Guide to the Human Genome
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Name: VILL Sequence: fasta or formatted (856aa) NCBI GI: 94721268
Description:

villin-like protein

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         65           3
 C cysteine            1.2         10           1
 D aspartate           4.8         41           2
 E glutamate           7.1         61           2
 F phenylalanine       4.1         35           2
 G glycine             8.8         75           3
 H histidine           3.2         27           2
 I isoleucine          3.9         33           2
 K lysine              5.3         45           2
 L leucine             9.1         78           2
 M methionine          2.0         17           2
 N asparagine          2.9         25           2
 P proline             4.3         37           2
 Q glutamine           6.4         55           2
 R arginine            6.0         51           3
 S serine              7.4         63           3
 T threonine           4.2         36           2
 V valine              6.8         58           3
 W tryptophan          2.2         19           1
 Y tyrosine            2.9         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   villin-like protein 
VIL1                  0.444   villin 1 
AVIL                  0.425   advillin 
SCIN                  0.279   scinderin isoform 1 
GSN                   0.278   gelsolin isoform a precursor 
GSN                   0.278   gelsolin isoform b 
GSN                   0.278   gelsolin isoform c 
GSN                   0.278   gelsolin isoform c 
GSN                   0.278   gelsolin isoform b 
GSN                   0.278   gelsolin isoform b 
GSN                   0.278   gelsolin isoform b 
GSN                   0.278   gelsolin isoform b 
SCIN                  0.183   scinderin isoform 2 
CAPG                  0.108   gelsolin-like capping protein 
FLII                  0.091   flightless I homolog 
SVIL                  0.080   supervillin isoform 2 
SVIL                  0.080   supervillin isoform 1 
EPB49                 0.012   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.012   erythrocyte membrane protein band 4.9 isoform 3 [Ho...
EPB49                 0.012   erythrocyte membrane protein band 4.9 isoform 2 [Ho...
EPB49                 0.012   erythrocyte membrane protein band 4.9 isoform 2 [Ho...
EPB49                 0.012   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.012   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM3                0.010   actin binding LIM protein family, member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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