Guide to the Human Genome
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Name: RACGAP1 Sequence: fasta or formatted (632aa) NCBI GI: 21361397
Description:

Rac GTPase activating protein 1

Referenced in:

Rho and Rac

Other entries for this name:
alt mRNA [632aa] Rac GTPase activating protein 1
alt mRNA [632aa] Rac GTPase activating protein 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         30           2
 C cysteine            1.9         12           1
 D aspartate           5.7         36           2
 E glutamate           6.6         42           2
 F phenylalanine       3.5         22           2
 G glycine             4.7         30           2
 H histidine           1.7         11           1
 I isoleucine          5.1         32           1
 K lysine              7.3         46           2
 L leucine             9.8         62           2
 M methionine          2.7         17           2
 N asparagine          4.0         25           1
 P proline             5.9         37           2
 Q glutamine           4.7         30           1
 R arginine            7.1         45           2
 S serine              8.9         56           4
 T threonine           7.0         44           2
 V valine              7.1         45           2
 W tryptophan          0.8          5           1
 Y tyrosine            0.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rac GTPase activating protein 1 
RACGAP1               1.000   Rac GTPase activating protein 1 
RACGAP1               1.000   Rac GTPase activating protein 1 
CHN1                  0.081   chimerin (chimaerin) 1 isoform a 
CHN1                  0.079   chimerin (chimaerin) 1 isoform b 
MYO9B                 0.076   myosin IXB isoform 2 
MYO9B                 0.076   myosin IXB isoform 1 
CHN2                  0.072   beta chimerin isoform 2 
CHN2                  0.072   beta chimerin isoform 1 
ABR                   0.066   active breakpoint cluster region-related  protein i...
ABR                   0.066   active breakpoint cluster region-related  protein is...
ABR                   0.066   active breakpoint cluster region-related  protein is...
ARHGAP26              0.063   GTPase regulator associated with the focal adhesion...
ARHGAP26              0.063   GTPase regulator associated with the focal adhesion k...
ARHGAP10              0.061   Rho GTPase activating protein 10 
ARHGAP22              0.061   Rho GTPase activating protein 2 
MYO9A                 0.060   myosin IXA 
BCR                   0.059   breakpoint cluster region isoform 2 
BCR                   0.059   breakpoint cluster region isoform 1 
ARHGAP21              0.059   Rho GTPase activating protein 21 
FLJ32810              0.057   Rho-type GTPase-activating protein FLJ32810 
ARHGAP23              0.056   Rho GTPase activating protein 23 
HMHA1                 0.056   minor histocompatibility antigen HA-1 
ARHGAP29              0.056   PTPL1-associated RhoGAP 1 
ARHGAP24              0.055   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.055   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.055   Rho GTPase activating protein 24 isoform 1 
ARHGAP27              0.055   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.055   Rho GTPase activating protein 27 isoform a 
OPHN1                 0.055   oligophrenin 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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