| Name: APCS | Sequence: fasta or formatted (223aa) | NCBI GI: 4502133 | |
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Description: serum amyloid P component precursor
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Referenced in: Additional Host Defense Functions
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.5 10 1 C cysteine 0.9 2 1 D aspartate 4.0 9 1 E glutamate 6.3 14 1 F phenylalanine 4.9 11 1 G glycine 6.7 15 2 H histidine 1.8 4 1 I isoleucine 6.3 14 2 K lysine 5.4 12 2 L leucine 11.2 25 2 M methionine 0.9 2 1 N asparagine 4.0 9 1 P proline 5.8 13 2 Q glutamine 4.0 9 1 R arginine 4.0 9 1 S serine 8.5 19 3 T threonine 4.0 9 1 V valine 8.5 19 1 W tryptophan 2.7 6 1 Y tyrosine 5.4 12 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 serum amyloid P component precursor CRP 0.480 C-reactive protein, pentraxin-related LOC649458 0.319 PREDICTED: similar to hCG2036669 LOC649458 0.319 PREDICTED: similar to hCG2036669 LOC649458 0.319 PREDICTED: hypothetical protein LOC649458 C16orf38 0.129 hypothetical protein LOC390667 NPTX2 0.125 neuronal pentraxin II NPTXR 0.113 neuronal pentraxin receptor NPTX1 0.111 neuronal pentraxin I precursor SVEP1 0.095 polydom PTX3 0.085 pentraxin 3 GPR144 0.062 G protein-coupled receptor 144 GPR112 0.012 G-protein coupled receptor 112 DNAH6 0.012 dynein, axonemal, heavy polypeptide 6 TRAK2 0.009 trafficking protein, kinesin binding 2 TTN 0.007 titin isoform novex-3Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
