TTC18 15716

Name: TTC18	Sequence: fasta or formatted (1121aa)		NCBI GI: 229577238
Description: tetratricopeptide repeat domain 18		Referenced in: Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 83 3 C cysteine 1.7 19 1 D aspartate 3.8 43 2 E glutamate 9.3 104 4 F phenylalanine 3.7 41 2 G glycine 5.8 65 2 H histidine 2.4 27 2 I isoleucine 5.0 56 2 K lysine 7.3 82 2 L leucine 11.0 123 3 M methionine 1.8 20 1 N asparagine 3.6 40 2 P proline 5.5 62 2 Q glutamine 5.4 61 2 R arginine 3.3 37 2 S serine 6.4 72 2 T threonine 5.4 60 3 V valine 6.5 73 2 W tryptophan 0.9 10 1 Y tyrosine 3.8 43 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tetratricopeptide repeat domain 18 PDCD11 0.011 programmed cell death 11 IFT88 0.010 intraflagellar transport 88 homolog isoform 1 IFT88 0.010 intraflagellar transport 88 homolog isoform 2 TTC27 0.009 tetratricopeptide repeat domain 27 CTR9 0.009 SH2 domain binding protein 1 CDC27 0.007 cell division cycle protein 27 isoform 1 CDC27 0.007 cell division cycle protein 27 isoform 2 TTC13 0.007 tetratricopeptide repeat domain 13 isoform b TTC13 0.007 tetratricopeptide repeat domain 13 isoform a CDC23 0.007 cell division cycle protein 23 RPAP3 0.006 RNA polymerase II associated protein 3 isoform 3 [H... RPAP3 0.006 RNA polymerase II associated protein 3 isoform 1 [H... TMTC1 0.006 transmembrane and tetratricopeptide repeat containin... SGTA 0.006 small glutamine-rich tetratricopeptide CDC16 0.005 anaphase-promoting complex, subunit 6 CDC16 0.005 anaphase-promoting complex, subunit 6 RPAP3 0.005 RNA polymerase II associated protein 3 isoform 2 [H... TTC6 0.005 PREDICTED: tetratricopeptide repeat domain 6 TTC6 0.005 PREDICTED: tetratricopeptide repeat domain 6 C14orf25 0.005 PREDICTED: chromosome 14 open reading frame 25 [Hom... STIP1 0.005 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... TTC37 0.005 tetratricopeptide repeat domain 37 LIG1 0.005 DNA ligase I PEX5 0.005 peroxisomal biogenesis factor 5 isoform d PEX5 0.005 peroxisomal biogenesis factor 5 isoform d PEX5 0.005 peroxisomal biogenesis factor 5 isoform c PEX5 0.005 peroxisomal biogenesis factor 5 isoform a PEX5 0.005 peroxisomal biogenesis factor 5 isoform b TTC7A 0.005 tetratricopeptide repeat domain 7A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.