ATXN3L 12379

Name: ATXN3L	Sequence: fasta or formatted (355aa)		NCBI GI: 209862748
Description: ataxin 3-like		Referenced in: Cerebellum
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 16 2 C cysteine 1.7 6 1 D aspartate 6.2 22 2 E glutamate 11.0 39 3 F phenylalanine 4.8 17 2 G glycine 4.8 17 2 H histidine 3.1 11 1 I isoleucine 5.6 20 2 K lysine 6.8 24 2 L leucine 9.6 34 2 M methionine 2.0 7 1 N asparagine 4.2 15 2 P proline 3.4 12 1 Q glutamine 8.5 30 5 R arginine 3.7 13 1 S serine 8.7 31 2 T threonine 4.5 16 2 V valine 3.9 14 2 W tryptophan 0.8 3 1 Y tyrosine 2.3 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ataxin 3-like ATXN3 0.664 ataxin 3 isoform 1 ATXN3 0.610 ataxin 3 isoform 3 ATXN3 0.500 ataxin 3 isoform 2 ATXN3 0.330 ataxin 3 isoform 4 JOSD2 0.039 Josephin domain containing 2 JOSD1 0.032 Josephin domain containing 1 AHCTF1 0.026 transcription factor ELYS TRDN 0.022 triadin ASXL2 0.022 additional sex combs like 2 LEO1 0.020 Leo1, Paf1/RNA polymerase II complex component, homo... SETD1A 0.020 SET domain containing 1A ATRX 0.020 transcriptional regulator ATRX isoform 2 ATRX 0.020 transcriptional regulator ATRX isoform 1 PCDH15 0.019 protocadherin 15 isoform CD2-1 precursor FAM184A 0.019 hypothetical protein LOC79632 isoform 2 FAM184A 0.019 hypothetical protein LOC79632 isoform 1 SUPT6H 0.019 suppressor of Ty 6 homolog CCDC82 0.017 coiled-coil domain containing 82 TCHH 0.017 trichohyalin MINK1 0.017 misshapen/NIK-related kinase isoform 4 MINK1 0.017 misshapen/NIK-related kinase isoform 2 MINK1 0.017 misshapen/NIK-related kinase isoform 3 MINK1 0.017 misshapen/NIK-related kinase isoform 1 MAML2 0.017 mastermind-like 2 FAM133A 0.017 hypothetical protein LOC286499 LRBA 0.016 LPS-responsive vesicle trafficking, beach and ancho... DEF6 0.014 differentially expressed in FDCP 6 homolog CPSF2 0.014 cleavage and polyadenylation specific factor 2 [Homo... SETD1B 0.014 SET domain containing 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.