Guide to the Human Genome
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Name: PLA2G6 Sequence: fasta or formatted (806aa) NCBI GI: 52486194
Description:

phospholipase A2, group VI isoform a

Referenced in:

Ankyrin Family
Lipid Metabolism

Other entries for this name:
alt prot [752aa] phospholipase A2, group VI isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         62           2
 C cysteine            2.4         19           2
 D aspartate           4.7         38           1
 E glutamate           6.0         48           2
 F phenylalanine       4.1         33           2
 G glycine             6.8         55           3
 H histidine           3.6         29           2
 I isoleucine          4.2         34           3
 K lysine              4.0         32           2
 L leucine            10.9         88           3
 M methionine          3.0         24           1
 N asparagine          5.2         42           2
 P proline             5.3         43           3
 Q glutamine           4.3         35           1
 R arginine            6.3         51           1
 S serine              6.0         48           2
 T threonine           5.1         41           1
 V valine              7.2         58           2
 W tryptophan          1.0          8           1
 Y tyrosine            2.2         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group VI isoform a 
PLA2G6                0.900   phospholipase A2, group VI isoform b 
ANK3                  0.056   ankyrin 3 isoform 1 
ANK2                  0.055   ankyrin 2 isoform 3 
ANK2                  0.055   ankyrin 2 isoform 2 
ANK2                  0.055   ankyrin 2 isoform 1 
ANK1                  0.054   ankyrin 1 isoform 9 
ANK1                  0.054   ankyrin 1 isoform 1 
ANK1                  0.054   ankyrin 1 isoform 3 
ANK1                  0.054   ankyrin 1 isoform 2 
ANK1                  0.054   ankyrin 1 isoform 4 
RIPK4                 0.053   ankyrin repeat domain 3 
ANKRD44               0.050   ankyrin repeat domain 44 
ANKRD28               0.046   ankyrin repeat domain 28 
ANKK1                 0.046   ankyrin repeat and kinase domain containing 1 
ANKRD52               0.043   ankyrin repeat domain 52 
ASB13                 0.043   ankyrin repeat and SOCS box-containing protein 13 [H...
DAPK1                 0.041   death-associated protein kinase 1 
MIB1                  0.040   mindbomb homolog 1 
MIB2                  0.038   mindbomb homolog 2 
ANKRD6                0.038   ankyrin repeat domain 6 
ASB3                  0.038   ankyrin repeat and SOCS box-containing protein 3 isof...
PNPLA8                0.037   patatin-like phospholipase domain containing 8 [Homo...
PSMD10                0.037   proteasome 26S non-ATPase subunit 10 isoform 1 
POTEE                 0.035   protein expressed in prostate, ovary, testis, and p...
ANKFY1                0.035   ankyrin repeat and FYVE domain containing 1 isoform...
POTEG                 0.035   POTE ankyrin domain family, member G 
P704P                 0.035   prostate-specific P704P 
POTEH                 0.035   ANKRD26-like family C, member 3 
POTEF                 0.035   prostate, ovary, testis expressed protein on chromo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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