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Search of human proteins with 50592998
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50592998 delta-tubulin [Homo sapiens]
(453 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50592998 delta-tubulin [Homo sapiens] 921 0.0
gi|7706751 tubulin, gamma 2 [Homo sapiens] 159 5e-39
gi|31543831 tubulin, gamma 1 [Homo sapiens] 155 5e-38
gi|42558279 tubulin, beta 8 [Homo sapiens] 149 4e-36
gi|29788768 tubulin, beta 2B [Homo sapiens] 144 2e-34
gi|5174735 tubulin, beta, 2 [Homo sapiens] 144 2e-34
gi|4507729 tubulin, beta 2 [Homo sapiens] 144 2e-34
gi|29788785 tubulin, beta [Homo sapiens] 141 1e-33
gi|50592996 tubulin, beta, 4 [Homo sapiens] 140 3e-33
gi|21361322 tubulin, beta 4 [Homo sapiens] 139 5e-33
gi|14210536 tubulin, beta 6 [Homo sapiens] 137 2e-32
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens] 135 6e-32
gi|13562114 beta tubulin 1, class VI [Homo sapiens] 135 8e-32
gi|7705915 tubulin, epsilon 1 [Homo sapiens] 134 2e-31
gi|9507215 tubulin, alpha 8 [Homo sapiens] 120 2e-27
gi|156564363 tubulin, alpha 3d [Homo sapiens] 113 4e-25
gi|17921993 tubulin, alpha 3c [Homo sapiens] 113 4e-25
gi|14389309 tubulin alpha 6 [Homo sapiens] 112 7e-25
gi|46409270 tubulin, alpha 3e [Homo sapiens] 112 7e-25
gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens] 112 9e-25
gi|17986283 tubulin, alpha 1a [Homo sapiens] 110 2e-24
gi|17921989 tubulin, alpha 4a [Homo sapiens] 108 1e-23
gi|13376181 tubulin, alpha-like 3 [Homo sapiens] 106 4e-23
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 47 4e-05
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 47 4e-05
gi|39780571 misato [Homo sapiens] 39 0.007
gi|115334682 SNAP25-interacting protein [Homo sapiens] 32 0.91
gi|50582996 multiple C2 domains, transmembrane 1 isoform S [Homo... 32 1.5
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 32 1.5
gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens] 31 2.6
>gi|50592998 delta-tubulin [Homo sapiens]
Length = 453
Score = 921 bits (2380), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 MSIVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPI 60
MSIVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPI
Sbjct: 1 MSIVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPI 60
Query: 61 ARAVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIM 120
ARAVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIM
Sbjct: 61 ARAVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIM 120
Query: 121 NIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPYGTGEV 180
NIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPYGTGEV
Sbjct: 121 NIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPYGTGEV 180
Query: 181 IVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSVFQ 240
IVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSVFQ
Sbjct: 181 IVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSVFQ 240
Query: 241 PTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLKHLR 300
PTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLKHLR
Sbjct: 241 PTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLKHLR 300
Query: 301 QMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQSADVEG 360
QMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQSADVEG
Sbjct: 301 QMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQSADVEG 360
Query: 361 FKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWNMFASK 420
FKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWNMFASK
Sbjct: 361 FKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWNMFASK 420
Query: 421 AYIHQYTKFGIEEEDFLDSFTSLEQVVASYCNL 453
AYIHQYTKFGIEEEDFLDSFTSLEQVVASYCNL
Sbjct: 421 AYIHQYTKFGIEEEDFLDSFTSLEQVVASYCNL 453
>gi|7706751 tubulin, gamma 2 [Homo sapiens]
Length = 451
Score = 159 bits (402), Expect = 5e-39
Identities = 107/319 (33%), Positives = 174/319 (54%), Gaps = 18/319 (5%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSH-SSQGLCSMRENEAYQASCKERFFSEEENGVPIA 61
I+T+QLGQCGNQIGFE + L ++ S +G+ E K+ FF + ++ I
Sbjct: 5 IITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDR--KDVFFYQADDEHYIP 62
Query: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQG--SGNNWAYGYSVHGPRHEESI 119
RAVL+D+EP+VI+ +L+ Y + + G +GNNWA G+S G + E I
Sbjct: 63 RAVLLDLEPRVIHSILNSPYAK---LYNPENIYLSEHGGGAGNNWASGFS-QGEKIHEDI 118
Query: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY--GT 177
+II +E + DS GF + S+AGGTGSGLG+++ + L D+Y L ++PY
Sbjct: 119 FDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEM 178
Query: 178 GEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGS 237
+V+VQ YNS+LTL L +++D +++ +N A+++I ++I+ SFS INQ+++ +
Sbjct: 179 SDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVS----T 234
Query: 238 VFQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
+ + + Y N L L+ L+P P L P ++ S+A T +L
Sbjct: 235 IMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKT--TVLD 292
Query: 298 HLRQML-ISNAKMEEGIDR 315
+R++L N + G DR
Sbjct: 293 VMRRLLQPKNVMVSTGRDR 311
>gi|31543831 tubulin, gamma 1 [Homo sapiens]
Length = 451
Score = 155 bits (393), Expect = 5e-38
Identities = 106/319 (33%), Positives = 173/319 (54%), Gaps = 18/319 (5%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSH-SSQGLCSMRENEAYQASCKERFFSEEENGVPIA 61
I+T+QLGQCGNQIGFE + L ++ S +G+ E K+ FF + ++ I
Sbjct: 5 IITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDR--KDVFFYQADDEHYIP 62
Query: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQG--SGNNWAYGYSVHGPRHEESI 119
RAVL+D+EP+VI+ +L+ Y + + G +GNNWA G+S G + E I
Sbjct: 63 RAVLLDLEPRVIHSILNSPYAK---LYNPENIYLSEHGGGAGNNWASGFS-QGEKIHEDI 118
Query: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY--GT 177
+II +E + DS GF + S+AGGTGSGLG+++ + L D+Y L ++P
Sbjct: 119 FDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEM 178
Query: 178 GEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGS 237
+V+VQ YNS+LTL L +++D +++ +N A+++I ++I+ SFS INQ+++ +
Sbjct: 179 SDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVS----T 234
Query: 238 VFQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
+ + + Y N L L+ L+P P L P ++ S+A T +L
Sbjct: 235 IMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKT--TVLD 292
Query: 298 HLRQML-ISNAKMEEGIDR 315
+R++L N + G DR
Sbjct: 293 VMRRLLQPKNVMVSTGRDR 311
>gi|42558279 tubulin, beta 8 [Homo sapiens]
Length = 444
Score = 149 bits (377), Expect = 4e-36
Identities = 115/454 (25%), Positives = 206/454 (45%), Gaps = 41/454 (9%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
IV Q+GQCGNQIG + ++ ++SD H+ + + Q +++E G + R
Sbjct: 4 IVLTQIGQCGNQIGAKFWE-VISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYVPR 62
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
AVLVD+EP ++ + ++ GQ + F Q G+GNNWA G+ G ES+M++
Sbjct: 63 AVLVDLEPGTMDSV--RSGPFGQVFRPDNFIFGQC-GAGNNWAKGHYTEGAELMESVMDV 119
Query: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGEVI 181
+RKE E CD GF + S+ GGTGSG+G + + ++Y + + I P + +
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTV 179
Query: 182 VQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV--- 238
V+ YN+ L++ L ++D +N+A++ IC+K + + ++ D+N +++ + V
Sbjct: 180 VEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTC 239
Query: 239 --FQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLL 296
F +A+ L L ++VP P P S S Y T A L
Sbjct: 240 LRFPGQLNAD---------LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAEL- 289
Query: 297 KHLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQSA 356
+QM + M RH + L + +R D Q
Sbjct: 290 --TQQMFDAKNMMAACDPRH----------------GRYLTAAAIFRGRMPMREVDEQMF 331
Query: 357 DVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWNM 416
+++ K+ + + WL N + SA + N+ + + + + M
Sbjct: 332 NIQD-KNSSYFADWLP--NNVKTAVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAM 388
Query: 417 FASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
F KA++H YT G++E +F ++ +++ +V+ Y
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
>gi|29788768 tubulin, beta 2B [Homo sapiens]
Length = 445
Score = 144 bits (363), Expect = 2e-34
Identities = 110/455 (24%), Positives = 203/455 (44%), Gaps = 43/455 (9%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
IV +Q GQCGNQIG + ++ ++SD H S + Q +++E + R
Sbjct: 4 IVHIQAGQCGNQIGAKFWE-VISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPR 62
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
A+LVD+EP ++ + ++ GQ + F Q G+GNNWA G+ G +S++++
Sbjct: 63 AILVDLEPGTMDSV--RSGPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDV 119
Query: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGEVI 181
+RKE E CD GF + S+ GGTGSG+G + + ++Y + + + P + +
Sbjct: 120 VRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTV 179
Query: 182 VQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV--- 238
V+ YN+ L++ L ++D +N+A++ IC + + + ++ D+N +++ + V
Sbjct: 180 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239
Query: 239 --FQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLL 296
F +A+ L L ++VP P P S S Y T +
Sbjct: 240 LRFPGQLNAD---------LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT----V 286
Query: 297 KHLRQMLISNAKMEEGID-RHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQS 355
L Q + + M D RH + L + ++ D Q
Sbjct: 287 PELTQQMFDSKNMMAACDPRH----------------GRYLTVAAIFRGRMSMKEVDEQM 330
Query: 356 ADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWN 415
+V+ K+ + + W+ N + SA + NS + + I +
Sbjct: 331 LNVQN-KNSSYFVEWIP--NNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
Query: 416 MFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
MF KA++H YT G++E +F ++ +++ +V+ Y
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
>gi|5174735 tubulin, beta, 2 [Homo sapiens]
Length = 445
Score = 144 bits (362), Expect = 2e-34
Identities = 111/455 (24%), Positives = 203/455 (44%), Gaps = 43/455 (9%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
IV +Q GQCGNQIG + ++ ++SD H + + Q +++E G + R
Sbjct: 4 IVHLQAGQCGNQIGAKFWE-VISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPR 62
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
AVLVD+EP ++ + ++ GQ + F Q G+GNNWA G+ G +S++++
Sbjct: 63 AVLVDLEPGTMDSV--RSGPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDV 119
Query: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGEVI 181
+RKE E CD GF + S+ GGTGSG+G + + ++Y + + + P + +
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 182 VQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV--- 238
V+ YN+ L++ L ++D +N+A++ IC + + + ++ D+N +++ + V
Sbjct: 180 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239
Query: 239 --FQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLL 296
F +A+ L L ++VP P P S S Y T +
Sbjct: 240 LRFPGQLNAD---------LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT----V 286
Query: 297 KHLRQMLISNAKMEEGID-RHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQS 355
L Q + M D RH + L + ++ D Q
Sbjct: 287 PELTQQMFDAKNMMAACDPRH----------------GRYLTVAAVFRGRMSMKEVDEQM 330
Query: 356 ADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWN 415
+V+ K+ + + W+ N + SA + NS + + I +
Sbjct: 331 LNVQN-KNSSYFVEWIP--NNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
Query: 416 MFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
MF KA++H YT G++E +F ++ +++ +V+ Y
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
>gi|4507729 tubulin, beta 2 [Homo sapiens]
Length = 445
Score = 144 bits (362), Expect = 2e-34
Identities = 110/455 (24%), Positives = 203/455 (44%), Gaps = 43/455 (9%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
IV +Q GQCGNQIG + ++ ++SD H S + Q +++E + R
Sbjct: 4 IVHIQAGQCGNQIGAKFWE-VISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPR 62
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
A+LVD+EP ++ + ++ GQ + F Q G+GNNWA G+ G +S++++
Sbjct: 63 AILVDLEPGTMDSV--RSGPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDV 119
Query: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGEVI 181
+RKE E CD GF + S+ GGTGSG+G + + ++Y + + + P + +
Sbjct: 120 VRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTV 179
Query: 182 VQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV--- 238
V+ YN+ L++ L ++D +N+A++ IC + + + ++ D+N +++ + V
Sbjct: 180 VEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239
Query: 239 --FQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLL 296
F +A+ L L ++VP P P S S Y T +
Sbjct: 240 LRFPGQLNAD---------LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT----V 286
Query: 297 KHLRQMLISNAKMEEGID-RHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQS 355
L Q + + M D RH + L + ++ D Q
Sbjct: 287 PELTQQMFDSKNMMAACDPRH----------------GRYLTVAAIFRGRMSMKEVDEQM 330
Query: 356 ADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWN 415
+V+ K+ + + W+ N + SA + NS + + I +
Sbjct: 331 LNVQN-KNSSYFVEWIP--NNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
Query: 416 MFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
MF KA++H YT G++E +F ++ +++ +V+ Y
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
>gi|29788785 tubulin, beta [Homo sapiens]
Length = 444
Score = 141 bits (355), Expect = 1e-33
Identities = 108/455 (23%), Positives = 202/455 (44%), Gaps = 43/455 (9%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
IV +Q GQCGNQIG + ++ ++SD H + + Q +++E G + R
Sbjct: 4 IVHIQAGQCGNQIGAKFWE-VISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPR 62
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
A+LVD+EP ++ + ++ GQ + F Q G+GNNWA G+ G +S++++
Sbjct: 63 AILVDLEPGTMDSV--RSGPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDV 119
Query: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGEVI 181
+RKE E CD GF + S+ GGTGSG+G + + ++Y + + + P + +
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 182 VQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV--- 238
V+ YN+ L++ L ++D +N+A++ IC + + + ++ D+N +++ + V
Sbjct: 180 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239
Query: 239 --FQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLL 296
F +A+ L L ++VP P P S S Y T +
Sbjct: 240 LRFPGQLNAD---------LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT----V 286
Query: 297 KHLRQMLISNAKMEEGID-RHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQS 355
L Q + M D RH + L + ++ D Q
Sbjct: 287 PELTQQVFDAKNMMAACDPRH----------------GRYLTVAAVFRGRMSMKEVDEQM 330
Query: 356 ADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWN 415
+V+ K+ + + W+ N + + + NS + + I +
Sbjct: 331 LNVQN-KNSSYFVEWIP--NNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTA 387
Query: 416 MFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
MF KA++H YT G++E +F ++ +++ +V+ Y
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
>gi|50592996 tubulin, beta, 4 [Homo sapiens]
Length = 450
Score = 140 bits (352), Expect = 3e-33
Identities = 109/451 (24%), Positives = 203/451 (45%), Gaps = 35/451 (7%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
IV +Q GQCGNQIG + ++ ++SD H + + Q +++E + + R
Sbjct: 4 IVHIQAGQCGNQIGAKFWE-VISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPR 62
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
A+LVD+EP ++ + S A G + F Q G+GNNWA G+ G +S++++
Sbjct: 63 AILVDLEPGTMDSVRSGAF--GHLFRPDNFIFGQS-GAGNNWAKGHYTEGAELVDSVLDV 119
Query: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGEVI 181
+RKE E CD GF + S+ GGTGSG+G + + ++Y + + + P + +
Sbjct: 120 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 182 VQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSVFQP 241
V+ YN+ L++ L ++D +N+A++ IC + + + ++ D+N +++ + V
Sbjct: 180 VEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGV--- 236
Query: 242 TYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLKHLR 300
+ F + N L L ++VP P P + S Y T + L
Sbjct: 237 --TTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALT----VPELT 290
Query: 301 QMLISNAKMEEGID-RHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQSADVE 359
Q + M D RH + L T + ++ D Q ++
Sbjct: 291 QQMFDAKNMMAACDPRH----------------GRYLTVATVFRGRMSMKEVDEQMLAIQ 334
Query: 360 GFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWNMFAS 419
K+ + + W+ N V + S+ + NS + + I + MF
Sbjct: 335 S-KNSSYFVEWIP--NNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 420 KAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
KA++H YT G++E +F ++ +++ +V+ Y
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
>gi|21361322 tubulin, beta 4 [Homo sapiens]
Length = 444
Score = 139 bits (350), Expect = 5e-33
Identities = 108/455 (23%), Positives = 202/455 (44%), Gaps = 43/455 (9%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
IV +Q GQCGNQIG + ++ ++SD H + + Q +++E G + R
Sbjct: 4 IVHLQAGQCGNQIGAKFWE-VISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPR 62
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
AVLVD+EP ++ + ++ GQ + F Q G+GNNWA G+ G ++++++
Sbjct: 63 AVLVDLEPGTMDSV--RSGPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDAVLDV 119
Query: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGEVI 181
+RKE E CD GF + S+ GGTGSG+G + + +++ + + + P + +
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTV 179
Query: 182 VQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV--- 238
V+ YN+ L++ L ++D +N+A++ IC + + + ++ D+N +++ + V
Sbjct: 180 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239
Query: 239 --FQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLL 296
F +A+ L L ++VP P P S S Y T +
Sbjct: 240 LRFPGQLNAD---------LRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT----V 286
Query: 297 KHLRQMLISNAKMEEGID-RHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQS 355
L Q + M D RH + L + ++ D Q
Sbjct: 287 PELTQQMFDAKNMMAACDPRH----------------GRYLTVAAVFRGRMSMKEVDEQM 330
Query: 356 ADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWN 415
V+ K+ + + W+ N + +A + NS + + I +
Sbjct: 331 LSVQS-KNSSYFVEWIP--NNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTA 387
Query: 416 MFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
MF KA++H YT G++E +F ++ +++ +V+ Y
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
>gi|14210536 tubulin, beta 6 [Homo sapiens]
Length = 446
Score = 137 bits (346), Expect = 2e-32
Identities = 106/451 (23%), Positives = 203/451 (45%), Gaps = 35/451 (7%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
IV +Q GQCGNQIG + ++ ++SD H + A Q +++E + + R
Sbjct: 4 IVHIQAGQCGNQIGTKFWE-VISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYVPR 62
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
A LVD+EP ++ + ++ GQ + F Q G+GNNWA G+ G ++++++
Sbjct: 63 AALVDLEPGTMDSV--RSGPFGQLFRPDNFIFGQT-GAGNNWAKGHYTEGAELVDAVLDV 119
Query: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGEVI 181
+RKE E CD GF + S+ GGTGSG+G + + +++ + + + P + +
Sbjct: 120 VRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTV 179
Query: 182 VQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSVFQP 241
V+ YN+ L++ L ++D +N+A++ IC + + + ++ D+N +++ + V
Sbjct: 180 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGV--- 236
Query: 242 TYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLKHLR 300
+ F + N L L ++VP P P S S Y T + L
Sbjct: 237 --TTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT----VPELT 290
Query: 301 QMLISNAKMEEGID-RHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQSADVE 359
Q + M D RH + L T + ++ D Q ++
Sbjct: 291 QQMFDARNMMAACDPRH----------------GRYLTVATVFRGPMSMKEVDEQMLAIQ 334
Query: 360 GFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWNMFAS 419
K+ + + W+ N V + ++ + NS + + I + MF
Sbjct: 335 S-KNSSYFVEWIP--NNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRR 391
Query: 420 KAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
KA++H +T G++E +F ++ +++ +V+ Y
Sbjct: 392 KAFLHWFTGEGMDEMEFTEAESNMNDLVSEY 422
>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
Length = 434
Score = 135 bits (341), Expect = 6e-32
Identities = 110/455 (24%), Positives = 205/455 (45%), Gaps = 44/455 (9%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
+V Q GQCGNQIG + ++ ++SD H+ + + Q E G ++R
Sbjct: 4 LVLTQTGQCGNQIGAKFWE-VISDEHAIDSAGTYHGDSHLQLERINVHHHEASGGRYVSR 62
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMNI 122
AVLVD+EP ++ + ++ GQ + ++ G+GNNWA G G ES+M++
Sbjct: 63 AVLVDLEPGTMDSV--RSGPFGQ-VFRPDNFISRQCGAGNNWAKGRYTEGAELTESVMDV 119
Query: 123 IRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSL--KMNQIIWPYGTGEV 180
+RKE E CD GF + S+ GGTGSG+G + + ++Y + + ++ ++ P +
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIWEEYPDRIINTLSILLLP-KVSDT 178
Query: 181 IVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV-- 238
+V+ YN+ L++ L ++D +N+A++ IC++ + + ++ D+N +++ + V
Sbjct: 179 VVEPYNATLSVHQLIENADETFCIDNEALYDICSRTLKLPTPTYGDLNHLVSATMSGVTT 238
Query: 239 ---FQPTYSAESSFHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGL 295
F +A+ L L ++VP P P S S Y T A L
Sbjct: 239 CLCFPDQLNAD---------LRKLAMNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAEL 289
Query: 296 LKHLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGKDVQS 355
+QM + M RH + L + +R D Q
Sbjct: 290 ---TQQMFDAKNMMAARDPRH----------------GRYLTAAAIFQGRMPMREVDEQM 330
Query: 356 ADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWN 415
+++ K+ + + W P N + K +V + + V+ L + +
Sbjct: 331 FNIQD-KNSSYFADWF-PNNVKTAVCDIPPWGL--KMSVTFTGNNTAVQELKRVSEQFTA 386
Query: 416 MFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
F KA++H YT G++E +F ++ +++ +V+ Y
Sbjct: 387 TFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 421
>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
Length = 451
Score = 135 bits (340), Expect = 8e-32
Identities = 108/460 (23%), Positives = 202/460 (43%), Gaps = 53/460 (11%)
Query: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
IV +Q+GQCGNQIG + ++ ++ + H S R A Q +++E + R
Sbjct: 4 IVHIQIGQCGNQIGAKFWE-MIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYVPR 62
Query: 63 AVLVDMEPKVINQMLSKAA----QSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEES 118
AVLVD+EP ++ + S Q + +G G+GNNWA G+ G E+
Sbjct: 63 AVLVDLEPGTMDSIRSSKLGALFQPDSFVHGN-------SGAGNNWAKGHYTEGAELIEN 115
Query: 119 IMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GT 177
++ ++R E E CD GF I+ S+ GGTGSG+G + + ++Y + + + + P
Sbjct: 116 VLEVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKV 175
Query: 178 GEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGS 237
+ +V+ YN++L++ L ++DA +N+A++ IC + + + ++ D+N +++ +
Sbjct: 176 SDTVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSG 235
Query: 238 VFQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLL 296
+ + F + N L L ++VP P P ++ S Y + A L
Sbjct: 236 I-----TTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAEL- 289
Query: 297 KHLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGK----- 351
+QM + M DL + I RGK
Sbjct: 290 --TQQMFDARNTMAA----------------------CDLRRGRYLTVACIFRGKMSTKE 325
Query: 352 -DVQSADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIV 410
D Q V+ ++ + + W+ N V +A + N+ + + + +
Sbjct: 326 VDQQLLSVQ-TRNSSCFVEWIP--NNVKVAVCDIPPRGLSMAATFIGNNTAIQEIFNRVS 382
Query: 411 GKAWNMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
MF KA++H YT G++ +F ++ ++ +V+ Y
Sbjct: 383 EHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVSEY 422
>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
Length = 475
Score = 134 bits (336), Expect = 2e-31
Identities = 129/482 (26%), Positives = 212/482 (43%), Gaps = 61/482 (12%)
Query: 4 VTVQLGQCGNQIGFEVFDALLSDSHS-------SQGLCSMRENEAYQASCKERFFSEEEN 56
V VQ+GQCGNQIG +D L + + + + S N + S+ +
Sbjct: 5 VVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSISKGKI 64
Query: 57 GVPIARAVLVDMEPKVINQMLSKAAQSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHE 116
ARAVL+DME V+N++L + + GSGNNWA G+ V G ++
Sbjct: 65 CSLKARAVLIDMEEGVVNEILQGPLRD---VFDTKQLITDISGSGNNWAVGHKVFGSLYQ 121
Query: 117 ESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPYG 176
+ I+ RK E CD FFII SM GGTGSGLG F+ + LED++ + I+P G
Sbjct: 122 DQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSG 181
Query: 177 TGEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLG 236
+VI YNSIL + L +D +L +N ++ I +K+ D+ V + +LG
Sbjct: 182 EDDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKI---------DL-MVNSGKLG 231
Query: 237 SVFQPTYSAESS-----------FHYRRNPLGDLMEHLVPHPEFKMLSVRNIPHMSENSL 285
+ +P SS F N + +L+ +L F+ ++ +S N +
Sbjct: 232 TTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLV 291
Query: 286 AYTTFTWAGLLKHLRQMLISNAKMEEGIDRHVWP-----PLSGLPPLSKMSLNKDLHFNT 340
+ L ++ S + D ++ P S L D +
Sbjct: 292 PF---------PQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSL 342
Query: 341 SIANLVILRGKDVQSAD----VEGFKDPALYTSWLKPVNAFNVWKTQRAFSK---YEKSA 393
+A +++RG +VQ +D +E K + SW + WKT + S
Sbjct: 343 YLACALMVRG-NVQISDLRRNIERLKPSLQFVSWNQ-----EGWKTSLCSVPPVGHSHSL 396
Query: 394 VLVSNSQFLVKPLDM-IVGKAWNMFASKAYIHQYTKF-GIEEEDFLDSFTSLEQVVASYC 451
+ ++N+ VKP M + + ++ KA++H Y + G+EE F ++ +SL ++ Y
Sbjct: 397 LALANNT-CVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYD 455
Query: 452 NL 453
L
Sbjct: 456 QL 457
>gi|9507215 tubulin, alpha 8 [Homo sapiens]
Length = 449
Score = 120 bits (302), Expect = 2e-27
Identities = 112/455 (24%), Positives = 204/455 (44%), Gaps = 35/455 (7%)
Query: 4 VTVQLGQCGNQIGFEVFDAL-LSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
++V +GQ G QIG ++ L + G + ++ FFSE NG + R
Sbjct: 5 ISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGKHVPR 64
Query: 63 AVLVDMEPKVINQMLSKAAQSGQWKYGQHA--CFCQKQGSGNNWAYGYSVHGPRHEESIM 120
AV++D+EP V++++ ++G ++ H K+ + NN+A G+ G + ++
Sbjct: 65 AVMIDLEPTVVDEV-----RAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVL 119
Query: 121 NIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTGE 179
+ IRK + C GF I S GGTGSG + + + L Y K+ I+P
Sbjct: 120 DRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVST 179
Query: 180 VIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSVF 239
+V+ YNSILT SD + +N+AI+ IC + ++I++ +++++N++++ + S+
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI- 238
Query: 240 QPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLKH 298
+A F N L + +LVP+P V P +S + + A +
Sbjct: 239 ----TASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSS 294
Query: 299 LRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKD-LHFNTSIANLVILRGKDVQSAD 357
+ N++M + RH G M D + + ++A I + +Q D
Sbjct: 295 CFE---PNSQMVKCDPRH------GKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVD 345
Query: 358 --VEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAWN 415
GFK Y V ++ K QRA ++SN+ + + + K
Sbjct: 346 WCPTGFKVGINYQP-PTVVPGGDLAKVQRA-------VCMLSNTTAIAEAWARLDHKFDL 397
Query: 416 MFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
M+A +A++H Y G+EE +F ++ L + Y
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
>gi|156564363 tubulin, alpha 3d [Homo sapiens]
Length = 450
Score = 113 bits (282), Expect = 4e-25
Identities = 113/456 (24%), Positives = 194/456 (42%), Gaps = 37/456 (8%)
Query: 4 VTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKE--RFFSEEENGVPIA 61
+++ +GQ G QIG ++ L H Q M ++ FFSE G +
Sbjct: 5 ISIHVGQAGVQIGNACWE-LYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 63
Query: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHA--CFCQKQGSGNNWAYGYSVHGPRHEESI 119
RAV VD+EP V++++ ++G ++ H K+ + NN+A G+ G + +
Sbjct: 64 RAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 118
Query: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTG 178
++ IRK + C GF I S GGTGSG + + + L Y K+ I+P
Sbjct: 119 LDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVS 178
Query: 179 EVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV 238
+V+ YNSILT SD + +N+AI+ IC + ++I++ +++++N+++ + S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 238
Query: 239 FQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
+A F N L + +LVP+P P +S + +
Sbjct: 239 -----TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH---------E 284
Query: 298 HLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDL---HFNTSIANLVILRGKDVQ 354
L I+NA E P G M D+ N +IA + R
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 355 SADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAW 414
GFK Y V ++ K QRA ++SN+ + + + K
Sbjct: 345 DWCPTGFKVGINYQP-PTVVPGGDLAKVQRA-------VCMLSNTTAIAEAWARLDHKFD 396
Query: 415 NMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
M+A +A++H Y G+EE +F ++ L + Y
Sbjct: 397 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
>gi|17921993 tubulin, alpha 3c [Homo sapiens]
Length = 450
Score = 113 bits (282), Expect = 4e-25
Identities = 113/456 (24%), Positives = 194/456 (42%), Gaps = 37/456 (8%)
Query: 4 VTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKE--RFFSEEENGVPIA 61
+++ +GQ G QIG ++ L H Q M ++ FFSE G +
Sbjct: 5 ISIHVGQAGVQIGNACWE-LYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 63
Query: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHA--CFCQKQGSGNNWAYGYSVHGPRHEESI 119
RAV VD+EP V++++ ++G ++ H K+ + NN+A G+ G + +
Sbjct: 64 RAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 118
Query: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTG 178
++ IRK + C GF I S GGTGSG + + + L Y K+ I+P
Sbjct: 119 LDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVS 178
Query: 179 EVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV 238
+V+ YNSILT SD + +N+AI+ IC + ++I++ +++++N+++ + S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 238
Query: 239 FQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
+A F N L + +LVP+P P +S + +
Sbjct: 239 -----TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH---------E 284
Query: 298 HLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDL---HFNTSIANLVILRGKDVQ 354
L I+NA E P G M D+ N +IA + R
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 355 SADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAW 414
GFK Y V ++ K QRA ++SN+ + + + K
Sbjct: 345 DWCPTGFKVGINYQP-PTVVPGGDLAKVQRA-------VCMLSNTTAIAEAWARLDHKFD 396
Query: 415 NMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
M+A +A++H Y G+EE +F ++ L + Y
Sbjct: 397 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
>gi|14389309 tubulin alpha 6 [Homo sapiens]
Length = 449
Score = 112 bits (280), Expect = 7e-25
Identities = 112/456 (24%), Positives = 196/456 (42%), Gaps = 37/456 (8%)
Query: 4 VTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKE--RFFSEEENGVPIA 61
+++ +GQ G QIG ++ L H Q M ++ FFSE G +
Sbjct: 5 ISIHVGQAGVQIGNACWE-LYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 63
Query: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHA--CFCQKQGSGNNWAYGYSVHGPRHEESI 119
RAV VD+EP VI+++ ++G ++ H K+ + NN+A G+ G + +
Sbjct: 64 RAVFVDLEPTVIDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLV 118
Query: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTG 178
++ IRK ++C GF + S GGTGSG + + + L Y K+ I+P
Sbjct: 119 LDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 178
Query: 179 EVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV 238
+V+ YNSILT SD + +N+AI+ IC + ++I++ +++++N++++ + S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI 238
Query: 239 FQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
+A F N L + +LVP+P P +S + T A
Sbjct: 239 -----TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAE--- 290
Query: 298 HLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDL---HFNTSIANLVILRGKDVQ 354
I+NA E P G + D+ N +IA + R
Sbjct: 291 ------ITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 355 SADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAW 414
GFK Y V ++ K QRA ++SN+ + + + K
Sbjct: 345 DWCPTGFKVGINYQP-PTVVPGGDLAKVQRA-------VCMLSNTTAVAEAWARLDHKFD 396
Query: 415 NMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
M+A +A++H Y G+EE +F ++ + + Y
Sbjct: 397 LMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
>gi|46409270 tubulin, alpha 3e [Homo sapiens]
Length = 450
Score = 112 bits (280), Expect = 7e-25
Identities = 112/445 (25%), Positives = 192/445 (43%), Gaps = 37/445 (8%)
Query: 4 VTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKE--RFFSEEENGVPIA 61
+++ +GQ G QIG ++ L H Q M ++ FFSE G +
Sbjct: 5 ISIHVGQAGVQIGNACWE-LYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 63
Query: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHA--CFCQKQGSGNNWAYGYSVHGPRHEESI 119
RAV VD+EP V++++ ++G ++ H K+ + +N+A G+ G + +
Sbjct: 64 RAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLV 118
Query: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTG 178
++ IRK + C GF I S GGTGSG + + + L YS K+ I+P
Sbjct: 119 LDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVS 178
Query: 179 EVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV 238
+V+ YNSILT SD + +N+AI+ IC + ++I++ +++++N+++ + S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 238
Query: 239 FQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
+A F N L + +LVP+P P +S + +
Sbjct: 239 -----TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH---------E 284
Query: 298 HLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDL---HFNTSIANLVILRGKDVQ 354
L I+NA E P G M D+ N +IA + R
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 355 SADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAW 414
GFK Y V ++ K QRA ++SN+ + + +V K
Sbjct: 345 DWCPTGFKVGINYQP-PTVVPGGDLAKVQRA-------VCMLSNTTAIAEAWARLVHKFD 396
Query: 415 NMFASKAYIHQYTKFGIEEEDFLDS 439
M+A A++H Y G+EE +F ++
Sbjct: 397 LMYAKWAFVHWYVGEGMEEGEFSEA 421
>gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]
Length = 451
Score = 112 bits (279), Expect = 9e-25
Identities = 111/456 (24%), Positives = 196/456 (42%), Gaps = 37/456 (8%)
Query: 4 VTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKE--RFFSEEENGVPIA 61
+++ +GQ G QIG ++ L H Q M ++ FFSE G +
Sbjct: 5 ISIHVGQAGVQIGNACWE-LYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 63
Query: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHA--CFCQKQGSGNNWAYGYSVHGPRHEESI 119
RAV VD+EP VI+++ ++G ++ H K+ + NN+A G+ G + +
Sbjct: 64 RAVFVDLEPTVIDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLV 118
Query: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTG 178
++ IRK ++C GF + S GGTGSG + + + L Y K+ I+P
Sbjct: 119 LDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 178
Query: 179 EVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV 238
+V+ YNSILT SD + +N+AI+ IC + ++I++ +++++N++++ + S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI 238
Query: 239 FQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
+A F N L + +LVP+P P +S + +
Sbjct: 239 -----TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH---------E 284
Query: 298 HLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDL---HFNTSIANLVILRGKDVQ 354
L I+NA E P G + D+ N +IA + R
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFV 344
Query: 355 SADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAW 414
GFK Y V ++ K QRA ++SN+ + + + K
Sbjct: 345 DWCPTGFKVGINYQP-PTVVPGGDLAKVQRA-------VCMLSNTTAIAEAWARLDHKFD 396
Query: 415 NMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
M+A +A++H Y G+EE +F ++ + + Y
Sbjct: 397 LMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
>gi|17986283 tubulin, alpha 1a [Homo sapiens]
Length = 451
Score = 110 bits (276), Expect = 2e-24
Identities = 111/456 (24%), Positives = 195/456 (42%), Gaps = 37/456 (8%)
Query: 4 VTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKE--RFFSEEENGVPIA 61
+++ +GQ G QIG ++ L H Q M ++ FFSE G +
Sbjct: 5 ISIHVGQAGVQIGNACWE-LYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 63
Query: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHA--CFCQKQGSGNNWAYGYSVHGPRHEESI 119
RAV VD+EP VI+++ ++G ++ H K+ + NN+A G+ G + +
Sbjct: 64 RAVFVDLEPTVIDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLV 118
Query: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTG 178
++ IRK ++C GF + S GGTGSG + + + L Y K+ I+P
Sbjct: 119 LDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 178
Query: 179 EVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV 238
+V+ YNSILT SD + +N+AI+ IC + ++I++ +++++N+++ + S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 238
Query: 239 FQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
+A F N L + +LVP+P P +S + +
Sbjct: 239 -----TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH---------E 284
Query: 298 HLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDL---HFNTSIANLVILRGKDVQ 354
L I+NA E P G + D+ N +IA + R
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFV 344
Query: 355 SADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAW 414
GFK Y V ++ K QRA ++SN+ + + + K
Sbjct: 345 DWCPTGFKVGINYQP-PTVVPGGDLAKVQRA-------VCMLSNTTAIAEAWARLDHKFD 396
Query: 415 NMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
M+A +A++H Y G+EE +F ++ + + Y
Sbjct: 397 LMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
>gi|17921989 tubulin, alpha 4a [Homo sapiens]
Length = 448
Score = 108 bits (269), Expect = 1e-23
Identities = 110/456 (24%), Positives = 195/456 (42%), Gaps = 37/456 (8%)
Query: 4 VTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKE--RFFSEEENGVPIA 61
++V +GQ G Q+G ++ L H Q M ++ FF E G +
Sbjct: 5 ISVHVGQAGVQMGNACWE-LYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVP 63
Query: 62 RAVLVDMEPKVINQMLSKAAQSGQWKYGQHA--CFCQKQGSGNNWAYGYSVHGPRHEESI 119
RAV VD+EP VI+++ ++G ++ H K+ + NN+A G+ G + +
Sbjct: 64 RAVFVDLEPTVIDEI-----RNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPV 118
Query: 120 MNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GTG 178
++ IRK ++C GF + S GGTGSG + + + L Y K+ I+P
Sbjct: 119 LDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 178
Query: 179 EVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGSV 238
+V+ YNSILT SD + +N+AI+ IC + ++I++ +++++N++++ + S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI 238
Query: 239 FQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLLK 297
+A F N L + +LVP+P P +S + +
Sbjct: 239 -----TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYH---------E 284
Query: 298 HLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDL---HFNTSIANLVILRGKDVQ 354
L I+NA E P G + D+ N +IA + R
Sbjct: 285 QLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFV 344
Query: 355 SADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIVGKAW 414
GFK Y V ++ K QRA ++SN+ + + + K
Sbjct: 345 DWCPTGFKVGINYQP-PTVVPGGDLAKVQRA-------VCMLSNTTAIAEAWARLDHKFD 396
Query: 415 NMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
M+A +A++H Y G+EE +F ++ + + Y
Sbjct: 397 LMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
>gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
Length = 446
Score = 106 bits (265), Expect = 4e-23
Identities = 107/472 (22%), Positives = 196/472 (41%), Gaps = 62/472 (13%)
Query: 4 VTVQLGQCGNQIGFEVFDAL-LSDSHSSQGLCSMRENEAYQASCKER-------FFSEEE 55
+++ +GQ G QIG ++ L G+ + + + + E FF E
Sbjct: 5 LSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFFCETR 64
Query: 56 NGVPIARAVLVDMEPKVINQMLSKAAQSGQWK--YGQHACFCQKQGSGNNWAYGYSVHGP 113
G + RA+ VD+EP VI+ + ++GQ + + K+ + NN+A G G
Sbjct: 65 AGKHVPRALFVDLEPTVIDGI-----RTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
Query: 114 RHEESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIW 173
+ ++ RK E+C GF I S GGTGSG + + + L +YS K+ ++
Sbjct: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
Query: 174 PY-GTGEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLA 232
P +V+ YNS+LT +D + +N+A++ IC + + ++ S + IN+++
Sbjct: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
Query: 233 HQLGSVFQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFT 291
+ S+ +A F N L + +LVP+P P +S + + F+
Sbjct: 240 QVVSSI-----TASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFS 294
Query: 292 WAGLLKHLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRG- 350
+ I+ A E S + D +A ++ RG
Sbjct: 295 VSD---------ITTACFES----------------SNQLVKCDPRLGKYMACCLLYRGD 329
Query: 351 ---KDVQSA-DVEGFKDPALYTSWLKPVNAFNVWKTQRA--------FSKYEKSAVLVSN 398
K+V +A + + W F V R +K +S ++SN
Sbjct: 330 VVPKEVNAAIAATKSRHSVQFVDWCP--TGFKVGINNRPPTVMPGGDLAKVHRSICMLSN 387
Query: 399 SQFLVKPLDMIVGKAWNMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
+ +V+ + K M+A +A++H Y + G+EE +FL++ L + Y
Sbjct: 388 TTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLEAREDLAALERDY 439
>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 47.0 bits (110), Expect = 4e-05
Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 44/364 (12%)
Query: 91 HACFCQKQGSGNNWAYGYSVHGPRHEESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGL 150
H+ +G+G+ + + P E IM+ KE E CD GF + S+ GTGSG+
Sbjct: 28 HSMDLPSEGTGDKYVPPTILVDP--EPGIMD--SKEAESCDCLQGFQLTHSLGEGTGSGM 83
Query: 151 GAFVTQNLEDQYSNSLKMNQIIWP----YGTGEVIVQNYNSILTLSHLYRSSDALLLHEN 206
G + + ++ + + + P +GT + + ++ L + L ++D +
Sbjct: 84 GTLLHSKIREEDPDHIMNTSSVMPSLKVFGT---VAEPCSAXLPIHPLVENTDETCGTDI 140
Query: 207 DAIHKICAKLMNIKQISFSDINQVLAHQLGSVFQPTYSAESSFHYRRNPLGDLMEHLVPH 266
+A + I + + + ++ D L H + + + + H + L L + V
Sbjct: 141 EAPYNIRFRTLELTTQNYED----LTHXVSANMRGVTTFLCFPHQLNSDLCKLAVNTVSF 196
Query: 267 PEFKMLSVRNIPHMSENSLAYTTFTWAGLLKHLRQMLISNAKMEEGIDRHVWPPLSGLPP 326
P + P S S Y T + L Q + M PP GLP
Sbjct: 197 PRLQFFMATFAPLTSCGSQLYRALT----MPKLTQQVFDAKNMMAA------PP--GLP- 243
Query: 327 LSKMSLNKDLHFNTSIANLVILRGKDVQSADVEGFKDPALYTSWLKPVNAFNVWKTQRAF 386
S M+++ ++ + Q V+ + + W+ +W
Sbjct: 244 -SSMNIHP------------FMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWD---IL 287
Query: 387 SKYEKSAVLVSNSQFLVKPLDMIVGKAWNMFASKAYIHQYTKFGIEEEDFLDSFTSLEQV 446
K AV + + L M + + KA +H Y G+ E +F ++ ++
Sbjct: 288 PHGHKMAVTFVGNSAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDF 347
Query: 447 VASY 450
++ +
Sbjct: 348 ISEH 351
>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 47.0 bits (110), Expect = 4e-05
Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 44/364 (12%)
Query: 91 HACFCQKQGSGNNWAYGYSVHGPRHEESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGL 150
H+ +G+G+ + + P E IM+ KE E CD GF + S+ GTGSG+
Sbjct: 28 HSMDLPSEGTGDKYVPPTILVDP--EPGIMD--SKEAESCDCLQGFQLTHSLGEGTGSGM 83
Query: 151 GAFVTQNLEDQYSNSLKMNQIIWP----YGTGEVIVQNYNSILTLSHLYRSSDALLLHEN 206
G + + ++ + + + P +GT + + ++ L + L ++D +
Sbjct: 84 GTLLHSKIREEDPDHIMNTSSVMPSLKVFGT---VAEPCSAXLPIHPLVENTDETCGTDI 140
Query: 207 DAIHKICAKLMNIKQISFSDINQVLAHQLGSVFQPTYSAESSFHYRRNPLGDLMEHLVPH 266
+A + I + + + ++ D L H + + + + H + L L + V
Sbjct: 141 EAPYNIRFRTLELTTQNYED----LTHXVSANMRGVTTFLCFPHQLNSDLCKLAVNTVSF 196
Query: 267 PEFKMLSVRNIPHMSENSLAYTTFTWAGLLKHLRQMLISNAKMEEGIDRHVWPPLSGLPP 326
P + P S S Y T + L Q + M PP GLP
Sbjct: 197 PRLQFFMATFAPLTSCGSQLYRALT----MPKLTQQVFDAKNMMAA------PP--GLP- 243
Query: 327 LSKMSLNKDLHFNTSIANLVILRGKDVQSADVEGFKDPALYTSWLKPVNAFNVWKTQRAF 386
S M+++ ++ + Q V+ + + W+ +W
Sbjct: 244 -SSMNIHP------------FMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWD---IL 287
Query: 387 SKYEKSAVLVSNSQFLVKPLDMIVGKAWNMFASKAYIHQYTKFGIEEEDFLDSFTSLEQV 446
K AV + + L M + + KA +H Y G+ E +F ++ ++
Sbjct: 288 PHGHKMAVTFVGNSAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDF 347
Query: 447 VASY 450
++ +
Sbjct: 348 ISEH 351
>gi|39780571 misato [Homo sapiens]
Length = 570
Score = 39.3 bits (90), Expect = 0.007
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 113 PRHEESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNS--LKMNQ 170
P+++E + + + VE+CD GF I+ + G SG+GA + L+D+YS +
Sbjct: 205 PKYQEELEDRLHFYVEECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGL 263
Query: 171 IIWPYGTGEV---IVQNYNSILTLSHL 194
+ PY GE I + N+ L HL
Sbjct: 264 LPGPYHRGEAQRNIYRLLNTAFGLVHL 290
>gi|115334682 SNAP25-interacting protein [Homo sapiens]
Length = 1183
Score = 32.3 bits (72), Expect = 0.91
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 294 GLLKHLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSI 342
GLLK R + + A++ +D VWPP + L S + + FN S+
Sbjct: 810 GLLKRCRGVTDTLAQIRRQVDEGVWPPPNNLLSQSPKKVTAETDFNKSV 858
>gi|50582996 multiple C2 domains, transmembrane 1 isoform S [Homo
sapiens]
Length = 778
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 332 LNKDLHFNTSIANLVILRGKDVQSADVEGFKDPAL--------YTSWLKPVNAFNVWKTQ 383
L++ H I ++ ++ G+D+++ D G DP + Y S + P W+ Q
Sbjct: 240 LHRKSHLWRGIVSITLIEGRDLKAMDSNGLSDPYVKFRLGHQKYKSKIMPKTLNPQWREQ 299
Query: 384 RAFSKYEK 391
F YE+
Sbjct: 300 FDFHLYEE 307
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 332 LNKDLHFNTSIANLVILRGKDVQSADVEGFKDPAL--------YTSWLKPVNAFNVWKTQ 383
L++ H I ++ ++ G+D+++ D G DP + Y S + P W+ Q
Sbjct: 461 LHRKSHLWRGIVSITLIEGRDLKAMDSNGLSDPYVKFRLGHQKYKSKIMPKTLNPQWREQ 520
Query: 384 RAFSKYEK 391
F YE+
Sbjct: 521 FDFHLYEE 528
>gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens]
Length = 83
Score = 30.8 bits (68), Expect = 2.6
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 392 SAVLVSNSQFLVKPLDMIVGKAWNMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
SA +SN+ + + I+G MF K ++ Y G +E +F ++ +S+ +V+ Y
Sbjct: 2 SATFISNNTAIHELFRCILGPFMAMFRCKDFLQWYLGEGKDEIEFTEAESSMNNLVSKY 60
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,697,461
Number of Sequences: 37866
Number of extensions: 711744
Number of successful extensions: 1573
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1465
Number of HSP's gapped (non-prelim): 53
length of query: 453
length of database: 18,247,518
effective HSP length: 106
effective length of query: 347
effective length of database: 14,233,722
effective search space: 4939101534
effective search space used: 4939101534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.