TMEM130 11433

Name: TMEM130	Sequence: fasta or formatted (435aa)		NCBI GI: 197313779
Description: transmembrane protein 130 isoform a		Not currently referenced in the text
Other entries for this name: alt prot {321aa} transmembrane protein 130 isoform c alt prot {423aa} transmembrane protein 130 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 31 2 C cysteine 3.0 13 3 D aspartate 3.9 17 1 E glutamate 4.8 21 2 F phenylalanine 4.6 20 1 G glycine 5.3 23 1 H histidine 2.3 10 1 I isoleucine 3.9 17 2 K lysine 4.4 19 1 L leucine 11.0 48 2 M methionine 2.5 11 1 N asparagine 2.5 11 1 P proline 7.1 31 2 Q glutamine 3.4 15 2 R arginine 3.2 14 1 S serine 6.7 29 2 T threonine 8.7 38 2 V valine 9.7 42 2 W tryptophan 2.5 11 1 Y tyrosine 3.2 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 130 isoform a TMEM130 0.961 transmembrane protein 130 isoform b TMEM130 0.657 transmembrane protein 130 isoform c GPNMB 0.029 glycoprotein (transmembrane) nmb isoform b precursor ... GPNMB 0.024 glycoprotein (transmembrane) nmb isoform a precursor... SILV 0.017 silver homolog PKD1 0.015 polycystin 1 isoform 2 precursor PKD1 0.015 polycystin 1 isoform 1 precursor CHD7 0.009 chromodomain helicase DNA binding protein 7 MAP4K1 0.006 mitogen-activated protein kinase kinase kinase kinase... PKD1L2 0.006 polycystin 1-like 2 isoform c PKD1L2 0.006 polycystin 1-like 2 isoform a SLC10A4 0.006 solute carrier family 10, member 4 C4orf41 0.006 hypothetical protein LOC60684 isoform b C4orf41 0.006 hypothetical protein LOC60684 isoform a IGSF22 0.005 immunoglobulin superfamily, member 22 CHL1 0.005 cell adhesion molecule with homology to L1CAM precur... CD200R1L 0.005 CD200 cell surface glycoprotein receptor 2 GSC2 0.005 goosecoid homeobox 2 PKD1L1 0.005 polycystin-1L1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.