Guide to the Human Genome
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Name: WWTR1 Sequence: fasta or formatted (400aa) NCBI GI: 13346498
Description:

WW domain containing transcription regulator 1

Referenced in:

Non-Receptor Tyrosine Kinase Pathways
WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         26           2
 C cysteine            0.8          3           1
 D aspartate           4.8         19           1
 E glutamate           5.2         21           2
 F phenylalanine       2.8         11           2
 G glycine             5.8         23           2
 H histidine           3.5         14           1
 I isoleucine          2.2          9           1
 K lysine              2.0          8           2
 L leucine             9.2         37           1
 M methionine          4.5         18           1
 N asparagine          5.8         23           2
 P proline            11.0         44           3
 Q glutamine           9.5         38           6
 R arginine            4.8         19           1
 S serine              9.0         36           2
 T threonine           7.0         28           2
 V valine              3.8         15           1
 W tryptophan          1.0          4           1
 Y tyrosine            1.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WW domain containing transcription regulator 1 [Homo... 
YAP1                  0.398   Yes-associated protein 1, 65kDa isoform 2 
YAP1                  0.386   Yes-associated protein 1, 65kDa isoform 1 
MAGI3                 0.036   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.036   membrane-associated guanylate kinase-related  3 iso...
NEDD4L                0.034   neural precursor cell expressed, developmentally dow...
NEDD4L                0.034   neural precursor cell expressed, developmentally do...
NEDD4L                0.034   neural precursor cell expressed, developmentally do...
NEDD4L                0.034   neural precursor cell expressed, developmentally do...
MAGI1                 0.031   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.031   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.031   membrane associated guanylate kinase, WW and PDZ dom...
MAML2                 0.030   mastermind-like 2 
WWP2                  0.029   WW domain containing E3 ubiquitin protein ligase 2 i...
WWP2                  0.029   WW domain containing E3 ubiquitin protein ligase 2 i...
ITCH                  0.029   itchy homolog E3 ubiquitin protein ligase 
NEDD4L                0.028   neural precursor cell expressed, developmentally do...
NEDD4L                0.028   neural precursor cell expressed, developmentally do...
NEDD4L                0.028   neural precursor cell expressed, developmentally do...
NEDD4L                0.028   neural precursor cell expressed, developmentally do...
NEDD4L                0.028   neural precursor cell expressed, developmentally do...
NEDD4                 0.028   neural precursor cell expressed, developmentally do...
NEDD4                 0.028   neural precursor cell expressed, developmentally do...
SMURF1                0.028   Smad ubiquitination regulatory factor 1 isoform 2 [H...
SMURF2                0.028   SMAD specific E3 ubiquitin protein ligase 2 
WWP1                  0.028   WW domain containing E3 ubiquitin protein ligase 1 [...
MAGI2                 0.026   membrane associated guanylate kinase, WW and PDZ dom...
SMURF1                0.026   Smad ubiquitination regulatory factor 1 isoform 1 [H...
WWC1                  0.025   WW and C2 domain containing 1 isoform 3 
WWC1                  0.025   WW and C2 domain containing 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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