Guide to the Human Genome
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Name: STARD4 Sequence: fasta or formatted (205aa) NCBI GI: 21040247
Description:

StAR-related lipid transfer (START) domain containing 4

Referenced in:

Cholesterol Biosynthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4          9           1
 C cysteine            2.9          6           2
 D aspartate           7.8         16           2
 E glutamate           5.9         12           2
 F phenylalanine       3.9          8           1
 G glycine             6.3         13           1
 H histidine           1.5          3           1
 I isoleucine          5.9         12           2
 K lysine              5.9         12           2
 L leucine             9.8         20           2
 M methionine          2.4          5           1
 N asparagine          4.4          9           1
 P proline             4.4          9           1
 Q glutamine           2.9          6           1
 R arginine            4.9         10           1
 S serine              6.8         14           1
 T threonine           6.3         13           2
 V valine              5.9         12           1
 W tryptophan          2.9          6           1
 Y tyrosine            4.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   StAR-related lipid transfer (START) domain containin... 
STARD5                0.263   StAR-related lipid transfer protein 5 
STARD6                0.214   START domain containing protein 6 
STARD3                0.108   StAR-related lipid transfer (START) domain containin...
STAR                  0.066   steroidogenic acute regulatory protein isoform 1 [Ho...
STAR                  0.052   steroidogenic acute regulatory protein isoform 2 [Ho...
STARD7                0.020   START domain containing 7 
PCTP                  0.010   phosphatidylcholine transfer protein isoform 1 [Hom...
ARHGEF6               0.010   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
LOC100293409          0.005   PREDICTED: similar to Mucin-19 
LOC100291118          0.005   PREDICTED: hypothetical protein XP_002347351 
LOC100287737          0.005   PREDICTED: hypothetical protein XP_002343203 
NUAK1                 0.005   AMPK-related protein kinase 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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