Guide to the Human Genome
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Name: AVIL Sequence: fasta or formatted (819aa) NCBI GI: 17572824
Description:

advillin

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         63           3
 C cysteine            0.7          6           1
 D aspartate           6.8         56           2
 E glutamate           7.0         57           2
 F phenylalanine       4.2         34           2
 G glycine             7.6         62           2
 H histidine           2.1         17           2
 I isoleucine          5.4         44           2
 K lysine              7.0         57           2
 L leucine             8.4         69           2
 M methionine          2.3         19           1
 N asparagine          3.8         31           1
 P proline             3.9         32           2
 Q glutamine           5.6         46           2
 R arginine            4.2         34           2
 S serine              6.0         49           2
 T threonine           5.3         43           2
 V valine              6.7         55           2
 W tryptophan          2.1         17           1
 Y tyrosine            3.4         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   advillin 
VIL1                  0.621   villin 1 
VILL                  0.447   villin-like protein 
SCIN                  0.404   scinderin isoform 1 
GSN                   0.378   gelsolin isoform a precursor 
GSN                   0.378   gelsolin isoform b 
GSN                   0.378   gelsolin isoform c 
GSN                   0.378   gelsolin isoform c 
GSN                   0.378   gelsolin isoform b 
GSN                   0.378   gelsolin isoform b 
GSN                   0.378   gelsolin isoform b 
GSN                   0.378   gelsolin isoform b 
SCIN                  0.262   scinderin isoform 2 
FLII                  0.156   flightless I homolog 
CAPG                  0.142   gelsolin-like capping protein 
SVIL                  0.096   supervillin isoform 2 
SVIL                  0.096   supervillin isoform 1 
ABLIM3                0.015   actin binding LIM protein family, member 3 
EPB49                 0.011   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.011   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.011   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.011   actin binding LIM protein family, member 2 isoform ...
EPB49                 0.010   erythrocyte membrane protein band 4.9 isoform 3 [Ho...
EPB49                 0.010   erythrocyte membrane protein band 4.9 isoform 2 [Ho...
EPB49                 0.010   erythrocyte membrane protein band 4.9 isoform 2 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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