKVVLQPQAGSSQ 131
Query: 1673 --VPGRVAVNALAVGEPGTASKPASPI---GGPTQEEKTRLLKERLDQ----------IY 1717
G V L+ E S PAS GG T E+ R L+ + Q I
Sbjct: 132 GASSGLSVVKVLSASEVAALSSPASSAPHSGGKTGMEENRRLEHQKKQEKANRIVAEAIA 191
Query: 1718 LVNERRCSQAP-VYGRDLLRICALPSHGRVQWRGSLDGRRGKEAGPAHSYTSSS 1770
R P V D L G + R G R KE P S TS +
Sbjct: 192 RARARGEQNIPRVLNEDELPSVRPEEEGEKKRRKKSAGERLKEEKPKKSKTSGA 245
Score = 37.4 bits (85), Expect = 0.23
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 2476 QVASLRAERIAKEK--KALADQQKAQQPA-----VAQPPPPQPQPPPPPQQPPPPLPQPQ 2528
Q+A+L + A+ + K + Q + QQP V QPP QPQP PP P L Q
Sbjct: 41 QLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSSQPQPQQPPSTQPVTLSSVQ 100
Query: 2529 AAGSQPPAGPPAVQPQPQPQPQTQPQ 2554
A P P + + QPQ
Sbjct: 101 QAQIMGPGQSPGQRLSVPVKVVLQPQ 126
Score = 37.0 bits (84), Expect = 0.31
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 18/131 (13%)
Query: 2755 QVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQT 2814
Q QGQ PA++ +T + ++ +QK+Q+ PQPP Q Q P T V + +
Sbjct: 47 QAKNAQGQ---PAKV-----VTIQLQVQQPQQKIQIVPQPPSSQPQPQQPPSTQPVTLSS 98
Query: 2815 SQPPQQQSPQLTTVTAPRPGALLTGTTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQV 2874
Q Q P PG L+ ++V + +SQ + G + ++V
Sbjct: 99 VQQAQIMGP------GQSPGQRLS----VPVKVVLQPQAGSSQGASSGLSVVKVLSASEV 148
Query: 2875 ALAKPPVVSVP 2885
A P S P
Sbjct: 149 AALSSPASSAP 159
Score = 35.8 bits (81), Expect = 0.68
Identities = 23/52 (44%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 2721 QQQQQQQQQQ----QQQQQQQQQQQQQQQQQTTTTSQVQVPQIQGQAQSPAQ 2768
Q Q QQ QQ+ Q Q Q QQ Q T S VQ QI G QSP Q
Sbjct: 62 QLQVQQPQQKIQIVPQPPSSQPQPQQPPSTQPVTLSSVQQAQIMGPGQSPGQ 113
Score = 32.7 bits (73), Expect = 5.8
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 21/155 (13%)
Query: 2691 SLVPQVSQATGVQ---------LPGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQ 2741
+LV Q Q+ G Q LPGK + + Q + Q Q + Q Q QQ
Sbjct: 9 TLVLQQPQSGGPQGHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQP 68
Query: 2742 QQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQS 2801
QQ+ Q Q P Q Q Q P + P L +Q+ ++ M P P Q S
Sbjct: 69 QQKIQIVP-----QPPSSQPQPQQPPSTQ------PVTLSSVQQAQI-MGPGQSPGQRLS 116
Query: 2802 APPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGAL 2836
P + Q Q +SQ + ++A AL
Sbjct: 117 VPVKVVLQPQAGSSQGASSGLSVVKVLSASEVAAL 151
Score = 32.7 bits (73), Expect = 5.8
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 29/215 (13%)
Query: 2890 SSPGVTTLPMNVAGISVAIGQPQKAAGQTVVAQPVHMQ-QLLKLKQQAVQQQKAIQPQAA 2948
S PG L N A+ Q + A GQ + +Q Q + K Q V Q + QPQ
Sbjct: 30 SLPGKIVLQGNQLA---ALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSSQPQPQ 86
Query: 2949 QGPAAVQQKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVA 3008
Q P+ Q +T QQ Q + S Q+L+ +V Q Q
Sbjct: 87 QPPST-------QPVTLSSVQQ-----------AQIMGPGQSPGQRLSVPVKVVLQPQAG 128
Query: 3009 KLPQVVQQQTPVASIQQVASASQQASPQTVALTQATAAGQQVQMIPAVTATAQVVQQKLI 3068
Q + S+ +V SAS+ A+ + A + A +G + M Q Q+K
Sbjct: 129 S----SQGASSGLSVVKVLSASEVAALSSPA-SSAPHSGGKTGMEENRRLEHQKKQEK-- 181
Query: 3069 QQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPK 3103
++V A A + G N +V + PS +P+
Sbjct: 182 ANRIVAEAIARARARGEQNIPRVLNEDELPSVRPE 216
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 140 bits (353), Expect = 2e-32
Identities = 92/304 (30%), Positives = 156/304 (51%), Gaps = 31/304 (10%)
Query: 1054 LRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSC 1113
LR+YQ GL+WL + N ILADE GLGKT+Q I F + G GP L++
Sbjct: 860 LREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLS 918
Query: 1114 NILKWELELKRWCPGLKILSYIGS--HRELKAKRQEWAEPNS---------FHVCITSYT 1162
I WE E + W + ++ Y GS R++ + + + + F IT++
Sbjct: 919 TIANWEREFRTWTD-INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFE 977
Query: 1163 QFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELW 1222
G + W+C++IDE R+K + E + + + ++LL +PL NT EL+
Sbjct: 978 MILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELF 1037
Query: 1223 TMVHFLVPGISRPYLSSPLRAPSEES--QDY----YHKVVIRLHRVTQPFILRRTKRDVE 1276
+++HFL PLR PSE + Q++ + V +L + +P +LRR K DVE
Sbjct: 1038 SLLHFL----------EPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVE 1087
Query: 1277 KQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSG--HFVNVLSILVRLQRICNHP 1334
K+L K E +++ L+N QK Y ++ + + + +G + N+++ ++ L++ CNHP
Sbjct: 1088 KKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHP 1147
Query: 1335 GLVE 1338
L++
Sbjct: 1148 YLIK 1151
Score = 100 bits (250), Expect = 2e-20
Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Query: 1838 QLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFL 1897
+ R T P F ++Q +GKL + LL K+K+ G +VLI SQM+ LDILE +L
Sbjct: 1160 EFRDTYNPAASDFHLQAMIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL 1218
Query: 1898 NFHYLTYVRIDENASSEQRQELMRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDN 1956
Y RID RQ + F++ D F +L T + GINL ADT + +D+
Sbjct: 1219 IHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS 1278
Query: 1957 DLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNGTKDL 2002
D NP D +AQ C RIG+ K + +YRLV+ NS E ++ + L
Sbjct: 1279 DWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKL 1324
Score = 40.4 bits (93), Expect = 0.028
Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 23/226 (10%)
Query: 520 PQAAQLAGQR---QSQQQYDPSTGPPVQN--AASLHTPLPQLPGRLPPAGVPTAALS-SA 573
P+ + +A QR QS+ + ++ P +Q A +PL LP L G+ + +
Sbjct: 1990 PELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAKGIILEEMKVKS 2049
Query: 574 LQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSSQLPIPPSQPAQLALHVPTPGKVQVQ 633
++PQ E ++ + +T + P+ +P + LP Q + GK +
Sbjct: 2050 ENLKEEPQSSEEESMSSVETRTLIKSEPV-SPKNGVLP-------QATGDQKSGGKCETD 2101
Query: 634 ASQLSSLPQMVASTRLPVDPAPPC--PRPLPTSSTSSLAPVSGSGPGPSPARSSPVNRPS 691
+MVA+ P+ P P PR S SS S S +RSS + S
Sbjct: 2102 R-------RMVAARTEPLTPNPASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSS 2154
Query: 692 SATNKALSPVTSRTPGVVASAPTKPQSPAQNATSSQDSSQDTLTEQ 737
S ++ +S + +++ + S + +++SS SS+++ +++
Sbjct: 2155 SCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDE 2200
>gi|4557565 excision repair cross-complementing rodent repair
deficiency, complementation group 6 [Homo sapiens]
Length = 1493
Score = 136 bits (343), Expect = 3e-31
Identities = 129/511 (25%), Positives = 218/511 (42%), Gaps = 50/511 (9%)
Query: 852 EIKLRVELEEKRKKALNLQKVSRRGKELRPKGFDALQESSLDSGMSGRKRKASISLTDDE 911
E +L+ +++ +K+AL Q K RP D E+ DS ++ T++E
Sbjct: 325 EERLKKHIKKLQKRALQFQGKVGLPKARRPWESDMRPEAEGDS----EGEESEYFPTEEE 380
Query: 912 VDDEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLMKLYEGAFLPSSQWPRPKPDGE 971
++E++ +E EA+ EL L K + ++ + F PSS GE
Sbjct: 381 EEEEDDEVEGAEADLSGDGTDYELKPLPKGGKRQKKVPVQEIDDDFFPSS--------GE 432
Query: 972 DTSGEEDADDCPGDRESRKDLVLIDSLFIMDQFKAAERMNI-GKPNAKDIADVTAVAEAI 1030
+ + G R+ + D + + + ++ + K + D + ++A
Sbjct: 433 EAEAASVGEGGGGGRKVGRYRDDGDEDYYKQRLRRWNKLRLQDKEKRLKLEDDSEESDAE 492
Query: 1031 LPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQII 1090
+G F P L+ L YQ+ G+ WL +L+ + GIL DE GLGKT+QII
Sbjct: 493 FDEG---------FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQII 543
Query: 1091 AFFAHLACNE-----GNW-----GPHLVVVRSCNILKWELELKRWCPGLK--ILSYIGSH 1138
AF A L+ ++ N+ GP ++V + + +W E W P + IL GS+
Sbjct: 544 AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSY 603
Query: 1139 RELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAV 1198
K K + + ITSY+ +R W +++DE +++ A
Sbjct: 604 THKKEKLIR-DVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLAC 662
Query: 1199 FTLQSQQRLLLIDSPLHNTFLELWTMVHFLVPG-----------ISRPYLSSPLRAPSEE 1247
++ R++L SP+ N ELW++ F+ PG S P S
Sbjct: 663 KQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPV 722
Query: 1248 SQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLT--KKYEHVLKCRLSNRQKALYEDVILQ 1305
+K L P++LRR K DV+ L+ K E VL CRL++ Q +Y++ +
Sbjct: 723 QVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDS 782
Query: 1306 PGTQEALKSGHFVNVLSILVRLQRICNHPGL 1336
L + + S L+ L++ICNHP L
Sbjct: 783 KEVYRILNGE--MQIFSGLIALRKICNHPDL 811
Score = 104 bits (260), Expect = 1e-21
Identities = 62/173 (35%), Positives = 91/173 (52%)
Query: 1860 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1919
SGK+ + LL+ +G+RVL+ SQ MLDILE+FL TY+++D + RQ L
Sbjct: 838 SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPL 897
Query: 1920 MRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDI 1979
+ +N D IF +L+T G+NL A+ VV YD D NP D +A+E RIG+ K +
Sbjct: 898 ITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQV 957
Query: 1980 HIYRLVSGNSIEEKLLKNGTKDLIREVAAQGNDYSMAFLTQRTIQELFEVYSP 2032
+YRL++ +IEEK+ + F + ELF + SP
Sbjct: 958 TVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSP 1010
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,418,532
Number of Sequences: 37866
Number of extensions: 8826318
Number of successful extensions: 182767
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 2112
Number of HSP's that attempted gapping in prelim test: 57838
Number of HSP's gapped (non-prelim): 67678
length of query: 3122
length of database: 18,247,518
effective HSP length: 121
effective length of query: 3001
effective length of database: 13,665,732
effective search space: 41010861732
effective search space used: 41010861732
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.