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Search of human proteins with 56243551
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56243551 steroidogenic acute regulatory protein isoform 1
[Homo sapiens]
(285 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56243551 steroidogenic acute regulatory protein isoform 1 [Ho... 570 e-163
gi|56117848 steroidogenic acute regulatory protein isoform 2 [Ho... 525 e-149
gi|31543657 StAR-related lipid transfer (START) domain containin... 147 8e-36
gi|21040261 START domain containing protein 6 [Homo sapiens] 78 1e-14
gi|32526915 StAR-related lipid transfer protein 5 [Homo sapiens] 70 2e-12
gi|21040247 StAR-related lipid transfer (START) domain containin... 52 8e-07
gi|116812600 START domain containing 10 [Homo sapiens] 38 0.012
gi|41281907 StAR-related lipid transfer (START) domain containin... 36 0.034
gi|16445031 StAR-related lipid transfer (START) domain containin... 36 0.034
gi|41281898 StAR-related lipid transfer (START) domain containin... 36 0.034
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma... 33 0.22
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma... 33 0.22
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma... 33 0.22
gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens] 32 0.83
gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens] 32 0.83
gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens] 32 0.83
gi|24430139 RNA polymerase II associated protein 1 [Homo sapiens] 30 3.2
gi|17149828 NMDA receptor regulated 1 [Homo sapiens] 29 4.1
gi|187475373 c-src tyrosine kinase [Homo sapiens] 29 5.4
gi|4758078 c-src tyrosine kinase [Homo sapiens] 29 5.4
gi|189027048 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens] 29 5.4
gi|189027046 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens] 29 5.4
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom... 28 7.0
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom... 28 7.0
gi|197333811 URB2 ribosome biogenesis 2 homolog [Homo sapiens] 28 7.0
gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens] 28 7.0
gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens] 28 7.0
gi|28827795 chromatin modifying protein 4B [Homo sapiens] 28 9.2
>gi|56243551 steroidogenic acute regulatory protein isoform 1 [Homo
sapiens]
Length = 285
Score = 570 bits (1470), Expect = e-163
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG 60
MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG
Sbjct: 1 MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG 60
Query: 61 SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF 120
SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF
Sbjct: 61 SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF 120
Query: 121 RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVG 180
RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVG
Sbjct: 121 RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVG 180
Query: 181 PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT 240
PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT
Sbjct: 181 PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT 240
Query: 241 WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC 285
WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC
Sbjct: 241 WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC 285
>gi|56117848 steroidogenic acute regulatory protein isoform 2 [Homo
sapiens]
Length = 267
Score = 525 bits (1352), Expect = e-149
Identities = 267/285 (93%), Positives = 267/285 (93%), Gaps = 18/285 (6%)
Query: 1 MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG 60
MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG
Sbjct: 1 MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG 60
Query: 61 SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF 120
SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF
Sbjct: 61 SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF 120
Query: 121 RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVG 180
RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIG G
Sbjct: 121 RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIG------------------G 162
Query: 181 PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT 240
PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT
Sbjct: 163 PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT 222
Query: 241 WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC 285
WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC
Sbjct: 223 WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC 267
>gi|31543657 StAR-related lipid transfer (START) domain containing 3
[Homo sapiens]
Length = 445
Score = 147 bits (372), Expect = 8e-36
Identities = 78/208 (37%), Positives = 123/208 (59%)
Query: 68 YSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVD 127
+S QE Y++QG+EA IL+ +E WK E + GD V + VP GK F L+ +
Sbjct: 231 FSAQEREYIRQGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLP 290
Query: 128 QPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSV 187
P E +Y+E++ + E M WN V ++LQ++ +T I+++++A AAG +V PRDFV+V
Sbjct: 291 CPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNV 350
Query: 188 RCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDL 247
R +RR + +G+AT P +R E+GP ++ A +P W+L+ DL
Sbjct: 351 RRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDL 410
Query: 248 KGWLPKSIINQVLSQTQVDFANHLRKRL 275
KG LP+ +I+Q L+ T +FA HLR+R+
Sbjct: 411 KGRLPRYLIHQSLAATMFEFAFHLRQRI 438
>gi|21040261 START domain containing protein 6 [Homo sapiens]
Length = 220
Score = 77.8 bits (190), Expect = 1e-14
Identities = 49/208 (23%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 80 EEAMQKALGILSNQEGWK--KESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEEL 137
++ Q+ LG + GWK K S++ S+ G ++R+E ++ + +L + L
Sbjct: 8 QQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFH--GNLYRVEGIIPESPAKLSDFL 65
Query: 138 VERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKR-RGST 196
+ + + W+ +++ ++ +I DTFI H + A + PRDF+ + KR G+
Sbjct: 66 YQTGDRI-TWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRYEGNM 124
Query: 197 CVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPKSII 256
+++ + DF P IR + P V P+ +P+ +KL + +++G L SII
Sbjct: 125 NIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLSPSII 184
Query: 257 NQVLSQTQVDFANHLRKRLESHPASEAR 284
+ + V+F + + +++H R
Sbjct: 185 EKTMPSNLVNFILNAKDGIKAHRTPSRR 212
>gi|32526915 StAR-related lipid transfer protein 5 [Homo sapiens]
Length = 213
Score = 70.1 bits (170), Expect = 2e-12
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
Query: 77 QQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKV-VPDVGKVFRLEVVVDQPMERLYE 135
Q E +K L + GWK ++ NG V + V G ++R E +V +E +++
Sbjct: 8 QMSEAVAEKMLQYRRDTAGWKI-CREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWD 66
Query: 136 ELVERMEAMG-EWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKRRG 194
+ + + +W+ NV +++Q I ++ AA L+ PRDFV + KR
Sbjct: 67 CVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYE 126
Query: 195 STCVLAGMA-TDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPK 253
+ + + P + G +R + P PL G P+KT L DL G+LP+
Sbjct: 127 DGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQ 186
Query: 254 SIINQVLSQTQVDFANHLRKRLE 276
++++ ++ F +L+K ++
Sbjct: 187 NVVDSFFPRSMTRFYANLQKAVK 209
>gi|21040247 StAR-related lipid transfer (START) domain containing 4
[Homo sapiens]
Length = 205
Score = 51.6 bits (122), Expect = 8e-07
Identities = 35/180 (19%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 96 WKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIK 155
W+K S++ NG +++ + V+D + + + + +W+ + +
Sbjct: 41 WRKPSEEFNG------------YLYKAQGVIDDLVYSIIDH-IRPGPCRLDWDSLMTSLD 87
Query: 156 VLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGV 215
+L+ ++ + A N++ PR+FV + G++ D+ ++
Sbjct: 88 ILENFEENCCVMRYTTAGQLWNIISPREFVDFSYTVGYKEGLLSCGISLDWDE--KRPEF 145
Query: 216 IRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRL 275
+R + P PL +P+++ LT + DL+G +P+S ++ ++ T +F LRK L
Sbjct: 146 VRGYNHPCGWFCVPLKDNPNQSLLTGYIQTDLRGMIPQSAVDTAMASTLTNFYGDLRKAL 205
>gi|116812600 START domain containing 10 [Homo sapiens]
Length = 291
Score = 37.7 bits (86), Expect = 0.012
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 127 DQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVS 186
D P E LY+ L + +E +W+ NV E + ++ + + + + + RD ++
Sbjct: 76 DVPAETLYDVLHD-IEYRKKWDSNVIETFDIARLTVNADVGYY--SWRCPKPLKNRDVIT 132
Query: 187 VRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSID 246
+R G+ ++ + P +K ++RA T ++ + P +T+L +D
Sbjct: 133 LRSWLPMGADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLIQ--STGPKSCVITYLAQVD 190
Query: 247 LKGWLPKSIINQ 258
KG LPK ++N+
Sbjct: 191 PKGSLPKWVVNK 202
>gi|41281907 StAR-related lipid transfer (START) domain containing 13
isoform beta [Homo sapiens]
Length = 1105
Score = 36.2 bits (82), Expect = 0.034
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 59 LGSRLEETLYSDQE-LAYLQQG--EEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVP- 114
LG++LEE+ + L +L QG +EA +K +GW S DN D KV
Sbjct: 887 LGTQLEESGATFHTYLNHLIQGLQKEAKEKF-------KGWVTCSSTDNTDLAFKKVGDG 939
Query: 115 DVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEA 174
+ K+++ V V+ P + ++ W+ + + KV++ + + T I +
Sbjct: 940 NPLKLWKASVEVEAPPSVVLNRVLRERHL---WDEDFVQWKVVETLDRQTEIYQYVLNSM 996
Query: 175 AGNLVGPRDFVSVRCAKRR--GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAG 232
A + RDFV +R K C L ++ + + G +RA + ++ P
Sbjct: 997 APH--PSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEA-QLLGGVRAVVMDSQYLIEPCGS 1053
Query: 233 SPSKTKLTWLLSIDLKGWLPK 253
K++LT + IDLKG P+
Sbjct: 1054 G--KSRLTHICRIDLKGHSPE 1072
>gi|16445031 StAR-related lipid transfer (START) domain containing
13 isoform gamma [Homo sapiens]
Length = 995
Score = 36.2 bits (82), Expect = 0.034
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 59 LGSRLEETLYSDQE-LAYLQQG--EEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVP- 114
LG++LEE+ + L +L QG +EA +K +GW S DN D KV
Sbjct: 777 LGTQLEESGATFHTYLNHLIQGLQKEAKEKF-------KGWVTCSSTDNTDLAFKKVGDG 829
Query: 115 DVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEA 174
+ K+++ V V+ P + ++ W+ + + KV++ + + T I +
Sbjct: 830 NPLKLWKASVEVEAPPSVVLNRVLRERHL---WDEDFVQWKVVETLDRQTEIYQYVLNSM 886
Query: 175 AGNLVGPRDFVSVRCAKRR--GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAG 232
A + RDFV +R K C L ++ + + G +RA + ++ P
Sbjct: 887 APH--PSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEA-QLLGGVRAVVMDSQYLIEPCGS 943
Query: 233 SPSKTKLTWLLSIDLKGWLPK 253
K++LT + IDLKG P+
Sbjct: 944 G--KSRLTHICRIDLKGHSPE 962
>gi|41281898 StAR-related lipid transfer (START) domain containing 13
isoform alpha [Homo sapiens]
Length = 1113
Score = 36.2 bits (82), Expect = 0.034
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 59 LGSRLEETLYSDQE-LAYLQQG--EEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVP- 114
LG++LEE+ + L +L QG +EA +K +GW S DN D KV
Sbjct: 895 LGTQLEESGATFHTYLNHLIQGLQKEAKEKF-------KGWVTCSSTDNTDLAFKKVGDG 947
Query: 115 DVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEA 174
+ K+++ V V+ P + ++ W+ + + KV++ + + T I +
Sbjct: 948 NPLKLWKASVEVEAPPSVVLNRVLRERHL---WDEDFVQWKVVETLDRQTEIYQYVLNSM 1004
Query: 175 AGNLVGPRDFVSVRCAKRR--GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAG 232
A + RDFV +R K C L ++ + + G +RA + ++ P
Sbjct: 1005 APH--PSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEA-QLLGGVRAVVMDSQYLIEPCGS 1061
Query: 233 SPSKTKLTWLLSIDLKGWLPK 253
K++LT + IDLKG P+
Sbjct: 1062 G--KSRLTHICRIDLKGHSPE 1080
>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 33.5 bits (75), Expect = 0.22
Identities = 31/155 (20%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 95 GWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEI 154
GW + ++ ++ KV F VV QP+ R++ + + + P ++
Sbjct: 4432 GWNYQGEEQ-AVQLYYKVFSPTRHGFLGAGVVSQPLSRVWAAVSDPTVWPLYYKP-IQTA 4489
Query: 155 KVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKRRGSTCVLAGMATDFGNMPE-QK 213
++ Q++ + + + L PRDF V + G V+A + +MP +
Sbjct: 4490 RLHQRVTNSISLVYLVCNTTLCALKQPRDFCCVCVEAKEGHLSVMAAQSVYDTSMPRPSR 4549
Query: 214 GVIRAEHGPTCMVLHPLAGSPSK-TKLTWLLSIDL 247
++R E P+ +L P+ + T++ +L ++L
Sbjct: 4550 KMVRGEILPSAWILQPITVEGKEVTRVIYLAQVEL 4584
>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 33.5 bits (75), Expect = 0.22
Identities = 31/155 (20%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 95 GWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEI 154
GW + ++ ++ KV F VV QP+ R++ + + + P ++
Sbjct: 4432 GWNYQGEEQ-AVQLYYKVFSPTRHGFLGAGVVSQPLSRVWAAVSDPTVWPLYYKP-IQTA 4489
Query: 155 KVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKRRGSTCVLAGMATDFGNMPE-QK 213
++ Q++ + + + L PRDF V + G V+A + +MP +
Sbjct: 4490 RLHQRVTNSISLVYLVCNTTLCALKQPRDFCCVCVEAKEGHLSVMAAQSVYDTSMPRPSR 4549
Query: 214 GVIRAEHGPTCMVLHPLAGSPSK-TKLTWLLSIDL 247
++R E P+ +L P+ + T++ +L ++L
Sbjct: 4550 KMVRGEILPSAWILQPITVEGKEVTRVIYLAQVEL 4584
>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 33.5 bits (75), Expect = 0.22
Identities = 31/155 (20%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 95 GWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEI 154
GW + ++ ++ KV F VV QP+ R++ + + + P ++
Sbjct: 4432 GWNYQGEEQ-AVQLYYKVFSPTRHGFLGAGVVSQPLSRVWAAVSDPTVWPLYYKP-IQTA 4489
Query: 155 KVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKRRGSTCVLAGMATDFGNMPE-QK 213
++ Q++ + + + L PRDF V + G V+A + +MP +
Sbjct: 4490 RLHQRVTNSISLVYLVCNTTLCALKQPRDFCCVCVEAKEGHLSVMAAQSVYDTSMPRPSR 4549
Query: 214 GVIRAEHGPTCMVLHPLAGSPSK-TKLTWLLSIDL 247
++R E P+ +L P+ + T++ +L ++L
Sbjct: 4550 KMVRGEILPSAWILQPITVEGKEVTRVIYLAQVEL 4584
>gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens]
Length = 4314
Score = 31.6 bits (70), Expect = 0.83
Identities = 23/122 (18%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 42 GPTPSTWINQVRRRSSLLGSRLEETLYSDQELAYLQQGEEAMQKALGIL------SNQEG 95
G TPS ++ + S++ S+ +E L + ++LQ G + +A ++ + ++
Sbjct: 2866 GATPSRYMTFLHVYSAISSSKKKELL---KRQSHLQAGVSKLNEAKALVDELNRKAGEQS 2922
Query: 96 WKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIK 155
+++QD D + + + + +++ R+ EE+V+ E + + +KE++
Sbjct: 2923 VLLKTKQDEADAALQMITVSMQDASEQKTELERLKHRIAEEVVKIEERKNKIDDELKEVQ 2982
Query: 156 VL 157
L
Sbjct: 2983 PL 2984
>gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens]
Length = 1528
Score = 31.6 bits (70), Expect = 0.83
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 94 EGWKKESQQDNGDKVMSKVVPDVGKVFRL-EVVVDQPMERLYEELVERM-EAMGEWNPNV 151
+GW S + + KV G RL V++ P + EE+++R+ + W+ ++
Sbjct: 1341 KGWVSYSTSEQAELSYKKV--SEGPPLRLWRSVIEVPA--VPEEILKRLLKEQHLWDVDL 1396
Query: 152 KEIKVLQKIGKDT----FITHELAAEAAGNLVGPRDFVSVRCAKRR--GSTCVLAGMATD 205
+ KV++ + T ++ + +A A RD+V +R + C L + D
Sbjct: 1397 LDSKVIEILDSQTEIYQYVQNSMAPHPA------RDYVVLRTWRTNLPKGACALLLTSVD 1450
Query: 206 FGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPK 253
P +R + ++ P P K+KLT++ +DL+G +P+
Sbjct: 1451 HDRAPVVG--VRVNVLLSRYLIEPCG--PGKSKLTYMCRVDLRGHMPE 1494
>gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens]
Length = 1091
Score = 31.6 bits (70), Expect = 0.83
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 94 EGWKKESQQDNGDKVMSKVVPDVGKVFRL-EVVVDQPMERLYEELVERM-EAMGEWNPNV 151
+GW S + + KV G RL V++ P + EE+++R+ + W+ ++
Sbjct: 904 KGWVSYSTSEQAELSYKKV--SEGPPLRLWRSVIEVPA--VPEEILKRLLKEQHLWDVDL 959
Query: 152 KEIKVLQKIGKDT----FITHELAAEAAGNLVGPRDFVSVRCAKRR--GSTCVLAGMATD 205
+ KV++ + T ++ + +A A RD+V +R + C L + D
Sbjct: 960 LDSKVIEILDSQTEIYQYVQNSMAPHPA------RDYVVLRTWRTNLPKGACALLLTSVD 1013
Query: 206 FGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWLPK 253
P +R + ++ P P K+KLT++ +DL+G +P+
Sbjct: 1014 HDRAPVVG--VRVNVLLSRYLIEPCG--PGKSKLTYMCRVDLRGHMPE 1057
>gi|24430139 RNA polymerase II associated protein 1 [Homo sapiens]
Length = 1393
Score = 29.6 bits (65), Expect = 3.2
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 60 GSRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVP---DV 116
G E YS QEL +L + + + Q+AL + + + + GD++ V+ D
Sbjct: 382 GEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISRAQAGEFGDRLAGSVLSLLLDA 441
Query: 117 GKVFRLEVVVDQPMERLYEELVERMEAM 144
G +F L +D ++ + + + A+
Sbjct: 442 GFLFLLRFSLDDRVDGVIATAIRALRAL 469
>gi|17149828 NMDA receptor regulated 1 [Homo sapiens]
Length = 866
Score = 29.3 bits (64), Expect = 4.1
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 12/105 (11%)
Query: 69 SDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQ 128
SD+EL L+ + QK I ++ +KE QQ N K ++G
Sbjct: 588 SDKELKKLRNKQRRAQKKAQIEEEKKNAEKEKQQRNQKKKKDDDDEEIG----------G 637
Query: 129 PMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAE 173
P E L E + ++E E +K + L+ + K+ TH A E
Sbjct: 638 PKEELIPEKLAKVETPLE--EAIKFLTPLKNLVKNKIETHLFAFE 680
>gi|187475373 c-src tyrosine kinase [Homo sapiens]
Length = 450
Score = 28.9 bits (63), Expect = 5.4
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 147 WNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKRRGSTCVLAGMAT-- 204
W N+KE+K+LQ IGK F + + GN V+V+C K + A+
Sbjct: 188 WALNMKELKLLQTIGKGEF-GDVMLGDYRGNK------VAVKCIKNDATAQAFLAEASVM 240
Query: 205 ---DFGNMPEQKGVIRAEHGPTCMVLHPLA 231
N+ + GVI E G +V +A
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270
>gi|4758078 c-src tyrosine kinase [Homo sapiens]
Length = 450
Score = 28.9 bits (63), Expect = 5.4
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 147 WNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKRRGSTCVLAGMAT-- 204
W N+KE+K+LQ IGK F + + GN V+V+C K + A+
Sbjct: 188 WALNMKELKLLQTIGKGEF-GDVMLGDYRGNK------VAVKCIKNDATAQAFLAEASVM 240
Query: 205 ---DFGNMPEQKGVIRAEHGPTCMVLHPLA 231
N+ + GVI E G +V +A
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270
>gi|189027048 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens]
Length = 643
Score = 28.9 bits (63), Expect = 5.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 62 RLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKK 98
R EE L DQ+L +LQQ + MQ+ L + + KK
Sbjct: 459 RTEENLTKDQQLQFLQQTMQGMQQQLLTIQEELNNKK 495
>gi|189027046 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens]
Length = 643
Score = 28.9 bits (63), Expect = 5.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 62 RLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKK 98
R EE L DQ+L +LQQ + MQ+ L + + KK
Sbjct: 459 RTEENLTKDQQLQFLQQTMQGMQQQLLTIQEELNNKK 495
>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
sapiens]
Length = 1133
Score = 28.5 bits (62), Expect = 7.0
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 33 QELNRRALGGPTPSTWINQVRRRSSLLGSRLEETLY------SDQELAYLQQGEEAMQKA 86
+E RR LG + + RR ++L E+ + SD+ + L+Q E ++K
Sbjct: 151 KESYRRILG----QLLVAEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECERLKK- 205
Query: 87 LGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGE 146
L +QE +E ++ +K ++ + ++ K+ ++V +RL +L + + + E
Sbjct: 206 ---LIDQEIKSQEEKEQEKEKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQE 262
Query: 147 WNPNVKE 153
N KE
Sbjct: 263 LTTNAKE 269
>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
sapiens]
Length = 1135
Score = 28.5 bits (62), Expect = 7.0
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 33 QELNRRALGGPTPSTWINQVRRRSSLLGSRLEETLY------SDQELAYLQQGEEAMQKA 86
+E RR LG + + RR ++L E+ + SD+ + L+Q E ++K
Sbjct: 151 KESYRRILG----QLLVAEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECERLKK- 205
Query: 87 LGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGE 146
L +QE +E ++ +K ++ + ++ K+ ++V +RL +L + + + E
Sbjct: 206 ---LIDQEIKSQEEKEQEKEKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQE 262
Query: 147 WNPNVKE 153
N KE
Sbjct: 263 LTTNAKE 269
>gi|197333811 URB2 ribosome biogenesis 2 homolog [Homo sapiens]
Length = 1524
Score = 28.5 bits (62), Expect = 7.0
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 130 MERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRC 189
MER+ ELV+ + A+ P + LQK+ + A+ S+ C
Sbjct: 572 MERMMRELVQPLLALLPDTPGPEPELWLQKVSDSVLLLSYTWAQVDA-------MFSLNC 624
Query: 190 AKRRGSTCVLAGMATDFGNMPEQKGVIRAEH 220
++ + L G+A + N+P ++ +H
Sbjct: 625 SQYHSMSGPLIGVALEISNLPSLLPGVKTQH 655
>gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]
Length = 1194
Score = 28.5 bits (62), Expect = 7.0
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 51 QVRRRSSLLGSRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMS 110
Q+ +R + L E ++ L L+ E + L Q ++E D+ +K +S
Sbjct: 377 QLAQRVAALNKAEERHGNFEERLRQLEAQLEEKNQEL-----QRARQREKMNDDHNKRLS 431
Query: 111 KVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHE 169
+ V + ++ + ERL L ERM A+ E N +EI ++K+ + + E
Sbjct: 432 ETV---------DKLLSESNERLQLHLKERMGALEEKNSLSEEIANMKKLQDELLLNKE 481
>gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]
Length = 1257
Score = 28.5 bits (62), Expect = 7.0
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 51 QVRRRSSLLGSRLEETLYSD-----------QELAYLQQGEEAMQKALGILSNQEGWKKE 99
Q++ R L +L++T+ Q +A L + EE + + EG +E
Sbjct: 384 QLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443
Query: 100 SQQD-NGDKVMSKVVPDVGKVFRLEVVVDQPM----ERLYEELVERMEAMGEWNPNVKEI 154
Q+ + K+ + K RL VD+ + ERL L ERM A+ E N ++E
Sbjct: 444 KNQELQRARQREKMNEEHNK--RLSDTVDRLLTESNERLQLHLKERMAALEEKNVLIQES 501
Query: 155 KVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVR 188
+ +K +++ E AE L D + +R
Sbjct: 502 ETFRKNLEESLHDKERLAEEIEKLRSELDQLKMR 535
>gi|28827795 chromatin modifying protein 4B [Homo sapiens]
Length = 224
Score = 28.1 bits (61), Expect = 9.2
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 41 GGPTPSTWINQVRRRSSLLGSRLE--ETLYSDQELAYLQQGEEAMQKALGILSNQEGWKK 98
GGPTP I ++R +L + E E + A + G + + AL L ++ ++K
Sbjct: 18 GGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKRAALQALKRKKRYEK 77
Query: 99 ESQQDNG 105
+ Q +G
Sbjct: 78 QLAQIDG 84
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,560,267
Number of Sequences: 37866
Number of extensions: 448974
Number of successful extensions: 1177
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1164
Number of HSP's gapped (non-prelim): 29
length of query: 285
length of database: 18,247,518
effective HSP length: 101
effective length of query: 184
effective length of database: 14,423,052
effective search space: 2653841568
effective search space used: 2653841568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.