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Search of human proteins with 55741675
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
(614 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55741675 hypothetical protein LOC22889 [Homo sapiens] 1253 0.0
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 65 2e-10
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 64 5e-10
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 59 1e-08
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 59 1e-08
gi|11386183 WAS protein family, member 2 [Homo sapiens] 59 2e-08
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 58 3e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 4e-08
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 57 4e-08
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 57 5e-08
gi|148612835 zinc finger protein 207 isoform c [Homo sapiens] 57 7e-08
gi|73808090 zinc finger protein 207 isoform b [Homo sapiens] 57 7e-08
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 56 9e-08
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 56 9e-08
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 56 9e-08
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 56 9e-08
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... 56 9e-08
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... 56 9e-08
gi|146134388 YLP motif containing 1 [Homo sapiens] 56 1e-07
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 55 1e-07
gi|119943102 CREB binding protein isoform b [Homo sapiens] 55 1e-07
gi|119943104 CREB binding protein isoform a [Homo sapiens] 55 1e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 2e-07
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 55 2e-07
gi|110349719 titin isoform N2-A [Homo sapiens] 55 2e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 2e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 55 2e-07
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 55 2e-07
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 54 3e-07
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 54 3e-07
>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
Length = 614
Score = 1253 bits (3241), Expect = 0.0
Identities = 614/614 (100%), Positives = 614/614 (100%)
Query: 1 MSAGSATHPGAGGRRSKWDQPAPAPLLFLPPAAPGGEVTSSGGSPGGTTAAPSGALDAAA 60
MSAGSATHPGAGGRRSKWDQPAPAPLLFLPPAAPGGEVTSSGGSPGGTTAAPSGALDAAA
Sbjct: 1 MSAGSATHPGAGGRRSKWDQPAPAPLLFLPPAAPGGEVTSSGGSPGGTTAAPSGALDAAA 60
Query: 61 AVAAKINAMLMAKGKLKPTQNASEKLQAPGKGLTSNKSKDDLVVAEVEINDVPLTCRNLL 120
AVAAKINAMLMAKGKLKPTQNASEKLQAPGKGLTSNKSKDDLVVAEVEINDVPLTCRNLL
Sbjct: 61 AVAAKINAMLMAKGKLKPTQNASEKLQAPGKGLTSNKSKDDLVVAEVEINDVPLTCRNLL 120
Query: 121 TRGQTQDEISRLSGAAVSTRGRFMTTEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKE 180
TRGQTQDEISRLSGAAVSTRGRFMTTEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKE
Sbjct: 121 TRGQTQDEISRLSGAAVSTRGRFMTTEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKE 180
Query: 181 IITNGVVKAATGTSPTFNGATVTVYHQPAPIAQLSPAVSQKPPFQSGMHYVQDKLFVGLE 240
IITNGVVKAATGTSPTFNGATVTVYHQPAPIAQLSPAVSQKPPFQSGMHYVQDKLFVGLE
Sbjct: 181 IITNGVVKAATGTSPTFNGATVTVYHQPAPIAQLSPAVSQKPPFQSGMHYVQDKLFVGLE 240
Query: 241 HAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHP 300
HAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHP
Sbjct: 241 HAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHP 300
Query: 301 KPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGY 360
KPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGY
Sbjct: 301 KPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGY 360
Query: 361 QSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPAST 420
QSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPAST
Sbjct: 361 QSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPAST 420
Query: 421 GQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQ 480
GQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQ
Sbjct: 421 GQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQ 480
Query: 481 HGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERDRQLMPPPAFPVTGIKTESDERNG 540
HGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERDRQLMPPPAFPVTGIKTESDERNG
Sbjct: 481 HGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERDRQLMPPPAFPVTGIKTESDERNG 540
Query: 541 SGTLTGSHDYPAKKMKTTEKGFGLVAYAADSSDEEEEHGGHKNASSFPQGWSLGYQYPSS 600
SGTLTGSHDYPAKKMKTTEKGFGLVAYAADSSDEEEEHGGHKNASSFPQGWSLGYQYPSS
Sbjct: 541 SGTLTGSHDYPAKKMKTTEKGFGLVAYAADSSDEEEEHGGHKNASSFPQGWSLGYQYPSS 600
Query: 601 QPRAKQQMPFWMAP 614
QPRAKQQMPFWMAP
Sbjct: 601 QPRAKQQMPFWMAP 614
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 64.7 bits (156), Expect = 2e-10
Identities = 52/142 (36%), Positives = 60/142 (42%), Gaps = 12/142 (8%)
Query: 327 VNQINTAVPLPGYTQPSAISSVP--PQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIV 384
+N + PLP P +P P PP P+ G P +PPP V PP P +
Sbjct: 238 MNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPP--APVVH 295
Query: 385 PPAVSL---APGVLPALPTGVPPVPTQYPITQ-VQPPASTGQSPMGGPFIPAAPVKTALP 440
PPA + APGV P P PP P +P T V PPA P G PA V P
Sbjct: 296 PPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAP 355
Query: 441 AGPQPQPQPQPPLPS---QPQA 459
P P PP PS PQA
Sbjct: 356 GVHPPAPGVHPP-PSAGVHPQA 376
Score = 54.7 bits (130), Expect = 2e-07
Identities = 41/128 (32%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVS----L 390
P PG P++ P + P+ G P V PP V PP P + PP +
Sbjct: 318 PAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP--APGVHPPPSAGVHPQ 375
Query: 391 APGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQP-QPQP 449
APGV PA P P P +P P + G P P+AP P G P P
Sbjct: 376 APGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGV 435
Query: 450 QPPLPSQP 457
PP P P
Sbjct: 436 HPPTPMPP 443
Score = 49.7 bits (117), Expect = 8e-06
Identities = 40/119 (33%), Positives = 46/119 (38%), Gaps = 5/119 (4%)
Query: 341 QPSAISSVPPQPPYY--PSNGYQSGYPVVPPPQQ--PVQPPYGVPSIVPPAVSLAPGVLP 396
+P A S+P PP P +G P PP + P PP G+P P AP P
Sbjct: 216 KPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPP 275
Query: 397 ALPTGVPPVPTQY-PITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLP 454
P PP P + P V PPAS P G PA V P P PP P
Sbjct: 276 GPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP 334
Score = 39.3 bits (90), Expect = 0.011
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 371 QQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFI 430
++P PP +P+ PP V P P L G+PP P P+ + PP G G P
Sbjct: 215 EKPPAPP-SLPA-GPPGVKRPP---PPLMNGLPPRP---PLPESLPPPPPG----GLPLP 262
Query: 431 PAAPVKTALPAGPQPQPQPQPPLP 454
P P A P+GP PQ PP P
Sbjct: 263 PMPPTGPA-PSGPPGPPQLPPPAP 285
Score = 33.5 bits (75), Expect = 0.59
Identities = 35/110 (31%), Positives = 40/110 (36%), Gaps = 20/110 (18%)
Query: 299 HPKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPP-YYPS 357
HP+ G+ A VH Q P P PSA V PQPP +PS
Sbjct: 373 HPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSA-PGVHPQPPGVHPS 431
Query: 358 NGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPT 407
N V PP P P + PP S PG +P PP PT
Sbjct: 432 NP-----GVHPPTPMP-------PMLRPPLPSEGPGNIP------PPPPT 463
Score = 32.0 bits (71), Expect = 1.7
Identities = 28/103 (27%), Positives = 34/103 (33%), Gaps = 9/103 (8%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSN-GYQSGYPVVPPPQQPVQP--------PYGVPSIVP 385
P PG P + P P +P+ P V PP + P P GV P
Sbjct: 360 PAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAP 419
Query: 386 PAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGP 428
PGV P+ P PP P + P G P P
Sbjct: 420 GVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 63.5 bits (153), Expect = 5e-10
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 20/121 (16%)
Query: 343 SAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGV 402
+A +S PQP P GY +PP QP PP VP A + PG+ P +P GV
Sbjct: 122 AASTSFQPQP-VQPQQGY------IPPMAQPGLPP------VPGAPGMPPGIPPLMP-GV 167
Query: 403 PP-VPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGP--QPQPQPQPPLPSQPQA 459
PP +P P+ PP G PMGG P + +P P P P P+P +P QA
Sbjct: 168 PPLMPGMPPVMPGMPP---GMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA 224
Query: 460 Q 460
Q
Sbjct: 225 Q 225
Score = 49.7 bits (117), Expect = 8e-06
Identities = 46/137 (33%), Positives = 60/137 (43%), Gaps = 23/137 (16%)
Query: 335 PLPGYTQPSAISSVPPQP--PYYPSNGYQSGYPVVPP------PQQPVQPPYGVP--SIV 384
P GY P A +PP P P P G P VPP P P PP +P ++
Sbjct: 134 PQQGYIPPMAQPGLPPVPGAPGMPP-GIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMM 192
Query: 385 PPAVSLAPGVLPALPTGV-PPVPTQ--YPITQVQPPASTGQSPMGGPFIPAAPVKTALPA 441
PP + P ++P +P G+ PPVP P+TQ Q ++ G + P TA
Sbjct: 193 PPGPGIPP-LMPGMPPGMPPPVPRPGIPPMTQAQAVSAPG-------ILNRPPAPTATVP 244
Query: 442 GPQPQPQPQPPLPSQPQ 458
PQP P +P PS Q
Sbjct: 245 APQP-PVTKPLFPSAGQ 260
Score = 38.5 bits (88), Expect = 0.018
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 11/108 (10%)
Query: 356 PSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVL--PALPTGVPPVPTQYPIT- 412
P G P +PP P P G+P + APG+L P PT P P Q P+T
Sbjct: 194 PGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAP-QPPVTK 252
Query: 413 -------QVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPL 453
Q+ P ++ + +A K P+ Q Q Q P+
Sbjct: 253 PLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
Score = 35.8 bits (81), Expect = 0.12
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGV-PSIVPPAVSLAPG 393
P PG Q + PP PP+ G+ G P P PPYG P +VPP G
Sbjct: 408 PQPGIPQQQGMR--PPMPPHGQYGGHHQGMPGYLP---GAMPPYGQGPPMVPP----YQG 458
Query: 394 VLPALPTGV-PPVPTQ 408
P P G+ PPV +Q
Sbjct: 459 GPPRPPMGMRPPVMSQ 474
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 59.3 bits (142), Expect = 1e-08
Identities = 56/175 (32%), Positives = 64/175 (36%), Gaps = 42/175 (24%)
Query: 322 EYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQP-PYGV 380
E S V+ N P PGY PP PPY Q YP P PQ P QP PYG
Sbjct: 4 EKSFLVSGDNYPPPNPGYPG----GPQPPMPPYA-----QPPYPGAPYPQPPFQPSPYGQ 54
Query: 381 PSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPV-KTAL 439
P G P P+ YP Q G P GG P P +
Sbjct: 55 P-------------------GYPHGPSPYP----QGGYPQGPYPQGG--YPQGPYPQEGY 89
Query: 440 PAGPQPQ------PQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTN 488
P GP PQ P PQ P P P Q + F + PD + G + P + N
Sbjct: 90 PQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPPSYYDN 144
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 59.3 bits (142), Expect = 1e-08
Identities = 56/175 (32%), Positives = 64/175 (36%), Gaps = 42/175 (24%)
Query: 322 EYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQP-PYGV 380
E S V+ N P PGY PP PPY Q YP P PQ P QP PYG
Sbjct: 4 EKSFLVSGDNYPPPNPGYPG----GPQPPMPPYA-----QPPYPGAPYPQPPFQPSPYGQ 54
Query: 381 PSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPV-KTAL 439
P G P P+ YP Q G P GG P P +
Sbjct: 55 P-------------------GYPHGPSPYP----QGGYPQGPYPQGG--YPQGPYPQEGY 89
Query: 440 PAGPQPQ------PQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTN 488
P GP PQ P PQ P P P Q + F + PD + G + P + N
Sbjct: 90 PQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPPSYYDN 144
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 58.5 bits (140), Expect = 2e-08
Identities = 47/164 (28%), Positives = 63/164 (38%), Gaps = 12/164 (7%)
Query: 300 PKPEGLAAAK---KLCENLLQTVHAEYSRFV-NQINTAVPLPGYTQPSAISSVPPQPPYY 355
P P+ +A+ E+ L AE+S V NQ + + P + + S PP PP
Sbjct: 248 PPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLG 307
Query: 356 PSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQ-- 413
G + G+ P P P P G+P PP +PG P PP P +P
Sbjct: 308 SPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPP------PPSPPSFPPHPDF 361
Query: 414 VQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
PP P +P P+ P P P P PP P P
Sbjct: 362 AAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPP 405
Score = 47.4 bits (111), Expect = 4e-05
Identities = 41/122 (33%), Positives = 45/122 (36%), Gaps = 13/122 (10%)
Query: 335 PLPGYTQPSAISSVPPQ----PPYYPSNGYQS-GYPVVP-PPQQPVQPPYGVPSIVPPAV 388
P PG+ P A PP PP P G+ S G P P PP P P + P PP
Sbjct: 312 PKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPP 371
Query: 389 SLAPGVLPALPT-----GVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGP 443
+ LP P G PP P P PP TG G P IP T P
Sbjct: 372 AADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGAD--GQPAIPPPLSDTTKPKSS 429
Query: 444 QP 445
P
Sbjct: 430 LP 431
Score = 34.3 bits (77), Expect = 0.35
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 333 AVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPY----GVPSIVPP 386
A P P P+A P PP G P PPP P PP+ G P+I PP
Sbjct: 362 AAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPP 419
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens]
Length = 1031
Score = 57.8 bits (138), Expect = 3e-08
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 46 GGTTAAPS-GALDAAAAVAAKINAMLMAKGKLKPTQNASEKLQAPGKGLTSNKSKDDLVV 104
GGT AP+ A A +A KINA L P + E+ Q G+ + + +++L
Sbjct: 883 GGTILAPTVSAKTIAEQLAEKINAKL----NYVPLEKQEEERQDGGQNESFKRYEEEL-- 936
Query: 105 AEVEINDVPLTCRNLLTRGQTQDEISRLSGAAVSTRGRFMTTEEKAKVGPGDRPLYLHVQ 164
EIND P T R +T + IS S AA++ RG + ++ K G+R +YL ++
Sbjct: 937 ---EINDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEPK--EGERKIYLAIE 991
Query: 165 GQTRELVDRAVNRIKEIITNGVVKAATGTSPTFNG 199
V +A I +I +++ PT G
Sbjct: 992 SANELAVQKAKAEITRLIKEELIRLQNSYQPTNKG 1026
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 57.4 bits (137), Expect = 4e-08
Identities = 58/212 (27%), Positives = 75/212 (35%), Gaps = 19/212 (8%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPP--PQQPVQPPYGVPSIVPPAVSLAPGVLPALP 399
P+ ++ PP P P+ G P P P P P P P S P P P
Sbjct: 986 PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP--FPKGASTPPAATPPSP 1043
Query: 400 TGVP---PVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQ 456
G P P+P P T PA+T SP GGP P+ PA P P+ P PS
Sbjct: 1044 KGSPAATPLPKGAPTT----PAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Query: 457 PQAQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEI-----EGAGSKPASSSG 511
A P + GL H T T S + + +GA + PA++
Sbjct: 1100 KGAPMP--PAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPP 1157
Query: 512 KERERDRQLMPPPAFPVTGIKTESDERNGSGT 543
+ PP P T T + G T
Sbjct: 1158 SPK-GGLATPPPKGAPTTPAATPPSPKGGLAT 1188
Score = 50.8 bits (120), Expect = 4e-06
Identities = 40/123 (32%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPP-AVSLAPG 393
P G P+ ++ PP P P+ G P P P P G P PP P
Sbjct: 1282 PHKGAPNPAVVT--PPSPKGGPATSPPKGAPTPPAATPP--SPKGSPGTPPPKGAPTPPA 1337
Query: 394 VLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAA-PVKTALPAGPQPQPQPQPP 452
V P P G P +P P ++ P T S GP PAA P PA P P+ P
Sbjct: 1338 VTPPSPKGTPTLPATTPSSKGGP---TTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPA 1394
Query: 453 LPS 455
+PS
Sbjct: 1395 IPS 1397
Score = 50.1 bits (118), Expect = 6e-06
Identities = 37/126 (29%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTG 401
P+ ++ PP P G P PPP+ PP P + ++ P P
Sbjct: 1241 PTTPAATPPSP---------KGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAV 1291
Query: 402 V-PPVPTQYPITQVQ-----PPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPS 455
V PP P P T PPA+T SP G P P PA P P+ P LP+
Sbjct: 1292 VTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPA 1351
Query: 456 QPQAQK 461
+ K
Sbjct: 1352 TTPSSK 1357
Score = 47.8 bits (112), Expect = 3e-05
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 368 PPPQQPVQPPYGVP-SIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMG 426
P + P G+P S P P P P G P P+ P PPA+T SP G
Sbjct: 918 PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPS--PKWAPTPPAATPPSPKG 975
Query: 427 GPFIPAAPVKTALPAGPQPQPQPQPPLPS 455
GP P+ PA P P+ P PS
Sbjct: 976 GPATPSPKGAPTPPAATPPSPKGGPATPS 1004
Score = 47.8 bits (112), Expect = 3e-05
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Query: 350 PQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQY 409
P P P++ G P PP P P G + P P P P G P P+
Sbjct: 925 PAPKGIPASPSPKGAPT-PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPS-- 981
Query: 410 PITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
P PPA+T SP GGP A P P+ P PP + P
Sbjct: 982 PKGAPTPPAATPPSPKGGP------------ATPSPKGAPTPPAVTPP 1017
Score = 47.8 bits (112), Expect = 3e-05
Identities = 41/130 (31%), Positives = 49/130 (37%), Gaps = 16/130 (12%)
Query: 333 AVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAP 392
A P P + P+ ++ PP P P+ G P PP P P G PA
Sbjct: 955 ATPSPKWA-PTPPAATPPSPKGGPATPSPKGAPT-PPAATPPSPKGG------PATPSPK 1006
Query: 393 GVLPALPTGVPPVP------TQYPITQVQPPASTGQSPMGGPFIPAAPV-KTALPAGPQP 445
G P P PP P T +P PPA+T SP G P P PA P
Sbjct: 1007 GA-PTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLP 1065
Query: 446 QPQPQPPLPS 455
P+ P PS
Sbjct: 1066 SPKGGPATPS 1075
Score = 47.0 bits (110), Expect = 5e-05
Identities = 39/132 (29%), Positives = 48/132 (36%), Gaps = 24/132 (18%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTG 401
P+ ++ PP P + G PP P P PS + +P P P
Sbjct: 1149 PTTPAATPPSP--------KGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1200
Query: 402 VPPVP-----TQYPITQVQPPASTGQSPMGG---------PFIPAA--PVKTALPAGPQP 445
PP P T P PA+T SP GG P PAA P PA P P
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPP 1260
Query: 446 QPQPQPPLPSQP 457
+ P PP + P
Sbjct: 1261 KGAPTPPAATPP 1272
Score = 46.6 bits (109), Expect = 7e-05
Identities = 47/169 (27%), Positives = 61/169 (36%), Gaps = 29/169 (17%)
Query: 302 PEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQ----PPY--- 354
P A L EN L ++ S T G PSA++ + P+ PP
Sbjct: 827 PVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETP 886
Query: 355 --------YPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVP 406
+P G P P P+Q P + S P P P G+P P
Sbjct: 887 TPSVVNLPFPKEG-----PATPAPKQA--PALSMTSSSPKKARATPA-----PKGIPASP 934
Query: 407 TQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPS 455
+ P PPA+T SP GGP P+ PA P P+ P PS
Sbjct: 935 S--PKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPS 981
Score = 44.7 bits (104), Expect = 3e-04
Identities = 36/125 (28%), Positives = 42/125 (33%), Gaps = 17/125 (13%)
Query: 336 LPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVP-SIVPPAVSLAPGV 394
+P P + P P P G P P P+ PP P S + +P
Sbjct: 930 IPASPSPKGAPTPPAATPPSPKGG-----PATPSPKWAPTPPAATPPSPKGGPATPSPKG 984
Query: 395 LPALPTGVPPVPTQYPIT-----QVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQP 449
P P PP P P T PPA T SP G +P T P G P
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKG------SPAATPFPKGASTPPAA 1038
Query: 450 QPPLP 454
PP P
Sbjct: 1039 TPPSP 1043
Score = 41.2 bits (95), Expect = 0.003
Identities = 51/196 (26%), Positives = 68/196 (34%), Gaps = 32/196 (16%)
Query: 283 PASGREAFEPMYIYISHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQP 342
P+S R+ P +S P LA + L I A+ +P +
Sbjct: 1520 PSSRRDPIAPTATLLSKKTPATLAPKEAL------------------IPPAMTVPSPKKT 1561
Query: 343 SAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPS----IVPPAV-SLAPGVLPA 397
AI + P + P PS+ S P V P G PS ++PPAV S +P P
Sbjct: 1562 PAIPT-PKEAPATPSSKEASSPPAVTPSTYK-----GAPSPKELLIPPAVTSPSPKEAPT 1615
Query: 398 LPTGVPPVPTQYPITQVQ--PPASTGQSPMGGPFIPAAPVKTALPAGPQ-PQPQPQPPLP 454
P PP P + P T P S +P P +P G PQ P
Sbjct: 1616 PPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAK 1675
Query: 455 SQPQAQKRRFTEELPD 470
P A K P+
Sbjct: 1676 KGPTALKEVLVAPAPE 1691
Score = 40.4 bits (93), Expect = 0.005
Identities = 40/135 (29%), Positives = 53/135 (39%), Gaps = 19/135 (14%)
Query: 333 AVPLP--GYTQPSAISSVPPQPPYYPSNGYQSGYP----VVPPPQQPVQPPYGVPSIVPP 386
A+P P T P+ I P + P P + P + PP PV S+
Sbjct: 1394 AIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPV-------SLKKA 1446
Query: 387 AVSLAPGVLPALPT--GVPPVPTQYPITQVQPPA----STGQSPMGGPFIPAAPVKTALP 440
+ AP PA P+ G P +P P + +PPA +T SP P PA LP
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP 1506
Query: 441 AGPQPQPQPQPPLPS 455
A P+ P PS
Sbjct: 1507 AVIPSSPKEVPATPS 1521
Score = 37.4 bits (85), Expect = 0.041
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 367 VPPPQQPVQPPYGVPSIVPPAVSLA-------PGVLPALPTGVPPVPTQYPIT---QVQP 416
VP +Q + P +++P + +L+ PG P LP P P Q P++ Q P
Sbjct: 9 VPATEQELPQPQAETAVLPMSSALSVTAALGQPG--PTLPPPCSPAPQQCPLSAANQASP 66
Query: 417 ---PASTGQSPMGGPFIPAAPVKTALPAGPQPQ 446
P++ +P+ PF P + TALP G P+
Sbjct: 67 FPSPSTIASTPLEVPF-PQSSSGTALPLGTAPE 98
Score = 32.3 bits (72), Expect = 1.3
Identities = 50/224 (22%), Positives = 73/224 (32%), Gaps = 35/224 (15%)
Query: 343 SAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYG--------------VPSIVPPAV 388
S ++ P P S+ G P+ P+ PP +P +V
Sbjct: 1731 STVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASV 1790
Query: 389 SLAPGVLPALPTGVPPVPTQYPITQVQP--PASTGQSPMGG----------PFIPAAPVK 436
S AP +LP PVPT P Q P P +SP P IP P+
Sbjct: 1791 SAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPIS 1850
Query: 437 TALPAGPQPQPQPQP-------PLPS--QPQAQKRRFTEELPDERESGLLGYQHGPIHMT 487
+P P P P PS QP + + + D ES + T
Sbjct: 1851 GGVPFQSVLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPELEEQDSTQAT 1910
Query: 488 NLGTGFSSQNEIEGAGSKPASSSGKERERDRQLMPPPAFPVTGI 531
++ EI+ A S E++ + + VTG+
Sbjct: 1911 TQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGV 1954
Score = 30.8 bits (68), Expect = 3.8
Identities = 31/116 (26%), Positives = 39/116 (33%), Gaps = 13/116 (11%)
Query: 330 INTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVS 389
+ A+ PG T P S P Q P +N P P P VP P + S
Sbjct: 34 VTAALGQPGPTLPPPCSPAPQQCPLSAANQASP----FPSPSTIASTPLEVP--FPQSSS 87
Query: 390 LAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQP 445
ALP G P + + PP S + P I AP P+ P
Sbjct: 88 GT-----ALPLGTAPEAPTFLPNLIGPPISPAALALASPMI--APTLKGTPSSSAP 136
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 57.4 bits (137), Expect = 4e-08
Identities = 50/164 (30%), Positives = 61/164 (37%), Gaps = 16/164 (9%)
Query: 300 PKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNG 359
P+PE A + + Y ++ N A QP + PP PP P
Sbjct: 64 PEPERTRAELEKLIQQRAVLRVSYKGSISYRNAA-----RVQPPRRGATPPAPPRAPRGA 118
Query: 360 YQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPAS 419
+ PPP P PP P + A + AP A T PP P Q P A
Sbjct: 119 PAAAAAAAPPPT-PAPPPPPAP-VAAAAPARAPRAAAAAATA-PPSPGP---AQPGPRAQ 172
Query: 420 TGQSPMGGPFIPAAPVKTALPAGPQPQPQP-----QPPLPSQPQ 458
P PAAP A PAGP+ P P +PPLP PQ
Sbjct: 173 RAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQ 216
Score = 47.4 bits (111), Expect = 4e-05
Identities = 36/111 (32%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 330 INTAVPLPGYTQPSAISSVPPQP-PYYPSNGYQSGYPVVPPPQQP-----VQPPYGVPSI 383
+ A P +A ++ PP P P P Q P+ PP P V PP G
Sbjct: 140 VAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRA 199
Query: 384 VPPAVSLAPGVLPALP-TGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAA 433
PPAV+ LP P PP Q P Q QPP G GG P +
Sbjct: 200 PPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVS 250
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 57.0 bits (136), Expect = 5e-08
Identities = 37/109 (33%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 348 VPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVP--PV 405
+ P PP P PV P P+ PP+ + VPP +AP +PTG P PV
Sbjct: 267 IAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAP-----VPTGPPMAPV 321
Query: 406 PTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLP 454
P P+ +V P + P G P P P P P P P PP P
Sbjct: 322 PPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGP 370
Score = 56.2 bits (134), Expect = 9e-08
Identities = 43/125 (34%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 348 VPPQPPYYPSNGYQSGYPVVP-PPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVP--- 403
VPP PP P P+ P PP PV PP + VPP +AP +P P P
Sbjct: 249 VPPMPPRPPMVPMPPRPPIAPMPPMAPV-PPGSRMAPVPPGPRMAP--VPPWPPMAPVPP 305
Query: 404 -----PVPTQYPITQVQPPASTGQSPMGGPFI------PAAPVKTALPAGPQPQPQPQPP 452
PVPT P+ V P + P G P P AP+ P P P P P
Sbjct: 306 WPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAP 365
Query: 453 LPSQP 457
LP P
Sbjct: 366 LPPGP 370
Score = 48.1 bits (113), Expect = 2e-05
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 15/108 (13%)
Query: 350 PQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQY 409
P+PP P P+VP P +P P + VPP +AP VPP P
Sbjct: 242 PRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAP---------VPPGPRMA 292
Query: 410 PITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
P+ P A P+ P APV T P P P P +P P
Sbjct: 293 PVPPWPPMAPV------PPWPPMAPVPTGPPMAPVPPGPPMARVPPGP 334
Score = 42.0 bits (97), Expect = 0.002
Identities = 34/113 (30%), Positives = 41/113 (36%), Gaps = 21/113 (18%)
Query: 345 ISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPP 404
++ VPP PP P + P+ P P P P VPP +A VPP
Sbjct: 291 MAPVPPWPPMAPVPPWP---PMAPVPTGPPMAP------VPPGPPMA---------RVPP 332
Query: 405 VPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
P P+ +V P P G P P P P P P P PP P
Sbjct: 333 GP---PMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVP 382
Score = 34.3 bits (77), Expect = 0.35
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGV 394
P+P + + + + PP P P P P + P PP PP L PG
Sbjct: 302 PVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGP 361
Query: 395 LPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGP 443
P P +PP P P+ TG +P+ I APV + A P
Sbjct: 362 -PMAP--LPPGPPMAPLPPRSHVPHTGLAPV---HITWAPVINSYYACP 404
>gi|148612835 zinc finger protein 207 isoform c [Homo sapiens]
Length = 494
Score = 56.6 bits (135), Expect = 7e-08
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 343 SAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPY----GVPSIVPPAVSLAPGVLPAL 398
+A +S PQP P GY +PP QP PP G+P +PP + P ++P +
Sbjct: 122 AASTSFQPQP-VQPQQGY------IPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGM 174
Query: 399 PTGVPPVPTQYPITQVQPPASTGQS---PMGGPFIPAAPVKTALPAGP--QPQPQPQPPL 453
P +P +P + + G++ PMGG P + +P P P P P+P +
Sbjct: 175 PPVMPGMPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGI 234
Query: 454 PSQPQAQ 460
P QAQ
Sbjct: 235 PPMTQAQ 241
Score = 41.6 bits (96), Expect = 0.002
Identities = 45/155 (29%), Positives = 62/155 (40%), Gaps = 43/155 (27%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYP-VVP--PPQQPVQPPY--GVP-------- 381
P GY P A +PP P + G G P ++P PP P PP G+P
Sbjct: 134 PQQGYIPPMAQPGLPPVPG---APGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGLHHQRK 190
Query: 382 ---------------SIVPPAVSLAPGVLPALPTGV-PPVPTQ--YPITQVQPPASTGQS 423
++PP + P ++P +P G+ PPVP P+TQ Q ++ G
Sbjct: 191 YTQSFCGENIMMPMGGMMPPGPGIPP-LMPGMPPGMPPPVPRPGIPPMTQAQAVSAPG-- 247
Query: 424 PMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQ 458
+ P TA PQP P +P PS Q
Sbjct: 248 -----ILNRPPAPTATVPAPQP-PVTKPLFPSAGQ 276
Score = 38.5 bits (88), Expect = 0.018
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 11/108 (10%)
Query: 356 PSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVL--PALPTGVPPVPTQYPIT- 412
P G P +PP P P G+P + APG+L P PT P P Q P+T
Sbjct: 210 PGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAP-QPPVTK 268
Query: 413 -------QVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPL 453
Q+ P ++ + +A K P+ Q Q Q P+
Sbjct: 269 PLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 316
Score = 35.8 bits (81), Expect = 0.12
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGV-PSIVPPAVSLAPG 393
P PG Q + PP PP+ G+ G P P PPYG P +VPP G
Sbjct: 424 PQPGIPQQQGMR--PPMPPHGQYGGHHQGMPGYLP---GAMPPYGQGPPMVPP----YQG 474
Query: 394 VLPALPTGV-PPVPTQ 408
P P G+ PPV +Q
Sbjct: 475 GPPRPPMGMRPPVMSQ 490
>gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]
Length = 463
Score = 56.6 bits (135), Expect = 7e-08
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 343 SAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPY----GVPSIVPPAVSLAPGVLPAL 398
+A +S PQP P GY +PP QP PP G+P +PP + P ++P +
Sbjct: 122 AASTSFQPQP-VQPQQGY------IPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGM 174
Query: 399 PTGVPPVPTQYPITQVQPPASTGQS---PMGGPFIPAAPVKTALPAGP--QPQPQPQPPL 453
P +P +P + + G++ PMGG P + +P P P P P+P +
Sbjct: 175 PPVMPGMPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGI 234
Query: 454 PSQPQAQ 460
P QAQ
Sbjct: 235 PPMTQAQ 241
Score = 45.1 bits (105), Expect = 2e-04
Identities = 47/157 (29%), Positives = 64/157 (40%), Gaps = 43/157 (27%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYP-VVP--PPQQPVQPPY--GVP-------- 381
P GY P A +PP P + G G P ++P PP P PP G+P
Sbjct: 134 PQQGYIPPMAQPGLPPVPG---APGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGLHHQRK 190
Query: 382 ---------------SIVPPAVSLAPGVLPALPTGV-PPVPTQ--YPITQVQPPASTGQS 423
++PP + P ++P +P G+ PPVP P+TQ Q ++ G
Sbjct: 191 YTQSFCGENIMMPMGGMMPPGPGIPP-LMPGMPPGMPPPVPRPGIPPMTQAQAVSAPG-- 247
Query: 424 PMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQ 460
+ P TA PQP P +P PS QAQ
Sbjct: 248 -----ILNRPPAPTATVPAPQP-PVTKPLFPSAGQAQ 278
Score = 43.9 bits (102), Expect = 4e-04
Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 356 PSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVL--PALPTGVPPVPTQYPITQ 413
P G P +PP P P G+P + APG+L P PT P P Q P+T+
Sbjct: 210 PGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAP-QPPVTK 268
Query: 414 -VQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQA 459
+ P A Q+ + GP + PA P+P P +Q A
Sbjct: 269 PLFPSAGQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTA 315
Score = 35.8 bits (81), Expect = 0.12
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGV-PSIVPPAVSLAPG 393
P PG Q + PP PP+ G+ G P P PPYG P +VPP G
Sbjct: 393 PQPGIPQQQGMR--PPMPPHGQYGGHHQGMPGYLP---GAMPPYGQGPPMVPP----YQG 443
Query: 394 VLPALPTGV-PPVPTQ 408
P P G+ PPV +Q
Sbjct: 444 GPPRPPMGMRPPVMSQ 459
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 56.2 bits (134), Expect = 9e-08
Identities = 45/129 (34%), Positives = 47/129 (36%), Gaps = 15/129 (11%)
Query: 338 GYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVP---SIVPPAVSLAPGV 394
G P PP+PP P G P PPP Q + PP P PP L PG
Sbjct: 225 GPPPPFPAGQTPPRPPLGPPG--PPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQ 282
Query: 395 ------LPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQ 448
L LP G PP Y PP G P GPF P P P GP
Sbjct: 283 PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPG----PLGPPLTLA 338
Query: 449 PQPPLPSQP 457
P P LP P
Sbjct: 339 PPPHLPGPP 347
Score = 47.4 bits (111), Expect = 4e-05
Identities = 41/118 (34%), Positives = 46/118 (38%), Gaps = 20/118 (16%)
Query: 349 PPQPPYYPSNGYQSGYPVVPPPQQPVQPPY-----GVPSIVPPAVSLAPGVLPALPT-GV 402
PP PP P G P+ PP + +PP G P PP L PG P +P G
Sbjct: 246 PPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGP 305
Query: 403 PPVPTQYPITQVQPPASTGQ------SPMGGPFIPAAPVKTALPAGPQPQPQPQPPLP 454
PP P P Q PP G P+G P A P P P P P PP P
Sbjct: 306 PPGP---PPPQQGPPPPPGPFPPRPPGPLGPPLTLAPP-----PHLPGPPPGAPPPAP 355
Score = 43.9 bits (102), Expect = 4e-04
Identities = 38/136 (27%), Positives = 45/136 (33%), Gaps = 13/136 (9%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQP--PYGVPSIVPPAVSLAP 392
P PG P ++ P + P G P PP P+ P P VP PP P
Sbjct: 253 PPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312
Query: 393 GVLPALPTGV----PPVPTQYPITQVQPPASTGQSPMGGPFIPAA-------PVKTALPA 441
P P G PP P P+T PP G P P P P + +P
Sbjct: 313 QQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPT 372
Query: 442 GPQPQPQPQPPLPSQP 457
P P P P
Sbjct: 373 SDSRGPPPTDPYGRPP 388
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/124 (32%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 334 VPLPG--YTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGV-----PSIVPP 386
V PG + QP + +PP PP P GY P PPPQQ PP G P + P
Sbjct: 277 VLFPGQPFGQPP-LGPLPPGPPP-PVPGYGPP-PGPPPPQQGPPPPPGPFPPRPPGPLGP 333
Query: 387 AVSLAPGV-LPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQP 445
++LAP LP P G PP PP ++G +P + + P P
Sbjct: 334 PLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSG--------MPTSDSRGPPPTDPYG 385
Query: 446 QPQP 449
+P P
Sbjct: 386 RPPP 389
Score = 41.6 bits (96), Expect = 0.002
Identities = 36/100 (36%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 365 PVVPPP-----QQPVQPPYGVPSIVPPAVSLAPG-VLPALPTGVPPVPTQYPITQVQPPA 418
P PPP Q P +PP G P P PG VLP G P + P + P
Sbjct: 223 PGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQ 282
Query: 419 STGQSPMGG-PFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
GQ P+G P P PV P P PQ PP P P
Sbjct: 283 PFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGP 322
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 56.2 bits (134), Expect = 9e-08
Identities = 40/117 (34%), Positives = 48/117 (41%), Gaps = 20/117 (17%)
Query: 348 VPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVL----PALPTGVP 403
+PP PP P PPQ +PP G P PP+ + P L P P+ P
Sbjct: 139 IPPPPPG----------PAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAP 188
Query: 404 PVPTQYPITQVQPPASTGQSPM---GGPFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
P P P+ + P T SP FIP AP L P P P P PP P+ P
Sbjct: 189 PPP---PVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASP 242
Score = 41.2 bits (95), Expect = 0.003
Identities = 39/153 (25%), Positives = 52/153 (33%), Gaps = 41/153 (26%)
Query: 346 SSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPV 405
++ P P S PPP P+ PP P + PPA P LP PP+
Sbjct: 368 ATAPASPRLGQSQSQADERAGTPPPAPPLPPP--APPLPPPA--------PPLPPAAPPL 417
Query: 406 PTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPS---------- 455
P A P PA KT + P +P+P PP P
Sbjct: 418 PC----------AQKAAHP------PAGFTKTPKSSSPALKPKPNPPSPENTASSAPVDW 461
Query: 456 QPQAQKRRFTEELP-----DERESGLLGYQHGP 483
+ +Q + EL RE L ++ GP
Sbjct: 462 RDPSQMEKLRNELAAYLCGSRREDRFLSHRPGP 494
Score = 38.9 bits (89), Expect = 0.014
Identities = 46/177 (25%), Positives = 62/177 (35%), Gaps = 43/177 (24%)
Query: 335 PLPGYTQPSAISSVPPQPPYY-PSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPG 393
P G PS S+ PP PP S P PP + + PP+ + S P++ P
Sbjct: 157 PPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSS---PSIPTPPD 213
Query: 394 VLPALP------TGVPPVPTQYPITQVQP-PASTGQSPMGG------------------- 427
+P P PPVP P P T P GG
Sbjct: 214 FIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATR 273
Query: 428 ---PFIPAAPVKTALPAGPQPQP--------QPQPPLPSQPQAQKRRFTEELPDERE 473
P PA P +AL GP P+P + PP P + + + +E P + E
Sbjct: 274 ASPPRSPAEPKGSAL--GPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEE 328
Score = 36.6 bits (83), Expect = 0.070
Identities = 45/155 (29%), Positives = 51/155 (32%), Gaps = 34/155 (21%)
Query: 341 QPSAISSVPPQPPYYPSNGYQSGYPV----------VPPPQQ------PVQPPYGVPSIV 384
Q A + PP+ P P P VPPP PVQ P
Sbjct: 268 QAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKE 327
Query: 385 PPAVSLAPGVLPALPT-GVPPVPTQYPITQVQP----------PAST--GQSPM-----G 426
A AP LP P+ + P YP +P PAS GQS
Sbjct: 328 EGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERA 387
Query: 427 GPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQK 461
G PA P+ P P P P P P P AQK
Sbjct: 388 GTPPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQK 422
Score = 30.8 bits (68), Expect = 3.8
Identities = 37/130 (28%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 328 NQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPA 387
N+ NT V G A V P + P N ++ VP P P V
Sbjct: 56 NRFNT-VSESGTATLKARPRVRPLLTFLPLNAQENHGLAVPTPSVPDD---FADKEVTGT 111
Query: 388 VSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQP 447
SL G L + P QY + PP G +P I P + LP+ P P
Sbjct: 112 SSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAP 171
Query: 448 QPQPPLPSQP 457
P PPL +P
Sbjct: 172 -PPPPLLLEP 180
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 56.2 bits (134), Expect = 9e-08
Identities = 40/117 (34%), Positives = 48/117 (41%), Gaps = 20/117 (17%)
Query: 348 VPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVL----PALPTGVP 403
+PP PP P PPQ +PP G P PP+ + P L P P+ P
Sbjct: 139 IPPPPPG----------PAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAP 188
Query: 404 PVPTQYPITQVQPPASTGQSPM---GGPFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
P P P+ + P T SP FIP AP L P P P P PP P+ P
Sbjct: 189 PPP---PVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASP 242
Score = 41.2 bits (95), Expect = 0.003
Identities = 39/153 (25%), Positives = 52/153 (33%), Gaps = 41/153 (26%)
Query: 346 SSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPV 405
++ P P S PPP P+ PP P + PPA P LP PP+
Sbjct: 368 ATAPASPRLGQSQSQADERAGTPPPAPPLPPP--APPLPPPA--------PPLPPAAPPL 417
Query: 406 PTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPS---------- 455
P A P PA KT + P +P+P PP P
Sbjct: 418 PC----------AQKAAHP------PAGFTKTPKSSSPALKPKPNPPSPENTASSAPVDW 461
Query: 456 QPQAQKRRFTEELP-----DERESGLLGYQHGP 483
+ +Q + EL RE L ++ GP
Sbjct: 462 RDPSQMEKLRNELAAYLCGSRREDRFLSHRPGP 494
Score = 38.9 bits (89), Expect = 0.014
Identities = 46/177 (25%), Positives = 62/177 (35%), Gaps = 43/177 (24%)
Query: 335 PLPGYTQPSAISSVPPQPPYY-PSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPG 393
P G PS S+ PP PP S P PP + + PP+ + S P++ P
Sbjct: 157 PPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSS---PSIPTPPD 213
Query: 394 VLPALP------TGVPPVPTQYPITQVQP-PASTGQSPMGG------------------- 427
+P P PPVP P P T P GG
Sbjct: 214 FIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATR 273
Query: 428 ---PFIPAAPVKTALPAGPQPQP--------QPQPPLPSQPQAQKRRFTEELPDERE 473
P PA P +AL GP P+P + PP P + + + +E P + E
Sbjct: 274 ASPPRSPAEPKGSAL--GPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEE 328
Score = 36.6 bits (83), Expect = 0.070
Identities = 45/155 (29%), Positives = 51/155 (32%), Gaps = 34/155 (21%)
Query: 341 QPSAISSVPPQPPYYPSNGYQSGYPV----------VPPPQQ------PVQPPYGVPSIV 384
Q A + PP+ P P P VPPP PVQ P
Sbjct: 268 QAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKE 327
Query: 385 PPAVSLAPGVLPALPT-GVPPVPTQYPITQVQP----------PAST--GQSPM-----G 426
A AP LP P+ + P YP +P PAS GQS
Sbjct: 328 EGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERA 387
Query: 427 GPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQK 461
G PA P+ P P P P P P P AQK
Sbjct: 388 GTPPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQK 422
Score = 30.8 bits (68), Expect = 3.8
Identities = 37/130 (28%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 328 NQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPA 387
N+ NT V G A V P + P N ++ VP P P V
Sbjct: 56 NRFNT-VSESGTATLKARPRVRPLLTFLPLNAQENHGLAVPTPSVPDD---FADKEVTGT 111
Query: 388 VSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQP 447
SL G L + P QY + PP G +P I P + LP+ P P
Sbjct: 112 SSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAP 171
Query: 448 QPQPPLPSQP 457
P PPL +P
Sbjct: 172 -PPPPLLLEP 180
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 56.2 bits (134), Expect = 9e-08
Identities = 40/117 (34%), Positives = 48/117 (41%), Gaps = 20/117 (17%)
Query: 348 VPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVL----PALPTGVP 403
+PP PP P PPQ +PP G P PP+ + P L P P+ P
Sbjct: 139 IPPPPPG----------PAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAP 188
Query: 404 PVPTQYPITQVQPPASTGQSPM---GGPFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
P P P+ + P T SP FIP AP L P P P P PP P+ P
Sbjct: 189 PPP---PVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASP 242
Score = 41.2 bits (95), Expect = 0.003
Identities = 39/153 (25%), Positives = 52/153 (33%), Gaps = 41/153 (26%)
Query: 346 SSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPV 405
++ P P S PPP P+ PP P + PPA P LP PP+
Sbjct: 368 ATAPASPRLGQSQSQADERAGTPPPAPPLPPP--APPLPPPA--------PPLPPAAPPL 417
Query: 406 PTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPS---------- 455
P A P PA KT + P +P+P PP P
Sbjct: 418 PC----------AQKAAHP------PAGFTKTPKSSSPALKPKPNPPSPENTASSAPVDW 461
Query: 456 QPQAQKRRFTEELP-----DERESGLLGYQHGP 483
+ +Q + EL RE L ++ GP
Sbjct: 462 RDPSQMEKLRNELAAYLCGSRREDRFLSHRPGP 494
Score = 38.9 bits (89), Expect = 0.014
Identities = 46/177 (25%), Positives = 62/177 (35%), Gaps = 43/177 (24%)
Query: 335 PLPGYTQPSAISSVPPQPPYY-PSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPG 393
P G PS S+ PP PP S P PP + + PP+ + S P++ P
Sbjct: 157 PPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSS---PSIPTPPD 213
Query: 394 VLPALP------TGVPPVPTQYPITQVQP-PASTGQSPMGG------------------- 427
+P P PPVP P P T P GG
Sbjct: 214 FIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATR 273
Query: 428 ---PFIPAAPVKTALPAGPQPQP--------QPQPPLPSQPQAQKRRFTEELPDERE 473
P PA P +AL GP P+P + PP P + + + +E P + E
Sbjct: 274 ASPPRSPAEPKGSAL--GPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEE 328
Score = 36.6 bits (83), Expect = 0.070
Identities = 45/155 (29%), Positives = 51/155 (32%), Gaps = 34/155 (21%)
Query: 341 QPSAISSVPPQPPYYPSNGYQSGYPV----------VPPPQQ------PVQPPYGVPSIV 384
Q A + PP+ P P P VPPP PVQ P
Sbjct: 268 QAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKE 327
Query: 385 PPAVSLAPGVLPALPT-GVPPVPTQYPITQVQP----------PAST--GQSPM-----G 426
A AP LP P+ + P YP +P PAS GQS
Sbjct: 328 EGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERA 387
Query: 427 GPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQK 461
G PA P+ P P P P P P P AQK
Sbjct: 388 GTPPPAPPLPPPAPPLPPPAPPLPPAAPPLPCAQK 422
Score = 30.8 bits (68), Expect = 3.8
Identities = 37/130 (28%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 328 NQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPA 387
N+ NT V G A V P + P N ++ VP P P V
Sbjct: 56 NRFNT-VSESGTATLKARPRVRPLLTFLPLNAQENHGLAVPTPSVPDD---FADKEVTGT 111
Query: 388 VSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQP 447
SL G L + P QY + PP G +P I P + LP+ P P
Sbjct: 112 SSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAP 171
Query: 448 QPQPPLPSQP 457
P PPL +P
Sbjct: 172 -PPPPLLLEP 180
>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
sapiens]
Length = 728
Score = 56.2 bits (134), Expect = 9e-08
Identities = 51/169 (30%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 338 GYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIV--------PPAVS 389
G ++P+ I PP PP +N S P+ P+ P PP ++V PP S
Sbjct: 481 GPSKPNEIPQQPP-PPSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRPPMAS 539
Query: 390 ---LAPG-VLPALP--------TGVPPVPTQYPITQVQPPASTGQSPMGGP--FIPAAPV 435
L PG V+ +P VP P+ PI +PP PM P F+PA PV
Sbjct: 540 VVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPP------PMIVPTAFVPAPPV 593
Query: 436 KTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPI 484
P P P PP+ +P ++K + + L E E L GP+
Sbjct: 594 APVPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEE--FLRRNKGPV 640
Score = 31.6 bits (70), Expect = 2.2
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 357 SNGYQSGYPVVPPPQQPVQPPY-GVPSIVPPAVSLAPGVLPALPTGVPPVPTQY---PIT 412
S+ + G V PPP+ P+ PP P V P LP P P +Y PIT
Sbjct: 294 SDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPA--PAPDEYLVSPIT 351
Query: 413 QVQPPASTGQSPM 425
+ PAS Q M
Sbjct: 352 GEKIPASKMQEHM 364
>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
sapiens]
Length = 793
Score = 56.2 bits (134), Expect = 9e-08
Identities = 51/169 (30%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 338 GYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIV--------PPAVS 389
G ++P+ I PP PP +N S P+ P+ P PP ++V PP S
Sbjct: 546 GPSKPNEIPQQPP-PPSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRPPMAS 604
Query: 390 ---LAPG-VLPALP--------TGVPPVPTQYPITQVQPPASTGQSPMGGP--FIPAAPV 435
L PG V+ +P VP P+ PI +PP PM P F+PA PV
Sbjct: 605 VVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPP------PMIVPTAFVPAPPV 658
Query: 436 KTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPI 484
P P P PP+ +P ++K + + L E E L GP+
Sbjct: 659 APVPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEE--FLRRNKGPV 705
Score = 31.6 bits (70), Expect = 2.2
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 357 SNGYQSGYPVVPPPQQPVQPPY-GVPSIVPPAVSLAPGVLPALPTGVPPVPTQY---PIT 412
S+ + G V PPP+ P+ PP P V P LP P P +Y PIT
Sbjct: 359 SDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPA--PAPDEYLVSPIT 416
Query: 413 QVQPPASTGQSPM 425
+ PAS Q M
Sbjct: 417 GEKIPASKMQEHM 429
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 55.8 bits (133), Expect = 1e-07
Identities = 48/136 (35%), Positives = 61/136 (44%), Gaps = 27/136 (19%)
Query: 332 TAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYP-VVPPPQ------QPVQPPYGVPSIV 384
T+VP PG P ++SS P P P + +G P V+PPP PV P + S
Sbjct: 571 TSVPPPG--MPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSAT 628
Query: 385 PPAVSLAPGV-LPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPA-- 441
PP PG+ P +P G+PP T P+ PPAS+ QS +P P LP
Sbjct: 629 PP-----PGIPPPGVPQGIPPQLTAAPV----PPASSSQSSQ----VPEKPRPALLPTPV 675
Query: 442 --GPQPQPQPQPPLPS 455
G P PPL S
Sbjct: 676 SFGSAPPTTYHPPLQS 691
Score = 50.8 bits (120), Expect = 4e-06
Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 9/146 (6%)
Query: 310 KLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPP 369
K ++ LQ + NQ + +P P S +PP P P PV+PP
Sbjct: 490 KATQSYLQEKVNSFQNMKNQYMGNMSMPPPFVP--YSQMPPPLPTMPP-------PVLPP 540
Query: 370 PQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPF 429
P P +P+ VPP P + P+LPT VPP ++ PP +
Sbjct: 541 SLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAG 600
Query: 430 IPAAPVKTALPAGPQPQPQPQPPLPS 455
P +L + P P PPL S
Sbjct: 601 PPPVLPPPSLSSTAPPPVMPLPPLSS 626
Score = 43.9 bits (102), Expect = 4e-04
Identities = 47/190 (24%), Positives = 65/190 (34%), Gaps = 37/190 (19%)
Query: 355 YPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALP--TGVPPVPTQYPIT 412
YP+ G G PPP P PP +P P + PA P +G Q+ +
Sbjct: 2 YPNWGRYGGSSHYPPPPVPPPPPVALPE-ASPGPGYSSSTTPAAPSSSGFMSFREQH-LA 59
Query: 413 QVQPPASTGQSPM---------GGPFIPAAPVKTALPAG------PQPQPQPQPPLPSQP 457
Q+Q Q M P +P PV +P G P P P P PP P+
Sbjct: 60 QLQQLQQMHQKQMQCVLQPHHLPPPPLPPPPV---MPGGGYGDWQPPPPPMPPPPGPALS 116
Query: 458 QAQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERD 517
++++ Y+H +H G E+E P G
Sbjct: 117 YQKQQQ---------------YKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPS 161
Query: 518 RQLMPPPAFP 527
+ MPPP P
Sbjct: 162 QSYMPPPQPP 171
Score = 43.5 bits (101), Expect = 6e-04
Identities = 40/134 (29%), Positives = 50/134 (37%), Gaps = 30/134 (22%)
Query: 341 QPSAISSVP-PQPPYYPSNGY---QSGYPVVPPPQQPV-----QPPY----------GVP 381
QP + P P PP P GY Q P +PPP P Q Y G P
Sbjct: 77 QPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPP 136
Query: 382 SIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPA 441
+VP + +P P +P G P+Q + QPP S P++P A
Sbjct: 137 GLVPMELE-SPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPA-------- 187
Query: 442 GPQPQPQPQPPLPS 455
QP P PP S
Sbjct: 188 --QPSPSQSPPSQS 199
Score = 43.1 bits (100), Expect = 7e-04
Identities = 61/223 (27%), Positives = 79/223 (35%), Gaps = 28/223 (12%)
Query: 330 INTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQ-PPYGVPSIVPPAV 388
+++A P P PS S+ PP P + P +PPP P PP + VPPA
Sbjct: 596 LSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPAS 655
Query: 389 SLAPGVLPALP-TGVPPVPTQY----PITQVQPPASTGQSPMGGPFIPAAPVKTALPAGP 443
S +P P + P P + P T P S G S P + K+ALP
Sbjct: 656 SSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSKAPLS--KSALPYSS 713
Query: 444 QPQPQ---PQPPLPSQPQAQKR----RFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQ 496
Q PSQP + R LPD S L GP F
Sbjct: 714 FSSDQGLGESSAAPSQPITAVKDMPVRSGGLLPDPPRSSYLESPRGP--------RFDGP 765
Query: 497 NEIEGAGSK--PASSSGKERERDRQLMPPPAF---PVTGIKTE 534
E GS+ G E +R P P + P G K++
Sbjct: 766 RRFEDLGSRCEGPRPKGPRFEGNRPDGPRPRYEGHPAEGTKSK 808
Score = 42.7 bits (99), Expect = 0.001
Identities = 52/215 (24%), Positives = 76/215 (35%), Gaps = 34/215 (15%)
Query: 334 VPLPGYTQPSAISSVPPQPP--YYPSNGYQSGYPVVPPPQ-QPVQPPYGVPSIVPPA--- 387
VP Y PS PPQPP YYP S P +PP Q P Q P + P
Sbjct: 152 VPPGSYMPPSQSYMPPPQPPPSYYPPT---SSQPYLPPAQPSPSQSPPSQSYLAPTPSYS 208
Query: 388 ---------VSLAPGVLPALPTGVPPVPTQ-YPITQVQPPASTGQSPMGGPFIPAAPVKT 437
+S + LP+ P P+Q + +Q+ P P + P+++
Sbjct: 209 SSSSSSQSYLSHSQSYLPSSQAS-PSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPLES 267
Query: 438 AL--------PAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTNL 489
A P+P P P Q Q R+ L + L G++ GP+ +
Sbjct: 268 GAKNKSTEQQQAAPEPDPSTMTP-QEQQQYWYRQHLLSLQQRTKVHLPGHKKGPVVAKDT 326
Query: 490 GTGFSSQNEIEGAGSKPASSSGKERERDRQLMPPP 524
+ + P S S +E +PPP
Sbjct: 327 PEPVKEEVTVPATSQVPESPSSEEPP-----LPPP 356
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 14/132 (10%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTG 401
P + S P PP P + +PPPQ P PS PP S P + PA P+
Sbjct: 140 PMELESPPESPPVPPGSYMPPSQSYMPPPQPP-------PSYYPP-TSSQPYLPPAQPSP 191
Query: 402 VPPVPTQ---YPITQVQPPASTGQSPM--GGPFIPAAPVKTALPA-GPQPQPQPQPPLPS 455
P+Q P +S+ QS + ++P++ + P+ G PP PS
Sbjct: 192 SQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPS 251
Query: 456 QPQAQKRRFTEE 467
P K +E
Sbjct: 252 APPGNKTTVQQE 263
Score = 40.8 bits (94), Expect = 0.004
Identities = 41/161 (25%), Positives = 56/161 (34%), Gaps = 42/161 (26%)
Query: 340 TQPSAISSVPPQPPYYPSNGYQSG-YPVVPPPQQPVQPPYGVP--SIV----PPAVSLAP 392
++P +PPQ + + G YP PP PP G P SIV PPA S P
Sbjct: 1481 SEPQMADHLPPQESRLQNTSSRPGMYP--PPGSYRPPPPMGKPPGSIVRPSAPPARSSVP 1538
Query: 393 GVLPALPTGVPPVPTQYPITQ--VQPPASTGQSPM------------------------- 425
P +P PP P P ++P S +
Sbjct: 1539 VTRPPVPIPPPPPPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSE 1598
Query: 426 -----GGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQK 461
P +P PV +++P P P P PP+ P Q+
Sbjct: 1599 TAAIPSAPVLPPPPVHSSIPP-PGPVPMGMPPMSKPPPVQQ 1638
Score = 34.7 bits (78), Expect = 0.27
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Query: 401 GVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAP-----VKTALPAGPQPQPQPQPPLPS 455
G+ P P Y +PP G+ P G P+AP V P P P P P PPLP
Sbjct: 1504 GMYPPPGSY-----RPPPPMGKPP-GSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPP 1557
Query: 456 QPQAQKRRFTEELPDER 472
P K + T + ER
Sbjct: 1558 PPPVIKPQ-TSAVEQER 1573
Score = 33.5 bits (75), Expect = 0.59
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 19/106 (17%)
Query: 367 VPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMG 426
+PP + +Q P + PP S P PP + P + V+P A +S
Sbjct: 1489 LPPQESRLQNTSSRPGMYPPPGSYRP----------PPPMGKPPGSIVRPSAPPARS--- 1535
Query: 427 GPFIPAAPV-KTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDE 471
+ PV + +P P P P P PP P + Q +E DE
Sbjct: 1536 -----SVPVTRPPVPIPPPPPPPPLPPPPPVIKPQTSAVEQERWDE 1576
Score = 30.4 bits (67), Expect = 5.0
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 379 GVPSIVPPAV--SLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVK 436
G S+ PP V S P LP +P V P P+ PA+ M P +P +
Sbjct: 512 GNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPT 571
Query: 437 TALPAGPQPQ-----PQPQPPLPSQPQA 459
+ P G P P P P PS A
Sbjct: 572 SVPPPGMPPSLSSAGPPPVLPPPSLSSA 599
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 55.5 bits (132), Expect = 1e-07
Identities = 44/134 (32%), Positives = 53/134 (39%), Gaps = 19/134 (14%)
Query: 328 NQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQ----PVQPPYGVPSI 383
N++ P P P PP PP P N SG P PPP + P PP P+
Sbjct: 270 NELRRQAPPP----PPPSRGGPPPPPPPPHN---SGPP--PPPARGRGAPPPPPSRAPTA 320
Query: 384 VPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGP 443
PP P P++ PP YP PPA +P G P P + + A P
Sbjct: 321 APPP---PPPSRPSVAVPPPPPNRMYP---PPPPALPSSAPSGPPPPPPSVLGVGPVAPP 374
Query: 444 QPQPQPQPPLPSQP 457
P P P PP P P
Sbjct: 375 PPPPPPPPPGPPPP 388
Score = 30.0 bits (66), Expect = 6.5
Identities = 24/83 (28%), Positives = 27/83 (32%), Gaps = 8/83 (9%)
Query: 396 PALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPS 455
P G PP P P PP P G P P A A P P P +P +
Sbjct: 280 PPPSRGGPPPPPPPPHNSGPPPP-----PARGRGAPPPPPSRAPTAAPPPPPPSRPSVAV 334
Query: 456 QPQAQKRRF---TEELPDERESG 475
P R + LP SG
Sbjct: 335 PPPPPNRMYPPPPPALPSSAPSG 357
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 55.5 bits (132), Expect = 1e-07
Identities = 65/253 (25%), Positives = 96/253 (37%), Gaps = 43/253 (16%)
Query: 336 LPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVL 395
+PG P+ ++ + PQ P PV P P PP + +P P
Sbjct: 786 VPGAALPNPLNMLGPQASQLPCP------PVTQSPLHPTPPPASTAAGMPSLQHTTP--- 836
Query: 396 PALPTGVPPVPTQYPITQVQPPASTGQSPMGGP-FIPAAPVKTALPA---------GPQP 445
P + P PTQ P T P +S+GQ+P P +P+A + P PQP
Sbjct: 837 PGMTPPQPAAPTQ-PST---PVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQP 892
Query: 446 QPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSK 505
Q QPP + PQ+ +++ T P+H GT SQ
Sbjct: 893 QTPVQPPSVATPQSSQQQPT-----------------PVHAQPPGTPL-SQAAASIDNRV 934
Query: 506 PASSSGKERERDRQLMPPPAFPVTGIKTESDERNGSGTLTGSHDYPAKKMKTTE-KGFGL 564
P SS E + Q P P PV +KTE+ + S P +M + +G
Sbjct: 935 PTPSSVASAETNSQ-QPGPDVPVLEMKTETQAEDTEPDPGESKGEPRSEMMEEDLQGASQ 993
Query: 565 VAYAADSSDEEEE 577
V D ++++ E
Sbjct: 994 VKEETDIAEQKSE 1006
Score = 45.8 bits (107), Expect = 1e-04
Identities = 42/161 (26%), Positives = 52/161 (32%), Gaps = 43/161 (26%)
Query: 336 LPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSI--VPPAVSLAPG 393
+P + PS S+ P P PS P P P P G PS+ P +++ G
Sbjct: 1839 VPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTG 1898
Query: 394 VLPALPTGVPPVPTQYP------------------------ITQVQPPASTGQSPMGGPF 429
P PP P Q P I PP TG G
Sbjct: 1899 -KPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQM 1957
Query: 430 IP-----------AAPVKTALPAG-----PQPQPQPQPPLP 454
P + PV ++P G P PQ QP P LP
Sbjct: 1958 APVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLP 1998
Score = 40.8 bits (94), Expect = 0.004
Identities = 54/197 (27%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 298 SHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYT-QPSAISSVPPQPPYYP 356
+ P P + AA+++ Q H + IN ++P PG T + S + P P
Sbjct: 1911 AQPPPAAVEAARQIEREAQQQQHL----YRVNINNSMP-PGRTGMGTPGSQMAPVSLNVP 1965
Query: 357 SNGYQSGYPVVP--PP----QQPVQPPYGVPSIVPPAVSLA----------PGVLPALPT 400
SG PV+P PP Q P+ +P + P +S+ P V P P
Sbjct: 1966 RPNQVSG-PVMPSMPPGQWQQAPLPQQQPMPGLPRPVISMQAQAAVAGPRMPSVQP--PR 2022
Query: 401 GVPPVPTQYPITQVQPPASTGQSPM------GGPFIPAAPVK--TALPAGPQPQPQPQPP 452
+ P Q + ++ P+S Q P + AA +K TA QP QPQP
Sbjct: 2023 SISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAKYVANQPGMQPQPG 2082
Query: 453 LPSQPQAQKRRFTEELP 469
L SQP Q + + P
Sbjct: 2083 LQSQPGMQPQPGMHQQP 2099
Score = 38.9 bits (89), Expect = 0.014
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 399 PTGVPP-VPTQYPITQVQP-------PASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQ 450
PT PP PTQ P T P P+ SP G P + T + G P
Sbjct: 1847 PTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPA 1906
Query: 451 PPLPSQP 457
PP P+QP
Sbjct: 1907 PPPPAQP 1913
Score = 33.1 bits (74), Expect = 0.77
Identities = 59/255 (23%), Positives = 84/255 (32%), Gaps = 63/255 (24%)
Query: 333 AVPLPGYTQPSAISSVPPQPPYYP----------SNGYQSGYPV----VPPPQQPVQPPY 378
A+P PG P + P +PP P S G S P+ V PQ P+ P
Sbjct: 646 ALPAPGAQPPVIPQAQPVRPPNGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRA 705
Query: 379 GVP---SIVPPAVSLAPGVLPALPTGVPPVP-----------------------TQYP-- 410
P S+ ++ PG + P+ +P P Q+P
Sbjct: 706 ASPMNHSVQMNSMGSVPG-MAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSS 764
Query: 411 -----ITQVQPPASTGQSPMGGPFIPAAPVKTAL-PAGPQPQPQPQPPL------PSQPQ 458
+ QPPA TG S +P A + L GPQ P PP+ P+ P
Sbjct: 765 SGAMSVGMGQPPAQTGVSQ---GQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPP 821
Query: 459 AQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGK-----E 513
A L G+ Q + S Q GS P+++ + +
Sbjct: 822 ASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQ 881
Query: 514 RERDRQLMPPPAFPV 528
Q+ P P PV
Sbjct: 882 AAAQAQVTPQPQTPV 896
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 55.5 bits (132), Expect = 1e-07
Identities = 65/253 (25%), Positives = 96/253 (37%), Gaps = 43/253 (16%)
Query: 336 LPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVL 395
+PG P+ ++ + PQ P PV P P PP + +P P
Sbjct: 824 VPGAALPNPLNMLGPQASQLPCP------PVTQSPLHPTPPPASTAAGMPSLQHTTP--- 874
Query: 396 PALPTGVPPVPTQYPITQVQPPASTGQSPMGGP-FIPAAPVKTALPA---------GPQP 445
P + P PTQ P T P +S+GQ+P P +P+A + P PQP
Sbjct: 875 PGMTPPQPAAPTQ-PST---PVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQP 930
Query: 446 QPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSK 505
Q QPP + PQ+ +++ T P+H GT SQ
Sbjct: 931 QTPVQPPSVATPQSSQQQPT-----------------PVHAQPPGTPL-SQAAASIDNRV 972
Query: 506 PASSSGKERERDRQLMPPPAFPVTGIKTESDERNGSGTLTGSHDYPAKKMKTTE-KGFGL 564
P SS E + Q P P PV +KTE+ + S P +M + +G
Sbjct: 973 PTPSSVASAETNSQ-QPGPDVPVLEMKTETQAEDTEPDPGESKGEPRSEMMEEDLQGASQ 1031
Query: 565 VAYAADSSDEEEE 577
V D ++++ E
Sbjct: 1032 VKEETDIAEQKSE 1044
Score = 45.8 bits (107), Expect = 1e-04
Identities = 42/161 (26%), Positives = 52/161 (32%), Gaps = 43/161 (26%)
Query: 336 LPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSI--VPPAVSLAPG 393
+P + PS S+ P P PS P P P P G PS+ P +++ G
Sbjct: 1877 VPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTG 1936
Query: 394 VLPALPTGVPPVPTQYP------------------------ITQVQPPASTGQSPMGGPF 429
P PP P Q P I PP TG G
Sbjct: 1937 -KPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQM 1995
Query: 430 IP-----------AAPVKTALPAG-----PQPQPQPQPPLP 454
P + PV ++P G P PQ QP P LP
Sbjct: 1996 APVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLP 2036
Score = 40.8 bits (94), Expect = 0.004
Identities = 54/197 (27%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 298 SHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYT-QPSAISSVPPQPPYYP 356
+ P P + AA+++ Q H + IN ++P PG T + S + P P
Sbjct: 1949 AQPPPAAVEAARQIEREAQQQQHL----YRVNINNSMP-PGRTGMGTPGSQMAPVSLNVP 2003
Query: 357 SNGYQSGYPVVP--PP----QQPVQPPYGVPSIVPPAVSLA----------PGVLPALPT 400
SG PV+P PP Q P+ +P + P +S+ P V P P
Sbjct: 2004 RPNQVSG-PVMPSMPPGQWQQAPLPQQQPMPGLPRPVISMQAQAAVAGPRMPSVQP--PR 2060
Query: 401 GVPPVPTQYPITQVQPPASTGQSPM------GGPFIPAAPVK--TALPAGPQPQPQPQPP 452
+ P Q + ++ P+S Q P + AA +K TA QP QPQP
Sbjct: 2061 SISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAKYVANQPGMQPQPG 2120
Query: 453 LPSQPQAQKRRFTEELP 469
L SQP Q + + P
Sbjct: 2121 LQSQPGMQPQPGMHQQP 2137
Score = 38.9 bits (89), Expect = 0.014
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 399 PTGVPP-VPTQYPITQVQP-------PASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQ 450
PT PP PTQ P T P P+ SP G P + T + G P
Sbjct: 1885 PTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPA 1944
Query: 451 PPLPSQP 457
PP P+QP
Sbjct: 1945 PPPPAQP 1951
Score = 33.1 bits (74), Expect = 0.77
Identities = 59/255 (23%), Positives = 84/255 (32%), Gaps = 63/255 (24%)
Query: 333 AVPLPGYTQPSAISSVPPQPPYYP----------SNGYQSGYPV----VPPPQQPVQPPY 378
A+P PG P + P +PP P S G S P+ V PQ P+ P
Sbjct: 684 ALPAPGAQPPVIPQAQPVRPPNGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRA 743
Query: 379 GVP---SIVPPAVSLAPGVLPALPTGVPPVP-----------------------TQYP-- 410
P S+ ++ PG + P+ +P P Q+P
Sbjct: 744 ASPMNHSVQMNSMGSVPG-MAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSS 802
Query: 411 -----ITQVQPPASTGQSPMGGPFIPAAPVKTAL-PAGPQPQPQPQPPL------PSQPQ 458
+ QPPA TG S +P A + L GPQ P PP+ P+ P
Sbjct: 803 SGAMSVGMGQPPAQTGVSQ---GQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPP 859
Query: 459 AQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGK-----E 513
A L G+ Q + S Q GS P+++ + +
Sbjct: 860 ASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQ 919
Query: 514 RERDRQLMPPPAFPV 528
Q+ P P PV
Sbjct: 920 AAAQAQVTPQPQTPV 934
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 55.1 bits (131), Expect = 2e-07
Identities = 43/138 (31%), Positives = 54/138 (39%), Gaps = 16/138 (11%)
Query: 337 PGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLP 396
P P+A++ Q P+ P P PP PV P PS PP+++ P +P
Sbjct: 648 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP 707
Query: 397 ALPTGVPPV------PTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALP------AGPQ 444
P PP+ P Q P PP SP P P +P T P A P
Sbjct: 708 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASP--PMSPSATPPPRVPPLLAAPP 765
Query: 445 PQPQPQPP--LPSQPQAQ 460
Q P PP LP P A+
Sbjct: 766 LQVPPSPPASLPMSPLAK 783
Score = 50.8 bits (120), Expect = 4e-06
Identities = 41/138 (29%), Positives = 54/138 (39%), Gaps = 16/138 (11%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAP-G 393
P P + P + S+ PP P P PP P+ P P VPP ++ P
Sbjct: 708 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQ 767
Query: 394 VLPALPTGVPPVPTQYPITQVQP----------PASTGQSPMGGPFIPAAPVKTALPAGP 443
V P+ P +P P P Q P P+ P PF P+A +LP P
Sbjct: 768 VPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA----SLPMSP 823
Query: 444 QPQPQPQ-PPLPSQPQAQ 460
P PQ PP+ + P Q
Sbjct: 824 LATPPPQAPPVLAAPLLQ 841
Score = 46.6 bits (109), Expect = 7e-05
Identities = 36/135 (26%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVV--PP----PQQPVQPPYGVPSIVPPAV 388
P P PS +++ PP+ P + P + PP P P+ P P PP +
Sbjct: 566 PCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXL 625
Query: 389 SLAPGVLPALPTGVPPVPTQYPITQVQPPASTG------QSPMGGPFIPAAPVKTALPAG 442
+L P P P PP+ P+ P A Q+P P P + PA
Sbjct: 626 ALPPLQAPPSPPASPPLS---PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 682
Query: 443 PQPQPQPQPPLPSQP 457
P P PP + P
Sbjct: 683 PPVSPSATPPSQAPP 697
Score = 46.6 bits (109), Expect = 7e-05
Identities = 44/165 (26%), Positives = 56/165 (33%), Gaps = 27/165 (16%)
Query: 335 PLPGYTQP--SAISSVPPQ-PPYYPSNGYQSGYPVVPPPQQPVQP--------------- 376
PL G P S +++ PPQ PP Q+ P PP P+ P
Sbjct: 602 PLQGLPSPPLSPLATPPPQAPPXLALPPLQA--PPSPPASPPLSPLATPSPQAPNALAVH 659
Query: 377 ----PYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPA 432
P+ P P +P P + P P+Q P + PP SP P P
Sbjct: 660 LLQAPFSPPPSPPVQAPFSPPASPPVSPSATP-PSQAPPSLAAPPLQVPPSPPASP--PM 716
Query: 433 APVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLL 477
+P T P P P P +P P A P R LL
Sbjct: 717 SPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLL 761
Score = 46.2 bits (108), Expect = 9e-05
Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 15/155 (9%)
Query: 324 SRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPY--GVP 381
SR ++ T + P + PSA + P+ P +PS G + PPQ V PP P
Sbjct: 239 SRSLSSSATPLSSPARSGPSARGT--PRAPAHPSQPKPKGLQALRPPQ--VTPPRKDAAP 294
Query: 382 SIVP----PAVSLAPGVLPALPTGVPP---VPTQYPITQVQPPASTGQSPMGGPFIPAAP 434
++ P P + +P A P VPP T P T P P+ P A P
Sbjct: 295 ALGPLSSSPLATPSPSGTKARP--VPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPP 352
Query: 435 VKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELP 469
LP+ P P PP + P Q + +P
Sbjct: 353 SLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIP 387
Score = 45.8 bits (107), Expect = 1e-04
Identities = 68/277 (24%), Positives = 105/277 (37%), Gaps = 36/277 (12%)
Query: 337 PGYTQPSAISSVPPQ--PPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGV 394
P + P + S+ PP PP + Q P PP P+ P P PP ++ P
Sbjct: 679 PPASPPVSPSATPPSQAPPSLAAPPLQ--VPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 736
Query: 395 LPALPTGVPPV-PTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQP---Q 450
+P P PP+ P+ P +V P + P+ P P A + + A P PQ P
Sbjct: 737 VPPSPPASPPMSPSATPPPRVPPLLAA--PPLQVPPSPPASLPMSPLAKPPPQAPPALAT 794
Query: 451 PPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGA------GS 504
PPL + P + F + P + L M+ L T + A S
Sbjct: 795 PPLQALP-SPPASFPGQAPFSPSASL--------PMSPLATPPPQAPPVLAAPLLQVPPS 845
Query: 505 KPASSSGKERERDRQLMPPPAFPVTGIKTESDERNGSGTLTGSHDYPAKKMKTTEKGFGL 564
PAS + + R PP P T + S R G P++ +T G L
Sbjct: 846 PPASPTLQAPRR-----PPTPGPDTSV---SGPRLTLALAPGPPPPPSRSPSSTLSGPDL 897
Query: 565 VAYAADSSDEEEEHGGHKNASSFPQGWSLGYQYPSSQ 601
+++ ++ EE G+ S P+G + P ++
Sbjct: 898 AGHSSSATSTPEELRGY---DSGPEGGAAASPPPDAE 931
Score = 42.4 bits (98), Expect = 0.001
Identities = 62/230 (26%), Positives = 76/230 (33%), Gaps = 56/230 (24%)
Query: 335 PLPGYTQPSAISSVPPQ--PPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAP 392
P P + P + S+ PP PP + Q P PP P+ P P PPA++ P
Sbjct: 739 PSPPASPPMSPSATPPPRVPPLLAAPPLQ--VPPSPPASLPMSPLAKPPPQAPPALATPP 796
Query: 393 GVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGP-----------------FIPAAPV 435
L ALP+ P Q P + P AS SP+ P PA+P
Sbjct: 797 --LQALPSPPASFPGQAPFS---PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPT 851
Query: 436 KTALPAGPQPQPQ-------------PQPPLPSQPQAQKRRFTEELPDERESG------L 476
A P P P P PP P +L S L
Sbjct: 852 LQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEEL 911
Query: 477 LGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERDRQLMPPPAF 526
GY GP G S + E A PA+ S R PP AF
Sbjct: 912 RGYDSGP----EGGAAASPPPDAELAACHPAAWS-------RGPAPPLAF 950
Score = 40.8 bits (94), Expect = 0.004
Identities = 40/143 (27%), Positives = 53/143 (37%), Gaps = 31/143 (21%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIV-------PPAVSLAPGV 394
P +S P P+ + + P+ PP PP PS + PPA++ P
Sbjct: 545 PLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPP-- 602
Query: 395 LPALPTGVPPV------PTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQP--- 445
L LP+ PP+ P Q P PP SP P P +P+ T P P
Sbjct: 603 LQGLPS--PPLSPLATPPPQAPPXLALPPLQAPPSPPASP--PLSPLATPSPQAPNALAV 658
Query: 446 -------QPQPQPPL--PSQPQA 459
P P PP+ P P A
Sbjct: 659 HLLQAPFSPPPSPPVQAPFSPPA 681
Score = 39.7 bits (91), Expect = 0.008
Identities = 33/114 (28%), Positives = 39/114 (34%), Gaps = 4/114 (3%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTG 401
P A S PP + PP P +PS+ PP + A L
Sbjct: 500 PQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLE 559
Query: 402 VPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALP--AGPQPQPQPQPPL 453
PP P P+ PP+ P P A P A P A P Q P PPL
Sbjct: 560 TPPCPAPCPLQ--APPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPL 611
Score = 39.3 bits (90), Expect = 0.011
Identities = 45/170 (26%), Positives = 55/170 (32%), Gaps = 33/170 (19%)
Query: 298 SHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPS 357
S PKP+GL A + V P A+ + P PS
Sbjct: 270 SQPKPKGLQALRP---------------------PQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 358 NGYQSGYPVVPPPQQ--------PVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQY 409
PV PP P PP P + P AP L LP+ P+Q
Sbjct: 309 PSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQA 368
Query: 410 PITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQA 459
P + PP Q+P IP V +L P Q P P S QA
Sbjct: 369 PPSMTTPPM---QAPPSLQTIPPIQVPHSL-TSPSLQAPPSPLALSSLQA 414
Score = 38.1 bits (87), Expect = 0.024
Identities = 55/225 (24%), Positives = 70/225 (31%), Gaps = 59/225 (26%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPPPQQP-------------------VQPPYGVPS 382
PS +S P Q P+ PS PPPQ P +Q P P+
Sbjct: 801 PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT 860
Query: 383 IVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQS----------------PMG 426
P P + AL G PP P++ P + + P G S P G
Sbjct: 861 PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 920
Query: 427 GPFI---PAAPVKTALPA----GPQP---------QPQPQPPL--PSQPQAQKRRFTEEL 468
G P A + PA GP P P P PP P + E
Sbjct: 921 GAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEG 980
Query: 469 PDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKE 513
P+ GP G S GAG+ +S S K+
Sbjct: 981 PESATPAPGALDPGP------SPGTSGGKAAAGAGAGASSRSPKQ 1019
Score = 36.2 bits (82), Expect = 0.091
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 368 PPPQQPVQPPYGVPSIVPPAVSLAPGVLP-ALPTGVPPVPTQYPITQVQPPASTGQSPMG 426
PP P+Q P +P+ P SL+P V P + P + P+ + P Q+P+
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSP-----QAPLS 505
Query: 427 GPFIPAAPVKTALPAGPQPQPQP----QPPLPSQP 457
+P +++L A P Q P PPL + P
Sbjct: 506 SLIMPPLETQSSL-APPSLQTPPASLTTPPLENLP 539
Score = 30.4 bits (67), Expect = 5.0
Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 14/122 (11%)
Query: 343 SAISSVPPQPPY----YPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPAL 398
S+++S PQ P P QS + PP Q PP + + PP +L P L
Sbjct: 493 SSLASHSPQAPLSSLIMPPLETQSS--LAPPSLQT--PPASLTT--PPLENLPSLAPPPL 546
Query: 399 PTGVPPVPTQYPITQVQP---PASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPS 455
T P+ T + T P P SP+ P P P A P P PPL
Sbjct: 547 QTASAPLTTPHLETPPCPAPCPLQAPPSPLTTP-PPETPSSIATPPPQAPPALASPPLQG 605
Query: 456 QP 457
P
Sbjct: 606 LP 607
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 55.1 bits (131), Expect = 2e-07
Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 334 VPLPGYTQPSAISSVP-----PQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAV 388
VP P PS S VP P PP + S VP P + PP VPS++
Sbjct: 224 VPSPPSDVPSLPSDVPSLSGVPSPP----SDVPSLLSGVPSPPSDISPPSDVPSLLSDVP 279
Query: 389 SLAPGVLPALPTGVPPVPTQYP--ITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQ 446
SL P +P+L +GVP P+ P ++ V P S SP P+ + +P+ P
Sbjct: 280 SL-PSDVPSLLSGVPSPPSDVPSLLSDVPSPPSDVPSPPSD-----IPLLSGVPSPPSDV 333
Query: 447 PQPQPPLPSQP 457
P P +PS P
Sbjct: 334 PSPPSDVPSPP 344
Score = 45.4 bits (106), Expect = 2e-04
Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 11/135 (8%)
Query: 327 VNQINTAVPLPGYTQPSAISSVP--PQPPYYPSNGYQSGYPVVPPPQQPV-QPPYGVPSI 383
V+ + + VP P PS +S VP P P + S VP V PP VPS
Sbjct: 107 VSPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPS- 165
Query: 384 VPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPF---IPAAPVKTALP 440
P V P +P+L +GVP P+ P PP+ P P +P+ P L
Sbjct: 166 PPSDVPSPPSDVPSLLSGVPSPPSDVP----SPPSDVPSPPSDVPLLSDVPSPPSDVPLL 221
Query: 441 AGPQPQPQPQPPLPS 455
+ P P LPS
Sbjct: 222 SDVPSPPSDVPSLPS 236
Score = 45.4 bits (106), Expect = 2e-04
Identities = 45/139 (32%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 327 VNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVP-----PPQQPVQPPYGVP 381
V + + VP P PS S VP P PS SG P P PP PP VP
Sbjct: 149 VPSLLSGVPSPPSDVPSPPSDVPSPPSDVPS--LLSGVPSPPSDVPSPPSDVPSPPSDVP 206
Query: 382 --SIVPPAVSLAPGV--LPALPTGVPPVPTQYP-ITQVQPPASTGQSPMGGPFIPAAPVK 436
S VP S P + +P+ P+ VP +P+ P ++ V P S S + G +P+ P
Sbjct: 207 LLSDVPSPPSDVPLLSDVPSPPSDVPSLPSDVPSLSGVPSPPSDVPSLLSG--VPSPPSD 264
Query: 437 TALPAGPQPQPQPQPPLPS 455
+ P+ P LPS
Sbjct: 265 ISPPSDVPSLLSDVPSLPS 283
Score = 40.4 bits (93), Expect = 0.005
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 21/113 (18%)
Query: 345 ISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPP 404
+S VP P PS SG P +P PP VPS++ +P+L +GVP
Sbjct: 111 LSGVPSPPSDVPS--LLSGVPSLPSDVS--SPPSDVPSLLSD--------VPSLLSGVPS 158
Query: 405 VPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
P+ P PP+ P P + + +P+ P P P +PS P
Sbjct: 159 PPSDVP----SPPSDVPSPPSDVP-----SLLSGVPSPPSDVPSPPSDVPSPP 202
Score = 40.0 bits (92), Expect = 0.006
Identities = 43/160 (26%), Positives = 58/160 (36%), Gaps = 39/160 (24%)
Query: 327 VNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQ----SGYPVVPPPQQPVQPPYGVPS 382
V + + VP P PS +S VP P PS SG P PP PP VPS
Sbjct: 285 VPSLLSGVPSPPSDVPSLLSDVPSPPSDVPSPPSDIPLLSGVP--SPPSDVPSPPSDVPS 342
Query: 383 IVP--PAVSLAPGVLPALP--TGVPPVPTQYPITQVQPP--------------------- 417
P +S P L +P +GVP P+ P + P
Sbjct: 343 PPSDVPLLSGVPSPLSDVPLLSGVPSPPSDVPSLLMSPHRLLMSHYSLVSPHRLDVPSLL 402
Query: 418 -------ASTGQSPMGGPFIPA-APVKTALPAGPQPQPQP 449
+ SP G P +P+ P+ + +P+ P P P
Sbjct: 403 SDVPSLLSGVPSSPSGVPSLPSGVPILSGVPSLPSGVPSP 442
Score = 35.0 bits (79), Expect = 0.20
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 352 PPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPI 411
P Y P + + P+V P V P + S + V P +P+L +GVP +P+
Sbjct: 81 PQYSPVSPH---CPLVSPHYSLVSPHRPLVSPLLSGVPSPPSDVPSLLSGVPSLPSDVSS 137
Query: 412 TQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPS 455
P+ P +P+ P + +P+ P P P +PS
Sbjct: 138 PPSDVPSLLSDVPSLLSGVPSPP--SDVPSPPSDVPSPPSDVPS 179
Score = 32.0 bits (71), Expect = 1.7
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 350 PQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPS----IVPPAVSLA----PGVLPALPTG 401
P P++P +P++ P V P Y S +V P SL P V P L +G
Sbjct: 57 PVSPHFPL--VSPHHPLMSPHYSLVSPQYSPVSPHCPLVSPHYSLVSPHRPLVSPLL-SG 113
Query: 402 VPPVPTQYP-----ITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQ 456
VP P+ P + + S+ S + + + +P+ P P P +PS
Sbjct: 114 VPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPSPPSDVPSP 173
Query: 457 P 457
P
Sbjct: 174 P 174
Score = 30.0 bits (66), Expect = 6.5
Identities = 38/131 (29%), Positives = 51/131 (38%), Gaps = 32/131 (24%)
Query: 342 PSAISSVP-----PQPP-------YYPSNGYQSGYPVVPPPQQPVQPPYG-VPSIVPPAV 388
PS +S VP P PP P S Y +V P + V VPS++ V
Sbjct: 354 PSPLSDVPLLSGVPSPPSDVPSLLMSPHRLLMSHYSLVSPHRLDVPSLLSDVPSLLS-GV 412
Query: 389 SLAPGVLPALPTGVP------------PVPTQYPITQVQP------PASTGQSPMGGPFI 430
+P +P+LP+GVP P P+ PIT P P ST P +
Sbjct: 413 PSSPSGVPSLPSGVPILSGVPSLPSGVPSPSGVPITLWCPLTTLWCPLSTLWRPFTALWC 472
Query: 431 PAAPVKTALPA 441
P ++ L A
Sbjct: 473 PLNTLRCPLIA 483
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 54.7 bits (130), Expect = 2e-07
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 334 VPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAV--SLA 391
VP+P +P A PP+ P P VPPP++P PP VP + AV
Sbjct: 10510 VPVPPAKKPEA---PPPKVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAAVPEKKV 10566
Query: 392 PGVLPALPTGVPPVPTQYP---ITQVQPPASTGQSPMGGPF-IPAAPVKTALPAGPQPQP 447
P +P P PP + P + + + PA+ + P P +P AP K +P P P
Sbjct: 10567 PEAIPPKPESPPPEVPEAPKEVVPEKKVPAAPPKKPEVTPVKVPEAP-KEVVPEKKVPVP 10625
Query: 448 QPQPP------LPSQPQ--AQKRRFTEELPDERES 474
P+ P +P P+ +++ E +P + ES
Sbjct: 10626 PPKKPEVPPTKVPEVPKVAVPEKKVPEAIPPKPES 10660
Score = 45.4 bits (106), Expect = 2e-04
Identities = 56/215 (26%), Positives = 78/215 (36%), Gaps = 38/215 (17%)
Query: 334 VPLPGYTQPSAISSVPPQPPYY-------------PSNGYQSGYPVVPPPQQPVQPPYGV 380
V +P P AI P PP P+ + P PP Q V P V
Sbjct: 10643 VAVPEKKVPEAIPPKPESPPPEVFEEPEEVALEEPPAEVVEEPEPAAPP-QVTVPPKKPV 10701
Query: 381 PSIVPPAV-----SLAPGVLPALPTGVPP---VPTQYPITQVQPPASTGQSPMGGPFIPA 432
P PAV L P +P +P V P VP P PPA + P +P
Sbjct: 10702 PEKKAPAVVAKKPELPPVKVPEVPKEVVPEKKVPLVVPKKPEAPPAKVPEVPK--EVVPE 10759
Query: 433 APVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTNLGTG 492
K A+P P+ P P +P +P +++ +P+ ES P +
Sbjct: 10760 K--KVAVPKKPEVPPAKVPEVPKKPVLEEKP-AVPVPERAES-------PPPEVYEEPEE 10809
Query: 493 FSSQNEIEGAGSKPASSSGKERERDRQLMPPPAFP 527
+ + EI KP + E + +PPPA P
Sbjct: 10810 IAPEEEIAPEEEKPVPVA----EEEEPEVPPPAVP 10840
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/175 (21%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 301 KPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGY 360
+PE +A +++ ++ + + E ++++ + T+ + +P + P P
Sbjct: 9904 EPEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFI-----TEEEVVPVIPVKVPEVPRKPV 9958
Query: 361 QSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPAL----PTGVPPVPTQYPITQ--- 413
VP P++ PP VP + P ++P P VP VP + P+ +
Sbjct: 9959 PEEKKPVPVPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKK-PVPEEKV 10017
Query: 414 -VQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEE 467
V P P P +P PV P P+ PP P+ K+ EE
Sbjct: 10018 PVPVPKKVEAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPP-AKVPEVPKKLIPEE 10071
Score = 41.6 bits (96), Expect = 0.002
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Query: 370 PQQPVQPPYGVPSIVPP-------AVSLAPGVLP-ALPTGVPPVPTQY---PITQVQPPA 418
P++P PP VP ++PP V + P P A P VP P + V PP
Sbjct: 10485 PEEPRVPPTKVPEVLPPKEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVPEKKVPVPPPK 10544
Query: 419 STGQSPMGGPFIPAAPVKTALPAGPQPQ---PQPQPPLPSQPQAQKRRFTEE 467
P P +P K A+P P+ P+P+ P P P+A K E+
Sbjct: 10545 KPEVPPTKVPEVP----KAAVPEKKVPEAIPPKPESPPPEVPEAPKEVVPEK 10592
Score = 38.5 bits (88), Expect = 0.018
Identities = 36/149 (24%), Positives = 54/149 (36%), Gaps = 18/149 (12%)
Query: 327 VNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPP---YGVPSI 383
V + AVP P+ + VP +P P VP P++ PP Y P
Sbjct: 10757 VPEKKVAVPKKPEVPPAKVPEVPKKPVLEEK-------PAVPVPERAESPPPEVYEEPEE 10809
Query: 384 VPPAVSLAPGVLPALPTG------VPP--VPTQYPITQVQPPASTGQSPMGGPFIPAAPV 435
+ P +AP +P VPP VP + + + P P P
Sbjct: 10810 IAPEEEIAPEEEKPVPVAEEEEPEVPPPAVPEEPKKIIPEKKVPVIKKPEAPPPKEPEPE 10869
Query: 436 KTALPAGPQPQPQPQPPLPSQPQAQKRRF 464
K +P+P P PP P + +++ F
Sbjct: 10870 KVIEKPKLKPRPPPPPPAPPKEDVKEKIF 10898
Score = 37.4 bits (85), Expect = 0.041
Identities = 37/144 (25%), Positives = 51/144 (35%), Gaps = 20/144 (13%)
Query: 334 VPLPGYTQPSAISSVPPQPP-----YYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAV 388
VP P+ + VP +P P V P++PV P VP VP V
Sbjct: 9967 VPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPV-PEEKVPVPVPKKV 10025
Query: 389 SLAPGVLPALPTGVPP---VPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQP 445
P +P +P P VP P PPA + P K +P +P
Sbjct: 10026 EAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVP-----------KKLIPEEKKP 10074
Query: 446 QPQPQPPLPSQPQAQKRRFTEELP 469
P P+ P+ K+R +P
Sbjct: 10075 TPVPKKVEAPPPKVPKKREPVPVP 10098
Score = 36.2 bits (82), Expect = 0.091
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 370 PQQPVQPPYGVPSIVPPAVSLAPGVLP----ALPTGVPPVPTQYPITQVQ----PPASTG 421
P++ PP VP VP V +LP LP V P + PI++ + PP+
Sbjct: 10202 PKKEEAPPAKVPE-VPKKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEE 10260
Query: 422 QSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDER 472
+ P +P +K A+P P P +P + +A + ++++P+E+
Sbjct: 10261 VEEVAPPRVPEV-IKKAVPEAPTP-------VPKKVEAPPAKVSKKIPEEK 10303
Score = 35.0 bits (79), Expect = 0.20
Identities = 41/167 (24%), Positives = 58/167 (34%), Gaps = 25/167 (14%)
Query: 351 QPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYP 410
+P P + P VP P PP V + P V+ +P PT VP + P
Sbjct: 10961 EPKVEPKKLEKVKKPAVPEPP----PPKPVEEVEVPTVTKRERKIPE-PTKVPEIKPAIP 11015
Query: 411 ITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPD 470
+ +P P A VKT P +P+P P + P K+ + +
Sbjct: 11016 LPAPEPKPK-----------PEAEVKTIKPPPVEPEPTPIAAPVTVPVVGKKAEAKAPKE 11064
Query: 471 ERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERD 517
E GPI G + + IE K SG E+ D
Sbjct: 11065 EAAK-----PKGPIK----GVPKKTPSPIEAERRKLRPGSGGEKPPD 11102
Score = 33.9 bits (76), Expect = 0.45
Identities = 29/122 (23%), Positives = 43/122 (35%), Gaps = 1/122 (0%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTG 401
P + PP+ P P VP ++ PP VP + V+ +
Sbjct: 9334 PKKEPAAPPKVPEVPKKPVPEEKIPVPVAKKKEAPPAKVPEVQKGVVTEEKITIVTQREE 9393
Query: 402 VPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQK 461
PP P I + + P P +P P ALP P P+ + P+P +A
Sbjct: 9394 SPP-PAVPEIPKKKVPEERKPVPRKEEEVPPPPKVPALPKKPVPEEKVAVPVPVAKKAPP 9452
Query: 462 RR 463
R
Sbjct: 9453 PR 9454
Score = 32.7 bits (73), Expect = 1.0
Identities = 55/244 (22%), Positives = 94/244 (38%), Gaps = 35/244 (14%)
Query: 365 PVVPPPQQPVQPPYGVPSIVPPAVSL--------APGVLPALPTGVPPV--PTQYPITQV 414
P PP+ P +P P+ PP+++ +P + P+ V V PT P+ V
Sbjct: 250 PHKTPPRIPPKPKSRSPT--PPSIAAKAQLARQQSPSPIRHSPSPVRHVRAPTPSPVRSV 307
Query: 415 QPPASTGQSPMGGPFIPAAPVKT---ALPAGPQPQP--QPQPPLPSQPQAQKRR-----F 464
P A SP+ P KT + GP+ P + + + S +A+ R
Sbjct: 308 SPAARISTSPIRSVRSPLLMRKTQASTVATGPEVPPPWKQEGYVASSSEAEMRETTLTTS 367
Query: 465 TEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERDRQLMPPP 524
T+ +ER G G Q + ++ +S + ++ ++ KE ++D
Sbjct: 368 TQIRTEERWEGRYGVQE-QVTISGAAGAAASVSASASYAAEAVATGAKEVKQDADKSAAV 426
Query: 525 AFPVTGIK---------TESDERNGSGTLTGSHDYPAKKM--KTTEK-GFGLVAYAADSS 572
A V + + ++ T T H PA++ K EK V AAD +
Sbjct: 427 ATVVAAVDMARVREPVISAVEQTAQRTTTTAVHIQPAQEQVRKEAEKTAVTKVVVAADKA 486
Query: 573 DEEE 576
E+E
Sbjct: 487 KEQE 490
Score = 32.0 bits (71), Expect = 1.7
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 16/76 (21%)
Query: 396 PALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQP---QPP 452
P P V PVP + T+ + P PA +K A+P P P P +PP
Sbjct: 9789 PEKPIPVKPVPEEPVPTKPKAP-------------PAKVLKKAVPEEKVPVPIPKKLKPP 9835
Query: 453 LPSQPQAQKRRFTEEL 468
P P+ K+ F E++
Sbjct: 9836 PPKVPEEPKKVFEEKI 9851
Score = 30.0 bits (66), Expect = 6.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 362 SGYPVVPPPQQPVQPPYGVPSIVPPAVSLAP 392
S V PPQ+P P+ VP V P V AP
Sbjct: 742 SAAKVAEPPQRPASEPHVVPKAVKPRVIQAP 772
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 54.7 bits (130), Expect = 2e-07
Identities = 38/125 (30%), Positives = 49/125 (39%), Gaps = 6/125 (4%)
Query: 337 PGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLP 396
P P+A++ Q P+ P P PP PV P PS PP+++ P +P
Sbjct: 423 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP 482
Query: 397 ALPTGVPPV------PTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQ 450
P PP+ P Q P PP + P P A P ALP+ P P
Sbjct: 483 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA 542
Query: 451 PPLPS 455
P PS
Sbjct: 543 PFSPS 547
Score = 50.4 bits (119), Expect = 5e-06
Identities = 80/299 (26%), Positives = 109/299 (36%), Gaps = 57/299 (19%)
Query: 329 QINTAVPLPGYTQPSAISSVPPQPPYY-PSNGYQSGY-------PVVPPPQQPVQPPYGV 380
Q A+ LP P + + PP P PS + P PPP PVQ P+
Sbjct: 395 QAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP 454
Query: 381 PSIVPPAVSL-----APGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPV 435
P+ P + S AP L A P VPP PPAS SP P P AP
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPP----------SPPASPPMSPSATP-PPQAPP 503
Query: 436 KTALP----AGPQPQPQP---QPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTN 488
A P A P PQ P PPL + P + F + P + L M+
Sbjct: 504 PLAAPPLQLAKPPPQAPPALATPPLQALP-SPPASFPGQAPFSPSASL--------PMSP 554
Query: 489 LGTGFSSQNEIEGA------GSKPASSSGKERERDRQLMPPPAFPVTGIKTESDERNGSG 542
L T + A S PAS + + R PP P T + S R
Sbjct: 555 LATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRR-----PPTPGPDTSV---SGPRLTLA 606
Query: 543 TLTGSHDYPAKKMKTTEKGFGLVAYAADSSDEEEEHGGHKNASSFPQGWSLGYQYPSSQ 601
G P++ +T G L +++ ++ EE G+ S P+G + P ++
Sbjct: 607 LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGY---DSGPEGGAAASPPPDAE 662
Score = 50.1 bits (118), Expect = 6e-06
Identities = 51/189 (26%), Positives = 72/189 (38%), Gaps = 24/189 (12%)
Query: 283 PASGREAFEPMYIYISHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPL--PGYT 340
PA G + P+ + P P A + L T H+ S Q+ T +PL P +
Sbjct: 294 PALGPLSSSPL----ATPSPSA-ALQSQAPPTLPATPHS--SSLTCQLATPLPLAPPSPS 346
Query: 341 QPSAISSVPPQPPYYPSNGYQS-GYPVVPP-----PQQPVQPPYGVPSIVPPAVSLAPGV 394
P ++ ++P P PS S G P + P P+ P P PPA++L P
Sbjct: 347 APPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQ 406
Query: 395 LPALPTGVPPVPTQYPITQVQPPASTG------QSPMGGPFIPAAPVKTALPAGPQPQPQ 448
P P PP+ P+ P A Q+P P P + PA P P
Sbjct: 407 APPSPPASPPLS---PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPS 463
Query: 449 PQPPLPSQP 457
PP + P
Sbjct: 464 ATPPSQAPP 472
Score = 44.7 bits (104), Expect = 3e-04
Identities = 49/175 (28%), Positives = 65/175 (37%), Gaps = 45/175 (25%)
Query: 324 SRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGY-----PVVPPPQQPVQP-- 376
SR ++ T + P + PSA + P+ P +PS G P V PP++ P
Sbjct: 239 SRSLSSSATPLSSPARSGPSARGT--PRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 296
Query: 377 ------PYGVPSIVPPAVSLAPGVLPALPTG-------------VPPVPTQYPITQVQP- 416
P PS S AP LPA P PP P+ P Q P
Sbjct: 297 GPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS 356
Query: 417 ----PASTGQSPMGGP-------FIPAAPVKTALPAGPQPQPQPQ---PPLPSQP 457
P S + +G P F+P+ P+ A P PQ P PPL + P
Sbjct: 357 PPATPPSQATTSLGSPTLQATHSFLPSPPLSPL--ATPPPQAPPALALPPLQAPP 409
Score = 41.2 bits (95), Expect = 0.003
Identities = 38/112 (33%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 343 SAISSVPPQ-PPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTG 401
S +++ PPQ PP Q+ P PP P+ P PS P +LA +L A +
Sbjct: 387 SPLATPPPQAPPALALPPLQA--PPSPPASPPLS-PLATPSPQAPN-ALAVHLLQAPFSP 442
Query: 402 VPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPL 453
P P Q P + PPAS SP P A P A P P P PP+
Sbjct: 443 PPSPPVQAPFS---PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 491
Score = 38.1 bits (87), Expect = 0.024
Identities = 55/225 (24%), Positives = 70/225 (31%), Gaps = 59/225 (26%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPPPQQP-------------------VQPPYGVPS 382
PS +S P Q P+ PS PPPQ P +Q P P+
Sbjct: 532 PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT 591
Query: 383 IVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQS----------------PMG 426
P P + AL G PP P++ P + + P G S P G
Sbjct: 592 PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 651
Query: 427 GPFI---PAAPVKTALPA----GPQP---------QPQPQPPL--PSQPQAQKRRFTEEL 468
G P A + PA GP P P P PP P + E
Sbjct: 652 GAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEG 711
Query: 469 PDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKE 513
P+ GP G S GAG+ +S S K+
Sbjct: 712 PESATPAPGALDPGP------SPGTSGGKAAAGAGAGASSRSPKQ 750
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 54.7 bits (130), Expect = 2e-07
Identities = 38/125 (30%), Positives = 49/125 (39%), Gaps = 6/125 (4%)
Query: 337 PGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLP 396
P P+A++ Q P+ P P PP PV P PS PP+++ P +P
Sbjct: 384 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP 443
Query: 397 ALPTGVPPV------PTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQ 450
P PP+ P Q P PP + P P A P ALP+ P P
Sbjct: 444 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA 503
Query: 451 PPLPS 455
P PS
Sbjct: 504 PFSPS 508
Score = 50.4 bits (119), Expect = 5e-06
Identities = 80/299 (26%), Positives = 109/299 (36%), Gaps = 57/299 (19%)
Query: 329 QINTAVPLPGYTQPSAISSVPPQPPYY-PSNGYQSGY-------PVVPPPQQPVQPPYGV 380
Q A+ LP P + + PP P PS + P PPP PVQ P+
Sbjct: 356 QAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP 415
Query: 381 PSIVPPAVSL-----APGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPV 435
P+ P + S AP L A P VPP PPAS SP P P AP
Sbjct: 416 PASPPVSPSATPPSQAPPSLAAPPLQVPP----------SPPASPPMSPSATP-PPQAPP 464
Query: 436 KTALP----AGPQPQPQP---QPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTN 488
A P A P PQ P PPL + P + F + P + L M+
Sbjct: 465 PLAAPPLQLAKPPPQAPPALATPPLQALP-SPPASFPGQAPFSPSASL--------PMSP 515
Query: 489 LGTGFSSQNEIEGA------GSKPASSSGKERERDRQLMPPPAFPVTGIKTESDERNGSG 542
L T + A S PAS + + R PP P T + S R
Sbjct: 516 LATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRR-----PPTPGPDTSV---SGPRLTLA 567
Query: 543 TLTGSHDYPAKKMKTTEKGFGLVAYAADSSDEEEEHGGHKNASSFPQGWSLGYQYPSSQ 601
G P++ +T G L +++ ++ EE G+ S P+G + P ++
Sbjct: 568 LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGY---DSGPEGGAAASPPPDAE 623
Score = 47.8 bits (112), Expect = 3e-05
Identities = 46/176 (26%), Positives = 65/176 (36%), Gaps = 19/176 (10%)
Query: 298 SHPKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGY----TQPSAISSVPPQPP 353
S PKP+GL A + + A ++ A P P + P ++ ++P P
Sbjct: 261 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPA 320
Query: 354 YYPSNGYQS-GYPVVPP-----PQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPT 407
PS S G P + P P+ P P PPA++L P P P PP+
Sbjct: 321 TPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLS- 379
Query: 408 QYPITQVQPPASTG------QSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQP 457
P+ P A Q+P P P + PA P P PP + P
Sbjct: 380 --PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPP 433
Score = 44.7 bits (104), Expect = 3e-04
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 27/151 (17%)
Query: 324 SRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPY--GVP 381
SR ++ T + P + PSA + P+ P +PS G + PPQ V PP P
Sbjct: 230 SRSLSSSATPLSSPARSGPSARGT--PRAPAHPSQPKPKGLQALRPPQ--VTPPRKDAAP 285
Query: 382 SIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQP-----PASTGQSPMGGP-------F 429
++ P +S +P P+ PP P+ P Q P P S + +G P F
Sbjct: 286 ALGP--LSSSPLATPS--PSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSF 341
Query: 430 IPAAPVKTALPAGPQPQPQPQ---PPLPSQP 457
+P+ P+ A P PQ P PPL + P
Sbjct: 342 LPSPPLSPL--ATPPPQAPPALALPPLQAPP 370
Score = 41.2 bits (95), Expect = 0.003
Identities = 38/112 (33%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 343 SAISSVPPQ-PPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTG 401
S +++ PPQ PP Q+ P PP P+ P PS P +LA +L A +
Sbjct: 348 SPLATPPPQAPPALALPPLQA--PPSPPASPPLS-PLATPSPQAPN-ALAVHLLQAPFSP 403
Query: 402 VPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPL 453
P P Q P + PPAS SP P A P A P P P PP+
Sbjct: 404 PPSPPVQAPFS---PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 452
Score = 38.1 bits (87), Expect = 0.024
Identities = 55/225 (24%), Positives = 70/225 (31%), Gaps = 59/225 (26%)
Query: 342 PSAISSVPPQPPYYPSNGYQSGYPVVPPPQQP-------------------VQPPYGVPS 382
PS +S P Q P+ PS PPPQ P +Q P P+
Sbjct: 493 PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT 552
Query: 383 IVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQS----------------PMG 426
P P + AL G PP P++ P + + P G S P G
Sbjct: 553 PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 612
Query: 427 GPFI---PAAPVKTALPA----GPQP---------QPQPQPPL--PSQPQAQKRRFTEEL 468
G P A + PA GP P P P PP P + E
Sbjct: 613 GAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEG 672
Query: 469 PDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKE 513
P+ GP G S GAG+ +S S K+
Sbjct: 673 PESATPAPGALDPGP------SPGTSGGKAAAGAGAGASSRSPKQ 711
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 54.7 bits (130), Expect = 2e-07
Identities = 50/167 (29%), Positives = 64/167 (38%), Gaps = 35/167 (20%)
Query: 327 VNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQP--VQPPYGVPSIV 384
V ++ V P +Q A + PP+PP Q PVV QP PPY +P
Sbjct: 150 VEKLQEVVRKPRASQELAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSP 209
Query: 385 PPAVSLAPGVLPALPTGVPPVPTQ-----------YPITQVQPPASTGQS---------- 423
P++ + P ALP PV +Q YP Q+ P + G S
Sbjct: 210 SPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPR 269
Query: 424 ------PMG--GPFIPAAPVKTALPAGPQPQPQP----QPPLPSQPQ 458
PMG GP P + P PQ P P +PP P QPQ
Sbjct: 270 PGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGKPPYPIQPQ 316
Score = 43.1 bits (100), Expect = 7e-04
Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 15/72 (20%)
Query: 335 PLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGV 394
P PGY Q S + +PPY P +P P P P+QPPY PP
Sbjct: 292 PSPGYPQQSPYPATGGKPPY-PIQPQLPSFPGQPQPSVPLQPPY------PPG------- 337
Query: 395 LPALPTGVPPVP 406
PA P G PP P
Sbjct: 338 -PAPPYGFPPPP 348
Score = 38.5 bits (88), Expect = 0.018
Identities = 38/112 (33%), Positives = 42/112 (37%), Gaps = 29/112 (25%)
Query: 347 SVPPQPPY--YPSNGYQSGYPV----VPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPT 400
S+PP+P Y P GYP+ P P P Q PY PA
Sbjct: 265 SMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPY-------PATG----------- 306
Query: 401 GVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPP 452
G PP YPI Q Q P+ GQ P P P A P G P P P P
Sbjct: 307 GKPP----YPI-QPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGPAWP 353
Score = 32.3 bits (72), Expect = 1.3
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 337 PGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPY 378
PG QPS VP QPPY P G+ PPP P P Y
Sbjct: 321 PGQPQPS----VPLQPPYPPGPAPPYGF---PPPPGPAWPGY 355
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 54.3 bits (129), Expect = 3e-07
Identities = 54/203 (26%), Positives = 75/203 (36%), Gaps = 35/203 (17%)
Query: 300 PKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSV----------- 348
P P +++A L EN Q+ R ++ P P PSA+S+
Sbjct: 292 PIPTCISSATGLIENRPQSPAT--GRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPP 349
Query: 349 PPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGV-----PSIVPPAVSLAPGVLPALPT--- 400
PP PP P P VPPP P+Q GV P I PP V +P V A P
Sbjct: 350 PPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCET 409
Query: 401 ------------GVPPVPTQYPITQ--VQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQ 446
G+PP P P+ ++P + + + P P + P P
Sbjct: 410 VPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPL 469
Query: 447 PQPQPPLPSQPQAQKRRFTEELP 469
P PP P ++ +R LP
Sbjct: 470 MPPSPPSQVIPASEPKRHPSTLP 492
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 54.3 bits (129), Expect = 3e-07
Identities = 54/203 (26%), Positives = 75/203 (36%), Gaps = 35/203 (17%)
Query: 300 PKPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSV----------- 348
P P +++A L EN Q+ R ++ P P PSA+S+
Sbjct: 292 PIPTCISSATGLIENRPQSPAT--GRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPP 349
Query: 349 PPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGV-----PSIVPPAVSLAPGVLPALPT--- 400
PP PP P P VPPP P+Q GV P I PP V +P V A P
Sbjct: 350 PPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCET 409
Query: 401 ------------GVPPVPTQYPITQ--VQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQ 446
G+PP P P+ ++P + + + P P + P P
Sbjct: 410 VPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPL 469
Query: 447 PQPQPPLPSQPQAQKRRFTEELP 469
P PP P ++ +R LP
Sbjct: 470 MPPSPPSQVIPASEPKRHPSTLP 492
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.131 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,350,401
Number of Sequences: 37866
Number of extensions: 2051507
Number of successful extensions: 22039
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 1281
Number of HSP's that attempted gapping in prelim test: 10739
Number of HSP's gapped (non-prelim): 7386
length of query: 614
length of database: 18,247,518
effective HSP length: 108
effective length of query: 506
effective length of database: 14,157,990
effective search space: 7163942940
effective search space used: 7163942940
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.