ABLIM1 31818

Name: ABLIM1	Sequence: fasta or formatted (455aa)		NCBI GI: 51173717
Description: actin-binding LIM protein 1 isoform s		Referenced in: LIM Domain Proteins
Other entries for this name: alt prot [778aa] actin-binding LIM protein 1 isoform a alt prot [718aa] actin-binding LIM protein 1 isoform b alt prot [746aa] actin-binding LIM protein 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 20 2 C cysteine 0.2 1 1 D aspartate 5.9 27 2 E glutamate 7.3 33 2 F phenylalanine 3.1 14 2 G glycine 5.7 26 2 H histidine 2.6 12 1 I isoleucine 5.5 25 2 K lysine 5.7 26 3 L leucine 7.0 32 2 M methionine 3.3 15 1 N asparagine 2.6 12 1 P proline 8.4 38 2 Q glutamine 4.2 19 1 R arginine 9.2 42 3 S serine 11.6 53 3 T threonine 5.1 23 2 V valine 3.1 14 2 W tryptophan 0.7 3 1 Y tyrosine 4.4 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 actin-binding LIM protein 1 isoform s ABLIM1 0.981 actin-binding LIM protein 1 isoform c ABLIM1 0.904 actin-binding LIM protein 1 isoform b ABLIM1 0.904 actin-binding LIM protein 1 isoform a ABLIM3 0.334 actin binding LIM protein family, member 3 EPB49 0.313 erythrocyte membrane protein band 4.9 isoform 1 [Ho... EPB49 0.313 erythrocyte membrane protein band 4.9 isoform 1 [Ho... EPB49 0.313 erythrocyte membrane protein band 4.9 isoform 1 [Ho... EPB49 0.282 erythrocyte membrane protein band 4.9 isoform 2 [Ho... EPB49 0.282 erythrocyte membrane protein band 4.9 isoform 2 [Ho... EPB49 0.268 erythrocyte membrane protein band 4.9 isoform 3 [Ho... ABLIM2 0.244 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.243 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.216 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.155 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.155 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.132 actin binding LIM protein family, member 2 isoform ... ABLIM2 0.132 actin binding LIM protein family, member 2 isoform ... VIL1 0.025 villin 1 ZNF609 0.018 zinc finger protein 609 AVIL 0.018 advillin SCRIB 0.016 scribble isoform a BSN 0.016 bassoon protein DGCR14 0.013 DiGeorge syndrome critical region protein 14 VILL 0.011 villin-like protein SENP1 0.010 sentrin/SUMO-specific protease 1 CEP164 0.010 centrosomal protein 164kDa TRERF1 0.009 transcriptional regulating factor 1 SVIL 0.009 supervillin isoform 2 SVIL 0.009 supervillin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.