Guide to the Human Genome
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Name: TM7SF3 Sequence: fasta or formatted (570aa) NCBI GI: 7706575
Description:

transmembrane 7 superfamily member 3

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         31           2
 C cysteine            1.9         11           1
 D aspartate           3.5         20           2
 E glutamate           4.4         25           2
 F phenylalanine       8.4         48           3
 G glycine             7.0         40           2
 H histidine           1.8         10           1
 I isoleucine          7.2         41           2
 K lysine              2.8         16           1
 L leucine            11.8         67           3
 M methionine          1.6          9           1
 N asparagine          3.9         22           1
 P proline             5.3         30           3
 Q glutamine           3.3         19           1
 R arginine            4.7         27           2
 S serine              7.5         43           2
 T threonine           6.3         36           2
 V valine              7.7         44           2
 W tryptophan          1.8         10           2
 Y tyrosine            3.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane 7 superfamily member 3 
TMEM198               0.022   transmembrane protein 198 
FAM186A               0.009   family with sequence similarity 186, member A [Homo...
TMEM117               0.007   transmembrane protein 117 
SLC26A4               0.006   pendrin 
SLC9A10               0.006   sperm-specific sodium proton exchanger 
FPGT                  0.006   fucose-1-phosphate guanyltransferase 
CLIC5                 0.006   chloride intracellular channel 5 isoform a 
OR10H4                0.005   olfactory receptor, family 10, subfamily H, member 4...
OR5P3                 0.005   olfactory receptor, family 5, subfamily P, member 3 ...
SLC9A3                0.005   solute carrier family 9 (sodium/hydrogen exchanger)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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