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Search of human proteins with 52353302
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|52353302 transmembrane protein 198 [Homo sapiens]
(360 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|52353302 transmembrane protein 198 [Homo sapiens] 730 0.0
gi|239755836 PREDICTED: hypothetical protein LOC440104 isoform 1... 110 1e-24
gi|239750337 PREDICTED: similar to RIKEN cDNA 1110012D08 [Homo s... 110 1e-24
gi|239744643 PREDICTED: hypothetical protein LOC440104 [Homo sap... 110 1e-24
gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens] 50 2e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 39 0.006
gi|19923957 major facilitator superfamily domain containing 3 [H... 37 0.021
gi|45580709 unc-93 homolog B1 [Homo sapiens] 37 0.027
gi|62988336 hypothetical protein LOC441168 [Homo sapiens] 36 0.047
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 36 0.061
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 36 0.061
gi|206597541 solute carrier family 39 (metal ion transporter), m... 35 0.10
gi|206597539 solute carrier family 39 (metal ion transporter), m... 35 0.10
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 35 0.14
gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo s... 34 0.18
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 34 0.18
gi|206597556 kelch domain containing 7B [Homo sapiens] 34 0.18
gi|148612835 zinc finger protein 207 isoform c [Homo sapiens] 34 0.18
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 34 0.18
gi|46409316 zinc finger, DHHC-type containing 24 [Homo sapiens] 34 0.18
gi|73808090 zinc finger protein 207 isoform b [Homo sapiens] 34 0.18
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 34 0.23
gi|239757315 PREDICTED: hypothetical protein [Homo sapiens] 34 0.23
gi|239752742 PREDICTED: hypothetical protein [Homo sapiens] 34 0.23
gi|239751820 PREDICTED: hypothetical protein [Homo sapiens] 34 0.23
gi|239747280 PREDICTED: hypothetical protein XP_002346418 [Homo ... 34 0.23
gi|239746311 PREDICTED: hypothetical protein XP_002343692 [Homo ... 34 0.23
gi|239741104 PREDICTED: hypothetical protein XP_002342091 [Homo ... 34 0.23
gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo s... 34 0.23
gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo s... 34 0.23
>gi|52353302 transmembrane protein 198 [Homo sapiens]
Length = 360
Score = 730 bits (1884), Expect = 0.0
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MPGTVATLRFQLLPPEPDDAFWGAPCEQPLERRYQALPALVCIMCCLFGVVYCFFGYRCF 60
MPGTVATLRFQLLPPEPDDAFWGAPCEQPLERRYQALPALVCIMCCLFGVVYCFFGYRCF
Sbjct: 1 MPGTVATLRFQLLPPEPDDAFWGAPCEQPLERRYQALPALVCIMCCLFGVVYCFFGYRCF 60
Query: 61 KAVLFLTGLLFGSVVIFLLCYRERVLETQLSAGASAGIALGIGLLCGLVAMLVRSVGLFL 120
KAVLFLTGLLFGSVVIFLLCYRERVLETQLSAGASAGIALGIGLLCGLVAMLVRSVGLFL
Sbjct: 61 KAVLFLTGLLFGSVVIFLLCYRERVLETQLSAGASAGIALGIGLLCGLVAMLVRSVGLFL 120
Query: 121 VGLLLGLLLAAAALLGSAPYYQPGSVWGPLGLLLGGGLLCALLTLRWPRPLTTLATAVTG 180
VGLLLGLLLAAAALLGSAPYYQPGSVWGPLGLLLGGGLLCALLTLRWPRPLTTLATAVTG
Sbjct: 121 VGLLLGLLLAAAALLGSAPYYQPGSVWGPLGLLLGGGLLCALLTLRWPRPLTTLATAVTG 180
Query: 181 AALIATAADYFAELLLLGRYVVERLRAAPVPPLCWRSWALLALWPLLSLMGVLVQWRVTA 240
AALIATAADYFAELLLLGRYVVERLRAAPVPPLCWRSWALLALWPLLSLMGVLVQWRVTA
Sbjct: 181 AALIATAADYFAELLLLGRYVVERLRAAPVPPLCWRSWALLALWPLLSLMGVLVQWRVTA 240
Query: 241 EGDSHTEVVISRQRRRVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRR 300
EGDSHTEVVISRQRRRVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRR
Sbjct: 241 EGDSHTEVVISRQRRRVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRR 300
Query: 301 RPVPIKRFNGDVLSPSYIQSFRDRQTGSSLSSFMASPTDADYEYGSRGPLTACSGPPVRV 360
RPVPIKRFNGDVLSPSYIQSFRDRQTGSSLSSFMASPTDADYEYGSRGPLTACSGPPVRV
Sbjct: 301 RPVPIKRFNGDVLSPSYIQSFRDRQTGSSLSSFMASPTDADYEYGSRGPLTACSGPPVRV 360
>gi|239755836 PREDICTED: hypothetical protein LOC440104 isoform 1
[Homo sapiens]
Length = 105
Score = 110 bits (276), Expect = 1e-24
Identities = 59/105 (56%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 111 MLVRSVGLFLVGLLLGLLLAAAALLGSAPYYQPGSVWGPLGLLLGGGLLCALLTLRWPRP 170
MLV VGL L GLLLGL L A ALL S P YQP S W P G L+G LL ALLTLRWPRP
Sbjct: 1 MLVHCVGLLLTGLLLGLTLGAGALLASEPIYQPPSAWVPAGGLVGLALLGALLTLRWPRP 60
Query: 171 LTTLATAVTGAALIATAADYFAELLLLGRYVVERLRAAP-VPPLC 214
T L T + G+A++ DYF E L LG ++ +RL+ P +P LC
Sbjct: 61 FTVLGTTLLGSAVLVACVDYFLEGLALGSWLGQRLQTLPALPSLC 105
>gi|239750337 PREDICTED: similar to RIKEN cDNA 1110012D08 [Homo
sapiens]
Length = 105
Score = 110 bits (276), Expect = 1e-24
Identities = 59/105 (56%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 111 MLVRSVGLFLVGLLLGLLLAAAALLGSAPYYQPGSVWGPLGLLLGGGLLCALLTLRWPRP 170
MLV VGL L GLLLGL L A ALL S P YQP S W P G L+G LL ALLTLRWPRP
Sbjct: 1 MLVHCVGLLLTGLLLGLTLGAGALLASEPIYQPPSAWVPAGGLVGLALLGALLTLRWPRP 60
Query: 171 LTTLATAVTGAALIATAADYFAELLLLGRYVVERLRAAP-VPPLC 214
T L T + G+A++ DYF E L LG ++ +RL+ P +P LC
Sbjct: 61 FTVLGTTLLGSAVLVACVDYFLEGLALGSWLGQRLQTLPALPSLC 105
>gi|239744643 PREDICTED: hypothetical protein LOC440104 [Homo
sapiens]
Length = 105
Score = 110 bits (276), Expect = 1e-24
Identities = 59/105 (56%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 111 MLVRSVGLFLVGLLLGLLLAAAALLGSAPYYQPGSVWGPLGLLLGGGLLCALLTLRWPRP 170
MLV VGL L GLLLGL L A ALL S P YQP S W P G L+G LL ALLTLRWPRP
Sbjct: 1 MLVHCVGLLLTGLLLGLTLGAGALLASEPIYQPPSAWVPAGGLVGLALLGALLTLRWPRP 60
Query: 171 LTTLATAVTGAALIATAADYFAELLLLGRYVVERLRAAP-VPPLC 214
T L T + G+A++ DYF E L LG ++ +RL+ P +P LC
Sbjct: 61 FTVLGTTLLGSAVLVACVDYFLEGLALGSWLGQRLQTLPALPSLC 105
>gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens]
Length = 570
Score = 50.4 bits (119), Expect = 2e-06
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 47 LFGVVYCFFGYRCFKAVLFLTGLLFGSVVIFLLCYRERVL--ETQLSAGASAGIALGIGL 104
L G CFFG+R +K LF G + ++L R + + L A G G+ L
Sbjct: 303 LLGFFICFFGHRFWKTELFFIGFIIMGFFFYILITRLTPIKYDVNLILTAVTGSVGGMFL 362
Query: 105 LCGLVAMLVRSVGLFLVGLLLGLLLAAAAL---LGSAP-YYQPGSVWGPLGLLLGGGLLC 160
+ + S+ + VGL+LG L+++ LG+ ++ G W + +L
Sbjct: 363 VAVWWRFGILSICMLCVGLVLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCI---AILI 419
Query: 161 ALLTLRWPRPLTTLATAVTGAALIATAADYF--AELLLLGRYVVERL------RAAPVPP 212
++ + R L L V G+ + A D + L + V++R RA P
Sbjct: 420 PVVFMGCLRILNILTCGVIGSYSVVLAIDSYWSTSLSYITLNVLKRALNKDFHRAFTNVP 479
Query: 213 LCWRSWALLALWPLLSLMGVLVQWR 237
+ +LA+W +L++ G+ +Q R
Sbjct: 480 FQTNDFIILAVWGMLAVSGITLQIR 504
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 39.3 bits (90), Expect = 0.006
Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 25/121 (20%)
Query: 237 RVTAEGDSHTEVVISRQRRRVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDP 296
R + SHT R RRR R + RR+ P R P R PPR PP P
Sbjct: 287 RTRSRSPSHT-----RPRRRH-----RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPP 336
Query: 297 AYRRRPVPIKRFNGDVLSPSYIQSFRDRQTGSSLSSFMASPTDADYEYGSRGPLTACSGP 356
+RR P++ R R++ +SLS +S + + + P S P
Sbjct: 337 RHRRSRSPVR---------------RRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP 381
Query: 357 P 357
P
Sbjct: 382 P 382
Score = 36.6 bits (83), Expect = 0.036
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 223 LWPLLSLMGVLVQWRVTAEGDSHTEVVISRQRRRVQLMRIRQQEDRKEKRRK--KRPPRA 280
LWPLL + +A + E + RQ + +L +++Q++ K+KR K K R
Sbjct: 105 LWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSRE 164
Query: 281 PLRGPRAPPRPGPPDPAYRRRPVPIKR 307
R+P R P+ RRR P++R
Sbjct: 165 KRERSRSPRRRKSRSPSPRRRSSPVRR 191
Score = 34.3 bits (77), Expect = 0.18
Identities = 34/99 (34%), Positives = 38/99 (38%), Gaps = 18/99 (18%)
Query: 271 KRRKKRPPRAPLRGPRAPPRPGP-------PDPAYRRRPVPIKRFNGDVLSPSYIQSFRD 323
KRR PP P R RA P P P P P R PV +R SPS R
Sbjct: 611 KRRTASPPPPPKR--RASPSPPPKRRVSHSPPPKQRSSPVTKRR------SPSLSSKHRK 662
Query: 324 RQTGSSLSSFMASPTDADYEYGS---RGPLTACSGPPVR 359
+ S + SP S R P T+ S PPVR
Sbjct: 663 GSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVR 701
Score = 32.7 bits (73), Expect = 0.52
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 261 RIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVPIKR 307
R RQ+E RR++ P P R R+ P P PP P RR P P R
Sbjct: 534 RKRQKETSPRGRRRRSPSPPPTRRRRS-PSPAPP-PRRRRTPTPPPR 578
Score = 30.4 bits (67), Expect = 2.6
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 252 RQRRRVQLMRIRQQEDRKEKRRKKRPPRAP----LRGPRAPPRPGPPDPAYRRRPVPIKR 307
RQ+ R R+ RR++ P AP R P PPR P P RRR +R
Sbjct: 536 RQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRR 595
Query: 308 FN 309
++
Sbjct: 596 YS 597
Score = 28.5 bits (62), Expect = 9.8
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Query: 253 QRRRVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPR------PGPPDPAYRRRPVP 304
+RRR + R + PP+ P + +PPR P P R RP P
Sbjct: 346 RRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSP 403
>gi|19923957 major facilitator superfamily domain containing 3 [Homo
sapiens]
Length = 412
Score = 37.4 bits (85), Expect = 0.021
Identities = 42/109 (38%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 101 GIGLLCGLVAML----VRSVGL--FLVGLLLGLLLAAA----ALLGSAPYYQPGSVWGP- 149
G+GL+CGL+A L GL + GLLL L L AA AL A + GP
Sbjct: 76 GLGLVCGLLAGLPPPGAGQAGLPAAVAGLLLLLNLGAAMQDVALDALAVQLLEPAELGPG 135
Query: 150 ---------LGLLLGGGLLCALL-TLRWPRPLTTLATAVTGAALIATAA 188
LG L GG L ALL T WP+ LA AA +A AA
Sbjct: 136 NTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAALAWAA 184
>gi|45580709 unc-93 homolog B1 [Homo sapiens]
Length = 597
Score = 37.0 bits (84), Expect = 0.027
Identities = 66/247 (26%), Positives = 100/247 (40%), Gaps = 43/247 (17%)
Query: 94 ASAGIALGIGLLCGLVAMLVRSVGLFLVGLLL---GLLLAAAALLGSAPYYQPGSVWGPL 150
A GIALG G V SVGL + LL L +AA+LLG + P P+
Sbjct: 357 ACTGIALGYG---------VCSVGLERLAYLLVAYSLGASAASLLGLLGLWLPR----PV 403
Query: 151 GLLLGGG--LLCALLTLRW---PRPLTTLATAVTGAAL--IATAADYFAELLLLGRYVVE 203
L+ G G LL + W PR L AAL + +A + LLG +
Sbjct: 404 PLVAGAGVHLLLTFILFFWAPVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYED 463
Query: 204 RLRAAPVPPLC--WRSWALLALWPLLSL-----MGVLVQWRVTA------------EGDS 244
+ R + + W++ A+ ++ SL + VL+ V A G +
Sbjct: 464 KERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVA 523
Query: 245 HTEVVISRQRRRVQLMRIRQQEDRKEKRRK-KRPPRAPLRGPRAPPRPGPPDPAYRRRPV 303
+ I R + +V+ R ++++ E + + A P A PRPGP RRP
Sbjct: 524 PRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPC 583
Query: 304 PIKRFNG 310
P ++ G
Sbjct: 584 PYEQAQG 590
>gi|62988336 hypothetical protein LOC441168 [Homo sapiens]
Length = 315
Score = 36.2 bits (82), Expect = 0.047
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 31/118 (26%)
Query: 107 GLVAMLVRSVGLFLVG---------LLLGLLLAAAALLGSAPYYQPGSVWGPLGLLLGGG 157
GLV +LV ++ LFL+G LL G +A A GSA L G
Sbjct: 52 GLVFLLVPALALFLLGYVLSARTWRLLTGCCSSARASCGSA---------------LRGS 96
Query: 158 LLCALLTLRWP-RPLTTLATAVTGAAL---IATAADYFAELLLLGRYVVERLRAAPVP 211
L+C ++ PLT +A A+ G A AT + FA+ L LGR R AA +P
Sbjct: 97 LVCTQISAAAALAPLTWVAVALLGGAFYECAATGSAAFAQRLCLGR---NRSCAAELP 151
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 35.8 bits (81), Expect = 0.061
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 263 RQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVPI 305
+ + KE + PPR RGPR PP P PPD PVP+
Sbjct: 160 KHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDD-EDDPVPL 201
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 35.8 bits (81), Expect = 0.061
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 263 RQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVPI 305
+ + KE + PPR RGPR PP P PPD PVP+
Sbjct: 160 KHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDD-EDDPVPL 201
>gi|206597541 solute carrier family 39 (metal ion transporter),
member 5 [Homo sapiens]
Length = 540
Score = 35.0 bits (79), Expect = 0.10
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 84 RVLETQLSAGASA--GIALGIGLLCGLVAMLVR----SVGLFLVGLLLGLLLAAAALLGS 137
R+L L +GA G LG+GL G V + + G+FL L+ +L A L
Sbjct: 444 RLLLLSLVSGALGLGGAVLGVGLSLGPVPLTPWVFGVTAGVFLYVALVDML--PALLRPP 501
Query: 138 APYYQPGSVWGPLGLLLGGGLLCALLTL 165
P P + LGLLLGGGL+ A+ L
Sbjct: 502 EPLPTPHVLLQGLGLLLGGGLMLAITLL 529
>gi|206597539 solute carrier family 39 (metal ion transporter),
member 5 [Homo sapiens]
Length = 540
Score = 35.0 bits (79), Expect = 0.10
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 84 RVLETQLSAGASA--GIALGIGLLCGLVAMLVR----SVGLFLVGLLLGLLLAAAALLGS 137
R+L L +GA G LG+GL G V + + G+FL L+ +L A L
Sbjct: 444 RLLLLSLVSGALGLGGAVLGVGLSLGPVPLTPWVFGVTAGVFLYVALVDML--PALLRPP 501
Query: 138 APYYQPGSVWGPLGLLLGGGLLCALLTL 165
P P + LGLLLGGGL+ A+ L
Sbjct: 502 EPLPTPHVLLQGLGLLLGGGLMLAITLL 529
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 34.7 bits (78), Expect = 0.14
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 20/87 (22%)
Query: 244 SHTEVVISRQRRRVQLMRIRQQEDRKEKRR----------KKRPPRAPLRGPRAPPR--- 290
S + S+ R++QL R E + + +R ++RPP+AP + P+APP
Sbjct: 968 STASFIFSKGSRKLQLERPVSPETQADLQRNLVAELRSISEQRPPQAPKKSPKAPPPVAR 1027
Query: 291 ------PGPPDPAY-RRRPVPIKRFNG 310
P P P+Y R P+ NG
Sbjct: 1028 KPSVGVPPPASPSYPRAEPLTAPPTNG 1054
>gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo
sapiens]
Length = 1283
Score = 34.3 bits (77), Expect = 0.18
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 27/120 (22%)
Query: 243 DSHTEVVISRQRRRVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAP------PR------ 290
+ T V+SRQ + L Q + + + K PR P+ PRAP PR
Sbjct: 488 EKDTAAVVSRQGSSLNLFEDVQITEPEAEPESKSEPRPPISSPRAPQTRAVKPRLEVSPE 547
Query: 291 -------PGPPDPAYRRRPVPIKRFNGDVLSPSYIQSFRDRQTG------SSLSSFMASP 337
P P D P+P +G PS + D Q+ SSLSS +A+P
Sbjct: 548 AQPTARLPSPTDSPSSLPPLPSS--SGQASVPSELGHGADTQSSESPSVFSSLSSPIAAP 605
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 34.3 bits (77), Expect = 0.18
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 273 RKKRPPRAPLRG-PRAPPRPGP-PDPAYRRRPVPIKRFNGDVLSPSYIQSFRDRQTGSSL 330
R + PP P G PR PP PGP P P R +P F V + + S R+ T + L
Sbjct: 849 RPRAPPEPPDPGAPRPPPDPGPLPLPGPREKPT----FVVQVSTEQLLMSLREDVTRNLL 904
Query: 331 SSFMASPTDADYEYGSRGP 349
A+ + RGP
Sbjct: 905 GEKGATARETGPRKAGRGP 923
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 11/66 (16%)
Query: 278 PRAPLRGPRAPPRPGPPDPAYRRRPVPIKRFNGDVLSPSYIQSFRDRQTGSSLSSFMASP 337
P+ P RGP P P PP P P V SP GS LSS P
Sbjct: 771 PQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASP-----------GSGLSSPGPKP 819
Query: 338 TDADYE 343
D+ YE
Sbjct: 820 GDSGYE 825
>gi|206597556 kelch domain containing 7B [Homo sapiens]
Length = 594
Score = 34.3 bits (77), Expect = 0.18
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 266 EDRKEKRRKKRPPRAPLRGPRAPPRPGPPDP-----AYRRRPVP-IKRFNGDVLSPSYIQ 319
E +EK P A RGP PP PP P A R +PVP +++ + ++PS Q
Sbjct: 85 EGTREKSLDPLPQAAMPRGPAQPPAQRPPGPAASSSARRSQPVPQLRKRSRCEIAPSSEQ 144
Query: 320 SFRDRQTGSSLSSFMASPTDADYEYGSRGPLT 351
R +G +P + G G LT
Sbjct: 145 EVRPAASGDPQGE---APGEGGSPAGRSGALT 173
>gi|148612835 zinc finger protein 207 isoform c [Homo sapiens]
Length = 494
Score = 34.3 bits (77), Expect = 0.18
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 245 HTEVVISRQRRRVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVP 304
H + IS + RR QL + ++ R + PP P+ G PP+PG P R P+P
Sbjct: 381 HPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG-MMPPQPGIPQQQGMRPPMP 439
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 34.3 bits (77), Expect = 0.18
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 245 HTEVVISRQRRRVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVP 304
H + IS + RR QL + ++ R + PP P+ G PP+PG P R P+P
Sbjct: 365 HPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG-MMPPQPGIPQQQGMRPPMP 423
>gi|46409316 zinc finger, DHHC-type containing 24 [Homo sapiens]
Length = 284
Score = 34.3 bits (77), Expect = 0.18
Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 97 GIALGIGLLCGLVAMLVRSVGLFL-VGLLLGLLLAAAALLGSAPYYQPGSVWGPLGLLLG 155
G +G G + +L+ + G+ L V +LLG L+A L P + + P +LL
Sbjct: 128 GRCVGFGNYRPFLCLLLHAAGVLLHVSVLLGPALSAL-LRAHTPLHMAALLLLPWLMLLT 186
Query: 156 GGLLCALLTLRWPRPLTTLATAVTGAALIATAADYFAELLLLGRYVVE------------ 203
G + A L + T V GA L + LLL G+ E
Sbjct: 187 GRVSLAQFALAF-----VTDTCVAGALLCGAGLLFHGMLLLRGQTTWEWARGQHSYDLGP 241
Query: 204 --RLRAAPVPPLCWRSWALLALWPLLS--LMGVLVQWRVTAE 241
L+AA P WAL+ LWP L+ L G + ++ TA+
Sbjct: 242 CHNLQAALGP-----RWALVWLWPFLASPLPGDGITFQTTAD 278
>gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]
Length = 463
Score = 34.3 bits (77), Expect = 0.18
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 245 HTEVVISRQRRRVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVP 304
H + IS + RR QL + ++ R + PP P+ G PP+PG P R P+P
Sbjct: 350 HPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG-MMPPQPGIPQQQGMRPPMP 408
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 33.9 bits (76), Expect = 0.23
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 265 QEDRKEKRRKKRPPRAPLRGPRAPPRPGPPD----PAYRRRPVPIKRFNGDVLSPSYIQS 320
Q+D + KRPP P R P RP PP P+ R P P ++ G SP +
Sbjct: 1096 QKDPAQPLEPKRPP--PPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGAPKSPGTTRK 1153
Query: 321 FRDRQTGSSLSSFMASPTDADY 342
++ S + +A P A Y
Sbjct: 1154 DNIGRSQPSPQAGLAGPGPAGY 1175
>gi|239757315 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 33.9 bits (76), Expect = 0.23
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 257 VQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVPIKRFNGDVLSPS 316
V ++ R ED R +K PR+ + P+ PP P P A +P P R + + L S
Sbjct: 46 VSPLQYRSSED-VSYRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSS 104
Query: 317 YIQSFRDRQTGSSLSSFMASPTDA 340
S R G + P DA
Sbjct: 105 IPSSARLASGGRRRARRWGHPQDA 128
>gi|239752742 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 33.9 bits (76), Expect = 0.23
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 251 SRQRRRVQLMRIRQ-QEDRKEK--RRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVP 304
+R RRR + +R+ +E RKE RR+K R P RG R P R G RRR P
Sbjct: 52 TRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARP 108
>gi|239751820 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 33.9 bits (76), Expect = 0.23
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 257 VQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVPIKRFNGDVLSPS 316
V ++ R ED R +K PR+ + P+ PP P P A +P P R + + L S
Sbjct: 46 VSPLQYRSSED-VSYRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSS 104
Query: 317 YIQSFRDRQTGSSLSSFMASPTDA 340
S R G + P DA
Sbjct: 105 IPSSARLASGGRRRARRWGHPQDA 128
>gi|239747280 PREDICTED: hypothetical protein XP_002346418 [Homo
sapiens]
Length = 109
Score = 33.9 bits (76), Expect = 0.23
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 251 SRQRRRVQLMRIRQ-QEDRKEK--RRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVP 304
+R RRR + +R+ +E RKE RR+K R P RG R P R G RRR P
Sbjct: 52 TRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARP 108
>gi|239746311 PREDICTED: hypothetical protein XP_002343692 [Homo
sapiens]
Length = 144
Score = 33.9 bits (76), Expect = 0.23
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 257 VQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVPIKRFNGDVLSPS 316
V ++ R ED R +K PR+ + P+ PP P P A +P P R + + L S
Sbjct: 46 VSPLQYRSSED-VSYRPQKAGPRSAIAPPQPPPAPPVPARARSPQPGPASRCHSNALRSS 104
Query: 317 YIQSFRDRQTGSSLSSFMASPTDA 340
S R G + P DA
Sbjct: 105 IPSSARLASGGRRRARRWGHPQDA 128
>gi|239741104 PREDICTED: hypothetical protein XP_002342091 [Homo
sapiens]
Length = 109
Score = 33.9 bits (76), Expect = 0.23
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 251 SRQRRRVQLMRIRQ-QEDRKEK--RRKKRPPRAPLRGPRAPPRPGPPDPAYRRRPVP 304
+R RRR + +R+ +E RKE RR+K R P RG R P R G RRR P
Sbjct: 52 TRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARP 108
>gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo
sapiens]
Length = 634
Score = 33.9 bits (76), Expect = 0.23
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 264 QQEDRKEKRRK-KRPPRAPLRGPRAPPRPGPPDPAYRRRPVPIK 306
Q ED+KE P AP P APP+P P P ++ PVP K
Sbjct: 135 QAEDKKENTENHSETPAAPALPPSAPPKP-RPKPKPKKSPVPPK 177
>gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo
sapiens]
Length = 645
Score = 33.9 bits (76), Expect = 0.23
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 264 QQEDRKEKRRK-KRPPRAPLRGPRAPPRPGPPDPAYRRRPVPIK 306
Q ED+KE P AP P APP+P P P ++ PVP K
Sbjct: 146 QAEDKKENTENHSETPAAPALPPSAPPKP-RPKPKPKKSPVPPK 188
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.143 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,257,281
Number of Sequences: 37866
Number of extensions: 849729
Number of successful extensions: 10559
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 9537
Number of HSP's gapped (non-prelim): 1026
length of query: 360
length of database: 18,247,518
effective HSP length: 103
effective length of query: 257
effective length of database: 14,347,320
effective search space: 3687261240
effective search space used: 3687261240
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.