Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 55743092
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55743092 aristaless-like homeobox 4 [Homo sapiens]
(411 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55743092 aristaless-like homeobox 4 [Homo sapiens] 843 0.0
gi|154813201 cartilage paired-class homeoprotein 1 [Homo sapiens] 232 5e-61
gi|113204604 aristaless-like homeobox 3 [Homo sapiens] 206 4e-53
gi|24497589 aristaless related homeobox [Homo sapiens] 139 5e-33
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 125 5e-29
gi|122937484 dorsal root ganglia homeobox [Homo sapiens] 122 8e-28
gi|152963644 paired-like homeodomain transcription factor 1 [Hom... 115 6e-26
gi|34365783 visual system homeobox 2 [Homo sapiens] 115 7e-26
gi|21361183 paired-like homeodomain transcription factor 2 isofo... 112 8e-25
gi|24234711 paired-like homeodomain transcription factor 2 isofo... 112 8e-25
gi|24234708 paired-like homeodomain transcription factor 2 isofo... 112 8e-25
gi|4826912 paired-like homeodomain 3 [Homo sapiens] 109 4e-24
gi|14249388 retina and anterior neural fold homeobox 2 [Homo sap... 108 9e-24
gi|12707580 paired-like homeobox 2b [Homo sapiens] 107 2e-23
gi|11056038 visual system homeobox 1 isoform a [Homo sapiens] 107 2e-23
gi|57232759 intestine-specific homeobox [Homo sapiens] 105 6e-23
gi|4505619 paired box 7 isoform 1 [Homo sapiens] 104 1e-22
gi|7524359 paired box 7 isoform 2 [Homo sapiens] 104 1e-22
gi|207029223 paired box 7 isoform 3 [Homo sapiens] 104 1e-22
gi|239754062 PREDICTED: orthopedia homeobox [Homo sapiens] 103 2e-22
gi|14149760 orthopedia homeobox [Homo sapiens] 103 2e-22
gi|188219638 paired box 3 isoform PAX3i [Homo sapiens] 103 3e-22
gi|31563348 paired box 3 isoform PAX3g [Homo sapiens] 103 3e-22
gi|31563346 paired box 3 isoform PAX3h [Homo sapiens] 103 3e-22
gi|31563344 paired box 3 isoform PAX3e [Homo sapiens] 103 3e-22
gi|31563342 paired box 3 isoform PAX3d [Homo sapiens] 103 3e-22
gi|31563340 paired box 3 isoform PAX3 [Homo sapiens] 103 3e-22
gi|46249382 paired-like homeobox 2a [Homo sapiens] 103 3e-22
gi|122937321 UNC homeobox [Homo sapiens] 103 4e-22
gi|7706659 paired related homeobox 2 [Homo sapiens] 102 5e-22
>gi|55743092 aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 843 bits (2177), Expect = 0.0
Identities = 411/411 (100%), Positives = 411/411 (100%)
Query: 1 MNAETCVSYCESPAAAMDAYYSPVSQSREGSSPFRAFPGGDKFGTTFLSAAAKAQGFGDA 60
MNAETCVSYCESPAAAMDAYYSPVSQSREGSSPFRAFPGGDKFGTTFLSAAAKAQGFGDA
Sbjct: 1 MNAETCVSYCESPAAAMDAYYSPVSQSREGSSPFRAFPGGDKFGTTFLSAAAKAQGFGDA 60
Query: 61 KSRARYGAGQQDLATPLESGAGARGSFNKFQPQPSTPQPQPPPQPQPQQQQPQPQPPAQP 120
KSRARYGAGQQDLATPLESGAGARGSFNKFQPQPSTPQPQPPPQPQPQQQQPQPQPPAQP
Sbjct: 61 KSRARYGAGQQDLATPLESGAGARGSFNKFQPQPSTPQPQPPPQPQPQQQQPQPQPPAQP 120
Query: 121 HLYLQRGACKTPPDGSLKLQEGSSGHSAALQVPCYAKESSLGEPELPPDSDTVGMDSSYL 180
HLYLQRGACKTPPDGSLKLQEGSSGHSAALQVPCYAKESSLGEPELPPDSDTVGMDSSYL
Sbjct: 121 HLYLQRGACKTPPDGSLKLQEGSSGHSAALQVPCYAKESSLGEPELPPDSDTVGMDSSYL 180
Query: 181 SVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPD 240
SVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPD
Sbjct: 181 SVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPD 240
Query: 241 VYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENY 300
VYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENY
Sbjct: 241 VYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENY 300
Query: 301 AQIQNPSWLGNNGAASPVPACVVPCDPVPACMSPHAHPPGSGASSVTDFLSVSGAGSHVG 360
AQIQNPSWLGNNGAASPVPACVVPCDPVPACMSPHAHPPGSGASSVTDFLSVSGAGSHVG
Sbjct: 301 AQIQNPSWLGNNGAASPVPACVVPCDPVPACMSPHAHPPGSGASSVTDFLSVSGAGSHVG 360
Query: 361 QTHMGSLFGAASLSPGLNGYELNGEPDRKTSSIAALRMKAKEHSAAISWAT 411
QTHMGSLFGAASLSPGLNGYELNGEPDRKTSSIAALRMKAKEHSAAISWAT
Sbjct: 361 QTHMGSLFGAASLSPGLNGYELNGEPDRKTSSIAALRMKAKEHSAAISWAT 411
>gi|154813201 cartilage paired-class homeoprotein 1 [Homo sapiens]
Length = 326
Score = 232 bits (591), Expect = 5e-61
Identities = 123/232 (53%), Positives = 162/232 (69%), Gaps = 9/232 (3%)
Query: 181 SVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPD 240
S++ + VKG Q++ D +K DS + KKRR+RTTFTS QLEELEKVFQKTHYPD
Sbjct: 101 SLRMSPVKGMQEKGELDELG--DKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPD 158
Query: 241 VYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENY 300
VY REQLA+RT+LTEARVQVWFQNRRAKWRKRER+GQ+QQ ++HF+ Y++ +L R ++Y
Sbjct: 159 VYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFAATYDISVLPRTDSY 218
Query: 301 AQIQNPSWLGNNGAASPVPACVVPCDPVPACMSPHAHPPGSGASSVTDFLSVSGAGSHVG 360
QIQN W GN S V +C++P D +CM+P++H P + SS T F + SHV
Sbjct: 219 PQIQNNLWAGNASGGSVVTSCMLPRD-TSSCMTPYSHSPRTD-SSYTGFSNHQNQFSHV- 275
Query: 361 QTHMGSLFGAASLSPGLNGYELNGEP--DRKTSSIAALRMKAKEHSAAISWA 410
+ + F + L+ NG+ +P +R++SSIA LRMKAKEH+A ISWA
Sbjct: 276 --PLNNFFTDSLLTGATNGHAFETKPEFERRSSSIAVLRMKAKEHTANISWA 325
>gi|113204604 aristaless-like homeobox 3 [Homo sapiens]
Length = 343
Score = 206 bits (523), Expect = 4e-53
Identities = 129/323 (39%), Positives = 182/323 (56%), Gaps = 41/323 (12%)
Query: 93 QPSTPQPQPPPQPQPQQQQPQPQPPAQPHLYLQRGACKTPPDGSLKLQEGSSGHSAALQV 152
+P P+P PP Q P P H Y +G + +E +S ++ Q+
Sbjct: 58 EPYLPEPAKPPAKYLQDLGPGPALNGG-HFY----------EGPAEAEEKTSKAASFPQL 106
Query: 153 PCYAKESSLGEPELPPDSDTVGMDSSYLSVKEAGVKGPQDRASSDLPSPLEKADSESNKG 212
P + P S + S +L + S LP +E A NK
Sbjct: 107 PLDCRGGPRDGPSNLQGSPGPCLASLHLPL------------SPGLPDSMELA---KNKS 151
Query: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 272
KKRRNRTTF+++QLEELEKVFQKTHYPDVYAREQLA+RTDLTEARVQVWFQNRRAKWRKR
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKR 211
Query: 273 ERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPA-C 331
ER+G++Q+ R F+ AY++ +L R +++ Q+QN W + G+ SP C+V + +P+ C
Sbjct: 212 ERYGKIQEGRNPFTAAYDISVLPRTDSHPQLQNSLW-ASPGSGSPGGPCLVSPEGIPSPC 270
Query: 332 MSPHAHPPGSGASSVTDFLSV-SGAGSHVGQTHMGSLFGAASLSPGLNG--YELNGEPDR 388
MSP++HP G SV F+ V + + +H G ++ P L G +E + + D
Sbjct: 271 MSPYSHPHG----SVAGFMGVPAPSAAHPG------IYSIHGFPPTLGGHSFEPSSDGDY 320
Query: 389 KTSSIAALRMKAKEHSAAISWAT 411
K+ S+ +LR+K KE ++W T
Sbjct: 321 KSPSLVSLRVKPKEPPGLLNWTT 343
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 139 bits (350), Expect = 5e-33
Identities = 110/271 (40%), Positives = 140/271 (51%), Gaps = 40/271 (14%)
Query: 173 VGMDSSYLSVKEAGVKGPQDRASSD-LPSPLEKADSESNKG----KKRRNRTTFTSYQLE 227
V + LS KE + P+D D S A S+S +G K+RR RTTFTSYQLE
Sbjct: 282 VATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 341
Query: 228 ELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTH--- 284
ELE+ FQKTHYPDV+ RE+LAMR DLTEARVQVWFQNRRAKWRKRE+ G +TH
Sbjct: 342 ELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAG----AQTHPPG 397
Query: 285 ------FSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVP---ACMSPH 335
S + L A + +P+ AA+ A P P P A + P
Sbjct: 398 LPFPGPLSATHPLSPYLDASPFPP-HHPALDSAWTAAAAAAAAAFPSLPPPPGSASLPPS 456
Query: 336 AHPPG----SGASSVTDFLSVSGAGSHVGQT--HMGSLFGAASL----SPGLNGYELNG- 384
P G GA+ +S A + T + S AA+L +P + G +G
Sbjct: 457 GAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVASGA 516
Query: 385 -------EPDRKTSSIAALRMKAKEHSAAIS 408
DR+ SSIAALR+KAKEH+A ++
Sbjct: 517 LADPATAAADRRASSIAALRLKAKEHAAQLT 547
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 125 bits (315), Expect = 5e-29
Identities = 109/346 (31%), Positives = 140/346 (40%), Gaps = 94/346 (27%)
Query: 82 GARGSFNKFQPQPSTPQPQPPPQPQPQQQQPQPQPPAQPHLYLQRGACKTPPDGSLKLQE 141
GAR + K + S P P P P P P+ + P+P P +P
Sbjct: 68 GARPACPKAPEEGSEPSPPPAPAPAPEYEAPRPYCPKEP--------------------- 106
Query: 142 GSSGHSAALQVPCYAKESSLGEPELPPDSDTVGMDSSYLSVKEAGVKGPQDRASSDLPSP 201
G + S L V E+ L E E P
Sbjct: 107 GEARPSPGLPVGPATGEAKLSEEEQP---------------------------------- 132
Query: 202 LEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVW 261
K K RRNRTTFT+YQL ELE+ F+K+HYPDVY+RE+LA + +L E RVQVW
Sbjct: 133 ---------KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVW 183
Query: 262 FQNRRAKWRKRERF---GQMQQVRTHFSTAYELPLLTRAENYA-----------QIQNPS 307
FQNRRAKWR++E+ Q S + P T + A + S
Sbjct: 184 FQNRRAKWRRQEKLEVSSMKLQDSPLLSFSRSPPSATLSPLGAGPGSGGGPAGGALPLES 243
Query: 308 WLG----NNGAAS--PVPACVVPCDPVPACMSPHAHPPGSGASSVTDFLSVSGAGSHVGQ 361
WLG GA + +P P +PA +P PP FL+ G G
Sbjct: 244 WLGPPLPGGGATALQSLPGFGPPAQSLPASYTPPPPPP--------PFLNSPPLGP--GL 293
Query: 362 THMGSLFGAASLSPGLNGYELNGEPDRKTSSIAALRMKAKEHSAAI 407
+ + PG E D + SSIAALR+KAKEH AI
Sbjct: 294 QPLAPPPPSYPCGPGFGDKFPLDEADPRNSSIAALRLKAKEHIQAI 339
>gi|122937484 dorsal root ganglia homeobox [Homo sapiens]
Length = 268
Score = 122 bits (305), Expect = 8e-28
Identities = 84/199 (42%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 272
K+RRNRTTFT QLE LE VF +THYPDV+ RE+LAM+ +LTEARVQVWFQNRRAKWRK
Sbjct: 37 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 96
Query: 273 ERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNG--AASPVPACVVPCDP-VP 329
ER Q+ A P R N + + A + V P P P
Sbjct: 97 ERGASDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEALEAQQSLGRTVGPAGPFFP 156
Query: 330 ACMSPHAHPPGSGASSVTDFLSVSGAGSHVGQTHMGSLFGAASLSP-GLNGYELNGEPDR 388
+C+ PG+ ++ T + A SHV G L P GL+ G
Sbjct: 157 SCL------PGTLLNTAT----YAQALSHVASLKGGPLCSCCVPDPMGLSFLPTYGCQSN 206
Query: 389 KTSSIAALRMKAKEHSAAI 407
+T+S+A LRMKA+EHS A+
Sbjct: 207 RTASVATLRMKAREHSEAV 225
>gi|152963644 paired-like homeodomain transcription factor 1 [Homo
sapiens]
Length = 314
Score = 115 bits (289), Expect = 6e-26
Identities = 98/319 (30%), Positives = 145/319 (45%), Gaps = 58/319 (18%)
Query: 107 PQQQQPQPQPPAQ--PHLYLQRGACKTPPDGSLKLQEGSSGHSAALQVPCYAKESSLGEP 164
P+ +P P PP P +L R A P E S+ S+ ++P ++ GEP
Sbjct: 14 PEGLRPPPPPPHDMGPAFHLARPADPREP------LENSASESSDTELP---EKERGGEP 64
Query: 165 ELPPDSDTVGMDSSYLSVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSY 224
+ P DS G G G AD + K K+RR RT FTS
Sbjct: 65 KGPEDSGAGG----------TGCGG---------------ADDPAKKKKQRRQRTHFTSQ 99
Query: 225 QLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTH 284
QL+ELE FQ+ YPD+ RE++A+ T+LTE RV+VWF+NRRAKWRKRER Q+ +
Sbjct: 100 QLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKGG 159
Query: 285 FSTAYELPLLTRAENYAQIQNPSWLGNNGAA---SPVPACVVPCDPVPACMSPHAHPPGS 341
+ + + Y + + NN AA +P P + + S
Sbjct: 160 YVPQFS----GLVQPYEDVYAAGYSYNNWAAKSLAPAPLSTKSFTFFNSMSPLSSQSMFS 215
Query: 342 GASSVTDFLSVSGAG-------SHVGQTHMGSLFGA---ASLSPGLNGYELNGEP----- 386
SS++ S G + G ++ +L G+ +++SPG Y P
Sbjct: 216 APSSISSMTMPSSMGPGAVPGMPNSGLNNINNLTGSSLNSAMSPGACPYGTPASPYSVYR 275
Query: 387 DRKTSSIAALRMKAKEHSA 405
D SS+A+LR+K+K+HS+
Sbjct: 276 DTCNSSLASLRLKSKQHSS 294
>gi|34365783 visual system homeobox 2 [Homo sapiens]
Length = 361
Score = 115 bits (288), Expect = 7e-26
Identities = 58/102 (56%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 173 VGMDSSYLSVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKV 232
+G S L + +D +SSD + A +++ K KKRR+RT FTSYQLEELEK
Sbjct: 108 LGRASGPLDTSQTASSDSEDVSSSDRKMS-KSALNQTKKRKKRRHRTIFTSYQLEELEKA 166
Query: 233 FQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRER 274
F + HYPDVYARE LAM+T+L E R+QVWFQNRRAKWRKRE+
Sbjct: 167 FNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREK 208
>gi|21361183 paired-like homeodomain transcription factor 2 isoform
c [Homo sapiens]
Length = 324
Score = 112 bits (279), Expect = 8e-25
Identities = 81/223 (36%), Positives = 114/223 (51%), Gaps = 27/223 (12%)
Query: 205 ADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQN 264
A+ S K ++RR RT FTS QL+ELE FQ+ YPD+ RE++A+ T+LTEARV+VWF+N
Sbjct: 83 AEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKN 142
Query: 265 RRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVP 324
RRAKWRKRER Q + + F + + + Y P + NN AA + + +
Sbjct: 143 RRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMY-----PGYSYNNWAAKGLTSASLS 197
Query: 325 CDPVPACMSPHAH---------PPGSGASSVTDFLSVSGAGSHVGQTHMGSLFGAASL-S 374
P S + + PP S +S V A + V + + SL +L S
Sbjct: 198 TKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSS 257
Query: 375 PGLNG--------YELNGEP----DRKTSSIAALRMKAKEHSA 405
P LN Y P D SS+A+LR+KAK+HS+
Sbjct: 258 PSLNSAVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSS 300
>gi|24234711 paired-like homeodomain transcription factor 2 isoform
a [Homo sapiens]
Length = 271
Score = 112 bits (279), Expect = 8e-25
Identities = 81/223 (36%), Positives = 114/223 (51%), Gaps = 27/223 (12%)
Query: 205 ADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQN 264
A+ S K ++RR RT FTS QL+ELE FQ+ YPD+ RE++A+ T+LTEARV+VWF+N
Sbjct: 30 AEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKN 89
Query: 265 RRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVP 324
RRAKWRKRER Q + + F + + + Y P + NN AA + + +
Sbjct: 90 RRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMY-----PGYSYNNWAAKGLTSASLS 144
Query: 325 CDPVPACMSPHAH---------PPGSGASSVTDFLSVSGAGSHVGQTHMGSLFGAASL-S 374
P S + + PP S +S V A + V + + SL +L S
Sbjct: 145 TKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSS 204
Query: 375 PGLNG--------YELNGEP----DRKTSSIAALRMKAKEHSA 405
P LN Y P D SS+A+LR+KAK+HS+
Sbjct: 205 PSLNSAVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSS 247
>gi|24234708 paired-like homeodomain transcription factor 2 isoform
b [Homo sapiens]
Length = 317
Score = 112 bits (279), Expect = 8e-25
Identities = 81/223 (36%), Positives = 114/223 (51%), Gaps = 27/223 (12%)
Query: 205 ADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQN 264
A+ S K ++RR RT FTS QL+ELE FQ+ YPD+ RE++A+ T+LTEARV+VWF+N
Sbjct: 76 AEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKN 135
Query: 265 RRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVP 324
RRAKWRKRER Q + + F + + + Y P + NN AA + + +
Sbjct: 136 RRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMY-----PGYSYNNWAAKGLTSASLS 190
Query: 325 CDPVPACMSPHAH---------PPGSGASSVTDFLSVSGAGSHVGQTHMGSLFGAASL-S 374
P S + + PP S +S V A + V + + SL +L S
Sbjct: 191 TKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSS 250
Query: 375 PGLNG--------YELNGEP----DRKTSSIAALRMKAKEHSA 405
P LN Y P D SS+A+LR+KAK+HS+
Sbjct: 251 PSLNSAVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSS 293
>gi|4826912 paired-like homeodomain 3 [Homo sapiens]
Length = 302
Score = 109 bits (273), Expect = 4e-24
Identities = 89/270 (32%), Positives = 123/270 (45%), Gaps = 47/270 (17%)
Query: 177 SSYLSVKEAGVKGPQ--------------DRASSDLPSPLEKADSESNKGKKRRNRTTFT 222
S LS+ +AG PQ ++AS+ LP + S K K+RR RT FT
Sbjct: 13 SPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGG--SPEDGSLKKKQRRQRTHFT 70
Query: 223 SYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVR 282
S QL+ELE FQ+ YPD+ RE++A+ T+LTEARV+VWF+NRRAKWRKRER Q + +
Sbjct: 71 SQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCK 130
Query: 283 THFSTAYELPLLTRAENYAQIQNPSW----LGNNGAASPVPACVVPCDPVPACMSPHAHP 338
F+ + E Y +W L AA P + P P P
Sbjct: 131 GSFAAPLGGLVPPYEEVYPGYSYGNWPPKALAPPLAAKTFPFAFNSVNVGPLASQPVFSP 190
Query: 339 PGSGASSVTDFLSVSGAGSHVGQTHMGSLFGAASLSPGLNGYELNGEP------------ 386
P S A+S+ S A + G+L G PGL ++
Sbjct: 191 PSSIAASMVP----SAAAAPGTVPGPGALQGLGGGPPGLAPAAVSSGAVSCPYASAAAAA 246
Query: 387 -----------DRKTSSIAALRMKAKEHSA 405
D SS+A+LR+KAK+H++
Sbjct: 247 AAAASSPYVYRDPCNSSLASLRLKAKQHAS 276
>gi|14249388 retina and anterior neural fold homeobox 2 [Homo
sapiens]
Length = 184
Score = 108 bits (270), Expect = 9e-24
Identities = 61/135 (45%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 208 ESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRA 267
E+ K K RRNRTTFT+YQL +LE+ F+ +HYPDVY+RE+LA + L E RVQVWFQNRRA
Sbjct: 21 EAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRA 80
Query: 268 KWRKRERF--GQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASP-VPACVVP 324
KWR++ER G A LP ++ WLG A P +P + P
Sbjct: 81 KWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLE--PWLGPGPPAVPGLPRLLGP 138
Query: 325 CDPVPACMSPHAHPP 339
+ A PHA P
Sbjct: 139 GPGLQASFGPHAFAP 153
Score = 28.9 bits (63), Expect = 8.9
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 77 LESGAGARGSFNKFQPQPSTPQPQPPPQPQPQQQQPQPQPPAQPHL 122
LESG+GA + + P+ P +PP P + P PPA P L
Sbjct: 88 LESGSGAVAA-PRLPEAPALPFARPPAMSLPLEPWLGPGPPAVPGL 132
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 107 bits (267), Expect = 2e-23
Identities = 65/164 (39%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 209 SNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 268
+ K K+RR RTTFTS QL+ELE+VF +THYPD+Y RE+LA++ DLTEARVQVWFQNRRAK
Sbjct: 93 NEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 152
Query: 269 WRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPV 328
+RK+ER ++ + +R + + ++ + G P P +P
Sbjct: 153 FRKQERAAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTD-PDSTGGPGPNP------NPT 205
Query: 329 PACMSPHAHPPGSGASSVTDFLSVSGAGSHVGQTHMGSLFGAAS 372
P+C A+ G G S +G G G+ G AA+
Sbjct: 206 PSC---GANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAA 246
>gi|11056038 visual system homeobox 1 isoform a [Homo sapiens]
Length = 365
Score = 107 bits (267), Expect = 2e-23
Identities = 49/71 (69%), Positives = 58/71 (81%)
Query: 204 KADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQ 263
KA K KKRR+RT FT++QLEELEK F + HYPDVYARE LA++T+L E R+QVWFQ
Sbjct: 154 KASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQ 213
Query: 264 NRRAKWRKRER 274
NRRAKWRKRE+
Sbjct: 214 NRRAKWRKREK 224
>gi|57232759 intestine-specific homeobox [Homo sapiens]
Length = 245
Score = 105 bits (263), Expect = 6e-23
Identities = 76/212 (35%), Positives = 99/212 (46%), Gaps = 36/212 (16%)
Query: 127 GACKTPPDGSLKLQEGSSGHSAALQVPCYAKESSLGEPELPPDSDTVGMDSSYLSVKEAG 186
G C+ P SL S A L+ P A+ S + PE P G
Sbjct: 19 GCCEAPKKLSL-----SFSIEAILKRP--ARRSDMDRPEGP------------------G 53
Query: 187 VKGPQDRASSD--LPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAR 244
+GP + A+S L P + E K K RR RTTFT+ QL ELEK+F THYPDV+ R
Sbjct: 54 EEGPGEAAASGSGLEKPPKDQPQEGRKSK-RRVRTTFTTEQLHELEKIFHFTHYPDVHIR 112
Query: 245 EQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQ 304
QLA R +L EARVQ+WFQN+RAKWRK+E+ G + + + LP +
Sbjct: 113 SQLAARINLPEARVQIWFQNQRAKWRKQEKIGNLGAPQQLSEASVALP------TNLDVA 166
Query: 305 NPSWLGN--NGAASPVPACVVPCDPVPACMSP 334
P+W A P C D + + P
Sbjct: 167 GPTWTSTALRRLAPPTSCCPSAQDQLASAWFP 198
>gi|4505619 paired box 7 isoform 1 [Homo sapiens]
Length = 520
Score = 104 bits (260), Expect = 1e-22
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 5/81 (6%)
Query: 203 EKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEAR 257
E +D ES K K+RR+RTTFT+ QLEELEK F++THYPD+Y RE+LA RT LTEAR
Sbjct: 201 EGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEAR 260
Query: 258 VQVWFQNRRAKWRKRERFGQM 278
VQVWF NRRA+WRK+ Q+
Sbjct: 261 VQVWFSNRRARWRKQAGANQL 281
>gi|7524359 paired box 7 isoform 2 [Homo sapiens]
Length = 518
Score = 104 bits (260), Expect = 1e-22
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 5/81 (6%)
Query: 203 EKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEAR 257
E +D ES K K+RR+RTTFT+ QLEELEK F++THYPD+Y RE+LA RT LTEAR
Sbjct: 199 EGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEAR 258
Query: 258 VQVWFQNRRAKWRKRERFGQM 278
VQVWF NRRA+WRK+ Q+
Sbjct: 259 VQVWFSNRRARWRKQAGANQL 279
>gi|207029223 paired box 7 isoform 3 [Homo sapiens]
Length = 505
Score = 104 bits (260), Expect = 1e-22
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 5/81 (6%)
Query: 203 EKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEAR 257
E +D ES K K+RR+RTTFT+ QLEELEK F++THYPD+Y RE+LA RT LTEAR
Sbjct: 201 EGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEAR 260
Query: 258 VQVWFQNRRAKWRKRERFGQM 278
VQVWF NRRA+WRK+ Q+
Sbjct: 261 VQVWFSNRRARWRKQAGANQL 281
>gi|239754062 PREDICTED: orthopedia homeobox [Homo sapiens]
Length = 325
Score = 103 bits (258), Expect = 2e-22
Identities = 86/268 (32%), Positives = 123/268 (45%), Gaps = 32/268 (11%)
Query: 169 DSDTVGMDSSYLSVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEE 228
D TVG + L+V K P + +A + + K++R+RT FT QL E
Sbjct: 62 DITTVGSTPASLAVS---AKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNE 118
Query: 229 LEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTA 288
LE+ F KTHYPD++ RE+LA+R LTE+RVQVWFQNRRAKW+KR++ + +
Sbjct: 119 LERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPT 178
Query: 289 YELPLLTRAENYAQIQNPSWL------GNNGAASPVPACVVPCDPVPACM---------- 332
LP A A L AA+ +P V P+P +
Sbjct: 179 PGLPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPG--VSQLPLPPALGRQQAMAQSL 236
Query: 333 ---SPHAHPPGSGASSVTDFLSVSGAG--SHVGQTHMGSLFGAASLSPG--LNGYELNGE 385
S A PP + +GAG SH+ Q + A+ P +L
Sbjct: 237 SQCSLAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSS 296
Query: 386 PDR----KTSSIAALRMKAKEHSAAISW 409
PD + +SIA+LR KA EH+ ++S+
Sbjct: 297 PDSSDVWRGTSIASLRRKALEHTVSMSF 324
>gi|14149760 orthopedia homeobox [Homo sapiens]
Length = 325
Score = 103 bits (258), Expect = 2e-22
Identities = 86/268 (32%), Positives = 123/268 (45%), Gaps = 32/268 (11%)
Query: 169 DSDTVGMDSSYLSVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEE 228
D TVG + L+V K P + +A + + K++R+RT FT QL E
Sbjct: 62 DITTVGSTPASLAVS---AKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNE 118
Query: 229 LEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTA 288
LE+ F KTHYPD++ RE+LA+R LTE+RVQVWFQNRRAKW+KR++ + +
Sbjct: 119 LERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPT 178
Query: 289 YELPLLTRAENYAQIQNPSWL------GNNGAASPVPACVVPCDPVPACM---------- 332
LP A A L AA+ +P V P+P +
Sbjct: 179 PGLPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPG--VSQLPLPPALGRQQAMAQSL 236
Query: 333 ---SPHAHPPGSGASSVTDFLSVSGAG--SHVGQTHMGSLFGAASLSPG--LNGYELNGE 385
S A PP + +GAG SH+ Q + A+ P +L
Sbjct: 237 SQCSLAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSS 296
Query: 386 PDR----KTSSIAALRMKAKEHSAAISW 409
PD + +SIA+LR KA EH+ ++S+
Sbjct: 297 PDSSDVWRGTSIASLRRKALEHTVSMSF 324
>gi|188219638 paired box 3 isoform PAX3i [Homo sapiens]
Length = 483
Score = 103 bits (257), Expect = 3e-22
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 192 DRASSDLPSPLEKADSESN---KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 248
+RAS+ DSE + K K+RR+RTTFT+ QLEELE+ F++THYPD+Y RE+LA
Sbjct: 193 ERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 252
Query: 249 MRTDLTEARVQVWFQNRRAKWRKRERFGQM 278
R LTEARVQVWF NRRA+WRK+ Q+
Sbjct: 253 QRAKLTEARVQVWFSNRRARWRKQAGANQL 282
>gi|31563348 paired box 3 isoform PAX3g [Homo sapiens]
Length = 403
Score = 103 bits (257), Expect = 3e-22
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 192 DRASSDLPSPLEKADSESN---KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 248
+RAS+ DSE + K K+RR+RTTFT+ QLEELE+ F++THYPD+Y RE+LA
Sbjct: 194 ERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 253
Query: 249 MRTDLTEARVQVWFQNRRAKWRKRERFGQM 278
R LTEARVQVWF NRRA+WRK+ Q+
Sbjct: 254 QRAKLTEARVQVWFSNRRARWRKQAGANQL 283
>gi|31563346 paired box 3 isoform PAX3h [Homo sapiens]
Length = 407
Score = 103 bits (257), Expect = 3e-22
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 192 DRASSDLPSPLEKADSESN---KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 248
+RAS+ DSE + K K+RR+RTTFT+ QLEELE+ F++THYPD+Y RE+LA
Sbjct: 194 ERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 253
Query: 249 MRTDLTEARVQVWFQNRRAKWRKRERFGQM 278
R LTEARVQVWF NRRA+WRK+ Q+
Sbjct: 254 QRAKLTEARVQVWFSNRRARWRKQAGANQL 283
>gi|31563344 paired box 3 isoform PAX3e [Homo sapiens]
Length = 505
Score = 103 bits (257), Expect = 3e-22
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 192 DRASSDLPSPLEKADSESN---KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 248
+RAS+ DSE + K K+RR+RTTFT+ QLEELE+ F++THYPD+Y RE+LA
Sbjct: 194 ERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 253
Query: 249 MRTDLTEARVQVWFQNRRAKWRKRERFGQM 278
R LTEARVQVWF NRRA+WRK+ Q+
Sbjct: 254 QRAKLTEARVQVWFSNRRARWRKQAGANQL 283
>gi|31563342 paired box 3 isoform PAX3d [Homo sapiens]
Length = 484
Score = 103 bits (257), Expect = 3e-22
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 192 DRASSDLPSPLEKADSESN---KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 248
+RAS+ DSE + K K+RR+RTTFT+ QLEELE+ F++THYPD+Y RE+LA
Sbjct: 194 ERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 253
Query: 249 MRTDLTEARVQVWFQNRRAKWRKRERFGQM 278
R LTEARVQVWF NRRA+WRK+ Q+
Sbjct: 254 QRAKLTEARVQVWFSNRRARWRKQAGANQL 283
>gi|31563340 paired box 3 isoform PAX3 [Homo sapiens]
Length = 479
Score = 103 bits (257), Expect = 3e-22
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 192 DRASSDLPSPLEKADSESN---KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLA 248
+RAS+ DSE + K K+RR+RTTFT+ QLEELE+ F++THYPD+Y RE+LA
Sbjct: 194 ERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 253
Query: 249 MRTDLTEARVQVWFQNRRAKWRKRERFGQM 278
R LTEARVQVWF NRRA+WRK+ Q+
Sbjct: 254 QRAKLTEARVQVWFSNRRARWRKQAGANQL 283
>gi|46249382 paired-like homeobox 2a [Homo sapiens]
Length = 284
Score = 103 bits (257), Expect = 3e-22
Identities = 48/64 (75%), Positives = 58/64 (90%)
Query: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 270
K K+RR RTTFTS QL+ELE+VF +THYPD+Y RE+LA++ DLTEARVQVWFQNRRAK+R
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 271 KRER 274
K+ER
Sbjct: 147 KQER 150
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 103 bits (256), Expect = 4e-22
Identities = 56/120 (46%), Positives = 69/120 (57%), Gaps = 17/120 (14%)
Query: 154 CYAKESSLGEPELPPDSDTVGMDSSYLSVKEAGVKGPQDRASSDLPSPLEKADSESNKGK 213
C A S + L P + VG D + ++G D ES K
Sbjct: 62 CAAAASVVNPTPLLPAACGVGGDGQPFKLSDSG-----------------DPDKESPGCK 104
Query: 214 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRE 273
+RR RT FT +QLEELEK F ++HYPDV+ RE LA+R DL E+RVQVWFQNRRAKWRK+E
Sbjct: 105 RRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWRKKE 164
Score = 30.0 bits (66), Expect = 4.0
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 71 QDLATPLESGAGARGSFNKFQPQPSTPQPQPPPQPQPQQQQPQPQPPAQPHLYLQRGACK 130
+DLA+ + G + P+ P P P P+P P+ P +P A
Sbjct: 461 RDLASAAATEGGGGDCADAGTAGPAPPPPAPSPRPGPRPPSPAEEPATCGVPEPGAAAGP 520
Query: 131 TPPDG 135
+PP+G
Sbjct: 521 SPPEG 525
>gi|7706659 paired related homeobox 2 [Homo sapiens]
Length = 253
Score = 102 bits (255), Expect = 5e-22
Identities = 78/216 (36%), Positives = 103/216 (47%), Gaps = 57/216 (26%)
Query: 190 PQDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAM 249
PQD + PSP + + K K+RRNRTTF S QL+ LE+VF++THYPD + RE+LA
Sbjct: 84 PQD---GECPSP-GRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELAR 139
Query: 250 RTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWL 309
R +L+EARVQVWFQNRRAK+R+ ER + LL A I+ P
Sbjct: 140 RVNLSEARVQVWFQNRRAKFRRNER---------AMLASRSASLLKSYSQEAAIEQP--- 187
Query: 310 GNNGAASPVPACVVPCDPVPACMSPHAH-PPGSGASSVTDFLSVSGAGSHVGQTHMGSLF 368
+P P + P SP++ PP S SS
Sbjct: 188 -----VAPRPTALSPDYLSWTASSPYSTVPPYSPGSS----------------------- 219
Query: 369 GAASLSPGLNGYELNGEPDRKTSSIAALRMKAKEHS 404
+PG+N +SIA+LR+KAKE S
Sbjct: 220 --GPATPGVN----------MANSIASLRLKAKEFS 243
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,900,139
Number of Sequences: 37866
Number of extensions: 1258163
Number of successful extensions: 21439
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 627
Number of HSP's that attempted gapping in prelim test: 10127
Number of HSP's gapped (non-prelim): 7051
length of query: 411
length of database: 18,247,518
effective HSP length: 105
effective length of query: 306
effective length of database: 14,271,588
effective search space: 4367105928
effective search space used: 4367105928
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.