Guide to the Human Genome
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Name: PPP2R5C Sequence: fasta or formatted (524aa) NCBI GI: 31083259
Description:

gamma isoform of regulatory subunit B56, protein phosphatase 2A isoform a

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [555aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [540aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [485aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [449aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         35           2
 C cysteine            1.3          7           2
 D aspartate           5.0         26           2
 E glutamate           8.8         46           2
 F phenylalanine       5.5         29           2
 G glycine             2.1         11           1
 H histidine           3.2         17           2
 I isoleucine          5.3         28           2
 K lysine              8.4         44           2
 L leucine            11.6         61           2
 M methionine          3.1         16           1
 N asparagine          4.2         22           2
 P proline             6.5         34           2
 Q glutamine           4.4         23           2
 R arginine            4.4         23           2
 S serine              5.0         26           2
 T threonine           3.8         20           2
 V valine              6.1         32           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.4         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma isoform of regulatory subunit B56, protein pho... 
PPP2R5C               0.943   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.908   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.850   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.843   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.775   delta isoform of regulatory subunit B56, protein phos...
PPP2R5D               0.769   delta isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.768   delta isoform of regulatory subunit B56, protein pho...
PPP2R5E               0.569   epsilon isoform of regulatory subunit B56, protein ph...
PPP2R5A               0.567   protein phosphatase 2, regulatory subunit B (B56), al...
PPP2R5B               0.546   beta isoform of regulatory subunit B56, protein phosp...
PEX3                  0.009   peroxisomal biogenesis factor 3 
UACA                  0.008   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.008   uveal autoantigen with coiled-coil domains and ankyr...
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform b 
PML                   0.007   promyelocytic leukemia protein isoform 2 
PML                   0.007   promyelocytic leukemia protein isoform 9 
PML                   0.007   promyelocytic leukemia protein isoform 6 
PML                   0.007   promyelocytic leukemia protein isoform 1 
PML                   0.007   promyelocytic leukemia protein isoform 5 
ARHGAP12              0.007   Rho GTPase activating protein 12 
WDR91                 0.006   WD repeat domain 91 
RPGRIP1               0.006   retinitis pigmentosa GTPase regulator interacting p...
NEFH                  0.005   neurofilament, heavy polypeptide 200kDa 
UTRN                  0.005   utrophin 
ARHGEF16              0.005   Rho guanine exchange factor 16 
TAF3                  0.005   RNA polymerase II transcription factor TAFII140 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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