Guide to the Human Genome
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Name: STAR Sequence: fasta or formatted (267aa) NCBI GI: 56117848
Description:

steroidogenic acute regulatory protein isoform 2

Referenced in:

Adrenals
Nuclear Receptors

Other entries for this name:
alt prot [285aa] steroidogenic acute regulatory protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         17           1
 C cysteine            1.9          5           1
 D aspartate           3.4          9           1
 E glutamate           7.5         20           2
 F phenylalanine       1.9          5           1
 G glycine             7.5         20           2
 H histidine           1.9          5           1
 I isoleucine          3.4          9           2
 K lysine              6.7         18           2
 L leucine            10.9         29           2
 M methionine          4.5         12           1
 N asparagine          3.7         10           1
 P proline             4.5         12           1
 Q glutamine           6.4         17           2
 R arginine            7.5         20           3
 S serine              7.5         20           2
 T threonine           3.7         10           1
 V valine              7.5         20           3
 W tryptophan          1.9          5           1
 Y tyrosine            1.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   steroidogenic acute regulatory protein isoform 2 [Ho... 
STAR                  0.978   steroidogenic acute regulatory protein isoform 1 [Ho...
STARD3                0.192   StAR-related lipid transfer (START) domain containin...
STARD5                0.063   StAR-related lipid transfer protein 5 
STARD6                0.061   START domain containing protein 6 
STARD4                0.041   StAR-related lipid transfer (START) domain containin...
STARD10               0.023   START domain containing 10 
DYNC2H1               0.014   dynein, cytoplasmic 2, heavy chain 1 
RPAP1                 0.010   RNA polymerase II associated protein 1 
STARD9                0.008   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.008   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.008   PREDICTED: StAR-related lipid transfer (START) doma...
STARD13               0.008   StAR-related lipid transfer (START) domain containin...
STARD13               0.008   StAR-related lipid transfer (START) domain containin...
STARD13               0.008   StAR-related lipid transfer (START) domain containin...
ENOX1                 0.008   ecto-NOX disulfide-thiol exchanger 1 
ENOX1                 0.008   ecto-NOX disulfide-thiol exchanger 1 
FILIP1L               0.006   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.006   filamin A interacting protein 1-like isoform 1 [Hom...
CHMP4B                0.006   chromatin modifying protein 4B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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