Guide to the Human Genome
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Name: ZNF483 Sequence: fasta or formatted (256aa) NCBI GI: 55741870
Description:

zinc finger protein 483 isoform b

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [744aa] zinc finger protein 483 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         12           2
 C cysteine            1.6          4           1
 D aspartate           3.5          9           1
 E glutamate          13.7         35           2
 F phenylalanine       3.9         10           1
 G glycine             2.3          6           1
 H histidine           1.2          3           1
 I isoleucine          4.3         11           1
 K lysine              6.6         17           2
 L leucine            11.7         30           2
 M methionine          2.3          6           1
 N asparagine          3.5          9           1
 P proline             5.1         13           1
 Q glutamine           6.2         16           1
 R arginine            4.3         11           1
 S serine              8.6         22           2
 T threonine           4.7         12           1
 V valine              8.2         21           2
 W tryptophan          2.7          7           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 483 isoform b 
ZNF483                0.940   zinc finger protein 483 isoform a 
ZNF215                0.348   zinc finger protein 215 
ZNF287                0.331   zinc finger protein 287 
ZNF274                0.255   zinc finger protein 274 isoform c 
ZNF274                0.255   zinc finger protein 274 isoform a 
ZNF274                0.255   zinc finger protein 274 isoform b 
ZNF213                0.253   zinc finger protein 213 
ZNF213                0.253   zinc finger protein 213 
ZSCAN29               0.247   zinc finger protein 690 
SCAND3                0.235   SCAN domain containing 3 
ZNF323                0.230   zinc finger protein 323 
ZNF323                0.230   zinc finger protein 323 
ZNF323                0.230   zinc finger protein 323 
ZNF323                0.230   zinc finger protein 323 
ZSCAN12               0.226   zinc finger and SCAN domain containing 12 
ZKSCAN3               0.216   zinc finger with KRAB and SCAN domains 3 
ZSCAN23               0.214   zinc finger protein 390 
ZSCAN16               0.208   zinc finger and SCAN domain containing 16 
ZNF500                0.208   zinc finger protein 500 
ZKSCAN4               0.206   zinc finger with KRAB and SCAN domains 4 
ZKSCAN5               0.206   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.206   zinc finger with KRAB and SCAN domains 5 
ZSCAN21               0.206   zinc finger protein 38 
ZNF397OS              0.204   zinc finger protein 397 opposite strand 
ZNF165                0.202   zinc finger protein 165 
ZNF397                0.202   zinc finger protein 397 isoform 1 
ZNF397                0.202   zinc finger protein 397 isoform 2 
ZNF24                 0.200   zinc finger protein 24 
ZKSCAN1               0.198   zinc finger protein 36 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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