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Search of human proteins with 52627149
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|52627149 telomeric repeat binding factor 2, interacting
protein [Homo sapiens]
(399 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|52627149 telomeric repeat binding factor 2, interacting prote... 793 0.0
gi|17975763 myelin transcription factor 1 [Homo sapiens] 47 4e-05
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 45 1e-04
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 45 1e-04
gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo ... 45 1e-04
gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo ... 45 1e-04
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 45 2e-04
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 44 3e-04
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 43 6e-04
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 43 6e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 42 7e-04
gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo sapi... 42 0.001
gi|30795188 Williams Beuren syndrome chromosome region 19 protei... 42 0.001
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 42 0.001
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 42 0.001
gi|194595492 speedy homolog E5 [Homo sapiens] 42 0.001
gi|226246595 speedy homolog E6 [Homo sapiens] 41 0.002
gi|239743297 PREDICTED: speedy homolog E6 [Homo sapiens] 41 0.002
gi|239508980 PREDICTED: speedy homolog E6 (Xenopus laevis) [Homo... 41 0.002
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 41 0.002
gi|55956788 nucleolin [Homo sapiens] 41 0.002
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 41 0.002
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa... 41 0.002
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 40 0.003
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 40 0.003
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 40 0.003
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens] 40 0.003
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 40 0.004
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 40 0.004
gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo ... 40 0.005
>gi|52627149 telomeric repeat binding factor 2, interacting protein
[Homo sapiens]
Length = 399
Score = 793 bits (2048), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MAEAMDLGKDPNGPTHSSTLFVRDDGSSMSFYVRPSPAKRRLSTLILHGGGTVCRVQEPG 60
MAEAMDLGKDPNGPTHSSTLFVRDDGSSMSFYVRPSPAKRRLSTLILHGGGTVCRVQEPG
Sbjct: 1 MAEAMDLGKDPNGPTHSSTLFVRDDGSSMSFYVRPSPAKRRLSTLILHGGGTVCRVQEPG 60
Query: 61 AVLLAQPGEALAEASGDFISTQYILDCVERNERLELEAYRLGPASAADTGSEAKPGALAE 120
AVLLAQPGEALAEASGDFISTQYILDCVERNERLELEAYRLGPASAADTGSEAKPGALAE
Sbjct: 61 AVLLAQPGEALAEASGDFISTQYILDCVERNERLELEAYRLGPASAADTGSEAKPGALAE 120
Query: 121 GAAEPEPQRHAGRIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSL 180
GAAEPEPQRHAGRIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSL
Sbjct: 121 GAAEPEPQRHAGRIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSL 180
Query: 181 KDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVK 240
KDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVK
Sbjct: 181 KDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVK 240
Query: 241 EEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEE 300
EEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEE
Sbjct: 241 EEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEE 300
Query: 301 EEEEKVSQPEVGAAIKIIRQLMEKFNLDLSTVTQAFLKNSGELEATSAFLASGQRADGYP 360
EEEEKVSQPEVGAAIKIIRQLMEKFNLDLSTVTQAFLKNSGELEATSAFLASGQRADGYP
Sbjct: 301 EEEEKVSQPEVGAAIKIIRQLMEKFNLDLSTVTQAFLKNSGELEATSAFLASGQRADGYP 360
Query: 361 IWSRQDDIDLQKDDEDTREALVKKFGAQNVARRIEFRKK 399
IWSRQDDIDLQKDDEDTREALVKKFGAQNVARRIEFRKK
Sbjct: 361 IWSRQDDIDLQKDDEDTREALVKKFGAQNVARRIEFRKK 399
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 46.6 bits (109), Expect = 4e-05
Identities = 55/262 (20%), Positives = 103/262 (39%), Gaps = 46/262 (17%)
Query: 68 GEALAEASGDFISTQYILDCVERNERLELEAYRLGPASAADTGSEAKPGA--------LA 119
G A A + G + S Q I+ L L D G AKPG A
Sbjct: 147 GSATASSKGSYSSYQGII----ATSLLNLGQIAEETLVEEDLGQAAKPGPGIVHLLQEAA 202
Query: 120 EGAAEPEPQRHAGRIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQS 179
EGAA E ++ I DA++V +T + P S+ A ++ ++ + H +
Sbjct: 203 EGAASEEGEKGLF-IQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEED 261
Query: 180 LKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYV 239
++ ++ + + EED E + E + + + EEE
Sbjct: 262 EEE------------------------EEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 297
Query: 240 KEEIQENEEAVKKMLVE------ATREFEEVVVDESP---PDFEIHITMCDDDPPTPEED 290
+EE +E EEA ++ + + ++ E+ ESP P++ + + + DD +
Sbjct: 298 EEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTH 357
Query: 291 SETQPDEEEEEEEEKVSQPEVG 312
S +E E ++ +++ +G
Sbjct: 358 SRKSTVTDESEMQDMMTRGNLG 379
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 45.1 bits (105), Expect = 1e-04
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 149 KENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQK 208
K+N +P G+ K S S +S K RY L HK + D S +K
Sbjct: 1267 KQNEENP----GDEEAKNQVNSESDSDSEESKKPRYRHRLL--RHKLTVSDGE-SGEEKK 1319
Query: 209 LKRKAEEDPEAADSGEPQNKRTPDLP-EEEYVKEEIQENEE--------AVKKMLVEATR 259
K K ++ + + + ++ + D +E V EE+ E+E+ A K L E R
Sbjct: 1320 TKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQR 1379
Query: 260 EFEEV-------VVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVG 312
+++ V ++S + + + +++ EE+ E + +EEEEEE+E G
Sbjct: 1380 SYKQKKKRRRIKVQEDSSSENKSN---SEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPG 1436
Query: 313 AAIKIIRQLMEKFNLDLSTVTQAFLKNSGE 342
K IR++++ + L T TQ LK E
Sbjct: 1437 KGRKKIRKILK--DDKLRTETQNALKEEEE 1464
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 45.1 bits (105), Expect = 1e-04
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 149 KENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQK 208
K+N +P G+ K S S +S K RY L HK + D S +K
Sbjct: 1305 KQNEENP----GDEEAKNQVNSESDSDSEESKKPRYRHRLL--RHKLTVSDGE-SGEEKK 1357
Query: 209 LKRKAEEDPEAADSGEPQNKRTPDLP-EEEYVKEEIQENEE--------AVKKMLVEATR 259
K K ++ + + + ++ + D +E V EE+ E+E+ A K L E R
Sbjct: 1358 TKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQR 1417
Query: 260 EFEEV-------VVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVG 312
+++ V ++S + + + +++ EE+ E + +EEEEEE+E G
Sbjct: 1418 SYKQKKKRRRIKVQEDSSSENKSN---SEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPG 1474
Query: 313 AAIKIIRQLMEKFNLDLSTVTQAFLKNSGE 342
K IR++++ + L T TQ LK E
Sbjct: 1475 KGRKKIRKILK--DDKLRTETQNALKEEEE 1502
>gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo
sapiens]
Length = 788
Score = 45.1 bits (105), Expect = 1e-04
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 13/207 (6%)
Query: 150 ENARSPSSVTGNAL---------WKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDA 200
E AR + V GNAL + E SL +++ ++ + + LR Q + +
Sbjct: 97 ELARMENGVLGNALEGVHVEEEEGEKTEDESLVENN-DNIDEEAREELREQVYDAMGEKE 155
Query: 201 PVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATRE 260
+ K K E D E E + D+ + EE QE + L E + E
Sbjct: 156 EAKKTEDKSLAKPETDKEQDSEMEKGGREDMDISKSA---EEPQEKVDLTLDWLTETSEE 212
Query: 261 FEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQ 320
+ E P + E+ + + P EE+ + +EE EK Q + G I I +
Sbjct: 213 AKGGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECREKGGQEKQGEVIVSIEE 272
Query: 321 LMEKFNLDLSTVTQAFLKNSGELEATS 347
++ + + VT + E+EA S
Sbjct: 273 KPKEVSEEQPVVTLEKQGTAVEVEAES 299
Score = 28.9 bits (63), Expect = 8.6
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 196 LLGD-APVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKML 254
++GD P+ P + + +D SG + R +P +E K ++E+E A +
Sbjct: 385 VVGDQTPIEPQTSIERLTETKD----GSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVD 440
Query: 255 VEATREFEEVVVDESPPDFEIHITMCDDDPPTPE---EDSETQPDEEEEEEEEKVSQ 308
+ + E P+ ++ I ++ E E ET+ EE+++E +K +
Sbjct: 441 TKVAQG-----ATEKSPEDKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEE 492
>gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo
sapiens]
Length = 790
Score = 45.1 bits (105), Expect = 1e-04
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 13/207 (6%)
Query: 150 ENARSPSSVTGNAL---------WKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDA 200
E AR + V GNAL + E SL +++ ++ + + LR Q + +
Sbjct: 99 ELARMENGVLGNALEGVHVEEEEGEKTEDESLVENN-DNIDEEAREELREQVYDAMGEKE 157
Query: 201 PVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATRE 260
+ K K E D E E + D+ + EE QE + L E + E
Sbjct: 158 EAKKTEDKSLAKPETDKEQDSEMEKGGREDMDISKSA---EEPQEKVDLTLDWLTETSEE 214
Query: 261 FEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQ 320
+ E P + E+ + + P EE+ + +EE EK Q + G I I +
Sbjct: 215 AKGGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECREKGGQEKQGEVIVSIEE 274
Query: 321 LMEKFNLDLSTVTQAFLKNSGELEATS 347
++ + + VT + E+EA S
Sbjct: 275 KPKEVSEEQPVVTLEKQGTAVEVEAES 301
Score = 28.9 bits (63), Expect = 8.6
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 196 LLGD-APVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKML 254
++GD P+ P + + +D SG + R +P +E K ++E+E A +
Sbjct: 387 VVGDQTPIEPQTSIERLTETKD----GSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVD 442
Query: 255 VEATREFEEVVVDESPPDFEIHITMCDDDPPTPE---EDSETQPDEEEEEEEEKVSQ 308
+ + E P+ ++ I ++ E E ET+ EE+++E +K +
Sbjct: 443 TKVAQG-----ATEKSPEDKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEE 494
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 44.7 bits (104), Expect = 2e-04
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 22/170 (12%)
Query: 148 VKENAR-SPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSS 206
+KE ++ +P + +W K L++ W+ K+R + + Y + P+ P
Sbjct: 1231 LKEGSKDNPEPLKCKQVWPKGTKRGLSK--WRQNKERKTGF---KLNLYTPPETPMEPDE 1285
Query: 207 QKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVV 266
Q + +E E S P ++EE++E EA +L + EE
Sbjct: 1286 QVTVEEQKETSEGKTSPSPIR-----------IEEEVKETGEA---LLPQEENRREETCA 1331
Query: 267 DESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIK 316
SP +DD PEE+ E + +EEEEEEEE+ + E G ++
Sbjct: 1332 PVSPNTSPGEKP--EDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVE 1379
Score = 37.4 bits (85), Expect = 0.024
Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 20/162 (12%)
Query: 204 PSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEE 263
PS + +ED +S E + + +LP E + +E+ EN+E + V+ E
Sbjct: 1418 PSHNEDHDADDEDDSHMESAEVEKE---ELPRESF--KEVLENQETFLDLNVQPGHSNPE 1472
Query: 264 VVVD---------ESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAA 314
V++D S P + D PE D E P E+ +++++K S+ EV
Sbjct: 1473 VLMDCGVDLTASCNSEPK-----ELAGDPEAVPESDEEPPPGEQAQKQDQKNSK-EVDTE 1526
Query: 315 IKIIRQLMEKFNLDLSTVTQAFLKNSGELEATSAFLASGQRA 356
K + + + Q+ + S E + T A Q A
Sbjct: 1527 FKEGNPATMEIDSETVQAVQSLTQESSEQDDTFQDCAETQEA 1568
Score = 36.2 bits (82), Expect = 0.054
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 207 QKLKRKAEEDPEAADSGEPQNKRTPDL--PEEEYVKEEIQENEEAVKKMLVEATREFEEV 264
Q+ R+ E + + P K DL PEEE +EE +E EE E E E
Sbjct: 1321 QEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEE-----EEGEEEEGG 1375
Query: 265 VVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEK 305
E PD + + T +EDS D EEEEEE++
Sbjct: 1376 GNVEKDPDGAKSQEKEEPEISTEKEDSARLDDHEEEEEEDE 1416
Score = 34.7 bits (78), Expect = 0.16
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 25/127 (19%)
Query: 196 LLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKR-------TPDLPEEEYVKEEIQENEE 248
L+ +A VS ++ +++AE E A E + + + P + K + + E
Sbjct: 991 LISNAAVSEEEREAEKEAERLMEQASCWEKEEQEILSTRANSRQSPAKVQSKNKYLHSPE 1050
Query: 249 A-----VKKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEE 303
+ + L+E ++E E +E +D EE+ E + DEEEEEEE
Sbjct: 1051 SRPVTGERGQLLELSKESSEEEEEE-------------EDEEEEEEEEEEEEDEEEEEEE 1097
Query: 304 EKVSQPE 310
E+ + E
Sbjct: 1098 EEEEEEE 1104
Score = 31.6 bits (70), Expect = 1.3
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 200 APVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEA-- 257
APVSP++ E PE D +P+ + + EEE +EE E EE + +
Sbjct: 1331 APVSPNTSP-----GEKPED-DLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDG 1384
Query: 258 --TREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPE 310
++E EE + D DD EED E +E+ + ++E S E
Sbjct: 1385 AKSQEKEEPEISTEKEDS----ARLDDHEEEEEEDEEPSHNEDHDADDEDDSHME 1435
Score = 29.6 bits (65), Expect = 5.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 210 KRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVK 251
K +EE+ E D E + + + EEE +EE +E EE ++
Sbjct: 1066 KESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQ 1107
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 43.9 bits (102), Expect = 3e-04
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 163 LWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADS 222
+W+ EK + W+ K + QE K + + +K+ R+ E+ E +
Sbjct: 546 MWREEEKMHEQEKIWEEEKRQE------QEDKMWRQEEKIREQEEKVWRQEEKIREQEEK 599
Query: 223 GEPQNKRTPDLPEEEYVKEE---IQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITM 279
+ Q ++ +EE ++E+ IQE EE +++ E RE EE+ ++ E M
Sbjct: 600 RQEQEEKM--WKQEEKIREQEEKIQEQEEKIREQ-EEKIREQEEMTQEQEEKMGEQEEKM 656
Query: 280 CDDDPPTPEEDSETQPDEEEEEEEEK 305
C+ + E++ EE+ E+EK
Sbjct: 657 CEQEEKMQEQEETMWRQEEKIREQEK 682
Score = 41.6 bits (96), Expect = 0.001
Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 163 LWKAMEKSSLTQHSWQSLKDRYLKH---LRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEA 219
+W+ EK + Q +++ K +R QE K + + +K++ + E E
Sbjct: 586 VWRQEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQ 645
Query: 220 ADS-GEPQNK---RTPDLPEEEYV----KEEIQENEEAVKKMLVEATREFEEVVVDESPP 271
+ GE + K + + E+E +E+I+E E+ +++ E RE EE++ ++
Sbjct: 646 EEKMGEQEEKMCEQEEKMQEQEETMWRQEEKIREQEKKIREQ-EEKIREQEEMMQEQEEK 704
Query: 272 DFEIHITMCDDDPPTPEEDSETQPDEEEEEEEE 304
+E MC+ + E++ + + EE+ E+E
Sbjct: 705 MWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQE 737
Score = 32.7 bits (73), Expect = 0.59
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 16/161 (9%)
Query: 151 NARSPSSVTGNALWKAMEKSSLTQHSWQSLK-DRYLKHLRGQEHKYLLGDAPVSPSSQKL 209
+A+ + V N LW + + + Q K + + ++ QE K + + +K+
Sbjct: 278 SAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKM 337
Query: 210 KRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDES 269
+R+ E E + Q E + KEE +E + E R EE++ ++
Sbjct: 338 RRQEEMMWEKEEKMRRQE-------EMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKE 390
Query: 270 PPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPE 310
E+ M E + + EE+ +EEEK+ + E
Sbjct: 391 EKIRELEEKM--------HEQEKIREQEEKRQEEEKIREQE 423
Score = 30.0 bits (66), Expect = 3.8
Identities = 30/151 (19%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 163 LWKAMEKSSLTQHS-WQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAAD 221
+W+ EK + W+ K+ ++ L + H+ ++ + K +E+ + +
Sbjct: 372 MWEKEEKMRRQEEMMWE--KEEKIRELEEKMHE--------QEKIREQEEKRQEEEKIRE 421
Query: 222 SGEPQNKRTPDLPEEEYVKEEIQENEEAVKKM--LVEATREFEEVVVDESPPDFEIHITM 279
+ Q + +EE ++E+ ++ E KKM E E E++ +E + E M
Sbjct: 422 QEKRQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQE---EM 478
Query: 280 CDDDPPTPEEDSETQPDEEEEEEEEKVSQPE 310
+ E++ + E+ E+EEK+ + E
Sbjct: 479 WRQEEKIHEQEEIWRQKEKMHEQEEKIRKQE 509
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 42.7 bits (99), Expect = 6e-04
Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 36/174 (20%)
Query: 190 GQEHKYLLGDAPVSPSSQKLKRKAEE-----DPEAADSGEPQNKRTPDLPEEEYVKEEIQ 244
G E L D S SSQ K + D E SG + EEE V+E+++
Sbjct: 151 GSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVE 210
Query: 245 ENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEE 304
E+EE V+E ++D E+ E + +EEEEEEEE
Sbjct: 211 EDEE-----------------VEED----------AEEDEEVDEDGEEEEEEEEEEEEEE 243
Query: 305 KVSQPEVGAAIKIIRQLMEKFNLDLSTVTQAFLKNSGELEATSAFLASGQRADG 358
+ + E + R E+ N D T ++A S + T + SG DG
Sbjct: 244 EEEEEEYE---QDERDQKEEGN-DYDTRSEASDSGSESVSFTDGSVRSGSGTDG 293
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 42.7 bits (99), Expect = 6e-04
Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 36/174 (20%)
Query: 190 GQEHKYLLGDAPVSPSSQKLKRKAEE-----DPEAADSGEPQNKRTPDLPEEEYVKEEIQ 244
G E L D S SSQ K + D E SG + EEE V+E+++
Sbjct: 151 GSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVE 210
Query: 245 ENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEE 304
E+EE V+E ++D E+ E + +EEEEEEEE
Sbjct: 211 EDEE-----------------VEED----------AEEDEEVDEDGEEEEEEEEEEEEEE 243
Query: 305 KVSQPEVGAAIKIIRQLMEKFNLDLSTVTQAFLKNSGELEATSAFLASGQRADG 358
+ + E + R E+ N D T ++A S + T + SG DG
Sbjct: 244 EEEEEEYE---QDERDQKEEGN-DYDTRSEASDSGSESVSFTDGSVRSGSGTDG 293
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 42.4 bits (98), Expect = 7e-04
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 31/188 (16%)
Query: 148 VKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQ 207
VKE A+SP K+ EK+ K + R K+ + SP +
Sbjct: 740 VKEEAKSPEKA------KSPEKAKTLDVKSPEAKTPAKEEARSPADKF--PEKAKSPVKE 791
Query: 208 KLKRKAEEDPEAADSGEPQNKRTPD--LPEEEYVKEEIQENEEAVKKMLVEATREFEEVV 265
++K PE A S ++ + P+ +P++E VK ++E E+ + + E ++ EE
Sbjct: 792 EVK-----SPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEK 846
Query: 266 VDESPPDFEIHITMCDDDP----PTPEEDSETQP------------DEEEEEEEEKVSQP 309
+P E + ++ P P P+ + + +P +EE E+++KV P
Sbjct: 847 APATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTP 906
Query: 310 EVGAAIKI 317
E A K+
Sbjct: 907 EKEAPAKV 914
Score = 39.3 bits (90), Expect = 0.006
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 14/216 (6%)
Query: 107 ADTGSEAKPGALAEGAAEPEPQRHAGRIAFTDADDVAILTYVKENARSPSSVTGNALWKA 166
A T +AK + E A PE + + D T KE ARSP+
Sbjct: 730 AKTPEKAK-SPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSP 788
Query: 167 MEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVS----PSSQKLK---RKAEED--P 217
+++ + +S K + K +PV P K+K +KAEE+ P
Sbjct: 789 VKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAP 848
Query: 218 EAADSGEPQNKRTPDLPEEEYVKEEIQENEEAV----KKMLVEATREFEEVVVDESPPDF 273
+ E ++ + + P++E K +++E +E K+ VEA +E E P+
Sbjct: 849 ATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEK 908
Query: 274 EIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQP 309
E + + P+E +E E ++ + ++ S+P
Sbjct: 909 EAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKP 944
Score = 39.3 bits (90), Expect = 0.006
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 200 APVSPSSQKLKRKAEEDPEAADSGEP--QNKRTP--DLPEEEYVKEEIQENEEAVKKMLV 255
AP +P +++ K +E+ ++ +P + K+ P + P+E V+ + +E E+ K
Sbjct: 847 APATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTP 906
Query: 256 EATREFEEVVVDESPPDFEIHITMCDDD------PPTPEEDSETQPDEEEEEEEEKVSQP 309
E + V +++ P + + + D P P E E P E+++ +EEK +P
Sbjct: 907 EKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAP-EKKDTKEEKAKKP 965
Query: 310 E 310
E
Sbjct: 966 E 966
Score = 38.1 bits (87), Expect = 0.014
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 184 YLKHLRGQEHKYLLGDAPVS--------PS-SQKLKRKAEEDPEAADSGEPQNKRTPDLP 234
Y K L G+E + G P S PS S +K K+EE + + E + +
Sbjct: 402 YRKLLEGEECRIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQT 461
Query: 235 EEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQ 294
EE V EE+ E EE K+ E +E E +E+ E + ++ +PE+++++
Sbjct: 462 EETQVTEEVTEEEE--KEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKS- 518
Query: 295 PDEEEEEEEEKVSQPE 310
P +EE + + PE
Sbjct: 519 PVKEEAKSPAEAKSPE 534
>gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo
sapiens]
Length = 631
Score = 42.0 bits (97), Expect = 0.001
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 218 EAADSGEPQNKRTPDLP-EEEYVKEEIQ-ENEEAVKKMLVEATREFEEVVVDESPPDFEI 275
++ D G P + T + ++E E+I+ E+ E + L+ F +V E + E
Sbjct: 56 DSRDGGFPNDASTENRSSDQESASEDIELESLEDFEHFLMSGESLFHYPLVGEEETEREE 115
Query: 276 HITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVG 312
++ EE+ E + +EEEEEEEE+ QP G
Sbjct: 116 EDEEIQEEGGEEEEEEEEEEEEEEEEEEEEEEQPRAG 152
>gi|30795188 Williams Beuren syndrome chromosome region 19 protein
[Homo sapiens]
Length = 336
Score = 42.0 bits (97), Expect = 0.001
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 56/240 (23%)
Query: 203 SPSSQKL--KRKAEEDPEAADSGEPQNKRTPDLPEEEYVKE-----EIQENEEAVKKMLV 255
SP + L KRK E E+ + EP+ + P+ PEE +V E +++ ++ V +L+
Sbjct: 20 SPPCRSLGWKRKREWSDESEE--EPEKELAPE-PEETWVVETLCGLKMKLKQQRVSPILL 76
Query: 256 EATREFEEVV---VDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPE-- 310
E ++F + VD SPP H + C + EE EEE KV PE
Sbjct: 77 EHHKDFNSQLAPGVDPSPP----HRSFC-----WKRKMEWWDKSEESEEEPRKVLAPEPE 127
Query: 311 --------VGAAIKIIRQLM--------EKFNLDLST-VTQAFLKNSGELEATSAFL--- 350
G +K+ R+ + E FN L V + FL +L + +L
Sbjct: 128 EIWVAEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAM 187
Query: 351 --ASGQRADGYPIWSRQD---------DIDLQKDDEDTREALVKKFGAQNVARRIEFRKK 399
A RA G+P W Q D+++DDED+++ + +N +R RK+
Sbjct: 188 VIAYFSRA-GFPSWQYQRLHFFLALYLANDMEEDDEDSKQNIFHFLYGKNRSRIPLLRKR 246
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 42.0 bits (97), Expect = 0.001
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 207 QKLKRKAEEDPEAADSGEPQNKRTPDLPEE----EYVKEEIQENE-------EAVKKMLV 255
Q+++ K EE+ E +S + Q+ + ++ + E VK I + E E+V+
Sbjct: 360 QEMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVENVKHVIADQEVMETNRVESVEPSEN 419
Query: 256 EATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPE 310
EA++E E + E PD E C P E S ++E EE+EEK S+P+
Sbjct: 420 EASKELEPEMEFEIEPDKE-----CKSLSPGKENVSALDMEKESEEKEEKESEPQ 469
Score = 33.9 bits (76), Expect = 0.27
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 27/157 (17%)
Query: 174 QHSWQSLKDRYLKHLRGQEHKYLLG-DAPVSPSSQKLKRKAEEDPEAADSG------EPQ 226
Q W + +K++R + +L + P++QKL +++ A G E
Sbjct: 219 QEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQI 278
Query: 227 NK-----RTPDLPEEEY--VKEEIQENEEAVKKM------LVEATREFEEVVVDESPPDF 273
NK R + E+E+ V+ E Q+ E+ K+ L E + +V ++E+ +
Sbjct: 279 NKMEARPRRQSMKEKEHQVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEE 338
Query: 274 EIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPE 310
E I + D+E + +EEE+++E +V E
Sbjct: 339 EKEIAIV-------HSDAEKEQEEEEQKQEMEVKMEE 368
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 42.0 bits (97), Expect = 0.001
Identities = 45/184 (24%), Positives = 69/184 (37%), Gaps = 43/184 (23%)
Query: 218 EAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFE--- 274
E + G P+ + TP E E E ++ E+A ++E + DE E
Sbjct: 474 EVMEQGVPEKEETPPPVEPE----EEEDTEDA-------GLDDWEAMASDEETEKVEGNK 522
Query: 275 IHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQLMEKFNLDLSTVTQ 334
+HI + ++ EE+ E + DEE EEEEE+ + E
Sbjct: 523 VHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGS---------------------- 560
Query: 335 AFLKNSGELEATSAFLASGQRADGYPIWSRQDDIDLQKDDEDTREALVKKFGAQNVARRI 394
+ E E S SG+ D P D + DD+ T+E + RRI
Sbjct: 561 ---EGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKE----ERAYDKAKRRI 613
Query: 395 EFRK 398
E R+
Sbjct: 614 EKRR 617
Score = 33.5 bits (75), Expect = 0.35
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 206 SQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVV 265
+QK K E + + D + + ++ + E E K++ + +E+ +K E + V
Sbjct: 229 AQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVD 288
Query: 266 VDESPPDFEIHITMC----DDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQL 321
P E T D++ ++D + + E+EE+E+EK P A +K +++
Sbjct: 289 TGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPS-KATVKAMQEA 347
Query: 322 MEKFNLDLSTVTQAFLKNSGELEATSAFLASGQRADGYPIWSRQDDIDLQKDDEDTREAL 381
+ K + + + LE A +R + Q+ + +K E R+
Sbjct: 348 LAKLKEEEERQKREEEERIKRLEELEAKRKEEERLE-------QEKRERKKQKEKERKER 400
Query: 382 VKKFG 386
+KK G
Sbjct: 401 LKKEG 405
Score = 29.3 bits (64), Expect = 6.6
Identities = 20/93 (21%), Positives = 44/93 (47%)
Query: 213 AEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPD 272
++E+ E + + + + EEE +EE +E+EE+ ++ E E E ++
Sbjct: 511 SDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVS 570
Query: 273 FEIHITMCDDDPPTPEEDSETQPDEEEEEEEEK 305
E D P+ E S+++ D +++ +E+
Sbjct: 571 DEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEE 603
>gi|194595492 speedy homolog E5 [Homo sapiens]
Length = 337
Score = 41.6 bits (96), Expect = 0.001
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 47/236 (19%)
Query: 203 SPSSQKL--KRKAEEDPEAADSGEPQNKRTPDLPEEEYVKE-----EIQENEEAVKKMLV 255
SP + L KRK E E+A+ EP+ + P+ PEE +V E +++ ++ V +L
Sbjct: 20 SPPCRSLGWKRKREWSDESAE--EPEKELAPE-PEETWVVEMLCGLKMKLKQQRVSPILP 76
Query: 256 EATREFEEVV---VDESPPDFEIHITMCDDDPPTPEEDSETQPDEEE------EEEEEKV 306
E + F + VD SPP H + C ++SE +EE E EE V
Sbjct: 77 EHHKGFNSQLAPGVDPSPP----HRSFCWKRKMEWWDESEESLEEEPRKVLAPEPEEIWV 132
Query: 307 SQPEVGAAIKIIRQLM--------EKFNLDLST-VTQAFLKNSGELEATSAFL-----AS 352
++ G +K+ R+ + E FN L V + FL +L + +L A
Sbjct: 133 AEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAY 192
Query: 353 GQRADGYPIWSRQD---------DIDLQKDDEDTREALVKKFGAQNVARRIEFRKK 399
RA G+P W Q D+++DDED+++ + +N +R RK+
Sbjct: 193 FSRA-GFPSWQYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYGKNRSRIPLLRKR 247
>gi|226246595 speedy homolog E6 [Homo sapiens]
Length = 402
Score = 41.2 bits (95), Expect = 0.002
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 47/236 (19%)
Query: 203 SPSSQKL--KRKAEEDPEAADSGEPQNKRTPDLPEEEYVKE-----EIQENEEAVKKMLV 255
SP + L KRK E E+ + EP+ + P+ PEE +V E +++ ++ V +L
Sbjct: 60 SPPCRSLGWKRKREWSDESEE--EPEKELAPE-PEETWVVEMLCGLKMKLKQQRVSSILP 116
Query: 256 EATREFEEVV---VDESPPDFEIHITMCDDDPPTPEEDSETQPDEEE------EEEEEKV 306
E ++F + VD SPP H + C ++SE +EE E EE V
Sbjct: 117 EHHKDFNSQLAPGVDPSPP----HRSFCWKRKMEWWDESEESLEEEPRKVLAPEPEEIWV 172
Query: 307 SQPEVGAAIKIIRQLM--------EKFNLDLST-VTQAFLKNSGELEATSAFL-----AS 352
++ G +K+ R+ + E FN L V + FL +L + +L A
Sbjct: 173 AEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAY 232
Query: 353 GQRADGYPIWSRQD---------DIDLQKDDEDTREALVKKFGAQNVARRIEFRKK 399
RA G+P W Q D+++DDED+++ + +N +R RK+
Sbjct: 233 FSRA-GFPSWQYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYRKNRSRIPLLRKR 287
>gi|239743297 PREDICTED: speedy homolog E6 [Homo sapiens]
Length = 402
Score = 41.2 bits (95), Expect = 0.002
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 47/236 (19%)
Query: 203 SPSSQKL--KRKAEEDPEAADSGEPQNKRTPDLPEEEYVKE-----EIQENEEAVKKMLV 255
SP + L KRK E E+ + EP+ + P+ PEE +V E +++ ++ V +L
Sbjct: 60 SPPCRSLGWKRKREWSDESEE--EPEKELAPE-PEETWVVEMLCGLKMKLKQQRVSSILP 116
Query: 256 EATREFEEVV---VDESPPDFEIHITMCDDDPPTPEEDSETQPDEEE------EEEEEKV 306
E ++F + VD SPP H + C ++SE +EE E EE V
Sbjct: 117 EHHKDFNSQLAPGVDPSPP----HRSFCWKRKMEWWDESEESLEEEPRKVLAPEPEEIWV 172
Query: 307 SQPEVGAAIKIIRQLM--------EKFNLDLST-VTQAFLKNSGELEATSAFL-----AS 352
++ G +K+ R+ + E FN L V + FL +L + +L A
Sbjct: 173 AEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAY 232
Query: 353 GQRADGYPIWSRQD---------DIDLQKDDEDTREALVKKFGAQNVARRIEFRKK 399
RA G+P W Q D+++DDED+++ + +N +R RK+
Sbjct: 233 FSRA-GFPSWQYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYRKNRSRIPLLRKR 287
>gi|239508980 PREDICTED: speedy homolog E6 (Xenopus laevis) [Homo
sapiens]
Length = 402
Score = 41.2 bits (95), Expect = 0.002
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 47/236 (19%)
Query: 203 SPSSQKL--KRKAEEDPEAADSGEPQNKRTPDLPEEEYVKE-----EIQENEEAVKKMLV 255
SP + L KRK E E+ + EP+ + P+ PEE +V E +++ ++ V +L
Sbjct: 60 SPPCRSLGWKRKREWSDESEE--EPEKELAPE-PEETWVVEMLCGLKMKLKQQRVSSILP 116
Query: 256 EATREFEEVV---VDESPPDFEIHITMCDDDPPTPEEDSETQPDEEE------EEEEEKV 306
E ++F + VD SPP H + C ++SE +EE E EE V
Sbjct: 117 EHHKDFNSQLAPGVDPSPP----HRSFCWKRKMEWWDESEESLEEEPRKVLAPEPEEIWV 172
Query: 307 SQPEVGAAIKIIRQLM--------EKFNLDLST-VTQAFLKNSGELEATSAFL-----AS 352
++ G +K+ R+ + E FN L V + FL +L + +L A
Sbjct: 173 AEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAY 232
Query: 353 GQRADGYPIWSRQD---------DIDLQKDDEDTREALVKKFGAQNVARRIEFRKK 399
RA G+P W Q D+++DDED+++ + +N +R RK+
Sbjct: 233 FSRA-GFPSWQYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYRKNRSRIPLLRKR 287
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 41.2 bits (95), Expect = 0.002
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 215 EDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFE 274
ED EA DS + + +EE EE +++E+ ++ E E E+V DE
Sbjct: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDE------ 204
Query: 275 IHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQ 320
DD EE+ E DEE+E+E+E + E G K R+
Sbjct: 205 -------DDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRE 243
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 40.8 bits (94), Expect = 0.002
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 202 VSPSSQKLKRKA----EEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEA 257
+ P++ K A +ED E + E + D EEE ++ + ++A K + V+A
Sbjct: 170 IEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKA 229
Query: 258 TREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAA 314
E+ +E D + DDD +ED E DE++EEEEE+ + V A
Sbjct: 230 KNVAEDEDEEEDDEDED------DDD----DEDDEDDDDEDDEEEEEEEEEEPVKEA 276
Score = 28.9 bits (63), Expect = 8.6
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 281 DDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQLMEKFNLDLSTVTQAFLKNS 340
DDD EED E DE+E+E+E + + + AA ++ + D ++
Sbjct: 150 DDDS---EEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDED-DEDDDDDEEDD 205
Query: 341 GELEATSAFLASGQR-ADGYPIWSRQ--DDIDLQKDDED 376
E EA A G++ A P+ ++ +D D ++DDED
Sbjct: 206 SEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDED 244
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 40.8 bits (94), Expect = 0.002
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 227 NKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPT 286
N + D EEE +EE +E EE ++ E E EE +E + E +++
Sbjct: 882 NINSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGE 941
Query: 287 PEEDSETQPDEEEEEEEEKVSQPEVGAA 314
EE+ E + +EEEEE EE V E G A
Sbjct: 942 LEEEEEEEDEEEEEELEE-VEDLEFGTA 968
Score = 33.5 bits (75), Expect = 0.35
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 270 PPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEK 305
PP E +T+ + + EE+ E + +EEEEEEEE+
Sbjct: 871 PPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEE 906
Score = 32.7 bits (73), Expect = 0.59
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Query: 210 KRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDES 269
+ + EED E + E + + EEE+ +EE +E E +++ E E EE + +
Sbjct: 903 EEEEEEDFEEEEEDEEEYFEEEEEEEEEF-EEEFEEEEGELEEEEEEEDEEEEEELEEVE 961
Query: 270 PPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQ-LMEKFNLD 328
+F ++ P P P E + + +PE G +++ E+ D
Sbjct: 962 DLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGAD 1021
Query: 329 LS-TVTQAFLKNSGELEATSAFLASG 353
+ T+ L + GE+E A+G
Sbjct: 1022 TAPTLAPEALPSQGEVEREGESPAAG 1047
Score = 32.0 bits (71), Expect = 1.0
Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 19/134 (14%)
Query: 199 DAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEAT 258
D ++ + + EE+ E D E + EEE +EE +E E + L E
Sbjct: 887 DEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEE 946
Query: 259 REFEEVVVDESPPDFEIHITMCDDD-------PPT-------PEEDSETQPDEEEE---- 300
E +E +E ++ + PPT PE + QP+ E E
Sbjct: 947 EEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLL 1006
Query: 301 -EEEEKVSQPEVGA 313
E EE ++ E GA
Sbjct: 1007 LEVEEPGTEEERGA 1020
Score = 30.8 bits (68), Expect = 2.3
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 217 PEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIH 276
P+ G P P L EE+ I ++E ++ E E EE +E DFE
Sbjct: 858 PQLVPEGTPGGGGPPAL-EEDLTVININSSDEEEEE---EEEEEEEEEEEEEEEEDFE-- 911
Query: 277 ITMCDDDPPTPEEDSET--QPDEEEEEEEEKVSQPEVG 312
EED E + +EEEEEE E+ + E G
Sbjct: 912 ---------EEEEDEEEYFEEEEEEEEEFEEEFEEEEG 940
>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
sapiens]
Length = 1710
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 56/261 (21%)
Query: 102 GPASAADTGSEAKPGALAEGAAEPEPQRHAGRIAFTDADDVAILTYVKENA--RSPSSVT 159
G S + +GS + + G+++ + +G + +++D +EN P V
Sbjct: 29 GSGSGSSSGSSSDGSSSQSGSSDSDSGSESGSQSESESDTS------RENKVQAKPPKVD 82
Query: 160 GNALWK------AMEKSSLT---QHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLK 210
G WK A+++S++ Q Q + + + +E D+ S S K K
Sbjct: 83 GAEFWKSSPSILAVQRSAILKKQQQQQQQQQHQASSNSGSEEDSSSSEDSDDSSSEVKRK 142
Query: 211 RKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAV-------------------- 250
+ +ED + + SG P + EEE K E E
Sbjct: 143 KHKDEDWQMSGSGSPSQSGSDSESEEEREKSSCDETESDYEPKNKVKSRKPQNRSKSKNG 202
Query: 251 KKMLVEATREFEEVVVDESPPDFE-----------IHITMCDDDPPTPEED--------S 291
KK+L + R+ + D+ D++ ++++ +D+ + D
Sbjct: 203 KKILGQKKRQIDSSEEDDDEEDYDNDKRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGED 262
Query: 292 ETQPDEEEEEEEEKVSQPEVG 312
QP+EEE E E+ +G
Sbjct: 263 VPQPEEEEFETIERFMDCRIG 283
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 40.4 bits (93), Expect = 0.003
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 163 LWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADS 222
+W+ EK + + ++++ K R QE K D + +++ R+ E+ E +
Sbjct: 348 MWRQEEK---IREQEEKIREQEEKMWR-QEEKIREQDEKIQEQEEEMWRQEEKIREQEEK 403
Query: 223 GEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDD 282
+ + R E+ E+I+E EE + + E RE EE++ D+ E+ M ++
Sbjct: 404 RQEKMWRQEKKMREQ--DEKIREQEEEMWRQ-EEKIRELEEMMQDQEEKLREVEEKMQEE 460
Query: 283 DPPTPEEDSETQPDEEE-EEEEEKVSQPE 310
+ E++ + Q EE+ +E+EEK + E
Sbjct: 461 EEKMQEQEEKIQRQEEKIQEQEEKTWRQE 489
Score = 39.7 bits (91), Expect = 0.005
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 163 LWKAMEKSSLTQHSWQSLKDRYLKH---LRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEA 219
+W+ EK + + +D+ + +R QE K + + +K++ E+D +
Sbjct: 327 MWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEKIR---EQDEKI 383
Query: 220 ADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITM 279
+ E ++ + E+E ++E +E + E RE EE + + E+ M
Sbjct: 384 QEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEKIRELEEMM 443
Query: 280 CDDDPPTPEEDSETQPDEEE-EEEEEKVSQPE 310
D + E + + Q +EE+ +E+EEK+ + E
Sbjct: 444 QDQEEKLREVEEKMQEEEEKMQEQEEKIQRQE 475
Score = 34.7 bits (78), Expect = 0.16
Identities = 29/149 (19%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 163 LWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADS 222
+W+ EK + Q R K +R Q+ K + +++ R+ E+ E +
Sbjct: 390 MWRQEEKIREQEEKRQEKMWRQEKKMREQDEK-------IREQEEEMWRQEEKIRELEEM 442
Query: 223 GEPQNKRTPDLPEEEYVKEE-IQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCD 281
+ Q ++ ++ E+ +EE +QE EE +++ EE + ++ + +
Sbjct: 443 MQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQ--------EEKIQEQEEKTWRQEKLLKQ 494
Query: 282 DDPPTPEEDSETQPDEEEEEEEEKVSQPE 310
++ +E+ + +E+ E+EEK+ + E
Sbjct: 495 EEKIWEQEEKMWRQEEKMWEQEEKMQEQE 523
Score = 31.6 bits (70), Expect = 1.3
Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Query: 191 QEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAV 250
QE K + + +K+ E++ + + E ++ + E+E E+I+E E+ +
Sbjct: 295 QEEKMWRQEEKIQEQEEKM---CEQELKIREQEEKMWRQEEKMHEQE---EKIREQEDKM 348
Query: 251 KKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPE 310
+ E RE EE + ++ + + + D E++ E EE+ E+E+ Q +
Sbjct: 349 WRQ-EEKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEK 407
Query: 311 VGAAIKIIRQLMEK 324
+ K +R+ EK
Sbjct: 408 MWRQEKKMREQDEK 421
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 40.4 bits (93), Expect = 0.003
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 163 LWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADS 222
+W+ EK + + ++++ K R QE K D + +++ R+ E+ E +
Sbjct: 348 MWRQEEK---IREQEEKIREQEEKMWR-QEEKIREQDEKIQEQEEEMWRQEEKIREQEEK 403
Query: 223 GEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDD 282
+ + R E+ E+I+E EE + + E RE EE++ D+ E+ M ++
Sbjct: 404 RQEKMWRQEKKMREQ--DEKIREQEEEMWRQ-EEKIRELEEMMQDQEEKLREVEEKMQEE 460
Query: 283 DPPTPEEDSETQPDEEE-EEEEEKVSQPE 310
+ E++ + Q EE+ +E+EEK + E
Sbjct: 461 EEKMQEQEEKIQRQEEKIQEQEEKTWRQE 489
Score = 39.7 bits (91), Expect = 0.005
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 163 LWKAMEKSSLTQHSWQSLKDRYLKH---LRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEA 219
+W+ EK + + +D+ + +R QE K + + +K++ E+D +
Sbjct: 327 MWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEKIR---EQDEKI 383
Query: 220 ADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITM 279
+ E ++ + E+E ++E +E + E RE EE + + E+ M
Sbjct: 384 QEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEKIRELEEMM 443
Query: 280 CDDDPPTPEEDSETQPDEEE-EEEEEKVSQPE 310
D + E + + Q +EE+ +E+EEK+ + E
Sbjct: 444 QDQEEKLREVEEKMQEEEEKMQEQEEKIQRQE 475
Score = 34.7 bits (78), Expect = 0.16
Identities = 29/149 (19%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 163 LWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADS 222
+W+ EK + Q R K +R Q+ K + +++ R+ E+ E +
Sbjct: 390 MWRQEEKIREQEEKRQEKMWRQEKKMREQDEK-------IREQEEEMWRQEEKIRELEEM 442
Query: 223 GEPQNKRTPDLPEEEYVKEE-IQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCD 281
+ Q ++ ++ E+ +EE +QE EE +++ EE + ++ + +
Sbjct: 443 MQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQ--------EEKIQEQEEKTWRQEKLLKQ 494
Query: 282 DDPPTPEEDSETQPDEEEEEEEEKVSQPE 310
++ +E+ + +E+ E+EEK+ + E
Sbjct: 495 EEKIWEQEEKMWRQEEKMWEQEEKMQEQE 523
Score = 31.6 bits (70), Expect = 1.3
Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Query: 191 QEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAV 250
QE K + + +K+ E++ + + E ++ + E+E E+I+E E+ +
Sbjct: 295 QEEKMWRQEEKIQEQEEKM---CEQELKIREQEEKMWRQEEKMHEQE---EKIREQEDKM 348
Query: 251 KKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPE 310
+ E RE EE + ++ + + + D E++ E EE+ E+E+ Q +
Sbjct: 349 WRQ-EEKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEK 407
Query: 311 VGAAIKIIRQLMEK 324
+ K +R+ EK
Sbjct: 408 MWRQEKKMREQDEK 421
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 40.4 bits (93), Expect = 0.003
Identities = 54/261 (20%), Positives = 102/261 (39%), Gaps = 23/261 (8%)
Query: 89 ERNERLELEAYRLGPASAADTGSEAKPGALAEGAAEPEPQRHAGRIAFTDADDVAILTYV 148
+++ E A G S +D+ S + + + E G D +D A L +
Sbjct: 140 DKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQM 199
Query: 149 KENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQK 208
E R L+ +EK + + ++ K LK + +E K +K
Sbjct: 200 TEKEREQE------LFNRIEKREVLKRRFEIKKK--LKTAKKKEKKEKKKKQEEEQEKKK 251
Query: 209 LKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDE 268
L + +E + + E ++KR L ++ EE++ E K E + + + E
Sbjct: 252 LTQ-IQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSE 310
Query: 269 SPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEK--------VSQPEVGAAIKIIRQ 320
D E +DD + + D ++ +EEEE++ VS PE +++ R
Sbjct: 311 VYSDDEEEE---EDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRH 367
Query: 321 LMEKF---NLDLSTVTQAFLK 338
+E++ TVT F++
Sbjct: 368 KLERWCHMPFFAKTVTGCFVR 388
Score = 29.3 bits (64), Expect = 6.6
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 20/217 (9%)
Query: 168 EKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQN 227
++++ T S S KD + +E + D+ S SS +E++ GE
Sbjct: 128 KQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGE--- 184
Query: 228 KRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMCDDDPPTP 287
DL +E + +++ E ++ + E EV+ FEI +
Sbjct: 185 ----DLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRR----FEIKKKL---KTAKK 233
Query: 288 EEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQLMEKFNLDLSTVTQAFLKNSGELE--- 344
+E E + +EEE+E++K++Q + ++ K + L +QA + E E
Sbjct: 234 KEKKEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRK 293
Query: 345 -ATSAFLASGQRADGYPIWSRQDDIDLQKDDEDTREA 380
T+ LA Q ++S DD + ++DD+ + ++
Sbjct: 294 NRTAELLAKKQPLKTSEVYS--DDEEEEEDDKSSEKS 328
>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
Length = 224
Score = 40.4 bits (93), Expect = 0.003
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 260 EFEEVVVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQP 309
E EE S P ++ DDD EE+ E + +EEEEEEEE+ P
Sbjct: 21 EEEEAATSSSSPSSSSSVSGPDDDEEDEEEEEEEEEEEEEEEEEEEEEAP 70
Score = 29.6 bits (65), Expect = 5.0
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 214 EEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPP 271
EE+ A S P + + P+++ EE +E EE E E EE +E+PP
Sbjct: 21 EEEEAATSSSSPSSSSSVSGPDDDEEDEEEEEEEE-------EEEEEEEEEEEEEAPP 71
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 40.0 bits (92), Expect = 0.004
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 212 KAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPP 271
K E+ P D EP + +P+E +E + EE + E + ++V V+E
Sbjct: 207 KEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQE----EGEEDEDDVDVEEEED 262
Query: 272 DFEIHITMCDDDPPTPEEDSETQPDEEEEEE----EEKVSQPEVGAA 314
+ E D P EED E + +E+EE E E++S E G A
Sbjct: 263 EDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIA 309
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 40.0 bits (92), Expect = 0.004
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 212 KAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPP 271
K E+ P D EP + +P+E +E + EE + E + ++V V+E
Sbjct: 207 KEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQE----EGEEDEDDVDVEEEED 262
Query: 272 DFEIHITMCDDDPPTPEEDSETQPDEEEEEE----EEKVSQPEVGAA 314
+ E D P EED E + +E+EE E E++S E G A
Sbjct: 263 EDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIA 309
>gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo
sapiens]
Length = 482
Score = 39.7 bits (91), Expect = 0.005
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 167 MEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPEAADSGEPQ 226
+E+ L + Q L + +L + + ++ + ++ +K +E+ E + +
Sbjct: 58 LEEEKLLERERQRLHEEWLLREQKAQEEFR-----IKKEKEEAAKKRQEEQERKLKEQWE 112
Query: 227 NKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVV---DESPPDFEI 275
++ + EEE ++E +E EEA++KML +A E E E P DF +
Sbjct: 113 EQQRKEREEEEQKRQEKKEKEEALQKMLDQAENELENGTTWQNPEPPVDFRV 164
Score = 28.9 bits (63), Expect = 8.6
Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 20/117 (17%)
Query: 207 QKLKRKAEEDPEAADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVV 266
+K K++ +E DSG Q + E+ +++E+ E E+ +++ E R EE ++
Sbjct: 25 EKRKKRRQELARLRDSGLSQKEEE----EDTFIEEQQLEEEKLLER---ERQRLHEEWLL 77
Query: 267 DESPPDFEIHITMCDDDPPTP-------------EEDSETQPDEEEEEEEEKVSQPE 310
E E I ++ EE + +EEE++ +EK + E
Sbjct: 78 REQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQRKEREEEEQKRQEKKEKEE 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.128 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,562,195
Number of Sequences: 37866
Number of extensions: 919147
Number of successful extensions: 13100
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 451
Number of HSP's that attempted gapping in prelim test: 7933
Number of HSP's gapped (non-prelim): 2913
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.