Guide to the Human Genome
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Name: TRIB1 Sequence: fasta or formatted (372aa) NCBI GI: 13399328
Description:

G-protein-coupled receptor induced protein

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         31           3
 C cysteine            2.7         10           1
 D aspartate           5.4         20           2
 E glutamate           6.7         25           3
 F phenylalanine       3.8         14           2
 G glycine             6.7         25           3
 H histidine           3.2         12           1
 I isoleucine          5.6         21           1
 K lysine              4.3         16           1
 L leucine             9.7         36           3
 M methionine          1.3          5           1
 N asparagine          0.5          2           1
 P proline             8.9         33           3
 Q glutamine           2.7         10           1
 R arginine            7.5         28           2
 S serine              9.9         37           2
 T threonine           3.5         13           2
 V valine              5.4         20           1
 W tryptophan          0.5          2           1
 Y tyrosine            3.2         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G-protein-coupled receptor induced protein 
TRIB2                 0.488   tribbles homolog 2 
TRIB3                 0.354   tribbles 3 
STK40                 0.131   serine/threonine kinase 40 
PRKAA2                0.130   AMP-activated protein kinase alpha 2 catalytic subun...
BRSK1                 0.128   BR serine/threonine kinase 1 
MELK                  0.127   maternal embryonic leucine zipper kinase 
SNRK                  0.124   SNF related kinase 
SNRK                  0.124   SNF related kinase 
CAMK2B                0.124   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.124   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.124   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.124   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.124   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.124   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.124   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.124   calcium/calmodulin-dependent protein kinase II beta ...
PRKAA1                0.123   protein kinase, AMP-activated, alpha 1 catalytic sub...
CAMK2A                0.123   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.123   calcium/calmodulin-dependent protein kinase II alpha...
MARK3                 0.122   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.122   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.122   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.122   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK2                 0.120   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.120   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.120   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.120   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.120   MAP/microtubule affinity-regulating kinase 2 isoform...
BRSK2                 0.120   BR serine/threonine kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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