APOBEC3F 32768

Name: APOBEC3F	Sequence: fasta or formatted (101aa)		NCBI GI: 54873619
Description: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F isoform b		Referenced in: Additional Host Defense Functions RNA Editing and Other RNA Modifications
Other entries for this name: alt prot [373aa] apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like ...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 5 1 C cysteine 2.0 2 1 D aspartate 2.0 2 1 E glutamate 3.0 3 1 F phenylalanine 6.9 7 1 G glycine 5.9 6 1 H histidine 2.0 2 1 I isoleucine 3.0 3 1 K lysine 4.0 4 1 L leucine 5.0 5 1 M methionine 2.0 2 1 N asparagine 4.0 4 1 P proline 11.9 12 2 Q glutamine 6.9 7 1 R arginine 12.9 13 2 S serine 5.9 6 2 T threonine 5.9 6 1 V valine 5.9 6 1 W tryptophan 2.0 2 1 Y tyrosine 4.0 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3F 0.526 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3G 0.510 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3B 0.227 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC3D 0.206 apolipoprotein B mRNA editing enzyme, catalytic pol... APOBEC3C 0.072 apolipoprotein B mRNA editing enzyme, catalytic poly... APOBEC2 0.021 apolipoprotein B mRNA editing enzyme, catalytic polyp... PPPDE2 0.021 PPPDE peptidase domain containing 2 F2RL2 0.015 coagulation factor II (thrombin) receptor-like 2 prec... CUGBP1 0.010 CUG triplet repeat, RNA-binding protein 1 isoform 3 ... CUGBP1 0.010 CUG triplet repeat, RNA-binding protein 1 isoform 1 [... CUGBP1 0.010 CUG triplet repeat, RNA-binding protein 1 isoform 2 ... NHS 0.010 Nance-Horan syndrome protein isoform 1 SLC22A16 0.010 solute carrier family 22, member 16 NR5A2 0.005 nuclear receptor subfamily 5, group A, member 2 isof... NR5A2 0.005 nuclear receptor subfamily 5, group A, member 2 isofo... VGF 0.005 VGF nerve growth factor inducible precursor TTC18 0.005 tetratricopeptide repeat domain 18 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.