Guide to the Human Genome
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Name: STARD3 Sequence: fasta or formatted (445aa) NCBI GI: 31543657
Description:

StAR-related lipid transfer (START) domain containing 3

Referenced in:

Additional Membrane Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         35           2
 C cysteine            0.9          4           1
 D aspartate           3.1         14           1
 E glutamate           7.4         33           3
 F phenylalanine       6.7         30           2
 G glycine             5.2         23           2
 H histidine           1.8          8           1
 I isoleucine          5.6         25           2
 K lysine              4.3         19           2
 L leucine            12.1         54           3
 M methionine          0.7          3           1
 N asparagine          3.1         14           2
 P proline             4.5         20           3
 Q glutamine           3.6         16           1
 R arginine            7.0         31           3
 S serine              8.5         38           2
 T threonine           4.9         22           2
 V valine              7.6         34           2
 W tryptophan          2.0          9           2
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   StAR-related lipid transfer (START) domain containin... 
STARD3NL              0.267   MLN64 N-terminal homolog 
STAR                  0.142   steroidogenic acute regulatory protein isoform 1 [Ho...
STAR                  0.114   steroidogenic acute regulatory protein isoform 2 [Ho...
STARD6                0.062   START domain containing protein 6 
STARD4                0.051   StAR-related lipid transfer (START) domain containin...
STARD5                0.051   StAR-related lipid transfer protein 5 
ACOT11                0.019   thioesterase, adipose associated isoform BFIT1 [Homo...
STARD10               0.018   START domain containing 10 
ACOT11                0.013   thioesterase, adipose associated isoform BFIT2 [Homo...
STK11IP               0.007   LKB1 interacting protein 
RASIP1                0.006   Ras-interacting protein 1 
KIAA0774              0.006   hypothetical protein LOC23281 isoform a 
ZDHHC13               0.006   zinc finger, DHHC domain containing 13 isoform 2 [Ho...
ZDHHC13               0.006   zinc finger, DHHC domain containing 13 isoform 1 [Ho...
BSN                   0.006   bassoon protein 
SLC7A14               0.006   solute carrier family 7 (cationic amino acid transp...
THEG                  0.005   Theg homolog isoform 2 
THEG                  0.005   Theg homolog isoform 1 
STARD9                0.005   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.005   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.005   PREDICTED: StAR-related lipid transfer (START) doma...
C9orf102              0.005   RAD26L hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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