Guide to the Human Genome
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Name: PPP2R5D Sequence: fasta or formatted (602aa) NCBI GI: 5453954
Description:

delta isoform of regulatory subunit B56, protein phosphatase 2A isoform 1

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [570aa] delta isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [496aa] delta isoform of regulatory subunit B56, protein phosphatase 2A i...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         34           2
 C cysteine            1.0          6           2
 D aspartate           3.5         21           2
 E glutamate          10.0         60           2
 F phenylalanine       5.3         32           2
 G glycine             2.7         16           3
 H histidine           2.3         14           2
 I isoleucine          5.0         30           2
 K lysine              8.6         52           2
 L leucine            11.1         67           2
 M methionine          2.5         15           1
 N asparagine          3.5         21           2
 P proline             8.1         49           3
 Q glutamine           5.5         33           2
 R arginine            5.3         32           2
 S serine              6.6         40           3
 T threonine           4.0         24           1
 V valine              5.0         30           2
 W tryptophan          0.8          5           1
 Y tyrosine            3.5         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   delta isoform of regulatory subunit B56, protein phos... 
PPP2R5D               0.934   delta isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.805   delta isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.685   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.681   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.676   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.638   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.618   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5E               0.507   epsilon isoform of regulatory subunit B56, protein ph...
PPP2R5A               0.502   protein phosphatase 2, regulatory subunit B (B56), al...
PPP2R5B               0.495   beta isoform of regulatory subunit B56, protein phosp...
ZFHX4                 0.020   zinc finger homeodomain 4 
SFRS15                0.015   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.015   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.015   splicing factor, arginine/serine-rich 15 isoform 1 [...
PPP1R13L              0.014   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.014   protein phosphatase 1, regulatory subunit 13 like [H...
MYST3                 0.013   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.013   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.013   MYST histone acetyltransferase (monocytic leukemia)...
KIAA0907              0.013   hypothetical protein LOC22889 
PHLDA1                0.012   pleckstrin homology-like domain, family A, member 1 ...
PRB1                  0.012   proline-rich protein BstNI subfamily 1 isoform 1 pre...
SREBF2                0.011   sterol regulatory element-binding transcription fact...
SART1                 0.011   squamous cell carcinoma antigen recognized by T cell...
DOK2                  0.010   docking protein 2 
GAPDHS                0.010   glyceraldehyde-3-phosphate dehydrogenase, spermatogen...
BPTF                  0.010   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.010   bromodomain PHD finger transcription factor isoform ...
BAT2                  0.010   HLA-B associated transcript-2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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