Guide to the Human Genome
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Name: PPP2R5A Sequence: fasta or formatted (486aa) NCBI GI: 5453950
Description:

protein phosphatase 2, regulatory subunit B (B56), alpha isoform

Referenced in:

Serine / Threonine Protein Phosphatases
Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         30           2
 C cysteine            1.2          6           2
 D aspartate           4.1         20           2
 E glutamate           9.7         47           2
 F phenylalanine       6.4         31           2
 G glycine             2.9         14           1
 H histidine           2.1         10           1
 I isoleucine          6.8         33           2
 K lysine              8.6         42           3
 L leucine            11.5         56           2
 M methionine          2.1         10           1
 N asparagine          3.7         18           2
 P proline             4.3         21           2
 Q glutamine           5.6         27           2
 R arginine            4.3         21           1
 S serine              8.4         41           4
 T threonine           3.7         18           2
 V valine              4.7         23           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 2, regulatory subunit B (B56), al... 
PPP2R5E               0.774   epsilon isoform of regulatory subunit B56, protein ph...
PPP2R5B               0.723   beta isoform of regulatory subunit B56, protein phosp...
PPP2R5C               0.641   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5D               0.637   delta isoform of regulatory subunit B56, protein phos...
PPP2R5C               0.631   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.628   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.625   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.625   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.621   delta isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.616   delta isoform of regulatory subunit B56, protein pho...
FAM186A               0.015   family with sequence similarity 186, member A [Homo...
FILIP1                0.011   filamin A interacting protein 1 
BAZ1A                 0.011   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.011   bromodomain adjacent to zinc finger domain, 1A isofo...
KIF16B                0.010   kinesin-like motor protein C20orf23 
ITSN2                 0.010   intersectin 2 isoform 3 
ITSN2                 0.010   intersectin 2 isoform 1 
ITSN2                 0.010   intersectin 2 isoform 2 
RNF103                0.009   ring finger protein 103 
RPGRIP1               0.009   retinitis pigmentosa GTPase regulator interacting p...
ITSN1                 0.007   intersectin 1 isoform ITSN-s 
ITSN1                 0.007   intersectin 1 isoform ITSN-l 
GOLGB1                0.007   golgi autoantigen, golgin subfamily b, macrogolgin ...
ZFC3H1                0.006   proline/serine-rich coiled-coil 2 
LOC283767             0.006   golgi autoantigen, golgin subfamily a-like 
MAML2                 0.006   mastermind-like 2 
LOC440243             0.006   PREDICTED: Putative golgin subfamily A member 6-lik...
CEP164                0.006   centrosomal protein 164kDa 
ATXN3L                0.006   ataxin 3-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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