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Search of human proteins with 5454132
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo
sapiens]
(790 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo ... 1671 0.0
gi|118026942 zinc finger protein Cezanne [Homo sapiens] 184 3e-46
gi|18702331 OTU domain containing 7A [Homo sapiens] 172 1e-42
gi|110815809 zinc finger, RAN-binding domain containing 1 protei... 129 1e-29
gi|36029914 valosin containing protein (p97)/p47 complex interac... 58 4e-08
gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens] 39 0.025
gi|134244285 Notch homolog 3 [Homo sapiens] 35 0.21
gi|239753405 PREDICTED: hypothetical protein [Homo sapiens] 35 0.21
gi|239747975 PREDICTED: hypothetical protein XP_002346485 [Homo ... 35 0.21
gi|239741872 PREDICTED: hypothetical protein XP_002342329 [Homo ... 35 0.21
gi|156231049 zinc finger, AN1-type domain 5 [Homo sapiens] 35 0.27
gi|156231047 zinc finger, AN1-type domain 5 [Homo sapiens] 35 0.27
gi|5174755 zinc finger, AN1-type domain 5 [Homo sapiens] 35 0.27
gi|239754979 PREDICTED: hypothetical protein [Homo sapiens] 34 0.46
gi|7705495 zinc finger protein 581 [Homo sapiens] 34 0.60
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 33 0.79
gi|209969757 early growth response 2 protein isoform b [Homo sap... 33 1.0
gi|209969755 early growth response 2 protein isoform a [Homo sap... 33 1.0
gi|209969753 early growth response 2 protein isoform a [Homo sap... 33 1.0
gi|9845524 early growth response 2 protein isoform a [Homo sapiens] 33 1.0
gi|239756611 PREDICTED: hypothetical protein [Homo sapiens] 33 1.0
gi|239751099 PREDICTED: hypothetical protein XP_002347699 [Homo ... 33 1.0
gi|239745586 PREDICTED: hypothetical protein XP_002344136 [Homo ... 33 1.0
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 33 1.3
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 33 1.3
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 33 1.3
gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens] 33 1.3
gi|223890259 midline 2 isoform 2 [Homo sapiens] 32 1.8
gi|223890257 midline 2 isoform 1 [Homo sapiens] 32 1.8
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens] 32 1.8
>gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo
sapiens]
Length = 790
Score = 1671 bits (4328), Expect = 0.0
Identities = 790/790 (100%), Positives = 790/790 (100%)
Query: 1 MAEQVLPQALYLSNMRKAVKIRERTPEDIFKPTNGIIHHFKTMHRYTLEMFRTCQFCPQF 60
MAEQVLPQALYLSNMRKAVKIRERTPEDIFKPTNGIIHHFKTMHRYTLEMFRTCQFCPQF
Sbjct: 1 MAEQVLPQALYLSNMRKAVKIRERTPEDIFKPTNGIIHHFKTMHRYTLEMFRTCQFCPQF 60
Query: 61 REIIHKALIDRNIQATLESQKKLNWCREVRKLVALKTNGDGNCLMHATSQYMWGVQDTDL 120
REIIHKALIDRNIQATLESQKKLNWCREVRKLVALKTNGDGNCLMHATSQYMWGVQDTDL
Sbjct: 61 REIIHKALIDRNIQATLESQKKLNWCREVRKLVALKTNGDGNCLMHATSQYMWGVQDTDL 120
Query: 121 VLRKALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLIKMASTDTP 180
VLRKALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLIKMASTDTP
Sbjct: 121 VLRKALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLIKMASTDTP 180
Query: 181 MARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPA 240
MARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPA
Sbjct: 181 MARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPA 240
Query: 241 QECYRYPIVLGYDSHHFVPLVTLKDSGPEIRAVPLVNRDRGRFEDLKVHFLTDPENEMKE 300
QECYRYPIVLGYDSHHFVPLVTLKDSGPEIRAVPLVNRDRGRFEDLKVHFLTDPENEMKE
Sbjct: 241 QECYRYPIVLGYDSHHFVPLVTLKDSGPEIRAVPLVNRDRGRFEDLKVHFLTDPENEMKE 300
Query: 301 KLLKEYLMVIEIPVQGWDHGTTHLINAAKLDEANLPKEINLVDDYFELVQHEYKKWQENS 360
KLLKEYLMVIEIPVQGWDHGTTHLINAAKLDEANLPKEINLVDDYFELVQHEYKKWQENS
Sbjct: 301 KLLKEYLMVIEIPVQGWDHGTTHLINAAKLDEANLPKEINLVDDYFELVQHEYKKWQENS 360
Query: 361 EQGRREGHAQNPMEPSVPQLSLMDVKCETPNCPFFMSVNTQPLCHECSERRQKNQNKLPK 420
EQGRREGHAQNPMEPSVPQLSLMDVKCETPNCPFFMSVNTQPLCHECSERRQKNQNKLPK
Sbjct: 361 EQGRREGHAQNPMEPSVPQLSLMDVKCETPNCPFFMSVNTQPLCHECSERRQKNQNKLPK 420
Query: 421 LNSKPGPEGLPGMALGASRGEAYEPLAWNPEESTGGPHSAPPTAPSPFLFSETTAMKCRS 480
LNSKPGPEGLPGMALGASRGEAYEPLAWNPEESTGGPHSAPPTAPSPFLFSETTAMKCRS
Sbjct: 421 LNSKPGPEGLPGMALGASRGEAYEPLAWNPEESTGGPHSAPPTAPSPFLFSETTAMKCRS 480
Query: 481 PGCPFTLNVQHNGFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTRTFNGICSTCF 540
PGCPFTLNVQHNGFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTRTFNGICSTCF
Sbjct: 481 PGCPFTLNVQHNGFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTRTFNGICSTCF 540
Query: 541 KRTTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGCLSQAARTPGD 600
KRTTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGCLSQAARTPGD
Sbjct: 541 KRTTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGCLSQAARTPGD 600
Query: 601 RTGTSKCRKAGCVYFGTPENKGFCTLCFIEYRENKHFAAASGKVSPTASRFQNTIPCLGR 660
RTGTSKCRKAGCVYFGTPENKGFCTLCFIEYRENKHFAAASGKVSPTASRFQNTIPCLGR
Sbjct: 601 RTGTSKCRKAGCVYFGTPENKGFCTLCFIEYRENKHFAAASGKVSPTASRFQNTIPCLGR 660
Query: 661 ECGTLGSTMFEGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTTQSTSRPKCARAS 720
ECGTLGSTMFEGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTTQSTSRPKCARAS
Sbjct: 661 ECGTLGSTMFEGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTTQSTSRPKCARAS 720
Query: 721 CKNILACRSEELCMECQHPNQRMGPGAHRGEPAPEDPPKQRCRAPACDHFGNAKCNGYCN 780
CKNILACRSEELCMECQHPNQRMGPGAHRGEPAPEDPPKQRCRAPACDHFGNAKCNGYCN
Sbjct: 721 CKNILACRSEELCMECQHPNQRMGPGAHRGEPAPEDPPKQRCRAPACDHFGNAKCNGYCN 780
Query: 781 ECFQFKQMYG 790
ECFQFKQMYG
Sbjct: 781 ECFQFKQMYG 790
>gi|118026942 zinc finger protein Cezanne [Homo sapiens]
Length = 843
Score = 184 bits (467), Expect = 3e-46
Identities = 105/257 (40%), Positives = 153/257 (59%), Gaps = 30/257 (11%)
Query: 60 FREIIHKALIDRNIQATLESQKKLNWCREV----RKLVALKTNGDGNCLMHATSQYMWGV 115
FR I + LI++++ LE +LNW V ++L+ L T GDGNCL+HA S MWG
Sbjct: 147 FRSFIERDLIEQSMLVALEQAGRLNWWVSVDPTSQRLLPLATTGDGNCLLHAASLGMWGF 206
Query: 116 QDTDLVLRKALFSTLK---ETDTRNFKFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLI 172
D DL+LRKAL++ ++ E + ++RWQ ++Q+ E+GL Y W EW+ LI
Sbjct: 207 HDRDLMLRKALYALMEKGVEKEALKRRWRWQ----QTQQNKESGLVYTEDEWQKEWNELI 262
Query: 173 KMASTDTPMARS-------GLQ------YNSLEEIHIFVLCNILRRPIIVISDKMLRSLE 219
K+AS++ M G++ Y SLEE H+FVL ++LRRPI+V++D MLR
Sbjct: 263 KLASSEPRMHLGTNGANCGGVESSEEPVYESLEEFHVFVLAHVLRRPIVVVADTMLRD-S 321
Query: 220 SGSNFAPLKVGGIYLPLHWPAQECYRYPIVLGYDSHHFVPLVTL--KDSGPEIRAVPLVN 277
G FAP+ GGIYLPL PA +C+R P+VL YD HF LV++ K++ E +PL +
Sbjct: 322 GGEAFAPIPFGGIYLPLEVPASQCHRSPLVLAYDQAHFSALVSMEQKENTKEQAVIPLTD 381
Query: 278 RDRGRFEDLKVHFLTDP 294
+ ++ L +HF DP
Sbjct: 382 SE---YKLLPLHFAVDP 395
Score = 34.7 bits (78), Expect = 0.35
Identities = 29/114 (25%), Positives = 39/114 (34%), Gaps = 28/114 (24%)
Query: 410 RRQKNQNKLPKLNSKPGPEGLPGMALGA------------SRGEAYEPLAWNPEESTGGP 457
R +Q+ +P L +PG G+ GA S G P P+ GG
Sbjct: 738 RPYPHQDSIPSL--EPGSHSKDGLHRGALLPPPYRVADSYSNGYREPP---EPDGWAGGL 792
Query: 458 HSAPPTAPSPFLFSETTAMKCRSPGCPFTLNVQHNGFCERCHNARQLHASHAPD 511
PPT KC+ P C F + + N FC C+ PD
Sbjct: 793 RGLPPTQT-----------KCKQPNCSFYGHPETNNFCSCCYREELRRREREPD 835
Score = 33.5 bits (75), Expect = 0.79
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 605 SKCRKAGCVYFGTPENKGFCTLCFIE 630
+KC++ C ++G PE FC+ C+ E
Sbjct: 800 TKCKQPNCSFYGHPETNNFCSCCYRE 825
Score = 32.0 bits (71), Expect = 2.3
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 746 GAHRGEPAPEDPPKQRCRAPACDHFGNAKCNGYCNECFQ 784
G RG P P + +C+ P C +G+ + N +C+ C++
Sbjct: 790 GGLRGLP----PTQTKCKQPNCSFYGHPETNNFCSCCYR 824
>gi|18702331 OTU domain containing 7A [Homo sapiens]
Length = 926
Score = 172 bits (435), Expect = 1e-42
Identities = 102/271 (37%), Positives = 144/271 (53%), Gaps = 37/271 (13%)
Query: 46 YTLEMFRTCQFCPQFREIIHKALIDRNIQATLESQKKLNW----CREVRKLVALKTNGDG 101
YT ++ + FR I + LI++ LE +LNW C ++L+ L T GDG
Sbjct: 149 YTFQLPDLSVYSEDFRSFIERDLIEQATMVALEQAGRLNWWSTVCTSCKRLLPLATTGDG 208
Query: 102 NCLMHATSQYMWGVQDTDLVLRKALFSTLK---ETDTRNFKFRWQLESLKSQEFVETGLC 158
NCL+HA S MWG D DLVLRKAL++ ++ E + ++RWQ +E
Sbjct: 209 NCLLHAASLGMWGFHDRDLVLRKALYTMMRTGAEREALKRRWRWQQTQQNKEE------- 261
Query: 159 YDTRNWNDEWDNLIKMASTD--TPMARSG-----------LQYNSLEEIHIFVLCNILRR 205
W EW L+K+AS++ T +++G Y SLEE H+FVL +ILRR
Sbjct: 262 ----EWEREWTELLKLASSEPRTHFSKNGGTGGGVDNSEDPVYESLEEFHVFVLAHILRR 317
Query: 206 PIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPAQECYRYPIVLGYDSHHFVPLVTL-- 263
PI+V++D MLR G FAP+ GGIYLPL P C+ P+VL YD HF LV++
Sbjct: 318 PIVVVADTMLRD-SGGEAFAPIPFGGIYLPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQ 376
Query: 264 KDSGPEIRAVPLVNRDRGRFEDLKVHFLTDP 294
+D E +PL + + + L +HF DP
Sbjct: 377 RDQQREQAVIPLTDSEH---KLLPLHFAVDP 404
Score = 31.2 bits (69), Expect = 3.9
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 739 PNQRMGPGAHRGEPAPEDPPKQRCRAPACDHFGNAKCNGYCNECFQ 784
P R RG P P ++RC+ C +G A+ YC+ C++
Sbjct: 870 PTARSNGECGRGGPGPV---QRRCQRENCAFYGRAETEHYCSYCYR 912
>gi|110815809 zinc finger, RAN-binding domain containing 1 protein
[Homo sapiens]
Length = 708
Score = 129 bits (324), Expect = 1e-29
Identities = 99/277 (35%), Positives = 141/277 (50%), Gaps = 44/277 (15%)
Query: 58 PQFREIIHKALIDRNIQATLESQKKL-NWCREVR-----KLVALKTNGDGNCLMHATSQY 111
P +E + ++DR++Q LE + + NW E+ +L AL G+CL+ + Q
Sbjct: 392 PTVQEKLFDEVLDRDVQKELEEESPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQA 451
Query: 112 MWGVQDTDLVLRKALFSTLKETDTRNFKFRWQ-LESLKSQEFVETGLCYDTRN--WNDEW 168
WG+ D D VLRKAL +L + + F RW+ ES SQ F GL + R W ++W
Sbjct: 452 TWGIYDKDSVLRKALHDSLHDC-SHWFYTRWKDWESWYSQSF---GLHFSLREEQWQEDW 507
Query: 169 DNLIKMASTDTPMARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLK 228
++ +AS P A SLE+ HIFVL +ILRRPIIV K +S G +
Sbjct: 508 AFILSLASQ--PGA-------SLEQTHIFVLAHILRRPIIVYGVKYYKSFR-GETLGYTR 557
Query: 229 VGGIYLPLHWPAQECYRYPIVLGYDSHHFVPLVTLKDSG---------------PEIRAV 273
G+YLPL W C++ PI LGY HF LV +++ G I +
Sbjct: 558 FQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNRGAGANLNTDDDVTITFL 617
Query: 274 PLVNRDRGRFEDLKVHFLTDPE---NEMKEKLLKEYL 307
PLV+ +R + L VHFL+ E E +EKLL+E+L
Sbjct: 618 PLVDSER---KLLHVHFLSAQELGNEEQQEKLLREWL 651
>gi|36029914 valosin containing protein (p97)/p47 complex
interacting protein 1 [Homo sapiens]
Length = 1222
Score = 57.8 bits (138), Expect = 4e-08
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 38/198 (19%)
Query: 76 TLESQKKLNWCREVRKLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRKALFSTLKETDT 135
TLE K+ N +E L+ + +GDG+CL+HA S+ + G R+ + L+E
Sbjct: 194 TLEDIKRANKSQEC--LIPVHVDGDGHCLVHAVSRALVG--------RELFWHALRENLK 243
Query: 136 RNFKFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLIKMASTDTPMARSGLQYNSLEEIH 195
++F+ +F++ EW+++I + G+ L IH
Sbjct: 244 QHFQQHLARYQALFHDFIDAA----------EWEDIINECDP-LFVPPEGVPLG-LRNIH 291
Query: 196 IFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPAQEC------YRYPIV 249
IF L N+L RPII++ L + S +++ +LP PA++C PI
Sbjct: 292 IFGLANVLHRPIILLDS--LSGMRSSGDYS-----ATFLPGLIPAEKCTGKDGHLNKPIC 344
Query: 250 LGYDS---HHFVPLVTLK 264
+ + S +H++PLV +K
Sbjct: 345 IAWSSSGRNHYIPLVGIK 362
>gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens]
Length = 208
Score = 38.5 bits (88), Expect = 0.025
Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 3/132 (2%)
Query: 611 GCVYFGTPENKGFCTLCFIEYRENKHFAAASGKVSPTASRFQNTIPCLGRECGTLGSTMF 670
GC ++G P G C++C+ E+ + ++ +++G++SP A+ + L +C
Sbjct: 17 GCGFYGNPRTNGMCSVCYKEHLQRQN--SSNGRISPPATSVSSLSESLPVQCTDGSVPEA 74
Query: 671 EGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTTQSTSRPKCARASCKNILACRSE 730
+ Q E + SSQ D ++ + +AS + SE
Sbjct: 75 QSALDSTSSSMQPSPVSNQSLLSESVASSQ-LDSTSVDKAVPETEDVQASVSDTAQQPSE 133
Query: 731 ELCMECQHPNQR 742
E + P Q+
Sbjct: 134 EQSKSLEKPKQK 145
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 35.4 bits (80), Expect = 0.21
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 702 RDVPRTTQSTSRPKCARASCKNILACRSEELC--MECQHPNQRMGPGAHRGEPAPEDPPK 759
R P + S CA A C + +CR L C GP APE +
Sbjct: 1325 RSFPGSPPGASNASCAAAPCLHGGSCRPAPLAPFFRCACAQGWTGPRCEAPAAAPEVSEE 1384
Query: 760 QRCRAPACD-HFGNAKCNGYCN 780
RC AC G+ +C+ CN
Sbjct: 1385 PRCPRAACQAKRGDQRCDRECN 1406
>gi|239753405 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 35.4 bits (80), Expect = 0.21
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 30/131 (22%)
Query: 484 PFTLNVQHN-GFCERC------HNARQLHASHAPD----HTRHLDPGKCQACLQDVTRTF 532
P +LN Q + GFC R H A +++SH P R++D C C + +F
Sbjct: 38 PISLNCQDSQGFCRRLPLCGTHHGAYSINSSHHPSPELLQMRNMD---CYHCSRG---SF 91
Query: 533 NGICSTCFKRTTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGCLS 592
+G + + + LS SL P + S PH + G ++P +
Sbjct: 92 SGRARSSKHSHRQQQHTVLSQSLSP-------------MESEGPHRRRKPGAESPRRAIE 138
Query: 593 QAARTPGDRTG 603
AR P R G
Sbjct: 139 AGARPPRQRPG 149
>gi|239747975 PREDICTED: hypothetical protein XP_002346485 [Homo
sapiens]
Length = 219
Score = 35.4 bits (80), Expect = 0.21
Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 10/121 (8%)
Query: 484 PFTLNVQHN-GFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTRTFNGICSTCFKR 542
P +LN Q + GFC R H +++ + + H P Q D C C +
Sbjct: 38 PISLNCQDSQGFCRRLPLCGTHHGAYSINSSHHPSPELLQMRNMD--------CYHCSRG 89
Query: 543 TTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGCLSQAARTPGDRT 602
+ + + S S P H S + S PH + G ++P + AR P R
Sbjct: 90 SFSGRARSSKHSHPQQQHTVLSQSLSPM-ESEGPHRRRKPGAESPRRAIEAGARPPRQRP 148
Query: 603 G 603
G
Sbjct: 149 G 149
>gi|239741872 PREDICTED: hypothetical protein XP_002342329 [Homo
sapiens]
Length = 219
Score = 35.4 bits (80), Expect = 0.21
Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 10/121 (8%)
Query: 484 PFTLNVQHN-GFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTRTFNGICSTCFKR 542
P +LN Q + GFC R H +++ + + H P Q D C C +
Sbjct: 38 PISLNCQDSQGFCRRLPLCGTHHGAYSINSSHHPSPELLQMRNMD--------CYHCSRG 89
Query: 543 TTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGCLSQAARTPGDRT 602
+ + + S S P H S + S PH + G ++P + AR P R
Sbjct: 90 SFSGRARSSKHSHPQQQHTVLSQSLSPM-ESEGPHRRRKPGAESPRRAIEAGARPPRQRP 148
Query: 603 G 603
G
Sbjct: 149 G 149
>gi|156231049 zinc finger, AN1-type domain 5 [Homo sapiens]
Length = 213
Score = 35.0 bits (79), Expect = 0.27
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 14/140 (10%)
Query: 611 GCVYFGTPENKGFCTLCFIEYRENKH-------FAAASGKVSPT--ASRFQNTIPCLGRE 661
GC ++G P G C++C+ E+ + + ASG SPT ++ Q L
Sbjct: 17 GCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNC 76
Query: 662 CGTLGSTMFEGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTTQSTSRPKCARASC 721
G GST + Q+ E + E ++ + +V + P ++ S
Sbjct: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPS- 135
Query: 722 KNILACRSEELCMECQHPNQ 741
+SEE E P +
Sbjct: 136 ----TSQSEEKAPELPKPKK 151
>gi|156231047 zinc finger, AN1-type domain 5 [Homo sapiens]
Length = 213
Score = 35.0 bits (79), Expect = 0.27
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 14/140 (10%)
Query: 611 GCVYFGTPENKGFCTLCFIEYRENKH-------FAAASGKVSPT--ASRFQNTIPCLGRE 661
GC ++G P G C++C+ E+ + + ASG SPT ++ Q L
Sbjct: 17 GCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNC 76
Query: 662 CGTLGSTMFEGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTTQSTSRPKCARASC 721
G GST + Q+ E + E ++ + +V + P ++ S
Sbjct: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPS- 135
Query: 722 KNILACRSEELCMECQHPNQ 741
+SEE E P +
Sbjct: 136 ----TSQSEEKAPELPKPKK 151
>gi|5174755 zinc finger, AN1-type domain 5 [Homo sapiens]
Length = 213
Score = 35.0 bits (79), Expect = 0.27
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 14/140 (10%)
Query: 611 GCVYFGTPENKGFCTLCFIEYRENKH-------FAAASGKVSPT--ASRFQNTIPCLGRE 661
GC ++G P G C++C+ E+ + + ASG SPT ++ Q L
Sbjct: 17 GCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNC 76
Query: 662 CGTLGSTMFEGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTTQSTSRPKCARASC 721
G GST + Q+ E + E ++ + +V + P ++ S
Sbjct: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPS- 135
Query: 722 KNILACRSEELCMECQHPNQ 741
+SEE E P +
Sbjct: 136 ----TSQSEEKAPELPKPKK 151
>gi|239754979 PREDICTED: hypothetical protein [Homo sapiens]
Length = 780
Score = 34.3 bits (77), Expect = 0.46
Identities = 47/210 (22%), Positives = 72/210 (34%), Gaps = 32/210 (15%)
Query: 356 WQENSEQGRREGHAQNPMEPSVPQLSLMDVKCETPNCPFFMSVNTQPLCHECSERRQKNQ 415
W E +GRR P+ PSV S V P C + C C++ +++
Sbjct: 300 WAERKREGRRS----EPLRPSVSS-SCAAVSDAAPGC------RSASWCSCCAKESRRSS 348
Query: 416 NKLPKLNSKPGPEGLPGMALGASRGEAYEPLAWNPEESTGGPHSAPPTAPSPFLFSETTA 475
+L +L + P PG A + L W + P P + P FS ++A
Sbjct: 349 RQLSRL--RRSPPTAPGAATSSRHAWDTTALLW--LATVMAPAPPPGSRAGPLYFSSSSA 404
Query: 476 MKCRS-------PGCPFTLNVQHNGFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDV 528
+ PG +L V C C + A+ AP P C
Sbjct: 405 TLVEAAERTASPPGPSVSLTV-----CSLCSSCTFSVAAAAP-----AAPSACDVLKMSE 454
Query: 529 TRTFNGICSTCFKRTTAEASSSLSTSLPPS 558
R+ + F+R E+ + S PS
Sbjct: 455 ERSLELRWTRGFRRERNESCLARPGSSGPS 484
>gi|7705495 zinc finger protein 581 [Homo sapiens]
Length = 197
Score = 33.9 bits (76), Expect = 0.60
Identities = 39/145 (26%), Positives = 55/145 (37%), Gaps = 36/145 (24%)
Query: 450 PEESTGGPHSAPPTAPSPFLFSETTAMKCRSPGCPFTLNVQHNGFCERCHNARQLHASHA 509
P S G P ++ P P+ +L +T G P+T+ V + R+ AS A
Sbjct: 35 PSSSIGSPQASSPPRPNHYLLIDTQ-------GVPYTVLVDEE-------SQREPGASGA 80
Query: 510 PDHTRHLDPGKCQACLQDVTRTFNGICSTCFKRTTAEASSSLSTS--LPPSCHQRSKS-- 565
P KC +C +CS F+ + S++ S P C K+
Sbjct: 81 PGQK------KCYSC---------PVCSRVFEYMSYLQRHSITHSEVKPFECDICGKAFK 125
Query: 566 DPSRLVRSPSPHSCHRAGNDAPAGC 590
S L R HS H AG P GC
Sbjct: 126 RASHLARH---HSIHLAGGGRPHGC 147
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 33.5 bits (75), Expect = 0.79
Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 31/174 (17%)
Query: 607 CRKAGCV-------YFGTPENKG--FCTLCFIEYRENKHFAAASGKVSPTASRFQNTIPC 657
C+ A C Y T EN G FC + Y+ +H V RF+ ++ C
Sbjct: 1443 CKDAACQFSLKVTHYHCTRENCGYKFCGRTHM-YKHAQHHDRVDNLVLDDFKRFKASLSC 1501
Query: 658 LGRECGTLG-STMFEGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTT---QSTSR 713
+C G ST F +C +C R ++ + + ++DV Q +S
Sbjct: 1502 HFADCPFSGTSTHF--HCLRCRF-----RCTDSTKVTAHRKHHGKQDVISAAGFCQFSSS 1554
Query: 714 PKCARASCKNIL----------ACRSEELCMECQHPNQRMGPGAHRGEPAPEDP 757
CA CK L CR + M ++R RGEPA E P
Sbjct: 1555 ADCAVPDCKYKLKCSHFHCTFPGCRHTVVGMSQMDSHKRKHEKQERGEPAAEGP 1608
>gi|209969757 early growth response 2 protein isoform b [Homo
sapiens]
Length = 426
Score = 33.1 bits (74), Expect = 1.0
Identities = 46/181 (25%), Positives = 65/181 (35%), Gaps = 30/181 (16%)
Query: 426 GPEG--LPGMALGASRGEAYEPLAWNPEESTGGPHSAPPTAPSPFLFSETTAMKCRSPGC 483
G EG LPG + A+ A A+NP P P P+ T + R C
Sbjct: 238 GSEGPRLPGSSSAAAAAAA--AAAYNPHHLPLRPILRPRKYPNR---PSKTPVHERPYPC 292
Query: 484 PFTLNVQHNGFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTR---------TFNG 534
P C+R + H HT H P +C+ C+++ +R T G
Sbjct: 293 PAE-------GCDRRFSRSDELTRHIRIHTGH-KPFQCRICMRNFSRSDHLTTHIRTHTG 344
Query: 535 ----ICSTCFKRTTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGC 590
C C ++ T + +R S PS V +PS SC +G P G
Sbjct: 345 EKPFACDYCGRKFARSDERKRHTKIHLRQKERKSSAPSASVPAPSTASC--SGGVQPGGT 402
Query: 591 L 591
L
Sbjct: 403 L 403
>gi|209969755 early growth response 2 protein isoform a [Homo
sapiens]
Length = 476
Score = 33.1 bits (74), Expect = 1.0
Identities = 46/181 (25%), Positives = 65/181 (35%), Gaps = 30/181 (16%)
Query: 426 GPEG--LPGMALGASRGEAYEPLAWNPEESTGGPHSAPPTAPSPFLFSETTAMKCRSPGC 483
G EG LPG + A+ A A+NP P P P+ T + R C
Sbjct: 288 GSEGPRLPGSSSAAAAAAA--AAAYNPHHLPLRPILRPRKYPNR---PSKTPVHERPYPC 342
Query: 484 PFTLNVQHNGFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTR---------TFNG 534
P C+R + H HT H P +C+ C+++ +R T G
Sbjct: 343 PAE-------GCDRRFSRSDELTRHIRIHTGH-KPFQCRICMRNFSRSDHLTTHIRTHTG 394
Query: 535 ----ICSTCFKRTTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGC 590
C C ++ T + +R S PS V +PS SC +G P G
Sbjct: 395 EKPFACDYCGRKFARSDERKRHTKIHLRQKERKSSAPSASVPAPSTASC--SGGVQPGGT 452
Query: 591 L 591
L
Sbjct: 453 L 453
>gi|209969753 early growth response 2 protein isoform a [Homo
sapiens]
Length = 476
Score = 33.1 bits (74), Expect = 1.0
Identities = 46/181 (25%), Positives = 65/181 (35%), Gaps = 30/181 (16%)
Query: 426 GPEG--LPGMALGASRGEAYEPLAWNPEESTGGPHSAPPTAPSPFLFSETTAMKCRSPGC 483
G EG LPG + A+ A A+NP P P P+ T + R C
Sbjct: 288 GSEGPRLPGSSSAAAAAAA--AAAYNPHHLPLRPILRPRKYPNR---PSKTPVHERPYPC 342
Query: 484 PFTLNVQHNGFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTR---------TFNG 534
P C+R + H HT H P +C+ C+++ +R T G
Sbjct: 343 PAE-------GCDRRFSRSDELTRHIRIHTGH-KPFQCRICMRNFSRSDHLTTHIRTHTG 394
Query: 535 ----ICSTCFKRTTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGC 590
C C ++ T + +R S PS V +PS SC +G P G
Sbjct: 395 EKPFACDYCGRKFARSDERKRHTKIHLRQKERKSSAPSASVPAPSTASC--SGGVQPGGT 452
Query: 591 L 591
L
Sbjct: 453 L 453
>gi|9845524 early growth response 2 protein isoform a [Homo sapiens]
Length = 476
Score = 33.1 bits (74), Expect = 1.0
Identities = 46/181 (25%), Positives = 65/181 (35%), Gaps = 30/181 (16%)
Query: 426 GPEG--LPGMALGASRGEAYEPLAWNPEESTGGPHSAPPTAPSPFLFSETTAMKCRSPGC 483
G EG LPG + A+ A A+NP P P P+ T + R C
Sbjct: 288 GSEGPRLPGSSSAAAAAAA--AAAYNPHHLPLRPILRPRKYPNR---PSKTPVHERPYPC 342
Query: 484 PFTLNVQHNGFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTR---------TFNG 534
P C+R + H HT H P +C+ C+++ +R T G
Sbjct: 343 PAE-------GCDRRFSRSDELTRHIRIHTGH-KPFQCRICMRNFSRSDHLTTHIRTHTG 394
Query: 535 ----ICSTCFKRTTAEASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGC 590
C C ++ T + +R S PS V +PS SC +G P G
Sbjct: 395 EKPFACDYCGRKFARSDERKRHTKIHLRQKERKSSAPSASVPAPSTASC--SGGVQPGGT 452
Query: 591 L 591
L
Sbjct: 453 L 453
>gi|239756611 PREDICTED: hypothetical protein [Homo sapiens]
Length = 166
Score = 33.1 bits (74), Expect = 1.0
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 512 HTRHLDPGKCQACLQDVTRTFNGICSTCFKRTTAEASSSLS--TSLPPSCHQRSKSDPSR 569
H+RH G A T + + T +R S +S +S PPSC + + + R
Sbjct: 80 HSRHSASGSSSASTCRGTPSCGALRPTQRRRRITWTSRCVSRCSSGPPSCARSTGAATPR 139
Query: 570 LVRSPSPHSCHRAGNDAPA 588
SP+ H+C G+ P+
Sbjct: 140 STGSPTWHTCENGGSGGPS 158
>gi|239751099 PREDICTED: hypothetical protein XP_002347699 [Homo
sapiens]
Length = 166
Score = 33.1 bits (74), Expect = 1.0
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 512 HTRHLDPGKCQACLQDVTRTFNGICSTCFKRTTAEASSSLS--TSLPPSCHQRSKSDPSR 569
H+RH G A T + + T +R S +S +S PPSC + + + R
Sbjct: 80 HSRHSASGSSSASTCRGTPSCGALRPTQRRRRITWTSRCVSRCSSGPPSCARSTGAATPR 139
Query: 570 LVRSPSPHSCHRAGNDAPA 588
SP+ H+C G+ P+
Sbjct: 140 STGSPTWHTCENGGSGGPS 158
>gi|239745586 PREDICTED: hypothetical protein XP_002344136 [Homo
sapiens]
Length = 166
Score = 33.1 bits (74), Expect = 1.0
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 512 HTRHLDPGKCQACLQDVTRTFNGICSTCFKRTTAEASSSLS--TSLPPSCHQRSKSDPSR 569
H+RH G A T + + T +R S +S +S PPSC + + + R
Sbjct: 80 HSRHSASGSSSASTCRGTPSCGALRPTQRRRRITWTSRCVSRCSSGPPSCARSTGAATPR 139
Query: 570 LVRSPSPHSCHRAGNDAPA 588
SP+ H+C G+ P+
Sbjct: 140 STGSPTWHTCENGGSGGPS 158
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 32.7 bits (73), Expect = 1.3
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 18/123 (14%)
Query: 449 NPEESTGGPHS---APPTAPSPFLFSETTAMKCRSPGCPFTLNVQHNGFCERCHNARQLH 505
N ++ TGGP+ P P ++ T+ C+ CP LN+ N F CH R L
Sbjct: 775 NCKDHTGGPYCDKCLPGFYGEP---TKGTSEDCQPCACP--LNIPSNNFSPTCHLDRSLG 829
Query: 506 ASHAPDHTRHLDPGKCQACLQDV---TRTFNGICSTCFKRTTAEASSSLSTSLPPSCHQR 562
+ P +C+ C + G C C + + +L S+P SC
Sbjct: 830 LICDGCPVGYTGP-RCERCAEGYFGQPSVPGGSCQPC------QCNDNLDFSIPGSCDSL 882
Query: 563 SKS 565
S S
Sbjct: 883 SGS 885
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 32.7 bits (73), Expect = 1.3
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 18/123 (14%)
Query: 449 NPEESTGGPHS---APPTAPSPFLFSETTAMKCRSPGCPFTLNVQHNGFCERCHNARQLH 505
N ++ TGGP+ P P ++ T+ C+ CP LN+ N F CH R L
Sbjct: 775 NCKDHTGGPYCDKCLPGFYGEP---TKGTSEDCQPCACP--LNIPSNNFSPTCHLDRSLG 829
Query: 506 ASHAPDHTRHLDPGKCQACLQDV---TRTFNGICSTCFKRTTAEASSSLSTSLPPSCHQR 562
+ P +C+ C + G C C + + +L S+P SC
Sbjct: 830 LICDGCPVGYTGP-RCERCAEGYFGQPSVPGGSCQPC------QCNDNLDFSIPGSCDSL 882
Query: 563 SKS 565
S S
Sbjct: 883 SGS 885
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 32.7 bits (73), Expect = 1.3
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 543 TTAEASSSLSTS-LPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAP-AGCLSQAARTP 598
+++ ASSSLS+S PP R++ + +R + P H CH+ + P CL Q P
Sbjct: 158 SSSSASSSLSSSPQPPPRGDRARDEGARR-QGPGAHLCHQKSSSLPGTACLEQLLEPP 214
>gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens]
Length = 398
Score = 32.7 bits (73), Expect = 1.3
Identities = 55/195 (28%), Positives = 69/195 (35%), Gaps = 29/195 (14%)
Query: 431 PGMALGASRGEAYEPLAWNPEESTGGPHSAPPTAPSPFLFSETTAM-KCRSPGCPFTLNV 489
PG LGA+ +P ESTG +APPT SE + +CRSP P + V
Sbjct: 93 PGAGLGAAS-------TVDPSESTGSS-TAPPTKRHCRSLSEPEELVRCRSPWRPGSSKV 144
Query: 490 QHNGFCERCHNARQLHASHAPDHTRHLDPGKCQACLQDVTRTFNGICSTCFKRTTA---- 545
RC + TR PG A L G S R ++
Sbjct: 145 WTPVSKRRCDSGGSA--------TRQGSPG---AVLPRSAVWSTGPTSPATPRPSSASGG 193
Query: 546 --EASSSLSTSLPPSCHQRSKSDPSRLVRSPSPHSCHRAGNDAPAGCLSQAARTP--GDR 601
++S + S P C S +R S S AG P S TP G R
Sbjct: 194 FVDSSEGSAGSGPLWCSAESCLPSTRRRPSLSQERLAGAGTPLP-WASSSPTSTPALGGR 252
Query: 602 TGTSKCRKAGCVYFG 616
G +CR CV G
Sbjct: 253 RGLLRCRSQPCVLSG 267
>gi|223890259 midline 2 isoform 2 [Homo sapiens]
Length = 705
Score = 32.3 bits (72), Expect = 1.8
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 16/107 (14%)
Query: 685 RFHEAKRTEEQLRSSQRRDV---PRTTQSTSRPKCA-------RASCKNILACRSE--EL 732
RF +A + S RR+ P T S+ R C R + K + C +
Sbjct: 105 RFQKASVSGPNSPSESRRERTYRPTTAMSSERIACQFCEQDPPRDAVKTCITCEVSYCDR 164
Query: 733 CMECQHPNQRMGPGAHRGEPAPEDPPKQRCRAPACDHFGNAKCNGYC 779
C+ HPN++ EP P+ R C N K N YC
Sbjct: 165 CLRATHPNKKPFTSHRLVEPVPD----THLRGITCLDHENEKVNMYC 207
>gi|223890257 midline 2 isoform 1 [Homo sapiens]
Length = 735
Score = 32.3 bits (72), Expect = 1.8
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 16/107 (14%)
Query: 685 RFHEAKRTEEQLRSSQRRDV---PRTTQSTSRPKCA-------RASCKNILACRSE--EL 732
RF +A + S RR+ P T S+ R C R + K + C +
Sbjct: 105 RFQKASVSGPNSPSESRRERTYRPTTAMSSERIACQFCEQDPPRDAVKTCITCEVSYCDR 164
Query: 733 CMECQHPNQRMGPGAHRGEPAPEDPPKQRCRAPACDHFGNAKCNGYC 779
C+ HPN++ EP P+ R C N K N YC
Sbjct: 165 CLRATHPNKKPFTSHRLVEPVPD----THLRGITCLDHENEKVNMYC 207
>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 32.3 bits (72), Expect = 1.8
Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 19/173 (10%)
Query: 451 EESTGGPHSAPPTAPSPF---------LFSETTAMKCRSPGCPFTLNVQHNGFCERCHNA 501
E S GGP P + S S + +CR P CP + C +
Sbjct: 22 EVSCGGPICLPSSCQSQTWQLVTCQDSCGSSSCGPQCRQPSCPVSS-------CAQPLCC 74
Query: 502 RQLHASHAPDHTRHLDPGKCQACLQDVTRTFNGICS-TCFKRTTAEASSSLSTSLPPSCH 560
+ + + P C+A + + + + CF+ T E S S+S P C
Sbjct: 75 DPVICEPSCSVSSGCQPVCCEATTCEPSCSVSNCYQPVCFEATICEPSCSVSNCCQPVCF 134
Query: 561 QRSKSDPSRLVRSPSPHSCHRAGNDAPAGCLSQAARTPGDRTGTSKCRKAGCV 613
+ + +PS V S + C P+ +S + G + C+ CV
Sbjct: 135 EATVCEPSCSVSSCAQPVCCEPAICEPSCSVSSCCQPVGSE--ATSCQPVLCV 185
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,148,231
Number of Sequences: 37866
Number of extensions: 1830070
Number of successful extensions: 7397
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 7272
Number of HSP's gapped (non-prelim): 159
length of query: 790
length of database: 18,247,518
effective HSP length: 110
effective length of query: 680
effective length of database: 14,082,258
effective search space: 9575935440
effective search space used: 9575935440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.