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Search of human proteins with 55741870
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55741870 zinc finger protein 483 isoform b [Homo sapiens]
(256 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55741870 zinc finger protein 483 isoform b [Homo sapiens] 511 e-145
gi|190014620 zinc finger protein 483 isoform a [Homo sapiens] 482 e-136
gi|93004074 zinc finger protein 215 [Homo sapiens] 194 6e-50
gi|194328783 zinc finger protein 287 [Homo sapiens] 186 1e-47
gi|19743801 zinc finger protein 274 isoform c [Homo sapiens] 149 3e-36
gi|7706507 zinc finger protein 274 isoform a [Homo sapiens] 149 3e-36
gi|19743798 zinc finger protein 274 isoform b [Homo sapiens] 149 3e-36
gi|197383784 zinc finger protein 213 [Homo sapiens] 148 4e-36
gi|32698678 zinc finger protein 213 [Homo sapiens] 148 4e-36
gi|109715825 zinc finger protein 690 [Homo sapiens] 145 3e-35
gi|46195755 SCAN domain containing 3 [Homo sapiens] 139 2e-33
gi|41281749 zinc finger protein 323 [Homo sapiens] 137 1e-32
gi|206725432 zinc finger protein 323 [Homo sapiens] 137 1e-32
gi|206725430 zinc finger protein 323 [Homo sapiens] 137 1e-32
gi|206725428 zinc finger protein 323 [Homo sapiens] 137 1e-32
gi|254281232 zinc finger and SCAN domain containing 12 [Homo sap... 135 5e-32
gi|171906553 zinc finger with KRAB and SCAN domains 3 [Homo sapi... 130 1e-30
gi|190883486 zinc finger protein 390 [Homo sapiens] 129 2e-30
gi|13376834 zinc finger and SCAN domain containing 16 [Homo sapi... 126 2e-29
gi|57863253 zinc finger protein 500 [Homo sapiens] 126 2e-29
gi|17738285 zinc finger with KRAB and SCAN domains 4 [Homo sapiens] 125 3e-29
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 125 3e-29
gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 125 3e-29
gi|27544931 zinc finger protein 38 [Homo sapiens] 125 5e-29
gi|163644333 zinc finger protein 397 opposite strand [Homo sapiens] 124 6e-29
gi|4508001 zinc finger protein 165 [Homo sapiens] 123 1e-28
gi|206597472 zinc finger protein 397 isoform 1 [Homo sapiens] 123 1e-28
gi|14150143 zinc finger protein 397 isoform 2 [Homo sapiens] 123 1e-28
gi|190610012 zinc finger protein 24 [Homo sapiens] 122 4e-28
gi|55769564 zinc finger protein 36 [Homo sapiens] 121 7e-28
>gi|55741870 zinc finger protein 483 isoform b [Homo sapiens]
Length = 256
Score = 511 bits (1315), Expect = e-145
Identities = 256/256 (100%), Positives = 256/256 (100%)
Query: 1 MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCY 60
MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCY
Sbjct: 1 MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCY 60
Query: 61 SEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESS 120
SEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESS
Sbjct: 61 SEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESS 120
Query: 121 EEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVNFS 180
EEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVNFS
Sbjct: 121 EEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVNFS 180
Query: 181 RGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKLELISQLKWVELPWLLEEVSKSSRL 240
RGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKLELISQLKWVELPWLLEEVSKSSRL
Sbjct: 181 RGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKLELISQLKWVELPWLLEEVSKSSRL 240
Query: 241 DIHGAVKKMQMFSEAE 256
DIHGAVKKMQMFSEAE
Sbjct: 241 DIHGAVKKMQMFSEAE 256
>gi|190014620 zinc finger protein 483 isoform a [Homo sapiens]
Length = 744
Score = 482 bits (1240), Expect = e-136
Identities = 241/241 (100%), Positives = 241/241 (100%)
Query: 1 MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCY 60
MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCY
Sbjct: 1 MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCY 60
Query: 61 SEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESS 120
SEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESS
Sbjct: 61 SEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESS 120
Query: 121 EEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVNFS 180
EEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVNFS
Sbjct: 121 EEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVNFS 180
Query: 181 RGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKLELISQLKWVELPWLLEEVSKSSRL 240
RGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKLELISQLKWVELPWLLEEVSKSSRL
Sbjct: 181 RGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKLELISQLKWVELPWLLEEVSKSSRL 240
Query: 241 D 241
D
Sbjct: 241 D 241
>gi|93004074 zinc finger protein 215 [Homo sapiens]
Length = 517
Score = 194 bits (493), Expect = 6e-50
Identities = 112/244 (45%), Positives = 156/244 (63%), Gaps = 14/244 (5%)
Query: 6 PLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCYSEVAG 65
PL+K+ AIS +P+ L+ EQ EV R S +QE D+E+ RQ+FR F Y +V+G
Sbjct: 3 PLSKLMAIS-KPRNLSLREQREVLRADMSWQQETNPVVETHDSEASRQKFRHFQYLKVSG 61
Query: 66 PRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVT 125
P +ALSQLWELC QWLRP+IHTK+QI+ELLV EQFL ILP E+R WV QHP +S+++VT
Sbjct: 62 PHEALSQLWELCLQWLRPEIHTKKQIIELLVLEQFLAILPEEVRTWVNLQHPNNSKDMVT 121
Query: 126 LIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVNFSRGEWK 185
LIED+ +MLE++D +DS + + S ++KM + E +T KDV V FS+ EW
Sbjct: 122 LIEDVIEMLEDEDMPCKDSAL--QMGSIKEKMKAGSRTGKPQEPVTFKDVVVEFSKEEWG 179
Query: 186 KLEPFQKELYKEVLLENLRNL------EFLDFPVSKLELISQLKWVELPWLLE-EVSKSS 238
+L+ K LY+ V+LEN RNL L P L+L S+ K W++E E+ + +
Sbjct: 180 QLDSAVKNLYRNVMLENFRNLNSLRKAHLLSKPFESLKLESKKK----RWIMEKEIPRKT 235
Query: 239 RLDI 242
D+
Sbjct: 236 IFDM 239
>gi|194328783 zinc finger protein 287 [Homo sapiens]
Length = 761
Score = 186 bits (473), Expect = 1e-47
Identities = 104/201 (51%), Positives = 138/201 (68%), Gaps = 10/201 (4%)
Query: 36 EQEAILRGNAADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELL 95
E+E + D E+ RQ FR F Y ++AGPRKALSQL ELC +WLRP+IH+KEQILELL
Sbjct: 33 EKEILTSRFLRDTETCRQNFRNFPYPDLAGPRKALSQLRELCLKWLRPEIHSKEQILELL 92
Query: 96 VFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKED 155
V EQFLTILPGE+R WVKSQ+PESSEE VTL+EDLTQ+LEE+ P Q+ST+SQ+ ++
Sbjct: 93 VLEQFLTILPGEVRTWVKSQYPESSEEAVTLVEDLTQILEEEAP--QNSTLSQDTPEEDP 150
Query: 156 K-----MVTVCPNTESCESITLKDVAVNFSRGEWKKLEPFQKELYKEVLLENLRNLEFLD 210
+ + + ES+T KDVAV+ ++ +W+ + P QKELYK V L+N N+ L
Sbjct: 151 RGKHAFQTGWLNDLVTKESMTFKDVAVDITQEDWELMRPVQKELYKTVTLQNYWNMVSLG 210
Query: 211 FPVSKLELISQLKWVELPWLL 231
V + +I L E PW++
Sbjct: 211 LTVYRPTVIPIL---EEPWMV 228
>gi|19743801 zinc finger protein 274 isoform c [Homo sapiens]
Length = 653
Score = 149 bits (375), Expect = 3e-36
Identities = 83/170 (48%), Positives = 111/170 (65%), Gaps = 12/170 (7%)
Query: 47 DAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPG 106
D E+ RQRFR F Y ++ GPR+AL QL ELC+QWL+P +KEQILELLV EQFL LP
Sbjct: 156 DPEAARQRFRQFRYKDMTGPREALDQLRELCHQWLQPKARSKEQILELLVLEQFLGALPV 215
Query: 107 EIRIWVKSQHPESSEEVVTLIEDLTQMLEEKD-PVSQDS--------TVSQEENSKEDKM 157
++R WV+SQHPE+ +EVV L+E +T M EE+ P Q + +Q+E +ED
Sbjct: 216 KLRTWVESQHPENCQEVVALVEGVTWMSEEEVLPAGQPAEGTTCCLEVTAQQEEKQED-- 273
Query: 158 VTVCPNTESCES-ITLKDVAVNFSRGEWKKLEPFQKELYKEVLLENLRNL 206
+CP T E +T +DVAV+FSR EW L P Q+ Y++V+LE +L
Sbjct: 274 AAICPVTVLPEEPVTFQDVAVDFSREEWGLLGPTQRTEYRDVMLETFGHL 323
Score = 63.5 bits (153), Expect = 2e-10
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 157 MVTVCPNTESCESITLKDVAVNFSRGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKL 216
M + P SCE +T +DV + F+ EW L+ QK LY+EV+LEN RNL ++ +SK
Sbjct: 1 MASRLPTAWSCEPVTFEDVTLGFTPEEWGLLDLKQKSLYREVMLENYRNLVSVEHQLSKP 60
Query: 217 ELISQLKWVELPWLLE 232
+++SQL+ E W +E
Sbjct: 61 DVVSQLEEAEDFWPVE 76
>gi|7706507 zinc finger protein 274 isoform a [Homo sapiens]
Length = 621
Score = 149 bits (375), Expect = 3e-36
Identities = 83/170 (48%), Positives = 111/170 (65%), Gaps = 12/170 (7%)
Query: 47 DAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPG 106
D E+ RQRFR F Y ++ GPR+AL QL ELC+QWL+P +KEQILELLV EQFL LP
Sbjct: 124 DPEAARQRFRQFRYKDMTGPREALDQLRELCHQWLQPKARSKEQILELLVLEQFLGALPV 183
Query: 107 EIRIWVKSQHPESSEEVVTLIEDLTQMLEEKD-PVSQDS--------TVSQEENSKEDKM 157
++R WV+SQHPE+ +EVV L+E +T M EE+ P Q + +Q+E +ED
Sbjct: 184 KLRTWVESQHPENCQEVVALVEGVTWMSEEEVLPAGQPAEGTTCCLEVTAQQEEKQED-- 241
Query: 158 VTVCPNTESCES-ITLKDVAVNFSRGEWKKLEPFQKELYKEVLLENLRNL 206
+CP T E +T +DVAV+FSR EW L P Q+ Y++V+LE +L
Sbjct: 242 AAICPVTVLPEEPVTFQDVAVDFSREEWGLLGPTQRTEYRDVMLETFGHL 291
Score = 55.8 bits (133), Expect = 3e-08
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 157 MVTVCPNTESCESITLKDVAVNFSRGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKL 216
M + P SCE +T +DV + F+ EW L+ QK LY+EV+LEN RNL +++P +L
Sbjct: 1 MASRLPTAWSCEPVTFEDVTLGFTPEEWGLLDLKQKSLYREVMLENYRNLVSVEYPELQL 60
Query: 217 E 217
+
Sbjct: 61 D 61
>gi|19743798 zinc finger protein 274 isoform b [Homo sapiens]
Length = 548
Score = 149 bits (375), Expect = 3e-36
Identities = 83/170 (48%), Positives = 111/170 (65%), Gaps = 12/170 (7%)
Query: 47 DAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPG 106
D E+ RQRFR F Y ++ GPR+AL QL ELC+QWL+P +KEQILELLV EQFL LP
Sbjct: 51 DPEAARQRFRQFRYKDMTGPREALDQLRELCHQWLQPKARSKEQILELLVLEQFLGALPV 110
Query: 107 EIRIWVKSQHPESSEEVVTLIEDLTQMLEEKD-PVSQDS--------TVSQEENSKEDKM 157
++R WV+SQHPE+ +EVV L+E +T M EE+ P Q + +Q+E +ED
Sbjct: 111 KLRTWVESQHPENCQEVVALVEGVTWMSEEEVLPAGQPAEGTTCCLEVTAQQEEKQED-- 168
Query: 158 VTVCPNTESCES-ITLKDVAVNFSRGEWKKLEPFQKELYKEVLLENLRNL 206
+CP T E +T +DVAV+FSR EW L P Q+ Y++V+LE +L
Sbjct: 169 AAICPVTVLPEEPVTFQDVAVDFSREEWGLLGPTQRTEYRDVMLETFGHL 218
>gi|197383784 zinc finger protein 213 [Homo sapiens]
Length = 459
Score = 148 bits (374), Expect = 4e-36
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 39/212 (18%)
Query: 33 TSGEQEAILRGNAADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQIL 92
+S EQE+ + D+E+ RQRFR FCY +V GP +A SQLWELC +WLRP++ TKEQIL
Sbjct: 26 SSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPHEAFSQLWELCCRWLRPELRTKEQIL 85
Query: 93 ELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQM----------LEEKDP--- 139
ELLV EQFLT+LPGEI+ WV+ QHP S EE V L+EDL + EE +P
Sbjct: 86 ELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALVEDLQKQPVKAWRQDVPSEEAEPEAA 145
Query: 140 --------------VSQDSTVSQEENSKEDKMVTVC------PNTESC------ESITLK 173
+ +V QE++S + + T++C + L
Sbjct: 146 GRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPALLKEGRPGETTDTCFVSGVHGPVALG 205
Query: 174 DVAVNFSRGEWKKLEPFQKELYKEVLLENLRN 205
D+ FSR EW L+P Q++L+ ++ EN RN
Sbjct: 206 DIPFYFSREEWGTLDPAQRDLFWDIKRENSRN 237
>gi|32698678 zinc finger protein 213 [Homo sapiens]
Length = 459
Score = 148 bits (374), Expect = 4e-36
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 39/212 (18%)
Query: 33 TSGEQEAILRGNAADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQIL 92
+S EQE+ + D+E+ RQRFR FCY +V GP +A SQLWELC +WLRP++ TKEQIL
Sbjct: 26 SSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPHEAFSQLWELCCRWLRPELRTKEQIL 85
Query: 93 ELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQM----------LEEKDP--- 139
ELLV EQFLT+LPGEI+ WV+ QHP S EE V L+EDL + EE +P
Sbjct: 86 ELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALVEDLQKQPVKAWRQDVPSEEAEPEAA 145
Query: 140 --------------VSQDSTVSQEENSKEDKMVTVC------PNTESC------ESITLK 173
+ +V QE++S + + T++C + L
Sbjct: 146 GRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPALLKEGRPGETTDTCFVSGVHGPVALG 205
Query: 174 DVAVNFSRGEWKKLEPFQKELYKEVLLENLRN 205
D+ FSR EW L+P Q++L+ ++ EN RN
Sbjct: 206 DIPFYFSREEWGTLDPAQRDLFWDIKRENSRN 237
>gi|109715825 zinc finger protein 690 [Homo sapiens]
Length = 852
Score = 145 bits (367), Expect = 3e-35
Identities = 85/197 (43%), Positives = 123/197 (62%), Gaps = 10/197 (5%)
Query: 38 EAILRGNAADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVF 97
++ LR N ++E+FRQRFR F Y EVAGPR+A SQLWELC +WLRP++ TKEQI+ELLV
Sbjct: 4 KSALRENGTNSETFRQRFRRFHYQEVAGPREAFSQLWELCCRWLRPEVRTKEQIVELLVL 63
Query: 98 EQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKM 157
EQFLT+LPGEI+ WV+ Q PE+ EE VTL+EDL E++P S+V+ +E ++
Sbjct: 64 EQFLTVLPGEIQNWVQEQCPENGEEAVTLVEDL-----EREPGRPRSSVTVSVKGQEVRL 118
Query: 158 VTVCPNTESCESITLKDVAVN-FSRGEWKKLEPFQKELYKEVLL---ENLRNLEFLDFPV 213
+ P S E ++++ +V RG KK +L + + E L+ + P
Sbjct: 119 EKMTPPKSSQELLSVRQESVEPQPRGVPKKERARSPDLGPQEQMNPKEKLKPFQRSGLPF 178
Query: 214 SKLELISQLKWVELPWL 230
K ++S+L+ E PW+
Sbjct: 179 PKSGVVSRLEQGE-PWI 194
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 139 bits (351), Expect = 2e-33
Identities = 78/154 (50%), Positives = 97/154 (62%), Gaps = 6/154 (3%)
Query: 7 LNKMTAISPEPQTLASTEQNEVPRVVTSGE-----QEAILRGNAA-DAESFRQRFRWFCY 60
+ ++ + P A EQ E+ +V E QE+ LR N + E RQRFR FCY
Sbjct: 1 MEAVSRVFPALAGQAPEEQGEIIKVKVKEEDHTWDQESALRRNLSYTRELSRQRFRQFCY 60
Query: 61 SEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESS 120
E GPR+ALSQL ELC QWL P+IHTKEQILELLV EQFLTILP E++ WV+ +PES
Sbjct: 61 QETPGPREALSQLRELCRQWLNPEIHTKEQILELLVLEQFLTILPEELQSWVREHNPESG 120
Query: 121 EEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKE 154
EEVVTL+EDL + L+E T QE + +E
Sbjct: 121 EEVVTLLEDLERELDEPRQQVSQGTYGQEVSMEE 154
>gi|41281749 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 137 bits (344), Expect = 1e-32
Identities = 76/142 (53%), Positives = 92/142 (64%), Gaps = 6/142 (4%)
Query: 20 LASTEQNEVPRVVTSGE-----QEAILRGNA-ADAESFRQRFRWFCYSEVAGPRKALSQL 73
+ASTE+ ++V E QE LRGN + E+ RQ FR FCY E GPR+ALS+L
Sbjct: 1 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFCYQETPGPREALSRL 60
Query: 74 WELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQM 133
ELC+QWLRP+IHTKEQILELLV EQFLTILP E++ WV+ HPES EE V ++EDL Q
Sbjct: 61 RELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAVVEDLEQE 120
Query: 134 LEEKDPVSQDSTVSQEENSKED 155
L E + D E ED
Sbjct: 121 LSEPGNQAPDHEHGHSEVLLED 142
>gi|206725432 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 137 bits (344), Expect = 1e-32
Identities = 76/142 (53%), Positives = 92/142 (64%), Gaps = 6/142 (4%)
Query: 20 LASTEQNEVPRVVTSGE-----QEAILRGNA-ADAESFRQRFRWFCYSEVAGPRKALSQL 73
+ASTE+ ++V E QE LRGN + E+ RQ FR FCY E GPR+ALS+L
Sbjct: 1 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFCYQETPGPREALSRL 60
Query: 74 WELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQM 133
ELC+QWLRP+IHTKEQILELLV EQFLTILP E++ WV+ HPES EE V ++EDL Q
Sbjct: 61 RELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAVVEDLEQE 120
Query: 134 LEEKDPVSQDSTVSQEENSKED 155
L E + D E ED
Sbjct: 121 LSEPGNQAPDHEHGHSEVLLED 142
>gi|206725430 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 137 bits (344), Expect = 1e-32
Identities = 76/142 (53%), Positives = 92/142 (64%), Gaps = 6/142 (4%)
Query: 20 LASTEQNEVPRVVTSGE-----QEAILRGNA-ADAESFRQRFRWFCYSEVAGPRKALSQL 73
+ASTE+ ++V E QE LRGN + E+ RQ FR FCY E GPR+ALS+L
Sbjct: 1 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFCYQETPGPREALSRL 60
Query: 74 WELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQM 133
ELC+QWLRP+IHTKEQILELLV EQFLTILP E++ WV+ HPES EE V ++EDL Q
Sbjct: 61 RELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAVVEDLEQE 120
Query: 134 LEEKDPVSQDSTVSQEENSKED 155
L E + D E ED
Sbjct: 121 LSEPGNQAPDHEHGHSEVLLED 142
>gi|206725428 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 137 bits (344), Expect = 1e-32
Identities = 76/142 (53%), Positives = 92/142 (64%), Gaps = 6/142 (4%)
Query: 20 LASTEQNEVPRVVTSGE-----QEAILRGNA-ADAESFRQRFRWFCYSEVAGPRKALSQL 73
+ASTE+ ++V E QE LRGN + E+ RQ FR FCY E GPR+ALS+L
Sbjct: 1 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFCYQETPGPREALSRL 60
Query: 74 WELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQM 133
ELC+QWLRP+IHTKEQILELLV EQFLTILP E++ WV+ HPES EE V ++EDL Q
Sbjct: 61 RELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAVVEDLEQE 120
Query: 134 LEEKDPVSQDSTVSQEENSKED 155
L E + D E ED
Sbjct: 121 LSEPGNQAPDHEHGHSEVLLED 142
>gi|254281232 zinc finger and SCAN domain containing 12 [Homo
sapiens]
Length = 611
Score = 135 bits (339), Expect = 5e-32
Identities = 67/117 (57%), Positives = 83/117 (70%)
Query: 33 TSGEQEAILRGNAADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQIL 92
T+ + + + N E FRQ FR FCY E +GPR+ALS+L ELC+QWLRP+ HTKEQIL
Sbjct: 27 TTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGPREALSRLRELCHQWLRPETHTKEQIL 86
Query: 93 ELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQE 149
ELLV EQFLTILP E++ WV+ QHPES EEVVT++EDL + L+E T QE
Sbjct: 87 ELLVLEQFLTILPEELQAWVQEQHPESGEEVVTVLEDLERELDEPGEQVSVHTGEQE 143
>gi|171906553 zinc finger with KRAB and SCAN domains 3 [Homo
sapiens]
Length = 538
Score = 130 bits (326), Expect = 1e-30
Identities = 77/177 (43%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
Query: 7 LNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNA-ADAESFRQRFRWFCYSEVAG 65
L++ TA+ + STE V+ E+EA + +E R+RFR F Y E AG
Sbjct: 5 LSESTALDAQ-----STEDQMELLVIKVEEEEAGFPSSPDLGSEGSRERFRGFRYPEAAG 59
Query: 66 PRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVT 125
PR+ALS+L ELC QWL+P++H+KEQILELLV EQFLTILPG ++ WV+ QHPES EEVV
Sbjct: 60 PREALSRLRELCRQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVV 119
Query: 126 LIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVNFSRG 182
L+E L + L+E P QE + ++T P ++S + +K + + S G
Sbjct: 120 LLEYLERQLDEPAPQVSGVDQGQELLCCKMALLTPAPGSQSSQFQLMKALLKHESVG 176
>gi|190883486 zinc finger protein 390 [Homo sapiens]
Length = 389
Score = 129 bits (324), Expect = 2e-30
Identities = 64/120 (53%), Positives = 80/120 (66%)
Query: 35 GEQEAILRGNAADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILEL 94
G + + R N E FR+RFR FCY E GPR+AL +L ELC+QWLRP++HTKEQILEL
Sbjct: 31 GPESGLSRNNPHTREIFRRRFRQFCYQESPGPREALQRLQELCHQWLRPEMHTKEQILEL 90
Query: 95 LVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKE 154
LV EQFLTILP E++ WV+ P S EE VT++EDL + L++ QEE KE
Sbjct: 91 LVLEQFLTILPEELQAWVRQHRPVSGEEAVTVLEDLERELDDPGEQVLSHAHEQEEFVKE 150
>gi|13376834 zinc finger and SCAN domain containing 16 [Homo
sapiens]
Length = 348
Score = 126 bits (317), Expect = 2e-29
Identities = 63/125 (50%), Positives = 86/125 (68%), Gaps = 5/125 (4%)
Query: 49 ESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEI 108
E +RQ FR CY + GPR+AL+QLWELC QWLRP+ HTKEQIL+LLV EQFL+ILP ++
Sbjct: 38 ELYRQHFRKLCYQDAPGPREALTQLWELCRQWLRPECHTKEQILDLLVLEQFLSILPKDL 97
Query: 109 RIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCE 168
+ WV++ HPE+ EE VT++EDL + L+E P Q S+ + DK+ P E
Sbjct: 98 QAWVRAHHPETGEEAVTVLEDLERELDE--PGKQVPGNSERRDILMDKL---APLGRPYE 152
Query: 169 SITLK 173
S+T++
Sbjct: 153 SLTVQ 157
>gi|57863253 zinc finger protein 500 [Homo sapiens]
Length = 480
Score = 126 bits (317), Expect = 2e-29
Identities = 66/122 (54%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 13 ISPEPQTLASTEQNEVPRVVTSG----EQEAILRGNAADAESFRQRFRWFCYSEVAGPRK 68
+ P P EQ E+ V E+E + E+FRQ FR FCY EVAGPR+
Sbjct: 7 LQPLPTLEQDLEQEEILIVKVEEDFCLEEEPSVETEDPSPETFRQLFRLFCYQEVAGPRE 66
Query: 69 ALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIE 128
ALS+LWELC +WLRP++ TKEQILELLV EQFLT+LPGEI+ V+ Q PES EE V L+E
Sbjct: 67 ALSRLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQARVREQQPESGEEAVVLVE 126
Query: 129 DL 130
L
Sbjct: 127 GL 128
>gi|17738285 zinc finger with KRAB and SCAN domains 4 [Homo sapiens]
Length = 545
Score = 125 bits (315), Expect = 3e-29
Identities = 68/138 (49%), Positives = 89/138 (64%)
Query: 45 AADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTIL 104
A E RQRFR F Y E AGPR+ALS+L ELC QWL+P++H+KEQILELLV EQFLTIL
Sbjct: 46 ARGPERSRQRFRGFRYPEAAGPREALSRLRELCGQWLQPEMHSKEQILELLVLEQFLTIL 105
Query: 105 PGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNT 164
PG ++ WV+ QHPES EEVV L+E L + L+E P QE + ++T +
Sbjct: 106 PGNLQSWVREQHPESGEEVVVLLEYLERQLDEPAPQVPVGDQGQELLCCKMALLTQTQGS 165
Query: 165 ESCESITLKDVAVNFSRG 182
+S + +K + + S G
Sbjct: 166 QSSQCQPMKALFKHESLG 183
>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 125 bits (315), Expect = 3e-29
Identities = 92/256 (35%), Positives = 120/256 (46%), Gaps = 67/256 (26%)
Query: 23 TEQNEV----PRVVTSGEQEAIL-------------RGNAADAESFRQRFRWFCYSEVAG 65
TE EV P TS EQE + N E+F QRFR F Y E +G
Sbjct: 4 TESREVIDLDPPAETSQEQEDLFIVKVEEEDCTWMQEYNPPTFETFYQRFRHFQYHEASG 63
Query: 66 PRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVT 125
PR+ALSQL LC +WLRP++HTKEQILELLV EQFLTILP E + WV+ HPES EE V
Sbjct: 64 PREALSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQPWVREHHPESGEEAVA 123
Query: 126 LIEDLTQMLEEK---------------------------DPVSQDSTVSQ--------EE 150
+IE++ + LEE+ P++ D+ Q EE
Sbjct: 124 VIENIQRELEERRQQIVACPDVLPRKMATPGAVQESCSPHPLTVDTQPEQAPQKPRLLEE 183
Query: 151 NSKEDKMVTVCPNTESCESIT---------------LKDVAVNFSRGEWKKLEPFQKELY 195
N+ V P +S E + DVAV+F EW L+ QK LY
Sbjct: 184 NALPVLQVPSLPLKDSQELTASLLSTGSQKLVKIEEVADVAVSFILEEWGHLDQSQKSLY 243
Query: 196 KEVLLENLRNLEFLDF 211
++ EN ++ + +
Sbjct: 244 RDDRKENYGSITSMGY 259
>gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 125 bits (315), Expect = 3e-29
Identities = 92/256 (35%), Positives = 120/256 (46%), Gaps = 67/256 (26%)
Query: 23 TEQNEV----PRVVTSGEQEAIL-------------RGNAADAESFRQRFRWFCYSEVAG 65
TE EV P TS EQE + N E+F QRFR F Y E +G
Sbjct: 4 TESREVIDLDPPAETSQEQEDLFIVKVEEEDCTWMQEYNPPTFETFYQRFRHFQYHEASG 63
Query: 66 PRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVT 125
PR+ALSQL LC +WLRP++HTKEQILELLV EQFLTILP E + WV+ HPES EE V
Sbjct: 64 PREALSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQPWVREHHPESGEEAVA 123
Query: 126 LIEDLTQMLEEK---------------------------DPVSQDSTVSQ--------EE 150
+IE++ + LEE+ P++ D+ Q EE
Sbjct: 124 VIENIQRELEERRQQIVACPDVLPRKMATPGAVQESCSPHPLTVDTQPEQAPQKPRLLEE 183
Query: 151 NSKEDKMVTVCPNTESCESIT---------------LKDVAVNFSRGEWKKLEPFQKELY 195
N+ V P +S E + DVAV+F EW L+ QK LY
Sbjct: 184 NALPVLQVPSLPLKDSQELTASLLSTGSQKLVKIEEVADVAVSFILEEWGHLDQSQKSLY 243
Query: 196 KEVLLENLRNLEFLDF 211
++ EN ++ + +
Sbjct: 244 RDDRKENYGSITSMGY 259
>gi|27544931 zinc finger protein 38 [Homo sapiens]
Length = 473
Score = 125 bits (313), Expect = 5e-29
Identities = 70/139 (50%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Query: 49 ESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEI 108
E FRQRFR F Y + GPR+ALSQL LC +WLRP+IHTKEQILELLV EQFLTILP E+
Sbjct: 42 EMFRQRFRQFGYHDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQEL 101
Query: 109 RIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTVCPNTESCE 168
+ WV+ PES+EE VTL+EDL + L+E P Q ST E+ +K+ + ES
Sbjct: 102 QAWVQEHCPESAEEAVTLLEDLERELDE--PGHQVSTPPNEQKPVWEKISSSGTAKESPS 159
Query: 169 SITLKDVAVNFSRGEWKKL 187
S+ + + + W L
Sbjct: 160 SMQPQPLETSHKYESWGPL 178
>gi|163644333 zinc finger protein 397 opposite strand [Homo sapiens]
Length = 494
Score = 124 bits (312), Expect = 6e-29
Identities = 62/114 (54%), Positives = 83/114 (72%), Gaps = 2/114 (1%)
Query: 36 EQEAILRGNAADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELL 95
+Q+ L+ N E FRQ+FR F YS+ GPR+ALS+L ELC QWLRP++H+KEQILELL
Sbjct: 32 DQDFGLQENPWSQEVFRQKFRQFSYSDSTGPREALSRLRELCCQWLRPEVHSKEQILELL 91
Query: 96 VFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQE 149
+ EQFL ILP E++ W++ PE+ EE VT++E+L + LEE P QD+T QE
Sbjct: 92 MLEQFLAILPEELQAWLREHRPENGEEAVTMLEELEKELEE--PRQQDTTHGQE 143
>gi|4508001 zinc finger protein 165 [Homo sapiens]
Length = 485
Score = 123 bits (309), Expect = 1e-28
Identities = 65/134 (48%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Query: 3 AVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCYSE 62
A P SPE + L + E + G+ + R E RQ FR FCY +
Sbjct: 2 ATEPKKAAAQNSPEDEGLLIVKIEEEEFI--HGQDTCLQRSELLKQELCRQLFRQFCYQD 59
Query: 63 VAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEE 122
GPR+ALS+L ELC QWL+P+IHTKEQILELLV EQFLTILPG+++ WV +PES EE
Sbjct: 60 SPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEE 119
Query: 123 VVTLIEDLTQMLEE 136
VT++EDL + +E
Sbjct: 120 AVTILEDLERGTDE 133
>gi|206597472 zinc finger protein 397 isoform 1 [Homo sapiens]
Length = 534
Score = 123 bits (309), Expect = 1e-28
Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 2/94 (2%)
Query: 49 ESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEI 108
E FRQ+FR FCY E GPR+ALS+L ELC QWL P++HTKEQILELLV EQFL+ILP E+
Sbjct: 47 ELFRQQFRKFCYQETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEEL 106
Query: 109 RIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQ 142
+IWV+ +PES EE VTL+EDL + E DP Q
Sbjct: 107 QIWVQQHNPESGEEAVTLLEDLER--EFDDPGQQ 138
>gi|14150143 zinc finger protein 397 isoform 2 [Homo sapiens]
Length = 275
Score = 123 bits (309), Expect = 1e-28
Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 2/94 (2%)
Query: 49 ESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEI 108
E FRQ+FR FCY E GPR+ALS+L ELC QWL P++HTKEQILELLV EQFL+ILP E+
Sbjct: 47 ELFRQQFRKFCYQETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEEL 106
Query: 109 RIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQ 142
+IWV+ +PES EE VTL+EDL + E DP Q
Sbjct: 107 QIWVQQHNPESGEEAVTLLEDLER--EFDDPGQQ 138
>gi|190610012 zinc finger protein 24 [Homo sapiens]
Length = 368
Score = 122 bits (305), Expect = 4e-28
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 27/156 (17%)
Query: 22 STEQNEVPRVVTSGEQEAILR-----------------GNAADAESFRQRFRWFCYSEVA 64
S E++ + + T E+E ILR + D E FRQRFR F Y +
Sbjct: 5 SVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGYQDSP 64
Query: 65 GPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVV 124
GPR+A+SQL ELC WLRP+ HTKEQILEL+V EQF+ ILP E++ WV+ HPE+ EE V
Sbjct: 65 GPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENGEEAV 124
Query: 125 TLIEDLTQMLEE----------KDPVSQDSTVSQEE 150
T++EDL L++ K V + VSQEE
Sbjct: 125 TVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEE 160
>gi|55769564 zinc finger protein 36 [Homo sapiens]
Length = 563
Score = 121 bits (303), Expect = 7e-28
Identities = 56/84 (66%), Positives = 69/84 (82%)
Query: 47 DAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPG 106
D E FRQRFR FCY GPR+ALS+L ELC+QWLRP+I+TKEQILELLV EQFL+ILP
Sbjct: 51 DPEIFRQRFRRFCYQNTFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPK 110
Query: 107 EIRIWVKSQHPESSEEVVTLIEDL 130
E+++W++ P+S EE VTL+EDL
Sbjct: 111 ELQVWLQEYRPDSGEEAVTLLEDL 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,462,655
Number of Sequences: 37866
Number of extensions: 394548
Number of successful extensions: 2081
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1430
Number of HSP's gapped (non-prelim): 654
length of query: 256
length of database: 18,247,518
effective HSP length: 100
effective length of query: 156
effective length of database: 14,460,918
effective search space: 2255903208
effective search space used: 2255903208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.