Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: STK40 Sequence: fasta or formatted (435aa) NCBI GI: 31543198
Description:

serine/threonine kinase 40

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         29           3
 C cysteine            1.8          8           1
 D aspartate           6.7         29           2
 E glutamate           6.2         27           2
 F phenylalanine       2.8         12           1
 G glycine             6.0         26           1
 H histidine           3.0         13           3
 I isoleucine          5.3         23           2
 K lysine              6.0         26           2
 L leucine            11.5         50           3
 M methionine          2.3         10           1
 N asparagine          2.5         11           2
 P proline             4.1         18           2
 Q glutamine           5.5         24           2
 R arginine            7.4         32           2
 S serine              8.0         35           2
 T threonine           4.1         18           1
 V valine              6.7         29           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine/threonine kinase 40 
TRIB1                 0.114   G-protein-coupled receptor induced protein 
TRIB2                 0.107   tribbles homolog 2 
NUAK1                 0.107   AMPK-related protein kinase 5 
PRKAA2                0.098   AMP-activated protein kinase alpha 2 catalytic subun...
TRIB3                 0.096   tribbles 3 
AKT2                  0.092   AKT2 kinase 
PRKAA1                0.092   protein kinase, AMP-activated, alpha 1 catalytic sub...
MELK                  0.092   maternal embryonic leucine zipper kinase 
SIK2                  0.090   SNF1-like kinase 2 
NUAK2                 0.090   NUAK family, SNF1-like kinase, 2 
CAMKK1                0.089   calcium/calmodulin-dependent protein kinase 1 alpha ...
CAMKK1                0.089   calcium/calmodulin-dependent protein kinase 1 alpha...
CAMKK1                0.089   calcium/calmodulin-dependent protein kinase 1 alpha ...
QSK                   0.088   serine/threonine-protein kinase QSK 
BRSK1                 0.088   BR serine/threonine kinase 1 
PRKAA1                0.087   protein kinase, AMP-activated, alpha 1 catalytic sub...
CAMKV                 0.087   CaM kinase-like vesicle-associated 
AKT3                  0.086   AKT3 kinase isoform 1 
AKT3                  0.086   AKT3 kinase isoform 2 
MARK4                 0.086   MAP/microtubule affinity-regulating kinase 4 
CAMK2A                0.086   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.086   calcium/calmodulin-dependent protein kinase II alpha...
CAMKK2                0.085   calcium/calmodulin-dependent protein kinase kinase 2...
MARK3                 0.085   MAP/microtubule affinity-regulating kinase 3 isofor...
PHKG2                 0.085   phosphorylase kinase, gamma 2 (testis) 
CAMK2G                0.085   calcium/calmodulin-dependent protein kinase II gamma...
AKT1                  0.085   AKT1 kinase 
AKT1                  0.085   AKT1 kinase 
AKT1                  0.085   AKT1 kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press