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Search of human proteins with 54607116
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|54607116 leiomodin 3 (fetal) [Homo sapiens]
(560 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|54607116 leiomodin 3 (fetal) [Homo sapiens] 1121 0.0
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens] 336 3e-92
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens] 278 7e-75
gi|7657647 neuronal tropomodulin isoform a [Homo sapiens] 198 1e-50
gi|156415984 tropomodulin 4 (muscle) [Homo sapiens] 182 9e-46
gi|4507553 tropomodulin 1 [Homo sapiens] 160 4e-39
gi|7657649 tropomodulin 3 (ubiquitous) [Homo sapiens] 159 5e-39
gi|218931148 neuronal tropomodulin isoform b [Homo sapiens] 152 6e-37
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 65 1e-10
gi|17975763 myelin transcription factor 1 [Homo sapiens] 61 2e-09
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 59 2e-08
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 58 3e-08
gi|115529449 upstream binding transcription factor, RNA polymera... 56 1e-07
gi|115529451 upstream binding transcription factor, RNA polymera... 56 1e-07
gi|7657671 upstream binding transcription factor, RNA polymerase... 56 1e-07
gi|221219020 NYD-SP11 protein [Homo sapiens] 54 3e-07
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 54 3e-07
gi|22758136 MAP7 domain containing 2 [Homo sapiens] 54 4e-07
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 54 5e-07
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 54 5e-07
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 53 6e-07
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 53 6e-07
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 53 8e-07
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 53 8e-07
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 52 1e-06
gi|55956788 nucleolin [Homo sapiens] 52 1e-06
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... 52 1e-06
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ... 52 1e-06
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 52 1e-06
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 52 2e-06
>gi|54607116 leiomodin 3 (fetal) [Homo sapiens]
Length = 560
Score = 1121 bits (2900), Expect = 0.0
Identities = 560/560 (100%), Positives = 560/560 (100%)
Query: 1 MSEHSRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDK 60
MSEHSRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDK
Sbjct: 1 MSEHSRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDK 60
Query: 61 PPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK 120
PPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK
Sbjct: 61 PPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK 120
Query: 121 EKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQ 180
EKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQ
Sbjct: 121 EKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQ 180
Query: 181 IRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTD 240
IRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTD
Sbjct: 181 IRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTD 240
Query: 241 LDGSLRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAF 300
LDGSLRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAF
Sbjct: 241 LDGSLRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAF 300
Query: 301 ALANMLRENRSITTLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHAEMEI 360
ALANMLRENRSITTLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHAEMEI
Sbjct: 301 ALANMLRENRSITTLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHAEMEI 360
Query: 361 ARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQRQKRQEEQKQQQLKEQKKLIAML 420
ARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQRQKRQEEQKQQQLKEQKKLIAML
Sbjct: 361 ARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQRQKRQEEQKQQQLKEQKKLIAML 420
Query: 421 ENGLGLPPGMWELLGGPKPDSRMQEFFQPPPPRPPNPQNVPFSQRSEMMKKPSQAPKYRT 480
ENGLGLPPGMWELLGGPKPDSRMQEFFQPPPPRPPNPQNVPFSQRSEMMKKPSQAPKYRT
Sbjct: 421 ENGLGLPPGMWELLGGPKPDSRMQEFFQPPPPRPPNPQNVPFSQRSEMMKKPSQAPKYRT 480
Query: 481 DPDSFRVVKLKRIQRKSRMPEAREPPEKTNLKDVIKTLKPVPRNRPPPLVEITPRDQLLN 540
DPDSFRVVKLKRIQRKSRMPEAREPPEKTNLKDVIKTLKPVPRNRPPPLVEITPRDQLLN
Sbjct: 481 DPDSFRVVKLKRIQRKSRMPEAREPPEKTNLKDVIKTLKPVPRNRPPPLVEITPRDQLLN 540
Query: 541 DIRHSSVAYLKPVQLPKELA 560
DIRHSSVAYLKPVQLPKELA
Sbjct: 541 DIRHSSVAYLKPVQLPKELA 560
>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
Length = 547
Score = 336 bits (862), Expect = 3e-92
Identities = 218/583 (37%), Positives = 314/583 (53%), Gaps = 89/583 (15%)
Query: 16 EEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGNFNHKSLVDYM 75
E I+EDE+LA+LSAEELKEL+ E+E + PD +LPVG+ QK T+K PTG F+ ++L+
Sbjct: 14 ESIDEDELLASLSAEELKELERELEDIEPDRNLPVGLRQKSLTEKTPTGTFSREALM--A 71
Query: 76 YWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESK 135
YWEK S+++LE+ER+ +E+K EE EE E++ + S+
Sbjct: 72 YWEKESQKLLEKERLGECGKVAEDK--EESEE------------------ELIFTESNSE 111
Query: 136 GSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKA 195
S + +EE+E +E+++++D E+ E + ET + G N +N+ K
Sbjct: 112 VSEEVYTEEEEEESQEEEEEEDSDEE--ERTIETAKGINGTVNYDSVNSDNS----KPKI 165
Query: 196 FKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKNDPDM 255
FK Q + S + ++ + P GN T ++ +L +++ NDPD
Sbjct: 166 FKSQIENINLTNGSNGRNTESP------------AAIHPCGNPTVIEDALDKIKSNDPDT 213
Query: 256 KELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAFALANMLRENRSITTL 315
E+NLNNIENI + L F A+K N +KTFSLAN AD++ A A+A ML+ N IT +
Sbjct: 214 TEVNLNNIENITTQTLTRFAEALKDNTVVKTFSLANTHADDSAAMAIAEMLKVNEHITNV 273
Query: 316 NIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHAEMEIARLLKANNTLLKMGY 375
N+ESNFITGKGI+AIMR LQ N LTELRFHNQRH++G EMEI +LLK N TLL++GY
Sbjct: 274 NVESNFITGKGILAIMRALQHNTVLTELRFHNQRHIMGSQVEMEIVKLLKENTTLLRLGY 333
Query: 376 HFELPGPRMVVTNLLTRNQDKQRQKRQEEQKQQQLKEQKKLIAMLENGLGLPPGMWEL-- 433
HFELPGPRM +T++LTRN DKQRQKR +EQKQQ+ + G L +W+
Sbjct: 334 HFELPGPRMSMTSILTRNMDKQRQKRLQEQKQQE---------GYDGGPNLRTKVWQRGT 384
Query: 434 -------------LGGPKPDSRMQ--------EFFQPPPPRPPNPQNVPFSQRSEMMKKP 472
PK ++Q PPPP PP P P SQR P
Sbjct: 385 PSSSPYVSPRHSPWSSPKLPKKVQTVRSRPLSPVATPPPPPPPPPPPPPSSQRLPPPPPP 444
Query: 473 SQAP---KYRTDPDSFRVVK--------LKRIQRKSRMPEAREPPEKTNLKDVIKTLKPV 521
P K + V+K L+ Q+K + + ++ P LK++ +L+ V
Sbjct: 445 PPPPLPEKKLITRNIAEVIKQQESAQRALQNGQKKKKGKKVKKQPNSI-LKEIKNSLRSV 503
Query: 522 PRNR-----PPPLVEITPRDQLLNDIRHSSVAYLKPVQLPKEL 559
+ P + + + L+ IR SS+ LK V++P+ L
Sbjct: 504 QEKKMEDSSRPSTPQRSAHENLMEAIRGSSIKQLKRVEVPEAL 546
>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
Length = 600
Score = 278 bits (712), Expect = 7e-75
Identities = 214/643 (33%), Positives = 319/643 (49%), Gaps = 133/643 (20%)
Query: 5 SRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTG 64
SR + + E+ + D +L LS EE++EL+ E++V+ PD S+PVG+ Q++QT+K TG
Sbjct: 2 SRVAKYRRQVSEDPDIDSLLETLSPEEMEELEKELDVVDPDGSVPVGLRQRNQTEKQSTG 61
Query: 65 NFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRN------------ 112
+N ++++++ EK ++++++ E + E KT ++ E R+
Sbjct: 62 VYNREAMLNFC--EKETKKLMQREMSMDESKQVETKTDAKNGEERGRDASKKALGPRRDS 119
Query: 113 ------------------------KNMAQYLKEKLNNEI-------VANKRES----KGS 137
K+ + +EK+ I +K+E+ +G
Sbjct: 120 DLGKEPKRGGLKKSFSRDRDEAGGKSGEKPKEEKIIRGIDKGRVRAAVDKKEAGKDGRGE 179
Query: 138 SNIQETDEEDEEEEDDDDDDEGEDDGEESEE----TNREEEGKAKEQIRNCE-------- 185
T +E+E++ D + D ++ EE +E++ K K + RN +
Sbjct: 180 ERAVATKKEEEKKGSDRNTGLSRDKDKKREEMKEVAKKEDDEKVKGERRNTDTRKEGEKM 239
Query: 186 -----NNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDP--KKLALDTSFLKVSTR--PSG 236
N + D+ K + ++ EK + K +P +K A D S K + PSG
Sbjct: 240 KRAGGNTDMKKEDEKVKRGTGNTDTKKDDEK-VKKNEPLHEKEAKDDSKTKTPEKQTPSG 298
Query: 237 NQTDLDGS---------------LRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKN 281
+G L RV+ NDP+M E+N+NN + I E+L+ F A++ N
Sbjct: 299 PTKPSEGPAKVEEEAAPSIFDEPLERVKNNDPEMTEVNVNNSDCITNEILVRFTEALEFN 358
Query: 282 KHIKTFSLANVGADENVAFALANMLRENRSITTLNIESNFITGKGIVAIMRCLQFNETLT 341
+K F+LAN AD++VAFA+A ML+ N++IT+LN++SN ITGKGI+AI R L N TLT
Sbjct: 359 TVVKLFALANTRADDHVAFAIAIMLKANKTITSLNLDSNHITGKGILAIFRALLQNNTLT 418
Query: 342 ELRFHNQRHMLGHHAEMEIARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQRQKR 401
ELRFHNQRH+ G EMEIA+LLK N TLLK+GYHFEL GPRM VTNLL+RN DKQRQKR
Sbjct: 419 ELRFHNQRHICGGKTEMEIAKLLKENTTLLKLGYHFELAGPRMTVTNLLSRNMDKQRQKR 478
Query: 402 QEEQKQ-QQLKEQKKLIAMLENGLGLPPGMWELLGGPKPDSRMQEFFQPPPPRPPNPQNV 460
+EQ+Q Q+ K +KK + L +P G PKP P P P+P+N
Sbjct: 479 LQEQRQAQEAKGEKKDL------LEVPKAGAVAKGSPKP--------SPQPSPKPSPKNS 524
Query: 461 PFSQRSEMMKKPSQAPKYRTDPDSFRVVKLKRIQRKSRMPEAREPPEKTNLKDVIKTLKP 520
P K AP P P P NLK+ +L P
Sbjct: 525 P---------KKGGAPAAPPPPP----------------PPLAPPLIMENLKN---SLSP 556
Query: 521 VPR----NRPPPLVEITPRDQLLNDIRHSSVAYLKPVQLPKEL 559
+ ++ P E RDQLL IR S++ LK V++PK L
Sbjct: 557 ATQRKMGDKVLPAQEKNSRDQLLAAIRSSNLKQLKKVEVPKLL 599
>gi|7657647 neuronal tropomodulin isoform a [Homo sapiens]
Length = 351
Score = 198 bits (504), Expect = 1e-50
Identities = 135/393 (34%), Positives = 206/393 (52%), Gaps = 55/393 (13%)
Query: 16 EEINEDEILANLSAEELKELQSEMEVMAPDPS-LPVGMIQKDQTDKPPTGNFNHKSLVDY 74
+ I+EDE+L LS EELK+L++ ++ + P+ + LP G QKDQT K TG F+ + L+ Y
Sbjct: 13 KNIDEDELLGKLSEEELKQLENVLDDLDPESAMLPAGFRQKDQTQKAATGPFDREHLLMY 72
Query: 75 MYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRES 134
LE+E + E+K +E+ K KEK + ++E
Sbjct: 73 ----------LEKEAL-------EQKDREDFVPFTGEKKGRVFIPKEKP----IETRKEE 111
Query: 135 KGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDK 194
K + D E EE D E D A + N NN
Sbjct: 112 KVT-----LDPELEEALASASDTELYDLA-------------AVLGVHNLLNN------- 146
Query: 195 AFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKNDPD 254
P+ E++ P + + +K N T+++ SL++++ NDP
Sbjct: 147 --------PKFDEETANNKGGKGPVRNVVKGEKVKPVFEEPPNPTNVEISLQQMKANDPS 198
Query: 255 MKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAFALANMLRENRSITT 314
++E+NLNNI+NIP L +F A++ N H+K FSLA +++ VA A A+ML+ N+++T+
Sbjct: 199 LQEVNLNNIKNIPIPTLREFAKALETNTHVKKFSLAATRSNDPVAIAFADMLKVNKTLTS 258
Query: 315 LNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHAEMEIARLLKANNTLLKMG 374
LNIESNFITG GI+A++ L+ N+TLTE++ NQR LG EMEIA++L+ N+ +LK G
Sbjct: 259 LNIESNFITGTGILALVEALKENDTLTEIKIDNQRQQLGTAVEMEIAQMLEENSRILKFG 318
Query: 375 YHFELPGPRMVVTNLLTRNQDKQRQKRQEEQKQ 407
Y F GPR V +T+N D R+KR E ++
Sbjct: 319 YQFTKQGPRTRVAAAITKNNDLVRKKRVEADRR 351
>gi|156415984 tropomodulin 4 (muscle) [Homo sapiens]
Length = 345
Score = 182 bits (461), Expect = 9e-46
Identities = 127/402 (31%), Positives = 197/402 (49%), Gaps = 65/402 (16%)
Query: 7 NSDQEELLD-EEINEDEILANLSAEELKELQSEMEVMAPDPSL-PVGMIQKDQTDKPPTG 64
+S Q+EL +I+EDEIL LS EEL++L E++ M P+ L P G+ Q+DQT K PTG
Sbjct: 2 SSYQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPTG 61
Query: 65 NFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLN 124
+ ++L+ Y LE++ + V K ++ + EK
Sbjct: 62 PLDREALLQY----------LEQQALEV-----------------KERDDLVPFTGEKKG 94
Query: 125 NEIVANKRESKGSSNIQETDEEDEEEEDDDD----DDEGEDDGEESEETNREEEGKAKEQ 180
+ KRE I E +E D D D + + +
Sbjct: 95 KPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSNKQYYDALCSGE 154
Query: 181 IRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTD 240
I N E V +K D P N T+
Sbjct: 155 ICNTEGISSVVQPDKYKPVPDEPP--------------------------------NPTN 182
Query: 241 LDGSLRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAF 300
++ L+RVR ND +++E+NLNNI++IP ML + AMK N ++++FSL + + +A
Sbjct: 183 IEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIAN 242
Query: 301 ALANMLRENRSITTLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHAEMEI 360
A+A+MLRENRS+ +LNIESNFI+ G++A+++ ++ N TLTELR NQR G EME+
Sbjct: 243 AVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEMEM 302
Query: 361 ARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQRQKRQ 402
A +L+ ++++ GYHF GPR +TRN + +RQ+++
Sbjct: 303 ATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQKK 344
>gi|4507553 tropomodulin 1 [Homo sapiens]
Length = 359
Score = 160 bits (404), Expect = 4e-39
Identities = 74/165 (44%), Positives = 112/165 (67%)
Query: 237 NQTDLDGSLRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADE 296
N TD++ +L R++ NDP ++E+NLNNI NIP L + A+K+N ++K FS+ +++
Sbjct: 179 NSTDVEETLERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSND 238
Query: 297 NVAFALANMLRENRSITTLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHA 356
VA+ALA ML+EN+ + TLN+ESNFI+G GI+ ++ L +N +L E++ NQ LG+
Sbjct: 239 PVAYALAEMLKENKVLKTLNVESNFISGAGILRLVEALPYNTSLVEMKIDNQSQPLGNKV 298
Query: 357 EMEIARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQRQKR 401
EMEI +L+ N TLLK GYHF GPR+ +N + N D R++R
Sbjct: 299 EMEIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKRR 343
>gi|7657649 tropomodulin 3 (ubiquitous) [Homo sapiens]
Length = 352
Score = 159 bits (403), Expect = 5e-39
Identities = 79/171 (46%), Positives = 115/171 (67%)
Query: 237 NQTDLDGSLRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADE 296
N T+++ SL+R ++ND + E+NLNNI+NIP L DF A++ N H+K FSLA +++
Sbjct: 182 NPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSND 241
Query: 297 NVAFALANMLRENRSITTLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHA 356
VA A A ML+ N+++ +LN+ESNFITG GI+A++ L+ NETL EL+ NQR LG
Sbjct: 242 PVATAFAEMLKVNKTLKSLNVESNFITGVGILALIDALRDNETLAELKIDNQRQQLGTAV 301
Query: 357 EMEIARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQRQKRQEEQKQ 407
E+E+A++L+ N +LK GY F GPR N +T+N D R++R E Q
Sbjct: 302 ELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLVRKRRVEGDHQ 352
>gi|218931148 neuronal tropomodulin isoform b [Homo sapiens]
Length = 315
Score = 152 bits (385), Expect = 6e-37
Identities = 120/393 (30%), Positives = 184/393 (46%), Gaps = 91/393 (23%)
Query: 16 EEINEDEILANLSAEELKELQSEMEVMAPDPS-LPVGMIQKDQTDKPPTGNFNHKSLVDY 74
+ I+EDE+L LS EELK+L++ ++ + P+ + LP G QKDQT K TG F+ + L+ Y
Sbjct: 13 KNIDEDELLGKLSEEELKQLENVLDDLDPESAMLPAGFRQKDQTQKAATGPFDREHLLMY 72
Query: 75 MYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRES 134
LE+E + E+K +E+ K KEK + ++E
Sbjct: 73 ----------LEKEAL-------EQKDREDFVPFTGEKKGRVFIPKEKP----IETRKEE 111
Query: 135 KGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDK 194
K + D E EE D E D A + N NN
Sbjct: 112 KVT-----LDPELEEALASASDTELYDLA-------------AVLGVHNLLNN------- 146
Query: 195 AFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKNDPD 254
P+ E++ P + + +K N T+++ SL++++ NDP
Sbjct: 147 --------PKFDEETANNKGGKGPVRNVVKGEKVKPVFEEPPNPTNVEISLQQMKANDPS 198
Query: 255 MKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAFALANMLRENRSITT 314
++E+NLNNI+ A A+ML+ N+++T+
Sbjct: 199 LQEVNLNNIK------------------------------------AFADMLKVNKTLTS 222
Query: 315 LNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHAEMEIARLLKANNTLLKMG 374
LNIESNFITG GI+A++ L+ N+TLTE++ NQR LG EMEIA++L+ N+ +LK G
Sbjct: 223 LNIESNFITGTGILALVEALKENDTLTEIKIDNQRQQLGTAVEMEIAQMLEENSRILKFG 282
Query: 375 YHFELPGPRMVVTNLLTRNQDKQRQKRQEEQKQ 407
Y F GPR V +T+N D R+KR E ++
Sbjct: 283 YQFTKQGPRTRVAAAITKNNDLVRKKRVEADRR 315
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 65.5 bits (158), Expect = 1e-10
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 33/288 (11%)
Query: 107 EIEKRNKNMAQYLKEKLNNEIVANKRE--SKGSSN------------IQETDEEDEE-EE 151
E+++R +Q KE++N+E + E S GSS+ ++E EEDEE EE
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 152 DDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
D ++D+E ++DGEE EE EEE + +E+ E +++RD+ E +
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYE-----------QDERDQKEEGNDYDT 266
Query: 212 KISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKNDPDMKELNLNNIENIPKEML 271
+ D ++ SF S R SG+ TD ++ RK + + + + E
Sbjct: 267 RSEASDSGSESV--SFTDGSVR-SGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESY 323
Query: 272 LDFVNAMKKNKHIKTFSLANVGADENVAFALANMLRENRSITTLNIESNFITGKGIVAIM 331
D + +K F L ENV+ A A + + + F + + ++ I
Sbjct: 324 ADQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIF 383
Query: 332 RCLQFNETLTELRFHNQRHMLGHHAEMEIARLLKANNTLLKMGYHFEL 379
+ + R ++ HH I +L A + +G F++
Sbjct: 384 SVRESGKFQGFARLSSE----SHHGGSPIHWVLPAGMSAKMLGGVFKI 427
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 61.2 bits (147), Expect = 2e-09
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 78 EKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGS 137
++A+ EE F++ E+ + E+ Q L++ + E + KG
Sbjct: 199 QEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEE----SSKQKGI 254
Query: 138 SNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFK 197
+ +E DEE+EEEE+++++DE E++ EE EE EEE + +E+ E + D F+
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQ 314
Query: 198 EQRDRPEAQEQSE 210
E AQ+ E
Sbjct: 315 EDTSHTSAQKAPE 327
Score = 35.4 bits (80), Expect = 0.14
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 15/130 (11%)
Query: 86 EEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDE 145
EE + EE+ +EE EE E+ ++ + + E + +E +E
Sbjct: 246 EESSKQKGILSHEEEDEEEEEEEEEEEEDEEE-------------EEEEEEEEEEEEEEE 292
Query: 146 E-DEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPE 204
E +EEEE++++++E D E+T+ KA E +R E+ + E R +
Sbjct: 293 EEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPE-LRGPESPSPKPEYSVIVEVRSDDD 351
Query: 205 AQEQSEKKIS 214
E + + S
Sbjct: 352 KDEDTHSRKS 361
Score = 29.6 bits (65), Expect = 7.7
Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 10/175 (5%)
Query: 2 SEHSRNSDQEELLDEEINEDEILANLSAEELKEL--QSEMEVMAPDPSLPVGMIQKDQTD 59
+E + + + E+ L + + E + ++ E ++L QS + + + S G++ ++ D
Sbjct: 202 AEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEED 261
Query: 60 KPPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYL 119
+ + E+ EEE + EE+ +EE EE E+
Sbjct: 262 EEEEEEEEEE--------EEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIF 313
Query: 120 KEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEE 174
+E ++ E +G + E E DDD+ ED E E
Sbjct: 314 QEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDESE 368
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 58.5 bits (140), Expect = 2e-08
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 51/306 (16%)
Query: 107 EIEKRNKNMAQYLKEKLNNEIVANKRE--SKGSSN------------IQETDEEDEE-EE 151
E+++R +Q KE++N+E + E S GSS+ ++E EEDEE EE
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 152 DDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
D ++D+E ++DGEE EE EEE + +E+ E +++RD+ E +
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYE-----------QDERDQKEEGNDYDT 266
Query: 212 KISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKNDPDMKELNLNNIENIPK--- 268
+ D ++ SF S R SG+ TD ++ RK + + + +
Sbjct: 267 RSEASDSGSESV--SFTDGSVR-SGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESY 323
Query: 269 -------EMLLDFVNAMKKNKHIK--------TFSLANVGADENVAFALANMLRENRSIT 313
E L V A++K++ K F L ENV+ A A + +
Sbjct: 324 AGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVN 383
Query: 314 TLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHAEMEIARLLKANNTLLKM 373
+ F + + ++ I + + R ++ HH I +L A + +
Sbjct: 384 EKKLNLAFRSARSVILIFSVRESGKFQGFARLSSE----SHHGGSPIHWVLPAGMSAKML 439
Query: 374 GYHFEL 379
G F++
Sbjct: 440 GGVFKI 445
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 57.8 bits (138), Expect = 3e-08
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 53 IQKDQTDKPPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRN 112
+ K +D + KSL +Y+ KAS+R L+ K +E+ EE+E+
Sbjct: 999 VTKPCSDTSESDLETRKSLEVVLYY-KASQRKLD----------GLAKEEEKKEEMEEEK 1047
Query: 113 KNMAQYLKEKLNNEIV---ANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEET 169
K + + KE+ +E+V A+ E+K + + +E +E+ EEEE ++D +E EDD + S E+
Sbjct: 1048 KQVKEEAKEQCGDELVAEPADPEEAKSTEDQEENEEDKEEEEKEEDSEEEEDDADSSLES 1107
Query: 170 NRE 172
E
Sbjct: 1108 PEE 1110
Score = 31.6 bits (70), Expect = 2.0
Identities = 43/214 (20%), Positives = 86/214 (40%), Gaps = 39/214 (18%)
Query: 2 SEHSRN--SDQEEL--LDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQ 57
+EH + S QE+L + E+ + E + E+ L++EME+ + +PS +G
Sbjct: 162 TEHESDIASLQEDLCRMQNELEDMERIRGDYEMEIASLRAEMEMKSSEPSGSLG------ 215
Query: 58 TDKPPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQ 117
L DY + L+E R F+ EE+ +++ N ++
Sbjct: 216 -------------LSDY----SGLQEELQELRERYHFLN------EEYRALQESNSSLTG 252
Query: 118 YLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKA 177
L + + S + T E + E D + + E + R++ A
Sbjct: 253 QLADLESERTQRATERWLQSQTLSMTSAESQTSEMDFLEPDPE------MQLLRQQLRDA 306
Query: 178 KEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
+EQ+ +N CQ++ + + Q R ++E+ +
Sbjct: 307 EEQMHGMKNKCQELCCELEELQHHRQVSEEEQRR 340
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 55.8 bits (133), Expect = 1e-07
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 43/217 (19%)
Query: 28 SAEELKELQSEMEVMAPDPSL----------------PVGMIQKDQTDKPPTGNFNHKSL 71
+AE+ K + E+ M P+ P+ QK + G NH L
Sbjct: 497 AAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPL 556
Query: 72 VDYMY-----WEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNE 126
+ M W++ S+ E + + ++K + H ++ ++ + K E
Sbjct: 557 KERMVEIGSRWQRISQSQKEHYK---KLAEEQQKQYKVHLDLWVKSLSPQDRAAYK---E 610
Query: 127 IVANKRES----------------KGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETN 170
++NKR+S + S +E DEEDE++ED+D+++E +++G+ SE+
Sbjct: 611 YISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGG 670
Query: 171 REEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQE 207
E ++++ + + N + D+ E D E E
Sbjct: 671 DSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 707
Score = 45.1 bits (105), Expect = 2e-04
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 96 KSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKG---SSNIQETDEEDEEEED 152
KSE + +E +E ++ + + ++E + ES S + E +E+DE+E+D
Sbjct: 637 KSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDD 696
Query: 153 DDDDDEGEDDGEESEETNREEEGKAKEQIRN 183
D+DDDE ED+ E ++ G + + N
Sbjct: 697 DEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 43.5 bits (101), Expect = 5e-04
Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 93 TFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEED 152
T ++S+ +++E+ EE E +++ + ++ N + + +S SS+ E+++ DE EED
Sbjct: 632 TTLQSKSESEEDDEEDED-DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED 690
Query: 153 D--DDDDEGEDDGEESEETNREEEGKAKEQIRNCENN 187
D +DDDE +D+ E++E + + ++N
Sbjct: 691 DEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 55.8 bits (133), Expect = 1e-07
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 43/217 (19%)
Query: 28 SAEELKELQSEMEVMAPDPSL----------------PVGMIQKDQTDKPPTGNFNHKSL 71
+AE+ K + E+ M P+ P+ QK + G NH L
Sbjct: 497 AAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPL 556
Query: 72 VDYMY-----WEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNE 126
+ M W++ S+ E + + ++K + H ++ ++ + K E
Sbjct: 557 KERMVEIGSRWQRISQSQKEHYK---KLAEEQQKQYKVHLDLWVKSLSPQDRAAYK---E 610
Query: 127 IVANKRES----------------KGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETN 170
++NKR+S + S +E DEEDE++ED+D+++E +++G+ SE+
Sbjct: 611 YISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGG 670
Query: 171 REEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQE 207
E ++++ + + N + D+ E D E E
Sbjct: 671 DSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 707
Score = 45.1 bits (105), Expect = 2e-04
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 96 KSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKG---SSNIQETDEEDEEEED 152
KSE + +E +E ++ + + ++E + ES S + E +E+DE+E+D
Sbjct: 637 KSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDD 696
Query: 153 DDDDDEGEDDGEESEETNREEEGKAKEQIRN 183
D+DDDE ED+ E ++ G + + N
Sbjct: 697 DEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 43.5 bits (101), Expect = 5e-04
Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 93 TFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEED 152
T ++S+ +++E+ EE E +++ + ++ N + + +S SS+ E+++ DE EED
Sbjct: 632 TTLQSKSESEEDDEEDED-DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED 690
Query: 153 D--DDDDEGEDDGEESEETNREEEGKAKEQIRNCENN 187
D +DDDE +D+ E++E + + ++N
Sbjct: 691 DEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 55.8 bits (133), Expect = 1e-07
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 43/217 (19%)
Query: 28 SAEELKELQSEMEVMAPDPSL----------------PVGMIQKDQTDKPPTGNFNHKSL 71
+AE+ K + E+ M P+ P+ QK + G NH L
Sbjct: 534 AAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPL 593
Query: 72 VDYMY-----WEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNE 126
+ M W++ S+ E + + ++K + H ++ ++ + K E
Sbjct: 594 KERMVEIGSRWQRISQSQKEHYK---KLAEEQQKQYKVHLDLWVKSLSPQDRAAYK---E 647
Query: 127 IVANKRES----------------KGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETN 170
++NKR+S + S +E DEEDE++ED+D+++E +++G+ SE+
Sbjct: 648 YISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGG 707
Query: 171 REEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQE 207
E ++++ + + N + D+ E D E E
Sbjct: 708 DSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 744
Score = 45.1 bits (105), Expect = 2e-04
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 96 KSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKG---SSNIQETDEEDEEEED 152
KSE + +E +E ++ + + ++E + ES S + E +E+DE+E+D
Sbjct: 674 KSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDD 733
Query: 153 DDDDDEGEDDGEESEETNREEEGKAKEQIRN 183
D+DDDE ED+ E ++ G + + N
Sbjct: 734 DEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
Score = 43.5 bits (101), Expect = 5e-04
Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 93 TFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEED 152
T ++S+ +++E+ EE E +++ + ++ N + + +S SS+ E+++ DE EED
Sbjct: 669 TTLQSKSESEEDDEEDED-DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED 727
Query: 153 D--DDDDEGEDDGEESEETNREEEGKAKEQIRNCENN 187
D +DDDE +D+ E++E + + ++N
Sbjct: 728 DEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 54.3 bits (129), Expect = 3e-07
Identities = 35/140 (25%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 85 LEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRES--KGSSNIQE 142
+EEE V + F+K + ++E + +K + + + E + E + + ES +
Sbjct: 2184 IEEEEV-IPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQES 2242
Query: 143 TDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDR 202
E+EEE +++++ E E+ EE EE EEEG+ K+ + E ++ +K +E +++
Sbjct: 2243 LSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEK 2302
Query: 203 PEAQEQSEKKISKLDPKKLA 222
E E+ E+ +S+ + + L+
Sbjct: 2303 EEVFEEKEEIMSEEETESLS 2322
Score = 52.8 bits (125), Expect = 8e-07
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 11 EELLDEE----INEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGNF 66
E +LD+E I E+E++ L + + E D Q D+ + +
Sbjct: 2173 EVILDDEEEGGIEEEEVIPFLK----RRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSE 2228
Query: 67 NHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNE 126
+SL+D + +++ EEER + EE +EE E E+ Q KE+ E
Sbjct: 2229 EMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEE---E 2285
Query: 127 IVANKRESKGSSNIQETDEEDEEEEDDDDDDEGE---DDGEESEETNREEEGKAKEQIRN 183
K++ K +QE +E EE+E+ ++E E D+ EE E + EEE +++I
Sbjct: 2286 EKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILK 2345
Query: 184 CENNCQQVTDKAFKEQRDRPEAQEQSEKKISKL 216
E K FK Q R ++ E+ +S L
Sbjct: 2346 KE--------KQFKLQEQRRKSLRGRERVLSIL 2370
Score = 42.7 bits (99), Expect = 9e-04
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 9 DQEELLDEEINEDEILANLSAEE--LKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGNF 66
D+ +L EEI ++ L +E L QS++++ D S + KD+
Sbjct: 2086 DERKLTQEEIKMTKMKRALFVKERRLSIEQSKLDIKEWDFSEKRSELTKDEKKLAR---- 2141
Query: 67 NHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEK--------RNKNMAQY 118
+ L + M RRM+ +E + E K +H E+ + + +
Sbjct: 2142 KQRKLANKM------RRMINKEE---KMTEEESKLARKHSEVILDDEEEGGIEEEEVIPF 2192
Query: 119 LKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAK 178
LK + A + + + DE + EE ++ + D+ E+ E + EEE + +
Sbjct: 2193 LKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEERE 2252
Query: 179 EQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKK 220
E+ E ++ E+ +R E +E EK++ K + +K
Sbjct: 2253 EEEEREEEEVRE-------EEEERKEEEEGEEKQVEKEEEEK 2287
Score = 40.8 bits (94), Expect = 0.003
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 27 LSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPT---GNFNHKSLVDYMYWEKASRR 83
L+ EE K Q E ++ + L ++ Q D+ G F K EK S+
Sbjct: 1595 LAQEEEKLAQEERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEETLAQRGEKLSQE 1654
Query: 84 MLEEERVPVTFVKSEEKTQEEHEEIEKRN------KN-MAQYLKEKLNNEIVANKRESKG 136
+ + K EK E E++ K+ KN +AQ ++E E + +E +
Sbjct: 1655 AEKLAQKRKKLAKKWEKVAREEEKLAKKGGKLAEVKNILAQKVEELPQREQNLDWQEKEL 1714
Query: 137 SSNIQETDEEDEE---EEDDDDDDEGE--------DDGEESEETNREEEGKAKEQIRNCE 185
+ ++E + + EE +E++ + +EG+ + EE+ RE+ + + ++ E
Sbjct: 1715 AQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSEEETKLAQEE 1774
Query: 186 NNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLAL 223
Q +K + + PE +E+ +K +L KK+ L
Sbjct: 1775 ELLIQEKEKLAQHKEKMPEEEERLGRKREQLIEKKMKL 1812
Score = 40.4 bits (93), Expect = 0.004
Identities = 29/148 (19%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 76 YWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESK 135
++ + +L+E + EE+ +EE EE E+ E++ E K E +
Sbjct: 2225 HFSEEMESLLDELEKQESLSSEEEEEREEEEEREE----------EEVREEEEERKEEEE 2274
Query: 136 GSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKA 195
G ++ ++E+EE++ + + E+ E+ E +EE ++E+ + + ++ +
Sbjct: 2275 GEE--KQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCS 2332
Query: 196 FKEQRDRPEAQEQSEKKISKLDPKKLAL 223
+E+ DR + + EK+ + ++ +L
Sbjct: 2333 LEEEVDREKEILKKEKQFKLQEQRRKSL 2360
Score = 36.2 bits (82), Expect = 0.082
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 77 WEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKG 136
WEK R+L+EE ++ EK E E +++ K + K+ N + + +E
Sbjct: 1485 WEK---RLLQEEE---KLHQAGEKLSPEEEMLQEDKKLKWEEWKQVWENMLSSKSKE--- 1535
Query: 137 SSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAF 196
++ ++EE+ ++E +GEE E+ EE+ +E+ + + ++ +
Sbjct: 1536 --------QQYKDEEEVTLEEEVSREGEEKEQQVTEEQRHIQEEHKWARIHRKRARAEKK 1587
Query: 197 KEQRDRPEAQE-----QSEKKISKLDPKKLA 222
+ Q +R AQE Q E+++++ + +KLA
Sbjct: 1588 RAQEERKLAQEEEKLAQEERQLAQ-EERKLA 1617
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 54.3 bits (129), Expect = 3e-07
Identities = 38/155 (24%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 98 EEKTQEEH-EEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDD 156
+ KTQ++ +E + K A K ++ V +S G+ ++ E +E++ EE +D+D
Sbjct: 60 KRKTQDKQPQEPAPKRKPFAV----KADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDND 115
Query: 157 DEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKL 216
+ G++D EE EE +REEE + +E+ + + + + V D+ +E+ + E +E+ +
Sbjct: 116 EPGDED-EEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENE----- 169
Query: 217 DPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKN 251
D + +T ++ + + N + D V K+
Sbjct: 170 DHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAKS 204
Score = 45.1 bits (105), Expect = 2e-04
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 141 QETDEEDEEEED---DDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFK 197
+E D E+EEE + +DDD++GED +E EE EEE + +E+ + + NC
Sbjct: 125 EEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDT 184
Query: 198 EQRDRPEAQEQSEKKI---SKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKNDPD 254
E+ D + + ++ S L+ K+A D ++ + +++++ + ++D D
Sbjct: 185 EKDDNNNDEYDNYDELVAKSLLNLGKIAEDAAY------RARTESEMNSNTSNSLEDDSD 238
Query: 255 MKELNLNNIENIPKEMLLDFV 275
E NL + ++ D V
Sbjct: 239 KNE-NLGRKSELSLDLDSDVV 258
Score = 32.0 bits (71), Expect = 1.5
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 96 KSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDD 155
+ EE +EE EEIE+ +++ + + E V ++ E + +E +EE+EEE +D
Sbjct: 123 EDEEGDREEEEEIEEEDED------DDEDGEDVEDEEEEEE----EEEEEEEEEENEDHQ 172
Query: 156 ---------DDEGEDDGEESEETNREE 173
D +DD E N +E
Sbjct: 173 MNCHNTRIMQDTEKDDNNNDEYDNYDE 199
Score = 29.6 bits (65), Expect = 7.7
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 20/100 (20%)
Query: 95 VKSEEKTQEEHEEIEKRNKN------------MAQYLKEKLNNEIVANKRE--SKGSSNI 140
V+ EE+ +EE EE E+ +N M K+ NN+ N E +K N+
Sbjct: 149 VEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAKSLLNL 208
Query: 141 QETDEE------DEEEEDDDDDDEGEDDGEESEETNREEE 174
+ E+ E E + + + EDD +++E R+ E
Sbjct: 209 GKIAEDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKSE 248
>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
Length = 732
Score = 53.9 bits (128), Expect = 4e-07
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 99 EKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDE 158
+K QEE E +EK + ++L E + K E + ++E + EEE ++++
Sbjct: 414 QKEQEEQERVEKEEQ-------DRLEREELKRKAEEE-RLRLEEEARKQEEERKRQEEEK 465
Query: 159 GEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDP 218
+ +GEE + E + KA+E++ E Q+ +KA E+ + EA E ++++ +
Sbjct: 466 KKQEGEEKRKAGEEAKRKAEEELLLKEKQEQEKQEKAMIEK--QKEAAETKAREVA--EQ 521
Query: 219 KKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKND--PDMKE 257
+L + L++ + +D ++R RK+D P +K+
Sbjct: 522 MRLEREQIMLQIEQERLERKKRIDEIMKRTRKSDVPPQVKK 562
Score = 29.6 bits (65), Expect = 7.7
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 94 FVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDD 153
F+KS+E+ + E E+R K +A ++ L + A + K ++E + EE+
Sbjct: 48 FLKSDERQRLAKERREEREKCLAAREQQILEKQKRARLQYEK---QMEERWRKLEEQRQR 104
Query: 154 DDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQV 191
+D + E+ ++ REEE + + +R QQ+
Sbjct: 105 EDQKRAAVE-EKRKQKLREEEERLEAMMRRSLERTQQL 141
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 53.5 bits (127), Expect = 5e-07
Identities = 78/373 (20%), Positives = 158/373 (42%), Gaps = 37/373 (9%)
Query: 53 IQKDQTDKPPTGNFNHKSLVDY----MYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEI 108
+Q+++ K F K +Y M EK + ++E+++ ++E K Q+E EE
Sbjct: 350 MQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQALMEQQQR-----EAERKAQKEKEEW 404
Query: 109 EKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEE 168
E++ + + + ++ ++ KR K Q E EEE D + E +E E
Sbjct: 405 ERKQRELQE---QEWKKQLELEKRLEK-----QRELERQREEERRKDIERREAAKQELER 456
Query: 169 TNREE-EGKAKEQIRNCENNCQQVTDKAFKEQRD---RPEAQEQSEKKIS-KLDPKKLAL 223
R E E ++++ N +N Q+ + ++++ EA ++IS +L +L
Sbjct: 457 QRRLEWERIRRQELLNQKNREQEEIVRLNSKKKNLHLELEALNGKHQQISGRLQDVRLKK 516
Query: 224 DTSFLKVSTRPSGNQTDLDGSLRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKH 283
T K Q DL+ + +++ +++E I +P++ LL N+
Sbjct: 517 QTQ--KTELEVLDKQCDLE--IMEIKQLQQELQEYQNKLIYLVPEKQLL--------NER 564
Query: 284 IKTFSLANVGADENVAFALANMLRENRSITTLNIESNFITGKGIVAIMRCLQFNETLTEL 343
IK +N D V+ L + L + + + + + FN L EL
Sbjct: 565 IKNMQFSNT-PDSGVSLLHKKSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQLKEL 623
Query: 344 R--FHNQRHMLGHHAEMEIARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQRQKR 401
R ++ Q+ L +++ +L + L++ +L N K+ ++
Sbjct: 624 RETYNTQQLALEQLYKIKRDKLKEIERKRLELMQKKKLEDEAARKAKQGKENLWKENLRK 683
Query: 402 QEEQKQQQLKEQK 414
+EE+KQ++L+E+K
Sbjct: 684 EEEEKQKRLQEEK 696
Score = 35.0 bits (79), Expect = 0.18
Identities = 42/212 (19%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 12 ELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGNFN--HK 69
E+LD++ + + + +EL+E Q+++ + P+ L I+ Q P + HK
Sbjct: 524 EVLDKQCDLEIMEIKQLQQELQEYQNKLIYLVPEKQLLNERIKNMQFSNTPDSGVSLLHK 583
Query: 70 SLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVA 129
++ E+ +R+ E+ E++T + E++ N N + L+E N + +A
Sbjct: 584 KSLEK---EELCQRLKEQ------LDALEKETASKLSEMDSFN-NQLKELRETYNTQQLA 633
Query: 130 ---------NKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQ 180
+K + ++ ++ E+E +G+++ + EEE + + Q
Sbjct: 634 LEQLYKIKRDKLKEIERKRLELMQKKKLEDEAARKAKQGKENLWKENLRKEEEEKQKRLQ 693
Query: 181 IRNCENNCQQVTDKAFKEQRDRPEAQEQSEKK 212
+ Q+ KA ++QR + + EKK
Sbjct: 694 EEKTQEKIQEEERKAEEKQRKDKDTLKAEEKK 725
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 53.5 bits (127), Expect = 5e-07
Identities = 43/200 (21%), Positives = 102/200 (51%), Gaps = 27/200 (13%)
Query: 11 EELLDEEINEDEILANLSAEE-----LKELQSEMEV-MAPDPSLPV-GMIQKDQTDKPPT 63
E++++++ E E + + +E +KE++ E E + P P+ I++ + KP
Sbjct: 410 EKVVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPSL 469
Query: 64 GNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKL 123
G+ K+L+ E +E+ V + K E++E ++ ++ + + + E L
Sbjct: 470 GS--KKNLL-----ESIPTHSDQEKEVNI-------KKPEDNENLDDKDDDTTR-VDESL 514
Query: 124 NNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKA-----K 178
N ++ A + ++K + ++ED+EE ++++++E E++ E+ ++ N EEE + K
Sbjct: 515 NIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNEEEEFECYPPGMK 574
Query: 179 EQIRNCENNCQQVTDKAFKE 198
Q+R Q++ + + K+
Sbjct: 575 VQVRYGRGKNQKMYEASIKD 594
Score = 36.6 bits (83), Expect = 0.063
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 85 LEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETD 144
+EEER + EEK E+ EIE++ +K L ++ N ES + + QE +
Sbjct: 441 MEEER---NIIPREEKPIED--EIERKEN-----IKPSLGSK--KNLLESIPTHSDQEKE 488
Query: 145 EEDEEEEDDDD-DDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRP 203
++ ED+++ DD+ +D E N + E + ++ E N ++ D E+ +
Sbjct: 489 VNIKKPEDNENLDDKDDDTTRVDESLNIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEE 548
Query: 204 EAQEQSEKKISKLDPKKLALDTSFLKVSTR 233
E +E+ E + ++ +KV R
Sbjct: 549 EEEEEDEDDDDNNEEEEFECYPPGMKVQVR 578
Score = 36.2 bits (82), Expect = 0.082
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 117 QYLKEKLNNEIVAN-KRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEG 175
Q L+ + I AN K E K S+ E +EE+EEE+D+ + ++ + EE E EE
Sbjct: 251 QALEFHKSRTIPANWKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERE 310
Query: 176 KAKEQI 181
+Q+
Sbjct: 311 NFLQQL 316
Score = 34.3 bits (77), Expect = 0.31
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 145 EEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRP 203
+ED + ++++E EDD +E E+ + EEE + + EN QQ+ F E R P
Sbjct: 270 KEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQL--YKFMEDRGTP 326
Score = 29.6 bits (65), Expect = 7.7
Identities = 48/246 (19%), Positives = 85/246 (34%), Gaps = 42/246 (17%)
Query: 5 SRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTG 64
++NSD + EI IL L A E SE E + ++ + D
Sbjct: 687 AKNSDTAHIKSIEITS--ILNGLQASESSAEDSEQEDERGAQDMDNNGKEESKIDHLTN- 743
Query: 65 NFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSE-----------------EKTQEEHEE 107
N L+ E+ S +LEE +V V S+ E T E +E
Sbjct: 744 --NRNDLISKE--EQNSSSLLEENKVHADLVISKPVSKSPERLRKDIEVLSEDTDYEEDE 799
Query: 108 IEKRNKNMAQYLKEKLNNEIVAN------------------KRESKGSSNIQETDEEDEE 149
+ K+ K++ + +K + + K+E K + E
Sbjct: 800 VTKKRKDVKKDTTDKSSKPQIKRGKRRYCNTEECLKTGSPGKKEEKAKNKESLCMENSSN 859
Query: 150 EEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQS 209
D+D++E + +++ N EE + + + +V +K K + E + S
Sbjct: 860 SSSDEDEEETKAKMTPTKKYNGLEEKRKSLRTTGFYSGFSEVAEKRIKLLNNSDERLQNS 919
Query: 210 EKKISK 215
K K
Sbjct: 920 RAKDRK 925
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 53.1 bits (126), Expect = 6e-07
Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 97 SEEKTQEEHEEIEKRN--------KNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDE 148
SEE ++ E E+ + +N Y ++K I + S + + E +EE++
Sbjct: 1352 SEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEK 1411
Query: 149 EEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNC--ENNCQQVTDKAFKEQRDRPEAQ 206
EEE++++++E E+ EE E + + GK +++IR ++ + T A KE+ +R +
Sbjct: 1412 EEEEEEEEEEEEE--EEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRI 1469
Query: 207 EQSEKKISKL 216
+ E++ KL
Sbjct: 1470 AEREREREKL 1479
Score = 39.3 bits (90), Expect = 0.010
Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 7 NSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQT-DKPPTGN 65
++D E + +++ +EI ANLS++E E E + G ++ D+
Sbjct: 1226 DNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPE----EGKKRTGKQNEENPGDEEAKNQ 1281
Query: 66 FNHKSLVDYMYWEKAS-RRMLEEERVPVTFVKS--EEKTQ-EEHEEIEKRNKNMAQYLKE 121
N +S D +K R L ++ V+ +S E+KT+ +EH+E++ RN+ K
Sbjct: 1282 VNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRR-----KV 1336
Query: 122 KLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQI 181
+ ++ +ES S + E+++E E E++ ++ + K +E
Sbjct: 1337 SSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQED- 1395
Query: 182 RNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPK 219
+ EN ++ KE+ + E +E+ E++ D K
Sbjct: 1396 SSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSK 1433
Score = 37.0 bits (84), Expect = 0.048
Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 15/230 (6%)
Query: 8 SDQEELLDEEINEDEILANLS--AEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGN 65
S Q E +D+ + DE+LA L + S+ ++ + K Q K G
Sbjct: 681 SKQSETVDQNSDSDEMLAILKEVSRMSHSSSSDTDINEIHTNHKTLYDLKTQAGKDDKGK 740
Query: 66 FNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNN 125
KS ++ + + + +++ ++ E+EK K+M++ +
Sbjct: 741 RKRKSSTSGSDFDTKKGKSAKSSIISKKKRQTQSESSNYDSELEKEIKSMSKIGAARTTK 800
Query: 126 EIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCE 185
+ + N ++ S EDE+ D++G + + S+E + ++ + +E R
Sbjct: 801 KRIPNTKDFDSS--------EDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQE--RETF 850
Query: 186 NNCQQVTDK--AFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTR 233
++ + DK E RDR ++Q+ +D K + SF + R
Sbjct: 851 SSAEGTVDKDTTIMELRDRLPKKQQASASTDGVD-KLSGKEQSFTSLEVR 899
Score = 33.1 bits (74), Expect = 0.69
Identities = 35/172 (20%), Positives = 67/172 (38%), Gaps = 11/172 (6%)
Query: 101 TQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRES--KGSSNIQETDEEDEEEEDDDDDDE 158
+ + EE + NK Q K IV K+ + + S+ ++ D D +DDD+
Sbjct: 1116 SSSDAEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQ 1175
Query: 159 ---GEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISK 215
GE +E + E C+++ + K+ D + E +I+
Sbjct: 1176 NSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIA- 1234
Query: 216 LDPKKLALDTSFLKVSTRPSGNQTD--LDGSLRRVRKNDPDMKELNLNNIEN 265
KK+ L+ +S+ G+ D +G R ++N+ + + N N
Sbjct: 1235 ---KKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVN 1283
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 53.1 bits (126), Expect = 6e-07
Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 97 SEEKTQEEHEEIEKRN--------KNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDE 148
SEE ++ E E+ + +N Y ++K I + S + + E +EE++
Sbjct: 1390 SEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEK 1449
Query: 149 EEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNC--ENNCQQVTDKAFKEQRDRPEAQ 206
EEE++++++E E+ EE E + + GK +++IR ++ + T A KE+ +R +
Sbjct: 1450 EEEEEEEEEEEEE--EEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRI 1507
Query: 207 EQSEKKISKL 216
+ E++ KL
Sbjct: 1508 AEREREREKL 1517
Score = 39.3 bits (90), Expect = 0.010
Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 7 NSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQT-DKPPTGN 65
++D E + +++ +EI ANLS++E E E + G ++ D+
Sbjct: 1264 DNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPE----EGKKRTGKQNEENPGDEEAKNQ 1319
Query: 66 FNHKSLVDYMYWEKAS-RRMLEEERVPVTFVKS--EEKTQ-EEHEEIEKRNKNMAQYLKE 121
N +S D +K R L ++ V+ +S E+KT+ +EH+E++ RN+ K
Sbjct: 1320 VNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRR-----KV 1374
Query: 122 KLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQI 181
+ ++ +ES S + E+++E E E++ ++ + K +E
Sbjct: 1375 SSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQED- 1433
Query: 182 RNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPK 219
+ EN ++ KE+ + E +E+ E++ D K
Sbjct: 1434 SSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSK 1471
Score = 37.0 bits (84), Expect = 0.048
Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 15/230 (6%)
Query: 8 SDQEELLDEEINEDEILANLS--AEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGN 65
S Q E +D+ + DE+LA L + S+ ++ + K Q K G
Sbjct: 719 SKQSETVDQNSDSDEMLAILKEVSRMSHSSSSDTDINEIHTNHKTLYDLKTQAGKDDKGK 778
Query: 66 FNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNN 125
KS ++ + + + +++ ++ E+EK K+M++ +
Sbjct: 779 RKRKSSTSGSDFDTKKGKSAKSSIISKKKRQTQSESSNYDSELEKEIKSMSKIGAARTTK 838
Query: 126 EIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCE 185
+ + N ++ S EDE+ D++G + + S+E + ++ + +E R
Sbjct: 839 KRIPNTKDFDSS--------EDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQE--RETF 888
Query: 186 NNCQQVTDK--AFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTR 233
++ + DK E RDR ++Q+ +D K + SF + R
Sbjct: 889 SSAEGTVDKDTTIMELRDRLPKKQQASASTDGVD-KLSGKEQSFTSLEVR 937
Score = 33.1 bits (74), Expect = 0.69
Identities = 35/172 (20%), Positives = 67/172 (38%), Gaps = 11/172 (6%)
Query: 101 TQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRES--KGSSNIQETDEEDEEEEDDDDDDE 158
+ + EE + NK Q K IV K+ + + S+ ++ D D +DDD+
Sbjct: 1154 SSSDAEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQ 1213
Query: 159 ---GEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISK 215
GE +E + E C+++ + K+ D + E +I+
Sbjct: 1214 NSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIA- 1272
Query: 216 LDPKKLALDTSFLKVSTRPSGNQTD--LDGSLRRVRKNDPDMKELNLNNIEN 265
KK+ L+ +S+ G+ D +G R ++N+ + + N N
Sbjct: 1273 ---KKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVN 1321
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 52.8 bits (125), Expect = 8e-07
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 86 EEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDE 145
+EE+V K EE+ Q++ E++ K+ + M + ++ E K++ + Q ++
Sbjct: 239 QEEQVQ----KQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQTEQEEQTGEQ 294
Query: 146 EDEEEEDDDDDDEGEDDGEESEETNREEE---GKAKEQIRNCENNCQQVTDKAFKEQRDR 202
E++ E ++ E E+ E EE RE+E GK +EQ+ + + ++ +K++
Sbjct: 295 EEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQM 354
Query: 203 PEAQEQSEKK 212
E +EQ +K+
Sbjct: 355 GEQEEQMQKQ 364
Score = 46.2 bits (108), Expect = 8e-05
Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 78 EKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGS 137
+K +M E+E K EE+ E+ E+++K+ + + + ++ E ++E +
Sbjct: 216 QKQEEQMGEQEE---QMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMR 272
Query: 138 SNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFK 197
++ ++ E+ E ++ E E+ E EE RE+E EQ+R E ++ ++ K
Sbjct: 273 EQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQE----EQMREQEEQMREQEEQMGK 328
Query: 198 EQRDRPEAQEQ 208
++ E +EQ
Sbjct: 329 QEEQMWEQKEQ 339
Score = 46.2 bits (108), Expect = 8e-05
Identities = 33/166 (19%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 96 KSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDD 155
K EE+ E+ E++ K+ + M + ++ E K+E + EE E+++
Sbjct: 217 KQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQ-----MRKQEEQMREQEEQM 271
Query: 156 DDEGEDDGEESEETNREEE-GKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKIS 214
++ E ++ E+T +EE+ G+ +EQ+R E ++ ++ +++ E +EQ K+
Sbjct: 272 REQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEE 331
Query: 215 KLDPKKLAL---DTSFLKVSTRPSGNQTDLDGSLRRVRKNDPDMKE 257
++ +K + K + + + +VRK + M++
Sbjct: 332 QMWEQKEQMWEQKEQMWKQEEQMGEQEEQMQKQEEQVRKQEEQMRK 377
Score = 45.1 bits (105), Expect = 2e-04
Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 3 EHSRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMI--QKDQTDK 60
E R +++ L +E E E E+++E + +M + Q++Q K
Sbjct: 269 EQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGK 328
Query: 61 PPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK 120
+ K + WE+ + +EE++ + EE+ Q++ E++ K+ + M + +
Sbjct: 329 QEEQMWEQKEQM----WEQKEQMWKQEEQMG----EQEEQMQKQEEQVRKQEEQMRKQEE 380
Query: 121 EKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEE--GKAK 178
+ E K+E + ++ E+ E+ + + E GE+ E+ ++EE G+ K
Sbjct: 381 QMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQE-----EQMGEQKEQMRKQEEHMGEQK 435
Query: 179 E 179
E
Sbjct: 436 E 436
Score = 43.5 bits (101), Expect = 5e-04
Identities = 38/217 (17%), Positives = 89/217 (41%), Gaps = 11/217 (5%)
Query: 15 DEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGNFNHKSLVDY 74
+E++ E E E++ E + +M +QK + K
Sbjct: 205 EEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQM 264
Query: 75 MYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRES 134
E+ R E+ + EE+T E+ E++ ++ + M + ++ E ++E
Sbjct: 265 REQEEQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEE 324
Query: 135 KGSSNIQETDEEDEE--EEDDDDDDEGEDDGEESEETNREEEG---------KAKEQIRN 183
+ ++ E+ E+ E+ + + E GE+ E+ ++EE K +EQ+R
Sbjct: 325 QMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEEQMQKQEEQVRKQEEQMRKQEEQMRK 384
Query: 184 CENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKK 220
E ++ ++ +++ E +EQ ++ ++ +K
Sbjct: 385 QEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQK 421
Score = 42.4 bits (98), Expect = 0.001
Identities = 41/211 (19%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 9 DQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGNFNH 68
+Q + +E++ + E E+++E + +M + QK+QT++
Sbjct: 241 EQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQM-----LKQKEQTEQEEQTGEQE 295
Query: 69 KSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKL--NNE 126
+ + + E+ R E+ R + EE+ +E+ E++ K+ + M + KE++ E
Sbjct: 296 EQMREQ---EEQMREQEEQMR------EQEEQMREQEEQMGKQEEQMWEQ-KEQMWEQKE 345
Query: 127 IVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEE----------GK 176
+ + E G Q +E++ + ++ + E+ + EE R++E G+
Sbjct: 346 QMWKQEEQMGEQEEQMQKQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGE 405
Query: 177 AKEQIRNCENNCQQVTDKAFKEQRDRPEAQE 207
KEQ+R E + ++ K++ E +E
Sbjct: 406 QKEQMREQEEQMGEQKEQMRKQEEHMGEQKE 436
Score = 40.8 bits (94), Expect = 0.003
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 98 EEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDD 157
E++ Q +E + R + +E E RE +G QE ++EE+ + ++
Sbjct: 154 EQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQMGEQEGQMGEQEEQMGEQEE 213
Query: 158 E----GEDDGEESEETNREEE--GKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
+ E GE+ E+ ++EE G+ +EQ++ E Q+ ++ K++ E +EQ +
Sbjct: 214 QMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMRE 273
Query: 212 KISKLDPKK 220
+ ++ +K
Sbjct: 274 QEEQMLKQK 282
Score = 36.6 bits (83), Expect = 0.063
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 79 KASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSS 138
K +R LE +++P+ E + +E+ ++ ++ + + +E E RE +G
Sbjct: 35 KELKRKLETDKIPLP---QEGQVREQEGQVREQEGQVRE--QEGQVREQEGQVREQEGQV 89
Query: 139 NIQE---TDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKA 195
QE ++E + E + E E E E RE+EG+ +EQ QV ++
Sbjct: 90 REQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQE 149
Query: 196 FKEQRDRPEAQEQ 208
+ + + +EQ
Sbjct: 150 GQVREQEGQVREQ 162
Score = 35.4 bits (80), Expect = 0.14
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 102 QEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEG-- 159
QEE + +E + ++KE L ++ +K ++E + + E+E + EG
Sbjct: 17 QEELQLVETEKSEIQLHIKE-LKRKLETDKIPLPQEGQVREQEGQVREQEGQVREQEGQV 75
Query: 160 -EDDGE--ESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQ 208
E +G+ E E RE+EG+ +EQ QV ++ + + + +EQ
Sbjct: 76 REQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQ 127
Score = 34.3 bits (77), Expect = 0.31
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 17/196 (8%)
Query: 24 LANLSAEELKE----LQSEMEVMAPDPS---LPVGMIQKD-QTDKPPTGNFNHKSLVDYM 75
+ ++ EELKE LQ E++++ + S L + +++ +TDK P +
Sbjct: 1 MPRITNEELKEKNAELQEELQLVETEKSEIQLHIKELKRKLETDKIPLPQEGQVREQEGQ 60
Query: 76 YWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESK 135
E+ + +E +V E++ Q +E + R + +E E RE +
Sbjct: 61 VREQEGQVREQEGQV------REQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQE 114
Query: 136 GSSNIQE---TDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVT 192
G QE ++E + E + E E E E RE+EG+ +EQ QV
Sbjct: 115 GQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVR 174
Query: 193 DKAFKEQRDRPEAQEQ 208
++ + + + +EQ
Sbjct: 175 EQEGQVREQEGQVREQ 190
Score = 34.3 bits (77), Expect = 0.31
Identities = 34/169 (20%), Positives = 70/169 (41%), Gaps = 9/169 (5%)
Query: 98 EEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQE---TDEEDEEEEDDD 154
E++ Q +E + R + +E E RE +G QE ++E + E +
Sbjct: 91 EQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEG 150
Query: 155 DDDEGEDDGEESEETNREEEGKAKE---QIRNCENNCQQVTDKAFKEQRDRPEAQEQ--- 208
E E E E RE+EG+ +E Q+R E ++ + +++ E +EQ
Sbjct: 151 QVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQMGEQEGQMGEQEEQMGE 210
Query: 209 SEKKISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKNDPDMKE 257
E+++ K + + + K + + + +V+K + M++
Sbjct: 211 QEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRK 259
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 52.8 bits (125), Expect = 8e-07
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 75 MYWEKASR-RMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK------------E 121
M WEK + R LEE+ ++ +E+ ++E E+I ++ K Q K E
Sbjct: 338 MMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEE 397
Query: 122 KLNN--EIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKE 179
K+ E++ + E G + ++E+E +E ++ E+ E E+ RE+E K +E
Sbjct: 398 KIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIRE 457
Query: 180 QIRNCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
Q + +++ ++ K + QEQ EK
Sbjct: 458 QEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEK 489
Score = 50.4 bits (119), Expect = 4e-06
Identities = 40/194 (20%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 75 MYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRES 134
M WEK + +EE + K E ++ HE+ + R + + +EK+ + ++E+
Sbjct: 324 MMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEA 383
Query: 135 K---GSSNIQETDEEDEEEED---DDDDDEGEDDGE--ESEETNREEEGKAK---EQIRN 183
K I+E +E+ E+E+ + ++ GE + + E EE +E+E K + E+IR
Sbjct: 384 KMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIRE 443
Query: 184 CENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTDLDG 243
E ++ +K R++ E ++ E+K+ + + K + + + + +
Sbjct: 444 QEKKIREQEEKI----REQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIRE 499
Query: 244 SLRRVRKNDPDMKE 257
+++R+ + ++E
Sbjct: 500 QEKKIREQEEKIRE 513
Score = 46.6 bits (109), Expect = 6e-05
Identities = 41/209 (19%), Positives = 87/209 (41%), Gaps = 24/209 (11%)
Query: 3 EHSRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPP 62
E +EE + E+ E A + +E K + E ++ + + Q +
Sbjct: 361 EQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMM--------QEQEEK 412
Query: 63 TGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEK 122
G K WE+ +EE++ + EEK +E+ ++I ++ + + +
Sbjct: 413 MGEQEEKM------WEQEEEMQEQEEKMR----RQEEKIREQEKKIREQEEKIRE----- 457
Query: 123 LNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIR 182
E++ + E G + ++E + +E ++ E+ E E+ RE+E K +EQ
Sbjct: 458 -QEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEE 516
Query: 183 NCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
+ +++ ++ K + QEQ EK
Sbjct: 517 MMQEQEEKMWEQEEKMCEQEEKMQEQEEK 545
Score = 45.8 bits (107), Expect = 1e-04
Identities = 45/218 (20%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 10 QEELLDEEINEDEILANLSAEEL----KELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGN 65
+ E + ++N E+ L +L ++LQ+E + + + +Q +
Sbjct: 222 ESEKSEIQLNVKELKRKLERAKLLLPQQQLQAEADHLGKELQSVSAKLQAQVEENELWNR 281
Query: 66 FNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNN 125
N + + W + + EE++ + EEK +E+ E++ ++ + M + ++
Sbjct: 282 LNQQQ--EEKMWRQEEKIQEREEKIQ----EQEEKIREQEEKMRRQEEMMWEKEEKMRRQ 335
Query: 126 EIVANKRESK---------GSSNIQETDEEDEEEE---DDDDDDEGEDDGEESEETNREE 173
E + ++E K I+E +E+ +EEE + + E E EE RE+
Sbjct: 336 EEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQ 395
Query: 174 EGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
E K +EQ + +++ ++ K E QEQ EK
Sbjct: 396 EEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEK 433
Score = 33.5 bits (75), Expect = 0.53
Identities = 28/152 (18%), Positives = 73/152 (48%), Gaps = 15/152 (9%)
Query: 79 KASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSS 138
K +R LE ++ + +++ Q E + + K ++++ L+ ++ + N+ +
Sbjct: 233 KELKRKLERAKL----LLPQQQLQAEADHLGKELQSVSAKLQAQVEENELWNRLNQQQEE 288
Query: 139 NIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEE---------GKAKEQIRNCENNCQ 189
+ +E+ +E E+ + E E E+ E+ R+EE + +E + E +
Sbjct: 289 KMWRQEEKIQEREEKIQEQE-EKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIR 347
Query: 190 QVTDKAFKEQRDR-PEAQEQSEKKISKLDPKK 220
++ +K ++++ R E + Q E+KI + + ++
Sbjct: 348 ELEEKMHEQEKIREQEEKRQEEEKIREQEKRQ 379
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 52.4 bits (124), Expect = 1e-06
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 9 DQEELL---DEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGN 65
DQEE + DE + E E E K++ + E M + +K Q + T +
Sbjct: 504 DQEERMWEQDERLREKEE----RMREQKKMWQQEEKMREE--------KKTQEQEKKTWD 551
Query: 66 FNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNN 125
K + E+ + EEE + + EEK QE+ E++ ++ + M + ++
Sbjct: 552 QEEKMREEERMREREKKMREEEEMMR----EQEEKMQEQEEKMREQEEKMWEQEEKMQEQ 607
Query: 126 EIVANKRESKGSSNIQETDEEDEEE---EDDDDDDEGEDDGEESEETNREEEGKAKEQIR 182
E ++E K +E +++EE E ++ E E+ E EE RE+E K +EQ
Sbjct: 608 EEKMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEE 667
Query: 183 NCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
+ +++ ++ K Q + +EQ EK
Sbjct: 668 KMQGQEEKMREQEEKMQGQEEKMREQEEK 696
Score = 48.1 bits (113), Expect = 2e-05
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 77 WEKASRRMLEEERV--PVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRES 134
WE+ R +EER+ + EEK +EE + E+ K Q +EK+ E +RE
Sbjct: 510 WEQDERLREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQ--EEKMREEERMREREK 567
Query: 135 KGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDK 194
K +EE+ E ++ E E+ E EE E+E K +EQ E + +K
Sbjct: 568 K------MREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQ----EEKMWEQEEK 617
Query: 195 AF-KEQRDRPEAQE----QSEKKISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVR 249
+ +E+ D+ + QE + E+K+ + + K + + + + + G ++R
Sbjct: 618 MWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMR 677
Query: 250 KNDPDMK 256
+ + M+
Sbjct: 678 EQEEKMQ 684
Score = 46.6 bits (109), Expect = 6e-05
Identities = 49/248 (19%), Positives = 109/248 (43%), Gaps = 29/248 (11%)
Query: 3 EHSRNSDQEELLDEE---------INEDEILANLSAEELKELQSEMEVMAPDPSLPVGMI 53
+ + DQEE + EE + E+E + E+++E + +M
Sbjct: 545 QEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEK-------- 596
Query: 54 QKDQTDKPPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNK 113
+Q +K + M+ ++ +M E+E + + EEK QE+ E++ ++ +
Sbjct: 597 MWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEM---MWEQEEKMQEQEEKMWEQEE 653
Query: 114 NMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDD---GEESEETN 170
M + ++ E +E K ++ ++E+ + ++ G+++ G+E +
Sbjct: 654 KMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQEEKMWGQEEKMWG 713
Query: 171 REEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKV 230
+EE+ +E++R E +++ D+ K Q PE +E+ + L P K+ + S
Sbjct: 714 QEEKMWGQEEMREKE---ERIRDQKEKMQERLPEHEERCSEPC--LPPSKVLCNMSHTG- 767
Query: 231 STRPSGNQ 238
S P+G +
Sbjct: 768 SVEPAGGE 775
Score = 40.0 bits (92), Expect = 0.006
Identities = 29/134 (21%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 78 EKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGS 137
EK R +E R + EE+ QE+ E++ ++ + M + ++ E ++E +
Sbjct: 289 EKELREQEKELREQKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMR 348
Query: 138 SNIQETDEEDEE--EEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKA 195
Q+ +++E E+D+ ++ E E+ + +EE+ + +E+IR E ++ ++
Sbjct: 349 EQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMRE-EEET 407
Query: 196 FKEQRDRPEAQEQS 209
+EQ ++ + QE++
Sbjct: 408 MREQEEKMQKQEEN 421
Score = 39.3 bits (90), Expect = 0.010
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 77 WEKASRRMLEEERV--PVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRES 134
WE+ R +EER+ + EEK QEE E I +R K M + + E K+E
Sbjct: 362 WEQDERLREKEERMREQEKMWEQEEKMQEE-ERIREREKKMREEEETMREQEEKMQKQEE 420
Query: 135 KGSSNIQETDEEDEEEEDDDDDDEG---EDDGEESEETNREEEGKAKEQIRNCENNCQQV 191
N+ E +E++ +++ + E ++ +E EE E+E K ++Q +
Sbjct: 421 ----NMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMW 476
Query: 192 TDKAFKEQRDRPEAQEQ 208
+ +EQ D+ QE+
Sbjct: 477 RQEKMREQEDQMWEQEE 493
Score = 38.9 bits (89), Expect = 0.013
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 10 QEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGNFNHK 69
QE+L E + EI L+ +ELK + + P + +Q++ + K
Sbjct: 193 QEKLRLAESEKSEI--QLNVKELKRKLERAKFLLPQ--VQTNTLQEEMWRQEEELREQEK 248
Query: 70 SLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKE--KLNNEI 127
+ ++ + +EER+ + E K +E+ E++ ++ K + + KE + E+
Sbjct: 249 KIR-----KQEEKMWRQEERLR----EQEGKMREQEEKMRRQEKRLREQEKELREQEKEL 299
Query: 128 VANKRESKGSSNIQETDEEDEEEEDDDDDDE-----GEDDGEESEETNREEEGKAKEQIR 182
K+ + +QE +E+ E+E+ + E E+ E E+ RE+E K ++Q
Sbjct: 300 REQKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEE 359
Query: 183 NCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
+++ +K + R++ + EQ EK
Sbjct: 360 RMWEQDERLREKE-ERMREQEKMWEQEEK 387
Score = 38.5 bits (88), Expect = 0.016
Identities = 29/137 (21%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 78 EKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGS 137
EK R +E R ++ ++K +E+ E+++++ + M + +EK+ + R+ +
Sbjct: 282 EKRLREQEKELREQEKELREQKKLREQEEQMQEQEEKMWEQ-EEKMREQEEKMWRQEERL 340
Query: 138 SNIQETDEEDEEEEDDDDDDEGEDDGE--ESEETNREEEGKAKEQIRNCENNCQQVTDKA 195
++ E E++ D ++ E D E EE RE+E +++ + E + +K
Sbjct: 341 WEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQEEKMQEEERIREREKK 400
Query: 196 FKEQRDRPEAQEQSEKK 212
+E+ + QE+ +K
Sbjct: 401 MREEEETMREQEEKMQK 417
Score = 37.7 bits (86), Expect = 0.028
Identities = 23/140 (16%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 77 WEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKG 136
WE+ + +EE++ + EE+ E+ +++ ++ + M + + ++E +
Sbjct: 320 WEQEEKMREQEEKM----WRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERM 375
Query: 137 SSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAF 196
+ ++E++ +E++ + + EE E +EE K++ E ++ +
Sbjct: 376 REQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRL 435
Query: 197 KEQRDRPEAQEQSEKKISKL 216
EQ+++ QE+ +++ K+
Sbjct: 436 PEQKEKLWEQEKMQEQEEKI 455
Score = 37.4 bits (85), Expect = 0.037
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 38/221 (17%)
Query: 1 MSEHSRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDK 60
M E + +QEE + EE E K+++ E E M ++Q +K
Sbjct: 375 MREQEKMWEQEEKMQEE--------ERIREREKKMREEEETM------------REQEEK 414
Query: 61 PPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK 120
N WE+ + +++R+P + +EK E+ + E+ K Q K
Sbjct: 415 MQKQEEN--------MWEQEEKEW-QQQRLP----EQKEKLWEQEKMQEQEEKIWEQEEK 461
Query: 121 EKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDE-----GEDDGEESEETNREEEG 175
+ E+ +++ ++E +++ E+E+ D E E+ E +E RE+E
Sbjct: 462 IRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKEE 521
Query: 176 KAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKL 216
+ +EQ + + + +K +EQ + QE+ ++ ++
Sbjct: 522 RMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERM 562
Score = 35.8 bits (81), Expect = 0.11
Identities = 26/131 (19%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 96 KSEEKTQEEHEEIEKRNKNM---AQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEED 152
+ EE+ +E+ ++I K+ + M + L+E+ ++ + ++E ++E E+E
Sbjct: 238 RQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEK 297
Query: 153 DDDDD----EGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQ 208
+ + E E+ +E EE E+E K +EQ +++ ++ K+ R++ +
Sbjct: 298 ELREQKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQE-KQMREQEQKMRD 356
Query: 209 SEKKISKLDPK 219
E+++ + D +
Sbjct: 357 QEERMWEQDER 367
Score = 35.0 bits (79), Expect = 0.18
Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 77 WEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK-----EKLNNEIVANK 131
WE+ + +E+++ EE+ E+ E + ++ + M + K EK+ E +
Sbjct: 341 WEQEKQMREQEQKMR----DQEERMWEQDERLREKEERMREQEKMWEQEEKMQEEERIRE 396
Query: 132 RESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQV 191
RE K ++E +E E+E+ E +E +E ++ + KE++ E Q
Sbjct: 397 REKK----MREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKL--WEQEKMQE 450
Query: 192 TDKAFKEQRDRPEAQEQ---SEKKI 213
++ EQ ++ QE+ EKK+
Sbjct: 451 QEEKIWEQEEKIRDQEEMWGQEKKM 475
Score = 35.0 bits (79), Expect = 0.18
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 29/147 (19%)
Query: 77 WEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKG 136
WE+ + +E+++ EE+ E+ E + ++ + M + K E RE K
Sbjct: 489 WEQEEKMRDQEQKM----WDQEERMWEQDERLREKEERMREQKKMWQQEE---KMREEK- 540
Query: 137 SSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAF 196
+T E++++ D ++ E+ E E+ REEE +EQ ++
Sbjct: 541 -----KTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQ------------EEKM 583
Query: 197 KEQRDRPEAQE----QSEKKISKLDPK 219
+EQ ++ QE + E+K+ + + K
Sbjct: 584 QEQEEKMREQEEKMWEQEEKMQEQEEK 610
Score = 34.3 bits (77), Expect = 0.31
Identities = 44/218 (20%), Positives = 87/218 (39%), Gaps = 14/218 (6%)
Query: 3 EHSRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPP 62
E ++E + ++E + N+ +E KE Q + P+ + +K Q +
Sbjct: 398 EKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQR---LPEQKEKLWEQEKMQEQEEK 454
Query: 63 TGNFNHKSLVDYMYW--EKASRRMLEEERVPVTFVKSEEKTQEEHEEI---EKRNKNMAQ 117
K W EK R + + EEK +++ +++ E+R +
Sbjct: 455 IWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEERMWEQDE 514
Query: 118 YLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDE----GEDDGEESEETNREE 173
L+EK E + +++ +++ +E+E D E E+ E E+ REE
Sbjct: 515 RLREK--EERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKMREE 572
Query: 174 EGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEK 211
E +EQ + +++ ++ K + QEQ EK
Sbjct: 573 EEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEK 610
Score = 33.5 bits (75), Expect = 0.53
Identities = 25/132 (18%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 77 WEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKG 136
W + R +E+++ + E+K +++ E + ++++ + + +E++ + ++E K
Sbjct: 334 WRQEERLWEQEKQMR----EQEQKMRDQEERMWEQDERLREK-EERMREQEKMWEQEEKM 388
Query: 137 SSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAF 196
+ + E + E+++ E E+ ++ EE E+E K +Q R E + +
Sbjct: 389 QEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKM 448
Query: 197 KEQRDRPEAQEQ 208
+EQ ++ QE+
Sbjct: 449 QEQEEKIWEQEE 460
Score = 33.1 bits (74), Expect = 0.69
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 95 VKSEEKTQEEHE------------------EIEKRNKNMAQYLKEKLNNEIVANKRESKG 136
++ +E+ E E E EK+ + Q ++++ ++R +
Sbjct: 312 MQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREK 371
Query: 137 SSNIQETD---EEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTD 193
++E + E++E+ ++++ E E E EET RE+E K ++Q E N + +
Sbjct: 372 EERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQ----EENMWEQEE 427
Query: 194 KAFKEQR---------DRPEAQEQSEK 211
K +++QR ++ + QEQ EK
Sbjct: 428 KEWQQQRLPEQKEKLWEQEKMQEQEEK 454
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 52.0 bits (123), Expect = 1e-06
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 96 KSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDD 155
+ +E ++ E+ + K K ++V K ++ +E D+EDE+++DD+D
Sbjct: 193 EDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDED 252
Query: 156 DDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISK 215
D++ +D+ +E EE EEE ++ K KE + A E ++K+
Sbjct: 253 DEDDDDEDDEEEEEEEEEE------------PVKEAPGKRKKEMAKQKAAPEAKKQKVEG 300
Query: 216 LDP 218
+P
Sbjct: 301 TEP 303
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 96 KSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDD 155
K E+ +EE ++ E+ ++ +++ E A K + ++ E DE+DE++EDDDD
Sbjct: 141 KKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDD 200
Query: 156 DDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRDRPEAQEQSE 210
D+E +D EE+ ET K K+ + + V + +E+ D E + E
Sbjct: 201 DEE-DDSEEEAMETT---PAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDE 251
Score = 45.8 bits (107), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%)
Query: 134 SKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTD 193
+KG+ N + +ED +EE+DDD +E E+D E+ +E E E A + + + +
Sbjct: 131 AKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDE 190
Query: 194 KAFKEQRDRPEAQEQSEKKISKLDPKK 220
++ D + ++ SE++ + P K
Sbjct: 191 DDEDDEDDDDDEEDDSEEEAMETTPAK 217
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 131 KRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGE----ESEETNREEEGKAKEQIRNCEN 186
K K S+ +E D+ +E+EEDD+D+DE ED+ E ++ E + E + E+
Sbjct: 138 KNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDED 197
Query: 187 NCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLALD 224
+ D + +E + A+ + K+ + K +A D
Sbjct: 198 DDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAED 235
Score = 37.7 bits (86), Expect = 0.028
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 130 NKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQ 189
N + +K + +E D++ EE+E+DD+D++ ++D E A E + E++
Sbjct: 136 NGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASED-EDDEDDED 194
Query: 190 QVTDKAFKEQRDRPEAQEQSE---KKISKLDPKK 220
D +E EA E + KK +K+ P K
Sbjct: 195 DEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVK 228
>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 52.0 bits (123), Expect = 1e-06
Identities = 55/279 (19%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 73 DYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKR 132
D + E S++ +EE+ P K +E+ Q+E ++ K +K + V +KR
Sbjct: 209 DIITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRKEPD-------KKEGKKEVESKR 261
Query: 133 ESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVT 192
++ + + T D EEE DD + E + G + +T + + + ++
Sbjct: 262 KNLAKTGVTSTS--DSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQHEKEAADRKRKQE 319
Query: 193 DKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVR--- 249
++ EQ+++ E ++ KK+ K +T +D L+R+
Sbjct: 320 EQMETEQQNKDEGKKPEVKKVEK--------------------KRETSMDSRLQRIHAEI 359
Query: 250 KNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAFALANMLREN 309
KN + L++N E+ V + KH + + + F ++ ++ E
Sbjct: 360 KNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLK----KIRRFKVSQVIMEK 415
Query: 310 RSITTLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQ 348
++ ++ F+ G+G I + L N++L E R H +
Sbjct: 416 STMLYNKFKNMFLVGEGDSVITQVL--NKSLAEQRQHEE 452
>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 52.0 bits (123), Expect = 1e-06
Identities = 55/279 (19%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 73 DYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKR 132
D + E S++ +EE+ P K +E+ Q+E ++ K +K + V +KR
Sbjct: 209 DIITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRKEPD-------KKEGKKEVESKR 261
Query: 133 ESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVT 192
++ + + T D EEE DD + E + G + +T + + + ++
Sbjct: 262 KNLAKTGVTSTS--DSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQHEKEAADRKRKQE 319
Query: 193 DKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVR--- 249
++ EQ+++ E ++ KK+ K +T +D L+R+
Sbjct: 320 EQMETEQQNKDEGKKPEVKKVEK--------------------KRETSMDSRLQRIHAEI 359
Query: 250 KNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAFALANMLREN 309
KN + L++N E+ V + KH + + + F ++ ++ E
Sbjct: 360 KNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLK----KIRRFKVSQVIMEK 415
Query: 310 RSITTLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQ 348
++ ++ F+ G+G I + L N++L E R H +
Sbjct: 416 STMLYNKFKNMFLVGEGDSVITQVL--NKSLAEQRQHEE 452
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 52.0 bits (123), Expect = 1e-06
Identities = 31/127 (24%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Query: 78 EKASRRMLEE----ERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRE 133
EK + R++E+ E+ + + +++ +++ +NK YL + + + +
Sbjct: 1005 EKEAERLMEQASCWEKEEQEILSTRANSRQSPAKVQSKNK----YLHSPESRPVTGERGQ 1060
Query: 134 SKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTD 193
S +E+ EE+EEEED+++++E E++ E+ EE EEE + +E I++ +
Sbjct: 1061 LLELS--KESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQS 1118
Query: 194 KAFKEQR 200
A K +R
Sbjct: 1119 VAIKRKR 1125
Score = 50.1 bits (118), Expect = 5e-06
Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 28/199 (14%)
Query: 95 VKSEEKTQEEHEEIEKRNKNMAQ---------------YLKEKLNNEIVANKRESKGSSN 139
+K EE+ +EE EE E+ + + +EK EI K +S +
Sbjct: 1348 IKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEISTEKEDSARLDD 1407
Query: 140 IQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQ 199
+E +EEDEE ++D D ++D E E+E +E + N + D +
Sbjct: 1408 HEEEEEEDEEPSHNEDHDADDEDDSHMESAEVEKEELPRESFKEVLENQETFLDLNVQPG 1467
Query: 200 RDRPEAQEQSEKKIS---KLDPKKLALDTSFLKVSTR--PSGNQTDLDGSLRRVRKNDPD 254
PE ++ +PK+LA D + S P G Q +++ +
Sbjct: 1468 HSNPEVLMDCGVDLTASCNSEPKELAGDPEAVPESDEEPPPGEQAQ--------KQDQKN 1519
Query: 255 MKELNLNNIENIPKEMLLD 273
KE++ E P M +D
Sbjct: 1520 SKEVDTEFKEGNPATMEID 1538
Score = 42.4 bits (98), Expect = 0.001
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 84 MLEEERVPVTFVK--SEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQ 141
M +E+V V K SE KT IE+ K + L + N +RE +
Sbjct: 1281 MEPDEQVTVEEQKETSEGKTSPSPIRIEEEVKETGEALLPQEEN-----RREETCAPVSP 1335
Query: 142 ETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFKEQRD 201
T ++ E+D +E E++ EE EE EEEG+ +E N E + D A ++++
Sbjct: 1336 NTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKD----PDGAKSQEKE 1391
Query: 202 RPEAQEQSE 210
PE + E
Sbjct: 1392 EPEISTEKE 1400
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 51.6 bits (122), Expect = 2e-06
Identities = 35/144 (24%), Positives = 74/144 (51%), Gaps = 19/144 (13%)
Query: 77 WEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKG 136
WE+ + +E+++ EE+ E+ E + ++ + M + +EK+ ++ + E K
Sbjct: 379 WEQEKQMREQEQKMR----DQEERMWEQDERLREKEERMRE--QEKMWEQVEKMREEKKM 432
Query: 137 SSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAF 196
++T +++E+ ++++ E E E EET RE+E K ++Q E N + +K +
Sbjct: 433 QEQEKKTRDQEEKMQEEERIREREKKMREEEETMREQEEKMQKQ----EENMWEQEEKEW 488
Query: 197 KEQR---------DRPEAQEQSEK 211
++QR ++ + QEQ EK
Sbjct: 489 QQQRLPEQKEKLWEQEKMQEQEEK 512
Score = 43.1 bits (100), Expect = 7e-04
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 77 WEKASRRMLEEERVPVTFVKSEEKTQE------EHEEIEKRNKNMAQYLKEKLNNEIVAN 130
WE+ + +E+++ + E+KTQE + EE + + M + K+ E +
Sbjct: 547 WEQEEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMR 606
Query: 131 KRESKGSSNIQETDEEDEEE-EDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCE---- 185
++E K ++ E++E+ E ++ E E+ E EE E+E K EQ R E
Sbjct: 607 EQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQKEK 666
Query: 186 --NNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPK 219
+ + + +EQ ++ QE+ EKK + + K
Sbjct: 667 LWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKK 702
Score = 42.0 bits (97), Expect = 0.001
Identities = 34/174 (19%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 86 EEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGSSNIQETDE 145
+EER+ + E K +E+ E++ ++ K + + KE E +++ Q ++
Sbjct: 298 QEERLR----EQEGKMREQEEKMWRQEKRLREQEKELREQEKELREQKELREQEEQMQEQ 353
Query: 146 EDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQV--TDKAFKEQRDRP 203
E++ E ++ E E+ EE E+E + +EQ + + +++ D+ +E+ +R
Sbjct: 354 EEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERM 413
Query: 204 EAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTDLDGSLRRVRKNDPDMKE 257
QE+ +++ K+ +K ++ + + +Q + R+R+ + M+E
Sbjct: 414 REQEKMWEQVEKMREEKK------MQEQEKKTRDQEEKMQEEERIREREKKMRE 461
Score = 42.0 bits (97), Expect = 0.001
Identities = 45/217 (20%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 9 DQEELLDEEINEDEILANLSAEELKE---LQSEMEVMAPDPSLPVGMIQKDQTDKPPTGN 65
DQEE ++++ E E E+++E ++ + M + + +K Q +
Sbjct: 562 DQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMQE 621
Query: 66 FNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK----E 121
K WE+ + +EE++ + EEK E+ E++ ++ + Q K E
Sbjct: 622 QEEKM------WEQEEKMQEQEEKM----WEQEEKMWEQEEKMWEQQRLPEQKEKLWEHE 671
Query: 122 KLNNEIVANKRESK--GSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKE 179
K+ + ++E K +++ +E E++ D + E+ E E+ REEE E
Sbjct: 672 KMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMREREKKMREEE----E 727
Query: 180 QIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKL 216
+R E Q+ +K +++ + E +E+ ++ K+
Sbjct: 728 MMREQEEKMQEQEEKMQEQEEEMWEQEEKMWEQEEKM 764
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/222 (20%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 3 EHSRNSDQEELLDEE--INEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDK 60
+ + DQEE + EE I E E E ++E + +M+ + M ++++ +
Sbjct: 435 QEKKTRDQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEEN------MWEQEEKEW 488
Query: 61 PPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK 120
K + WE+ + EE+ + +E+ + EE+ + K M + K
Sbjct: 489 QQQRLPEQKEKL----WEQEKMQEQEEK------IWEQEEKIRDQEEMWGQEKKMWRQEK 538
Query: 121 EKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEE---SEETNREEEGKA 177
+ + + + E + D+E+ E+ + ++ D EE EE RE E K
Sbjct: 539 MREQEDQMWEQEEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKM 598
Query: 178 KEQ---IRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKL 216
+E+ +R E Q+ +K +++ E +E+ +++ K+
Sbjct: 599 REEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKM 640
Score = 39.3 bits (90), Expect = 0.010
Identities = 40/218 (18%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 5 SRNSDQEELLDEEINEDEILA------NLSAEELKELQSEMEVMAPDPSLPVGMIQKDQT 58
+R+ + ++E E + L+ ++ EELK+ +E++ LP+ +K +
Sbjct: 190 TRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQ-----EKLPLAESEKSEI 244
Query: 59 DKPPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQY 118
N K L + K ++ + + EE+ +E+ ++I K+ + M +
Sbjct: 245 Q------LNVKELKRKLERAKFLLPQVQTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQ 298
Query: 119 LKEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAK 178
+ E ++E K + E+++E + + + + + E EE +E+E K
Sbjct: 299 EERLREQEGKMREQEEKMWRQEKRLREQEKELREQEKELREQKELREQEEQMQEQEEKMW 358
Query: 179 EQIRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKL 216
EQ E ++ +K ++++ E ++Q ++ K+
Sbjct: 359 EQ----EEKMREQEEKMWRQEERLWEQEKQMREQEQKM 392
Score = 39.3 bits (90), Expect = 0.010
Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 79 KASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESK--- 135
+ +R+ E+E+ ++ +EK E +E+ ++ + M + ++ E ++E K
Sbjct: 318 RQEKRLREQEKE----LREQEKELREQKELREQEEQMQEQEEKMWEQEEKMREQEEKMWR 373
Query: 136 GSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKA 195
+ E +++ E+E D E + E +E RE+E + +EQ + E + +K
Sbjct: 374 QEERLWEQEKQMREQEQKMRDQE--ERMWEQDERLREKEERMREQEKMWEQVEKMREEKK 431
Query: 196 FKEQRDRPEAQE---QSEKKISKLDPK 219
+EQ + QE Q E++I + + K
Sbjct: 432 MQEQEKKTRDQEEKMQEEERIREREKK 458
Score = 38.9 bits (89), Expect = 0.013
Identities = 42/216 (19%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 9 DQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDKPPTGNFNH 68
+QEE + E+ E L E + Q +M+ M +K Q + T ++
Sbjct: 649 EQEEKMWEQQRLPEQKEKLWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKT--WDQ 706
Query: 69 KSLVDYMYWEKASRRMLEEERV----PVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLN 124
+ + + + ++M EEE + + EEK QE+ EE+ ++ + M + ++
Sbjct: 707 EKMREEESMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEEMWEQEEKMWEQEEKMWE 766
Query: 125 NEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQ-IRN 183
+ + ++E + E+ E+E+ D E + G+E + +EE+ + +E+ +
Sbjct: 767 QQRLPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKMRGQEEKMRGQEEKMRGQEEKMWG 826
Query: 184 CENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPK 219
E +K + ++ +E+ E+K+ + K
Sbjct: 827 QEEKMWGQEEKMWGQEEKMWGQEEKMEEKMQGQEEK 862
Score = 37.4 bits (85), Expect = 0.037
Identities = 44/216 (20%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 7 NSDQEELL--DEEINEDEILANLSAEEL---KELQSEMEVMAPDPSLPVGMIQKDQTDKP 61
N+ QEE+ +EE+ E E E++ +E E E + + +K ++
Sbjct: 268 NTLQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMWRQEKRLREQE 327
Query: 62 PTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKE 121
K L + + +M E+E + EEK +E+ E++ ++ + + + K+
Sbjct: 328 KELREQEKELREQKELREQEEQMQEQEE---KMWEQEEKMREQEEKMWRQEERLWEQEKQ 384
Query: 122 KLNNEIVANKRESK---GSSNIQETDEEDEEEE---DDDDDDEGEDDGEESEETNREEEG 175
E +E + ++E +E E+E + + E +E E+ R++E
Sbjct: 385 MREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEE 444
Query: 176 KAKEQ--IRNCENNCQQVTDKAFKEQRDRPEAQEQS 209
K +E+ IR E ++ ++ +EQ ++ + QE++
Sbjct: 445 KMQEEERIREREKKMRE-EEETMREQEEKMQKQEEN 479
Score = 37.0 bits (84), Expect = 0.048
Identities = 28/139 (20%), Positives = 63/139 (45%), Gaps = 6/139 (4%)
Query: 78 EKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLNNEIVANKRESKGS 137
EK R +E R + EE+ QE+ E++ ++ + M + E + + E
Sbjct: 327 EKELREQEKELREQKELREQEEQMQEQEEKMWEQEEKMRE------QEEKMWRQEERLWE 380
Query: 138 SNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIRNCENNCQQVTDKAFK 197
Q ++E + + ++ E ++ E EE RE+E ++ + E Q +K +
Sbjct: 381 QEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTR 440
Query: 198 EQRDRPEAQEQSEKKISKL 216
+Q ++ + +E+ ++ K+
Sbjct: 441 DQEEKMQEEERIREREKKM 459
Score = 36.6 bits (83), Expect = 0.063
Identities = 37/209 (17%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 1 MSEHSRNSDQEELLDEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTDK 60
M + ++ +++ E++ E+E + E K+++ E E+M +K Q +
Sbjct: 692 MEKKTQEQEKKTWDQEKMREEESMR----EREKKMREEEEMMREQEEKMQEQEEKMQEQE 747
Query: 61 PPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKS-EEKTQEEHEEIEKRNKNMAQYL 119
K WE+ +M E++R+P K E + +E E+I ++ + M
Sbjct: 748 EEMWEQEEKM------WEQ-EEKMWEQQRLPEQKEKLWEHEKMQEQEKIWEQEEKMRDQE 800
Query: 120 KEKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKE 179
++ E +E K ++ ++E+ ++ G+++ +E EE+ + +E
Sbjct: 801 EKMRGQEEKMRGQEEKMRGQEEKMWGQEEKMWGQEEKMWGQEEKMWGQEEKMEEKMQGQE 860
Query: 180 QIRNCENNCQQVTDKAFKEQRDRPEAQEQ 208
+ + + ++ +EQ ++ QE+
Sbjct: 861 EKMREQEEKMRGQEEKMREQEEKMRGQEE 889
Score = 35.0 bits (79), Expect = 0.18
Identities = 55/254 (21%), Positives = 99/254 (38%), Gaps = 53/254 (20%)
Query: 3 EHSRNSDQEELL---DEEINEDEILANLSAEELKELQSEMEVMAPDPSLPVGMIQKDQTD 59
+ + DQEE + DE + E E E +++ ++E M + +K Q
Sbjct: 388 QEQKMRDQEERMWEQDERLREKEE----RMREQEKMWEQVEKMREE--------KKMQEQ 435
Query: 60 KPPTGNFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEI-EKRNKNMAQY 118
+ T + K + E+ + EEE T + EEK Q++ E + E+ K Q
Sbjct: 436 EKKTRDQEEKMQEEERIREREKKMREEEE----TMREQEEKMQKQEENMWEQEEKEWQQQ 491
Query: 119 L----KEKL---------------NNEIVANKRESKGSSNIQETDEEDEEEEDD------ 153
KEKL E + ++ E G E+ E+ED
Sbjct: 492 RLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEE 551
Query: 154 ---DDDDEGEDDGEESEETNREEEGKAKEQIRNC-ENNCQQVTDKAFKEQ----RDRPEA 205
D + + D E E+ +E+E K +Q E + +K +E+ R++ E
Sbjct: 552 KMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEK 611
Query: 206 QEQSEKKISKLDPK 219
++ E+K+ + + K
Sbjct: 612 MQEQEEKMQEQEEK 625
Score = 30.8 bits (68), Expect = 3.4
Identities = 37/184 (20%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 9 DQEELL---DEEINEDEILANLSAEELKELQSEM----EVMAPDPSLPVGMIQKDQTDKP 61
++EE++ +E++ E E EE+ E + +M E M LP QK++
Sbjct: 724 EEEEMMREQEEKMQEQEEKMQEQEEEMWEQEEKMWEQEEKMWEQQRLPE---QKEKL--- 777
Query: 62 PTGNFNHKSLVDY-MYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLK 120
+ H+ + + WE+ + +EE++ EEK + + E++ + + M +
Sbjct: 778 ----WEHEKMQEQEKIWEQEEKMRDQEEKMR----GQEEKMRGQEEKMRGQEEKMWGQEE 829
Query: 121 EKLNNEIVANKRESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQ 180
+ E +E K ++ +E+ + +E+ + E + G+E + +EE+ + +E+
Sbjct: 830 KMWGQEEKMWGQEEKMWGQEEKMEEKMQGQEEKMREQEEKMRGQEEKMREQEEKMRGQEE 889
Query: 181 IRNC 184
C
Sbjct: 890 KIYC 893
Score = 29.3 bits (64), Expect = 10.0
Identities = 21/109 (19%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 396 KQRQKRQEEQKQQQLKEQKKLIAMLENGLGLPPGMWELLGGPKPDSRMQEFFQPPPPRPP 455
++++++ EQ+++ ++++K+ E MWE P+ ++ E +
Sbjct: 620 QEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQEKM 679
Query: 456 NPQNVPFSQRSEMMKKPSQAPKYRTDPDSFRVVKLKRIQRKSRMPEARE 504
Q ++ +M KK + K D + R + R +R+ +M E E
Sbjct: 680 QEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMR-EREKKMREEEE 727
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,673,442
Number of Sequences: 37866
Number of extensions: 1400004
Number of successful extensions: 35099
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 938
Number of HSP's that attempted gapping in prelim test: 12678
Number of HSP's gapped (non-prelim): 10889
length of query: 560
length of database: 18,247,518
effective HSP length: 107
effective length of query: 453
effective length of database: 14,195,856
effective search space: 6430722768
effective search space used: 6430722768
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.