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Search of human proteins with 5453946
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5453946 protein phosphatase 1, regulatory subunit 2 [Homo
sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5453946 protein phosphatase 1, regulatory subunit 2 [Homo sap... 409 e-115
gi|169211651 PREDICTED: similar to protein phosphatase 1, regula... 90 1e-18
gi|169210870 PREDICTED: similar to hCG2036610 [Homo sapiens] 90 1e-18
gi|169211258 PREDICTED: similar to hCG2036610 [Homo sapiens] 88 6e-18
gi|55769587 probable nucleolar complex protein 14 [Homo sapiens] 43 2e-04
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo... 38 0.005
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 35 0.034
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 35 0.034
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 35 0.034
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 35 0.034
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.034
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.034
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.034
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.034
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.034
gi|7661950 SH2 domain binding protein 1 [Homo sapiens] 35 0.034
gi|148746195 trichohyalin [Homo sapiens] 35 0.045
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 35 0.045
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 35 0.058
gi|11968150 GDNF-inducible zinc finger protein 1 [Homo sapiens] 34 0.076
gi|55956788 nucleolin [Homo sapiens] 34 0.099
gi|189491776 nephrocystin 1 isoform 3 [Homo sapiens] 34 0.099
gi|189491774 nephrocystin 1 isoform 2 [Homo sapiens] 34 0.099
gi|46397398 nephrocystin 1 isoform 1 [Homo sapiens] 34 0.099
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 34 0.099
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.099
gi|210032580 SET domain containing 1B [Homo sapiens] 34 0.099
gi|22758136 MAP7 domain containing 2 [Homo sapiens] 34 0.099
gi|221316624 dystonin isoform 4 [Homo sapiens] 33 0.13
gi|221316622 dystonin isoform 3 [Homo sapiens] 33 0.13
>gi|5453946 protein phosphatase 1, regulatory subunit 2 [Homo
sapiens]
Length = 205
Score = 409 bits (1051), Expect = e-115
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD 60
MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD
Sbjct: 1 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD 60
Query: 61 KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE 120
KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE
Sbjct: 61 KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE 120
Query: 121 SSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG 180
SSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG
Sbjct: 121 SSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG 180
Query: 181 ESMNTEESNQGSTPSDQQQNKLRSS 205
ESMNTEESNQGSTPSDQQQNKLRSS
Sbjct: 181 ESMNTEESNQGSTPSDQQQNKLRSS 205
>gi|169211651 PREDICTED: similar to protein phosphatase 1,
regulatory (inhibitor) subunit 2 [Homo sapiens]
Length = 387
Score = 90.1 bits (222), Expect = 1e-18
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 21/169 (12%)
Query: 12 KGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPADKDYGLMKIDEP 71
+ IL+ +S + E PR +KSQ WDEMNILATY PADKDYG M +DEP
Sbjct: 149 RSILRKNSSNLMQKSPNVENPR--------RKSQHWDEMNILATYRPADKDYGFMMVDEP 200
Query: 72 STPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDSDLSP 131
+TPYH + ED + + ++ P +LA + +E L + R + Q + DS
Sbjct: 201 NTPYHRLQDSFEDLSAGSSC--SVNPGVLAERGRWSEPL-ARVRWESQALTMVTDS---- 253
Query: 132 EEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG 180
F+ +RK HY++G +K + ++ D+D++ ++ + G
Sbjct: 254 ------TDFDKRRKAHYDKGKFLKAQKNQPLENEEDEDDNGGIISISGG 296
>gi|169210870 PREDICTED: similar to hCG2036610 [Homo sapiens]
Length = 387
Score = 90.1 bits (222), Expect = 1e-18
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 21/169 (12%)
Query: 12 KGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPADKDYGLMKIDEP 71
+ IL+ +S + E PR +KSQ WDEMNILATY PADKDYG M +DEP
Sbjct: 149 RSILRKNSSNLMQKSPNVENPR--------RKSQHWDEMNILATYRPADKDYGFMMVDEP 200
Query: 72 STPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDSDLSP 131
+TPYH + ED + + ++ P +LA + +E L + R + Q + DS
Sbjct: 201 NTPYHRLQDSFEDLSAGSSC--SVNPGVLAERGRWSEPL-ARVRWESQALTMVTDS---- 253
Query: 132 EEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG 180
F+ +RK HY++G +K + ++ D+D++ ++ + G
Sbjct: 254 ------TDFDKRRKAHYDKGKFLKAQKNQPLENEEDEDDNGGIISISGG 296
>gi|169211258 PREDICTED: similar to hCG2036610 [Homo sapiens]
Length = 387
Score = 87.8 bits (216), Expect = 6e-18
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 12 KGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPADKDYGLMKIDEP 71
+ IL+ +S + E PR +KSQ WDEMNILATY PADKDY M +DEP
Sbjct: 149 RSILRKNSSNLMQKSPNVENPR--------RKSQHWDEMNILATYRPADKDYAFMMVDEP 200
Query: 72 STPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDSDLSP 131
+TPYH + ED + + ++ P +LA + +E L + R + Q + DS
Sbjct: 201 NTPYHRLQDSFEDLSAGSSC--SVNPGVLAERGRWSEPL-ARVRWESQALTMVTDS---- 253
Query: 132 EEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG 180
F+ +RK HY++G +K + ++ D+D++ ++ + G
Sbjct: 254 ------TDFDKRRKAHYDKGKFLKAQKNQPLENEEDEDDNGGIISISGG 296
>gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]
Length = 857
Score = 42.7 bits (99), Expect = 2e-04
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 13 GILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPADKDYGLM---KID 69
G+L KT + + ++E ++K Q+ E A ++ L K+D
Sbjct: 170 GLLHKKTQQEGEEREKPKSRKELIEELIAKSKQEKRERQ-------AQREDALELTEKLD 222
Query: 70 EPSTPYHSMMGDDEDACSDTEATEAMAPD---ILARKLAAAEGLEPKYRIQEQESSGEED 126
+ +++ + + E PD ++ R+L +P R++ +
Sbjct: 223 QDWKEIQTLLSHKTPKSENRDKKEKPKPDAYDMMVRELGFEMKAQPSNRMKTE------- 275
Query: 127 SDLSPEEREKKRQFE---MKRKLHYNEGLNIKLARQLISKDLHD----DDEDEEMLETAD 179
++L+ EE+E R+ E ++R L +E N+K + + + DL+D D +D +L D
Sbjct: 276 AELAKEEQEHLRKLEAERLRRMLGKDEDENVKKPKHMSADDLNDGFVLDKDDRRLLSYKD 335
Query: 180 GESMNTEE---SNQGSTPSDQQQNK 201
G+ MN EE Q SD + N+
Sbjct: 336 GK-MNVEEDVQEEQSKEASDPESNE 359
Score = 31.2 bits (69), Expect = 0.64
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 15/84 (17%)
Query: 113 KYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDE 172
K + + GE +S++SPEE+ KR F ++++ H+ + K +++ +EDE
Sbjct: 79 KSNVFRDKRFGEYNSNMSPEEKMMKR-FALEQQRHHEK------------KSIYNLNEDE 125
Query: 173 EMLETADGESMNTEESNQGSTPSD 196
E+ T G+S+ E + SD
Sbjct: 126 EL--THYGQSLADIEKHNDIVDSD 147
>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
sapiens]
Length = 1802
Score = 38.1 bits (87), Expect = 0.005
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 24/183 (13%)
Query: 18 KTSTTSSMVASAEQPRGNVDE-ELSKKSQKWDEMNILATYHP-----ADKDYGL---MKI 68
++S++S + A P+G + +L K+ + ++ T P +D GL +
Sbjct: 1453 RSSSSSLSSSGAPSPKGKQKQMKLQPKNDQNTSVSHARTSSPFSSPVSDAAEGLSLYLLD 1512
Query: 69 DEPSTPY-------HSMMGDDEDACSDTEATEAMAP----DILARKLAAAEGLEPKYRIQ 117
DEP P+ +S G+ D + P L L +G EP+ I+
Sbjct: 1513 DEPDGPFSSSSFGGYSRSGNSHDPGKAKSFRNRVLPVKQDHSLDGPLTNGDGREPRTGIK 1572
Query: 118 EQE-SSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLE 176
+ S+ EED ++ E++EKK E K K H + + +L L S+ D D E
Sbjct: 1573 RKLLSASEEDENMGGEDKEKK---ETKEKSHLSTSESGELGSSLSSESTCGSDSDSESTS 1629
Query: 177 TAD 179
D
Sbjct: 1630 RTD 1632
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 35.4 bits (80), Expect = 0.034
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 108 EGLEPKYRIQEQESSGEEDSDLSPEERE--KKRQFE---MKRKLHYNEGLNIKLARQLIS 162
E + P +E +S E D D S ++ E +R+FE +++ L EG +L ++
Sbjct: 531 EEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLD-EEGSEKELHENVLD 589
Query: 163 KDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNK 201
K+L ++D + E E + EE ++ D + +
Sbjct: 590 KELEENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKE 628
Score = 28.9 bits (63), Expect = 3.2
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 14/125 (11%)
Query: 76 HSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDS-------- 127
H + D E +D+E +E D + K+ EG E ++ E EED+
Sbjct: 584 HENVLDKELEENDSENSEF--EDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDE 641
Query: 128 --DLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNT 185
+ EE ++ E K + KL + S D D+D D + +E AD +
Sbjct: 642 SDEKEDEEYADEKGLEAADKKAEEGDADEKLFEE--SDDKEDEDADGKEVEDADEKLFED 699
Query: 186 EESNQ 190
++SN+
Sbjct: 700 DDSNE 704
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 35.4 bits (80), Expect = 0.034
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 108 EGLEPKYRIQEQESSGEEDSDLSPEERE--KKRQFE---MKRKLHYNEGLNIKLARQLIS 162
E + P +E +S E D D S ++ E +R+FE +++ L EG +L ++
Sbjct: 531 EEVGPTKESEEDDSEKESDEDCSEKQSEDGSEREFEENGLEKDLD-EEGSEKELHENVLD 589
Query: 163 KDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNK 201
K+L ++D + E E + EE ++ D + +
Sbjct: 590 KELEENDSENSEFEDDGSEKVLDEEGSEREFDEDSDEKE 628
Score = 28.9 bits (63), Expect = 3.2
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 14/125 (11%)
Query: 76 HSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDS-------- 127
H + D E +D+E +E D + K+ EG E ++ E EED+
Sbjct: 584 HENVLDKELEENDSENSEF--EDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDE 641
Query: 128 --DLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNT 185
+ EE ++ E K + KL + S D D+D D + +E AD +
Sbjct: 642 SDEKEDEEYADEKGLEAADKKAEEGDADEKLFEE--SDDKEDEDADGKEVEDADEKLFED 699
Query: 186 EESNQ 190
++SN+
Sbjct: 700 DDSNE 704
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 64 GLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSG 123
G + E ++ D +D SD+E + A A + +E E + +E+E S
Sbjct: 236 GRKPVKEEKMEERDLLSDLQDI-SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGST 294
Query: 124 EEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDED------EEMLET 177
E+S+ EE E++ + +E +++ + +S+D ++E+ E +
Sbjct: 295 SEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDR 354
Query: 178 ADGESMNTEESNQGSTP 194
GES EE TP
Sbjct: 355 DSGESEEAEEEVGEGTP 371
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 64 GLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSG 123
G + E ++ D +D SD+E + A A + +E E + +E+E S
Sbjct: 246 GRKPVKEEKMEERDLLSDLQDI-SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGST 304
Query: 124 EEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDED------EEMLET 177
E+S+ EE E++ + +E +++ + +S+D ++E+ E +
Sbjct: 305 SEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDR 364
Query: 178 ADGESMNTEESNQGSTP 194
GES EE TP
Sbjct: 365 DSGESEEAEEEVGEGTP 381
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 64 GLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSG 123
G + E ++ D +D SD+E + A A + +E E + +E+E S
Sbjct: 237 GRKPVKEEKMEERDLLSDLQDI-SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGST 295
Query: 124 EEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDED------EEMLET 177
E+S+ EE E++ + +E +++ + +S+D ++E+ E +
Sbjct: 296 SEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDR 355
Query: 178 ADGESMNTEESNQGSTP 194
GES EE TP
Sbjct: 356 DSGESEEAEEEVGEGTP 372
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 64 GLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSG 123
G + E ++ D +D SD+E + A A + +E E + +E+E S
Sbjct: 246 GRKPVKEEKMEERDLLSDLQDI-SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGST 304
Query: 124 EEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDED------EEMLET 177
E+S+ EE E++ + +E +++ + +S+D ++E+ E +
Sbjct: 305 SEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDR 364
Query: 178 ADGESMNTEESNQGSTP 194
GES EE TP
Sbjct: 365 DSGESEEAEEEVGEGTP 381
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 64 GLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSG 123
G + E ++ D +D SD+E + A A + +E E + +E+E S
Sbjct: 214 GRKPVKEEKMEERDLLSDLQDI-SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGST 272
Query: 124 EEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDED------EEMLET 177
E+S+ EE E++ + +E +++ + +S+D ++E+ E +
Sbjct: 273 SEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDR 332
Query: 178 ADGESMNTEESNQGSTP 194
GES EE TP
Sbjct: 333 DSGESEEAEEEVGEGTP 349
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 64 GLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSG 123
G + E ++ D +D SD+E + A A + +E E + +E+E S
Sbjct: 203 GRKPVKEEKMEERDLLSDLQDI-SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGST 261
Query: 124 EEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDED------EEMLET 177
E+S+ EE E++ + +E +++ + +S+D ++E+ E +
Sbjct: 262 SEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDR 321
Query: 178 ADGESMNTEESNQGSTP 194
GES EE TP
Sbjct: 322 DSGESEEAEEEVGEGTP 338
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 64 GLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSG 123
G + E ++ D +D SD+E + A A + +E E + +E+E S
Sbjct: 248 GRKPVKEEKMEERDLLSDLQDI-SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGST 306
Query: 124 EEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDED------EEMLET 177
E+S+ EE E++ + +E +++ + +S+D ++E+ E +
Sbjct: 307 SEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDR 366
Query: 178 ADGESMNTEESNQGSTP 194
GES EE TP
Sbjct: 367 DSGESEEAEEEVGEGTP 383
>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
Length = 1173
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 108 EGLEPKYRIQEQESSGEEDSD-----LSPEEREKKRQFEMKRKLHYNEGLNIKLARQLIS 162
EG E K + + + GEE SD P+ ++++ K+K E L + ++ S
Sbjct: 951 EGGERKKKKRRRHPKGEEGSDDDETENGPKPKKRRPPKAEKKKAPKPERLPPSMKGKIKS 1010
Query: 163 KDL---HDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNKLRSS 205
K + DD DE+ L+ AD SN S D+Q+ K SS
Sbjct: 1011 KAIISSSDDSSDEDKLKIADEGHPRNSNSNSDS-DEDEQRKKCASS 1055
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 35.0 bits (79), Expect = 0.045
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 83 EDACSDTEATEAMAPDILA--RKLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQF 140
E C + E + +L R+ + LE +YR E+E +E+ L EE EK+R+
Sbjct: 1107 ERQCREEEELQQEEEQLLREEREKRRRQELERQYR--EEEEVQQEEEQLLREEPEKRRRQ 1164
Query: 141 EMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQN 200
E++R+ Y E ++ + + ++ + E + + E + ++ Q DQ+ +
Sbjct: 1165 ELERQ--YREEEELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSD 1222
Score = 34.7 bits (78), Expect = 0.058
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 104 LAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISK 163
L A L+ + R +EQ+ EE+ +L EEREK+R+ E +R+ E L + + L +
Sbjct: 889 LYAKPALQEQLR-KEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREE 947
Query: 164 DLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNK 201
++ E D + EE G P +++ +
Sbjct: 948 REKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQE 985
Score = 34.7 bits (78), Expect = 0.058
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 111 EPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLN-----------IKLARQ 159
E + + +E+E +E+ L EEREK+R+ E++R+ E + K RQ
Sbjct: 1105 ERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQ 1164
Query: 160 LISKDLHDDDE---DEEMLETADGESMNTEESNQGSTPSDQQQNK 201
+ + +++E +EE L + E E Q + Q+ K
Sbjct: 1165 ELERQYREEEELQQEEEQLLREEQEKRRQERERQYREEEELQRQK 1209
Score = 32.0 bits (71), Expect = 0.38
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 110 LEPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDD 169
LE + R Q + EE D + E++RQ +KR+ E L +L R+ + + L ++
Sbjct: 558 LEQERREQRLKREQEERRDQLLKREEERRQQRLKRE--QEERLEQRLKREEVER-LEQEE 614
Query: 170 EDEEMLETADGESMNTEESNQGSTPSDQQQNKLR 203
E+ L+ + E ++ + +++Q +LR
Sbjct: 615 RREQRLKREEPEEERRQQLLKSEEQEERRQQQLR 648
Score = 32.0 bits (71), Expect = 0.38
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 111 EPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDE 170
E KYR E+E +E+ L EEREK+R+ E +R+ + L + QL+ ++
Sbjct: 987 EKKYR--EEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQ-QEEEQLLREEREKRRL 1043
Query: 171 DEEMLETADGESMNTEE 187
E + + E + EE
Sbjct: 1044 QERERQYREEEELQQEE 1060
Score = 31.2 bits (69), Expect = 0.64
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 111 EPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDE 170
E +YR E+E +E+ L EERE +R+ E++R+ E L + QL+ ++
Sbjct: 1047 ERQYR--EEEELQQEEEQLLGEERETRRRQELERQYRKEEELQ-QEEEQLLREEPEKRRR 1103
Query: 171 DEEMLETADGESMNTEE 187
E + + E + EE
Sbjct: 1104 QERERQCREEEELQQEE 1120
Score = 30.8 bits (68), Expect = 0.84
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 113 KYRIQEQESSGEEDSDLSPEEREKK--------RQFEMKRKLHYNEGLNIKLARQLISKD 164
K+R +EQ E+ LS +ER++K R+ E +RK +E +L RQ +
Sbjct: 1556 KFREEEQLRQEREEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQ---QLRRQEGQQQ 1612
Query: 165 LHDD-----DEDEEMLETADGESMNTEESNQ 190
L + EDE++L+ + + ++ +E ++
Sbjct: 1613 LRQERDRKFREDEQLLQEREEQQLHRQERDR 1643
Score = 30.0 bits (66), Expect = 1.4
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 111 EPKYRIQEQESSGEEDSDLSPEEREKK-RQFEMKRKLHYNEGLNIKLARQLISKDLHDDD 169
E + R EE+ LS +ER++K R+ E + + E ++ +QL +
Sbjct: 1405 EQQLRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERERKFLEEEQQLRQERHRKFR 1464
Query: 170 EDEEMLETADGESMNTEESNQGSTPSDQQ 198
E+E++L+ + + ++ +E ++ +QQ
Sbjct: 1465 EEEQLLQEREEQQLHRQERDRKFLEEEQQ 1493
Score = 29.3 bits (64), Expect = 2.4
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 109 GLEP-KYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHD 167
G EP K R QE+E E+ +L EE + R+ KR+ E RQ KD
Sbjct: 975 GEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWE-------RQYRKKDELQ 1027
Query: 168 DDEDEEMLETADGESMNTEESNQGSTPSDQQQNK 201
+E++ + E + + E QQ+ +
Sbjct: 1028 QEEEQLLREEREKRRLQERERQYREEEELQQEEE 1061
Score = 27.7 bits (60), Expect = 7.1
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 19/110 (17%)
Query: 108 EGLEPKYRIQEQESS-GEEDSDLSPEEREKK--------RQFEMKRKLHYNEGLNIKLA- 157
EG E + R QE++ EE+ L +ERE+K R+ E++RK E L +
Sbjct: 1678 EGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQ 1737
Query: 158 ---------RQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQ 198
R+++ ++ + +E+ L + + EE +QQ
Sbjct: 1738 EQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQ 1787
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 35.0 bits (79), Expect = 0.045
Identities = 16/94 (17%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 108 EGLEPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHD 167
E + +Y ++++ S ++R++ R F+ + K E +K ++ K+ +
Sbjct: 337 ESEDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEE--EMKKEEEMKKKEEKE 394
Query: 168 DDEDEEMLETADGESMNTEESNQGSTPSDQQQNK 201
++E+EEM + + E + + +G + ++ +++
Sbjct: 395 EEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDE 428
Score = 35.0 bits (79), Expect = 0.045
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 81 DDEDACSDTEATEAMAPDILAR-KLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQ 139
+DE+ S+ E EA + ++ + + + + +E+E +E+ EE+E++ +
Sbjct: 339 EDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEE 398
Query: 140 FEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESM---NTEES 188
EMK+K E N K + SKD ++DEDE+ + +GE TEE+
Sbjct: 399 EEMKQKEEEEEIRN-KNEEEGESKD--EEDEDEDGGQKPEGEPQQDPGTEET 447
Score = 27.7 bits (60), Expect = 7.1
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 132 EEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQ- 190
EE E K++ EMK+K E ++ ++ +++ + +E+E GES + E+ ++
Sbjct: 377 EEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEE-------GESKDEEDEDED 429
Query: 191 -GSTPSDQQQ 199
G P + Q
Sbjct: 430 GGQKPEGEPQ 439
>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
Length = 1219
Score = 34.7 bits (78), Expect = 0.058
Identities = 35/189 (18%), Positives = 74/189 (39%), Gaps = 32/189 (16%)
Query: 15 LKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPADKDYGLMKIDEPSTP 74
L+ T T + V AEQ + V EEL+ + + + + T H + M++ E
Sbjct: 620 LQTATENTQARVLHAEQEKAKVTEELAAATAQVSHLQLKMTAHQKKETELQMQLTE---- 675
Query: 75 YHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDSDLSPEER 134
D+L +L + ++ E + + E+ E+
Sbjct: 676 ------------------SLKETDLLRGQLTKVQA-----KLSELQETSEQAQSKFKSEK 712
Query: 135 EKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTP 194
+ ++Q E+K E ++++ ++ + K+L E ++A S EE ++
Sbjct: 713 QNRKQLELKVTSLEEELTDLRVEKESLEKNL-----SERKKKSAQERSQAEEEIDEIRKS 767
Query: 195 SDQQQNKLR 203
++ +KLR
Sbjct: 768 YQEELDKLR 776
>gi|11968150 GDNF-inducible zinc finger protein 1 [Homo sapiens]
Length = 711
Score = 34.3 bits (77), Expect = 0.076
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 21 TTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPADKDYGLMKIDEPSTPYHSMMG 80
++ S V++A PR +V + S D ++ +P ++ M D P +
Sbjct: 152 SSGSQVSAAPAPRASVATDGPHPSGLTDSLD-----YPGERASNGMSSDLPPKKSKDKLD 206
Query: 81 DDEDACSDTEATEAMAPDILARKLAAAEGLEPKY--RIQEQESSGEEDSD--LSPEEREK 136
++ A LA + E + KY R++EQ+ + E D P+++
Sbjct: 207 KKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKYTRRLREQQKTAEGDVGDYRCPQDQSP 266
Query: 137 KRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGE 181
R ++ NEG + +SK ++E+EE E +GE
Sbjct: 267 DRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEEEEEEEEDEEGE 311
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 33.9 bits (76), Expect = 0.099
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Query: 81 DDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQF 140
DDED D + E A K AAA ++ E ++D D + E+ +
Sbjct: 159 DDEDEDEDEDEIEPAA-----MKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMET 213
Query: 141 EMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQN 200
+ + + +K +D +DDEDE+ + D E + E+ + +++
Sbjct: 214 TPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPV 273
Query: 201 K 201
K
Sbjct: 274 K 274
>gi|189491776 nephrocystin 1 isoform 3 [Homo sapiens]
Length = 677
Score = 33.9 bits (76), Expect = 0.099
Identities = 24/120 (20%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 87 SDTEATEAMAPD----ILARKLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQFEM 142
S+++ EA+ P+ I R + + ++ ++ S +E + ++ + K+ + +
Sbjct: 29 SESQLKEALEPNKRQHIYQRCIQLKQAIDENKNALQKLSKADESAPVANYNQRKEEEHTL 88
Query: 143 KRKLHYN-EGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNK 201
KL +GL + ++R+ I+ ++ E+EE E+ D E EE + ++++N+
Sbjct: 89 LDKLTQQLQGLAVTISRENIT-EVGAPTEEEEESESEDSEDSGGEEEDAEEEEEEKEENE 147
>gi|189491774 nephrocystin 1 isoform 2 [Homo sapiens]
Length = 732
Score = 33.9 bits (76), Expect = 0.099
Identities = 24/120 (20%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 87 SDTEATEAMAPD----ILARKLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQFEM 142
S+++ EA+ P+ I R + + ++ ++ S +E + ++ + K+ + +
Sbjct: 29 SESQLKEALEPNKRQHIYQRCIQLKQAIDENKNALQKLSKADESAPVANYNQRKEEEHTL 88
Query: 143 KRKLHYN-EGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNK 201
KL +GL + ++R+ I+ ++ E+EE E+ D E EE + ++++N+
Sbjct: 89 LDKLTQQLQGLAVTISRENIT-EVGAPTEEEEESESEDSEDSGGEEEDAEEEEEEKEENE 147
>gi|46397398 nephrocystin 1 isoform 1 [Homo sapiens]
Length = 733
Score = 33.9 bits (76), Expect = 0.099
Identities = 24/120 (20%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 87 SDTEATEAMAPD----ILARKLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQFEM 142
S+++ EA+ P+ I R + + ++ ++ S +E + ++ + K+ + +
Sbjct: 29 SESQLKEALEPNKRQHIYQRCIQLKQAIDENKNALQKLSKADESAPVANYNQRKEEEHTL 88
Query: 143 KRKLHYN-EGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNK 201
KL +GL + ++R+ I+ ++ E+EE E+ D E EE + ++++N+
Sbjct: 89 LDKLTQQLQGLAVTISRENIT-EVGAPTEEEEESESEDSEDSGGEEEDAEEEEEEKEENE 147
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 33.9 bits (76), Expect = 0.099
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 20/167 (11%)
Query: 15 LKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPADKDYGLMKIDEPS-- 72
L K S MVA ++ + V+EEL K + + N L +D L KI S
Sbjct: 1136 LTGKISELERMVAELKKQKSRVEEELPKVREAAE--NELRKQQRNVEDISLQKIRAESEA 1193
Query: 73 ----TPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESS------ 122
+++ + E A + E + + A++ A E L +R Q +E++
Sbjct: 1194 KQYRRELETIVREKEAAERELERVRQLTIEAEAKRAAVEENL-LNFRNQLEENTFTRRTL 1252
Query: 123 ----GEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDL 165
+D L+ E++K + E R+ NE +KL +Q+ KDL
Sbjct: 1253 EDHLKRKDLSLNDLEQQKNKLMEELRRKRDNEEELLKLIKQM-EKDL 1298
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 33.9 bits (76), Expect = 0.099
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 78 MMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKK 137
++ D +D SD+E + A A + +E E + +E+E S E+S+ EE E++
Sbjct: 6 LLSDLQDI-SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEE 64
Query: 138 RQFEMKRKLHYNEGLNIKLARQLISKDLHDDDED------EEMLETADGESMNTEESNQG 191
+ +E +++ + +S+D ++E+ E + GES EE
Sbjct: 65 EEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGE 124
Query: 192 STP 194
TP
Sbjct: 125 GTP 127
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 33.9 bits (76), Expect = 0.099
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 81 DDEDACSDTEATEAMA--PDILARKLAAAEGLEPK-YRIQEQESSGEEDSDLSPEEREKK 137
D+ED S+ E MA P LA++ G+ + R E +S GEED S E ++
Sbjct: 988 DEEDEESERERDRDMADTPCELAKRDPKGVGVRRRPARPLELDSGGEEDEKESLSEEQES 1047
Query: 138 RQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQGSTPSDQ 197
+ E + + E D DD +D + E D ++ +E S + SD+
Sbjct: 1048 TEEEEEAEEEEEE-----------EDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDE 1096
Query: 198 QQ 199
++
Sbjct: 1097 EE 1098
>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
Length = 732
Score = 33.9 bits (76), Expect = 0.099
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 88 DTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLH 147
+ E E D L R+ + E + R++E+ EE+ EE +KK++ E KRK
Sbjct: 419 EQERVEKEEQDRLEREELKRKAEEERLRLEEEARKQEEERK-RQEEEKKKQEGEEKRKA- 476
Query: 148 YNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTE 186
E K +L+ K+ + ++ E+ + E+ T+
Sbjct: 477 -GEEAKRKAEEELLLKEKQEQEKQEKAMIEKQKEAAETK 514
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 33.5 bits (75), Expect = 0.13
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 33 RGNVDEELSKKSQKWDEMNILATYHPADKDYGLMKIDEPSTPYHSMMGDDEDACS--DTE 90
RG V E+L+ +QKWD + T +D+ + + ST Y S++ D S D +
Sbjct: 2646 RGIVKEQLAAVTQKWDSL----TGQLSDRCDWIDQAIVKSTQYQSLLRSLSDKLSDLDNK 2701
Query: 91 ATEAMA----PDILARKLAAAEGLEPKYRIQEQESSGEED--SDLSPEEREKKRQFEMKR 144
+ ++A PD + ++L A+ ++ + + ++++ + DLS +E+ + E+ R
Sbjct: 2702 LSSSLAVSTHPDAMNQQLETAQKMKQEIQQEKKQIKVAQALCEDLSALVKEEYLKAELSR 2761
Query: 145 KL 146
+L
Sbjct: 2762 QL 2763
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 129 LSPEEREKKRQFEMKRKLHYNEGL-----NIKLARQL---ISKDLHDDDEDEEMLETADG 180
LSPEE+EK ++ + K+HY L +KL L + K D E E L+ ++
Sbjct: 1828 LSPEEKEKLQKNMKELKVHYETALAESEKKMKLTHSLQEELEKFDADYTEFEHWLQQSEQ 1887
Query: 181 ESMNTE 186
E N E
Sbjct: 1888 ELENLE 1893
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 33.5 bits (75), Expect = 0.13
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 33 RGNVDEELSKKSQKWDEMNILATYHPADKDYGLMKIDEPSTPYHSMMGDDEDACS--DTE 90
RG V E+L+ +QKWD + T +D+ + + ST Y S++ D S D +
Sbjct: 2657 RGIVKEQLAAVTQKWDSL----TGQLSDRCDWIDQAIVKSTQYQSLLRSLSDKLSDLDNK 2712
Query: 91 ATEAMA----PDILARKLAAAEGLEPKYRIQEQESSGEED--SDLSPEEREKKRQFEMKR 144
+ ++A PD + ++L A+ ++ + + ++++ + DLS +E+ + E+ R
Sbjct: 2713 LSSSLAVSTHPDAMNQQLETAQKMKQEIQQEKKQIKVAQALCEDLSALVKEEYLKAELSR 2772
Query: 145 KL 146
+L
Sbjct: 2773 QL 2774
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 129 LSPEEREKKRQFEMKRKLHYNEGL-----NIKLARQL---ISKDLHDDDEDEEMLETADG 180
LSPEE+EK ++ + K+HY L +KL L + K D E E L+ ++
Sbjct: 1839 LSPEEKEKLQKNMKELKVHYETALAESEKKMKLTHSLQEELEKFDADYTEFEHWLQQSEQ 1898
Query: 181 ESMNTE 186
E N E
Sbjct: 1899 ELENLE 1904
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.303 0.121 0.324
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,825,335
Number of Sequences: 37866
Number of extensions: 355315
Number of successful extensions: 2545
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 2068
Number of HSP's gapped (non-prelim): 583
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.