Search of human proteins with 5032247

Search of human proteins with 5032247

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]
         (215 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens]       437   e-123
gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]        437   e-123
gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens]       103   8e-23
gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens]        103   8e-23
gi|4505243 myelin protein zero [Homo sapiens]                         102   3e-22
gi|38093645 myelin protein zero-like 3 [Homo sapiens]                  94   1e-19
gi|4759066 sodium channel, voltage-gated, type II, beta [Homo sa...    92   3e-19
gi|62865876 immunoglobulin superfamily, member 11 isoform b [Hom...    57   1e-08
gi|62865874 immunoglobulin superfamily, member 11 isoform a [Hom...    54   1e-07
gi|9055238 voltage-gated sodium channel beta-3 subunit precursor...    53   2e-07
gi|93587332 voltage-gated sodium channel beta-3 subunit precurso...    53   2e-07
gi|28372555 sodium channel, voltage-gated, type IV, beta isoform...    50   1e-06
gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]     48   5e-06
gi|21361429 V-set and immunoglobulin domain containing 2 [Homo s...    47   9e-06
gi|148664224 adhesion molecule, interacts with CXADR antigen 1 i...    46   3e-05
gi|148664207 adhesion molecule, interacts with CXADR antigen 1 i...    46   3e-05
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s...    45   4e-05
gi|226054871 myelin protein zero-like 1 isoform c [Homo sapiens]       43   2e-04
gi|4503173 coxsackie virus and adenovirus receptor precursor [Ho...    42   3e-04
gi|13489095 sialoadhesin precursor [Homo sapiens]                      41   7e-04
gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]        40   0.001
gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]     39   0.004
gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]     39   0.004
gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]     39   0.004
gi|4506805 sodium channel, voltage-gated, type I, beta isoform a...    38   0.006
gi|5453613 CD7 antigen precursor [Homo sapiens]                        38   0.007
gi|39930610 sodium channel, voltage-gated, type I, beta isoform ...    37   0.017
gi|61966777 V-set and immunoglobulin domain containing 8 [Homo s...    36   0.022
gi|215272334 sodium channel, voltage-gated, type IV, beta isofor...    36   0.028
gi|222136611 poliovirus receptor-related 4 [Homo sapiens]              34   0.082

>gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens]
          Length = 215

 Score =  437 bits (1124), Expect = e-123
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALT 60
           MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALT
Sbjct: 1   MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALT 60

Query: 61  VTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGT 120
           VTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGT
Sbjct: 61  VTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGT 120

Query: 121 YTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVLFQHYRK 180
           YTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVLFQHYRK
Sbjct: 121 YTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVLFQHYRK 180

Query: 181 KRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD 215
           KRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD
Sbjct: 181 KRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD 215


>gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]
          Length = 215

 Score =  437 bits (1124), Expect = e-123
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALT 60
           MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALT
Sbjct: 1   MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALT 60

Query: 61  VTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGT 120
           VTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGT
Sbjct: 61  VTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGT 120

Query: 121 YTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVLFQHYRK 180
           YTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVLFQHYRK
Sbjct: 121 YTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVLFQHYRK 180

Query: 181 KRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD 215
           KRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD
Sbjct: 181 KRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD 215


>gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens]
          Length = 209

 Score =  103 bits (258), Expect = 8e-23
 Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 6/162 (3%)

Query: 24  IAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDP 83
           ++A+E+YT + +   NGT  +L C F S +  G   +V+W+F+P   G +  V ++H   
Sbjct: 35  VSALEVYTPKEIFVANGTQGKLTCKFKSTSTTGGLTSVSWSFQP--EGADTTVSFFHYSQ 92

Query: 84  FQPMSGR---FKDRVSWDGNPERYDASILLWKLQFDDNGTYTCQVKNPPDVDGVIGEIRL 140
            Q   G    FKDR+SW G+ ++ DASI +  +QF  NGTY C VKNPPD+    G IRL
Sbjct: 93  GQVYLGNYPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDVKNPPDIVVQPGHIRL 152

Query: 141 SVVHTVRFSEIH-FLALAIGSACALMIIIVIVVVLFQHYRKK 181
            VV          ++ + I +A  L + ++I ++L   YR+K
Sbjct: 153 YVVEKENLPVFPVWVVVGIVTAVVLGLTLLISMILAVLYRRK 194


>gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens]
          Length = 269

 Score =  103 bits (258), Expect = 8e-23
 Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 6/162 (3%)

Query: 24  IAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDP 83
           ++A+E+YT + +   NGT  +L C F S +  G   +V+W+F+P   G +  V ++H   
Sbjct: 35  VSALEVYTPKEIFVANGTQGKLTCKFKSTSTTGGLTSVSWSFQP--EGADTTVSFFHYSQ 92

Query: 84  FQPMSGR---FKDRVSWDGNPERYDASILLWKLQFDDNGTYTCQVKNPPDVDGVIGEIRL 140
            Q   G    FKDR+SW G+ ++ DASI +  +QF  NGTY C VKNPPD+    G IRL
Sbjct: 93  GQVYLGNYPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDVKNPPDIVVQPGHIRL 152

Query: 141 SVVHTVRFSEIH-FLALAIGSACALMIIIVIVVVLFQHYRKK 181
            VV          ++ + I +A  L + ++I ++L   YR+K
Sbjct: 153 YVVEKENLPVFPVWVVVGIVTAVVLGLTLLISMILAVLYRRK 194


>gi|4505243 myelin protein zero [Homo sapiens]
          Length = 258

 Score =  102 bits (253), Expect = 3e-22
 Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 1/181 (0%)

Query: 5   SSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALTVTWN 64
           SS   +L +L      L P  A+ +YT R +    G+   L C+F S   V D ++ TW 
Sbjct: 18  SSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHCSFWSSEWVSDDISFTWR 77

Query: 65  FRPLDGGPEQFVFYYHI-DPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGTYTC 123
           ++P  G     +F+Y    P+    G FK+R+ W G+P   D SI++  L + DNGT+TC
Sbjct: 78  YQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIVIHNLDYSDNGTFTC 137

Query: 124 QVKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVLFQHYRKKRW 183
            VKNPPD+ G   ++ L V   V       L   IG    ++++++++  + ++   +R 
Sbjct: 138 DVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVLLLLLLFYVVRYCWLRRQ 197

Query: 184 A 184
           A
Sbjct: 198 A 198


>gi|38093645 myelin protein zero-like 3 [Homo sapiens]
          Length = 235

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 4/201 (1%)

Query: 9   AVLLLLGIQL-TALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALTVTWNFRP 67
           A+  LLG+     ++ + ++EI     +    G   +LKCTF S + V D LT+ W +RP
Sbjct: 13  ALFPLLGVLFFQGVYIVFSLEIRADAHVRGYVGEKIKLKCTFKSTSDVTDKLTIDWTYRP 72

Query: 68  LDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGTYTCQVKN 127
                   +F+Y    +   +G F+DR+SW GN  + DASI +      DNGT++C VKN
Sbjct: 73  PSSSHTVSIFHYQSFQYPTTAGTFRDRISWVGNVYKGDASISISNPTIKDNGTFSCAVKN 132

Query: 128 PPDVDGVIGEIRLSVVHT---VRFSEIHFLALAIGSACALMIIIVIVVVLFQHYRKKRWA 184
           PPDV   I    L+V         S +  L++ +    A+++ +++V +  +    K+ +
Sbjct: 133 PPDVHHNIPMTELTVTERGFGTMLSSVALLSILVFVPSAVVVALLLVRMGRKAAGLKKRS 192

Query: 185 ERAHKVVEIKSKEEERLNQEK 205
              +K   I+  ++    +E+
Sbjct: 193 RSGYKKSSIEVSDDTDQEEEE 213


>gi|4759066 sodium channel, voltage-gated, type II, beta [Homo
           sapiens]
          Length = 215

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 56/201 (27%), Positives = 104/201 (51%), Gaps = 6/201 (2%)

Query: 8   RAVLLLLGIQL--TALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDA-LTVTWN 64
           R    L G+ L  + + P  ++E+     L  +NG+DARL CTF+S   V     ++ W 
Sbjct: 9   RPAFSLTGLSLFFSLVPPGRSMEVTVPATLNVLNGSDARLPCTFNSCYTVNHKQFSLNWT 68

Query: 65  FRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGTYTCQ 124
           ++  +   E+    + +        RF+DRV + GNP +YD S++L  +Q +D G Y C 
Sbjct: 69  YQECNNCSEEMFLQFRMKIINLKLERFQDRVEFSGNPSKYDVSVMLRNVQPEDEGIYNCY 128

Query: 125 VKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIG-SACALMIIIVIVVVLFQHYRKKRW 183
           + NPPD     G+I L V+          +A+ +G S    + ++++V+++ +  R+K+ 
Sbjct: 129 IMNPPDRHRGHGKIHLQVLMEEPPERDSTVAVIVGASVGGFLAVVILVLMVVKCVRRKK- 187

Query: 184 AERAHKVVEIKSKEEERLNQE 204
            E+     ++K++EE + + E
Sbjct: 188 -EQKLSTDDLKTEEEGKTDGE 207


>gi|62865876 immunoglobulin superfamily, member 11 isoform b [Homo
           sapiens]
          Length = 431

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 9/136 (6%)

Query: 1   MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSR-VLEAVNGTDARLKCTFSSFAPVGDAL 59
           M  + S  A LLLL +   A    A++E+  S   ++   G  A L CTF++ A + + L
Sbjct: 1   MTSQRSPLAPLLLLSLHGVA----ASLEVSESPGSIQVARGQPAVLPCTFTTSAALIN-L 55

Query: 60  TVTWNFRPLDGG--PEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDD 117
            V W   PL     PEQ + Y     F   + RF  RV + G     + SI +   Q  D
Sbjct: 56  NVIWMVTPLSNANQPEQVILYQGGQMFDG-APRFHGRVGFTGTMPATNVSIFINNTQLSD 114

Query: 118 NGTYTCQVKNPPDVDG 133
            GTY C V N PD+ G
Sbjct: 115 TGTYQCLVNNLPDIGG 130


>gi|62865874 immunoglobulin superfamily, member 11 isoform a [Homo
           sapiens]
          Length = 430

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 35  LEAVNGTDARLKCTFSSFAPVGDALTVTWNFRPLDGG--PEQFVFYYHIDPFQPMSGRFK 92
           ++   G  A L CTF++ A + + L V W   PL     PEQ + Y     F   + RF 
Sbjct: 31  IQVARGQPAVLPCTFTTSAALIN-LNVIWMVTPLSNANQPEQVILYQGGQMFDG-APRFH 88

Query: 93  DRVSWDGNPERYDASILLWKLQFDDNGTYTCQVKNPPDVDG 133
            RV + G     + SI +   Q  D GTY C V N PD+ G
Sbjct: 89  GRVGFTGTMPATNVSIFINNTQLSDTGTYQCLVNNLPDIGG 129


>gi|9055238 voltage-gated sodium channel beta-3 subunit precursor
           [Homo sapiens]
          Length = 215

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 36  EAVNGTDARLKCTFSSFAPVGDALTVT-WNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDR 94
           EAV G   +L+C         +A TV  W +RP +GG + F+ Y + +  Q +   F+ R
Sbjct: 34  EAVQGNPMKLRCISCMKREEVEATTVVEWFYRP-EGGKD-FLIYEYRNGHQEVESPFQGR 91

Query: 95  VSWDGNPERYDASILLWKLQFDDNGTYTCQV 125
           + W+G+ +  D SI +  +  +D+G YTC V
Sbjct: 92  LQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122


>gi|93587332 voltage-gated sodium channel beta-3 subunit precursor
           [Homo sapiens]
          Length = 215

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 36  EAVNGTDARLKCTFSSFAPVGDALTVT-WNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDR 94
           EAV G   +L+C         +A TV  W +RP +GG + F+ Y + +  Q +   F+ R
Sbjct: 34  EAVQGNPMKLRCISCMKREEVEATTVVEWFYRP-EGGKD-FLIYEYRNGHQEVESPFQGR 91

Query: 95  VSWDGNPERYDASILLWKLQFDDNGTYTCQV 125
           + W+G+ +  D SI +  +  +D+G YTC V
Sbjct: 92  LQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122


>gi|28372555 sodium channel, voltage-gated, type IV, beta isoform 1
           precursor [Homo sapiens]
          Length = 228

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 14/179 (7%)

Query: 13  LLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALTVTWNFRPLDGGP 72
           LLG+ L  +     V +  +  + AVNGT+  L CTFSS     D L   W +   D   
Sbjct: 19  LLGLFLLPVTLSLEVSVGKATDIYAVNGTEILLPCTFSSCFGFED-LHFRWTYNSSDAFK 77

Query: 73  ---EQFVFYYHIDPFQPMSGRFKDRVSWDGNPERY--DASILLWKLQFDDNGTYTCQVKN 127
              E  V     DP   ++ +  DR++  G+ +    + SI+L  L+F D G YTC VKN
Sbjct: 78  ILIEGTVKNEKSDP--KVTLKDDDRITLVGSTKEKMNNISIVLRDLEFSDTGKYTCHVKN 135

Query: 128 PPDVDGVIGEIRLSVVHTVRFSEIH-----FLALAIGSACALMIIIVIVVVLFQHYRKK 181
           P + + +     + +    R  E+       +   +G    L+I+I+++  L     KK
Sbjct: 136 PKE-NNLQHHATIFLQVVDRLEEVDNTVTLIILAVVGGVIGLLILILLIKKLIIFILKK 193


>gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]
          Length = 319

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 10/129 (7%)

Query: 13  LLGIQLTALWPIAAVEIYTSR--------VLEAVNGTDARLKCTFSSFAPVGDALTVTWN 64
           ++G     LW + AV +            VL A  G    L CT+ +     + L + W+
Sbjct: 1   MVGKMWPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGL-IQWD 59

Query: 65  FRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGTYTCQ 124
            + L    E+ V +   +        +K+RVS   N E+ DASI + +L   DNGTY C 
Sbjct: 60  -KLLLTHTERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECS 118

Query: 125 VKNPPDVDG 133
           V    D++G
Sbjct: 119 VSLMSDLEG 127


>gi|21361429 V-set and immunoglobulin domain containing 2 [Homo
           sapiens]
          Length = 327

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 5/107 (4%)

Query: 40  GTDARLKCTFSSFAPVGDALTVTWNF-RPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWD 98
           G  A L CT+S+   VGD+  + W+F +P     E     Y  +     +G    RVS  
Sbjct: 38  GKTAELTCTYST--SVGDSFALEWSFVQPGKPISESHPILYFTNGHLYPTGSKSKRVSLL 95

Query: 99  GNPERYD-ASILLWKLQFDDNGTYTCQVKNPPD-VDGVIGEIRLSVV 143
            NP     A++ L  +   D GTY CQV NPPD     +G I L+V+
Sbjct: 96  QNPPTVGVATLKLTDVHPSDTGTYLCQVNNPPDFYTNGLGLINLTVL 142


>gi|148664224 adhesion molecule, interacts with CXADR antigen 1
           isoform 2 [Homo sapiens]
          Length = 384

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 40  GTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDG 99
           G  A + C F S         + W   P +   +++V YY+ +   P+ GRF++RV   G
Sbjct: 25  GDSALMGCVFQSTEDKC-IFKIDWTLSPGEHAKDEYVLYYYSNLSVPI-GRFQNRVHLMG 82

Query: 100 NPERYDASILLWKLQFDDNGTYTCQVK 126
           +    D S+LL  +Q  D GTY C+++
Sbjct: 83  DILCNDGSLLLQDVQEADQGTYICEIR 109



 Score = 36.6 bits (83), Expect = 0.017
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 44  RLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYH----IDPFQPMSGRFKDRVSWDG 99
           ++ C F S   V     V W F       E    YYH       +    G F++RV+  G
Sbjct: 142 QMGCVFQS-TEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVG 200

Query: 100 NPERYDASILLWKLQFDDNGTYTCQV 125
           +  R D SI+L  ++  D G YTC +
Sbjct: 201 DIFRNDGSIMLQGVRESDGGNYTCSI 226


>gi|148664207 adhesion molecule, interacts with CXADR antigen 1
           isoform 1 [Homo sapiens]
          Length = 394

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 40  GTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDG 99
           G  A + C F S         + W   P +   +++V YY+ +   P+ GRF++RV   G
Sbjct: 35  GDSALMGCVFQSTEDKC-IFKIDWTLSPGEHAKDEYVLYYYSNLSVPI-GRFQNRVHLMG 92

Query: 100 NPERYDASILLWKLQFDDNGTYTCQVK 126
           +    D S+LL  +Q  D GTY C+++
Sbjct: 93  DILCNDGSLLLQDVQEADQGTYICEIR 119



 Score = 36.6 bits (83), Expect = 0.017
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 44  RLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYH----IDPFQPMSGRFKDRVSWDG 99
           ++ C F S   V     V W F       E    YYH       +    G F++RV+  G
Sbjct: 152 QMGCVFQS-TEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVG 210

Query: 100 NPERYDASILLWKLQFDDNGTYTCQV 125
           +  R D SI+L  ++  D G YTC +
Sbjct: 211 DIFRNDGSIMLQGVRESDGGNYTCSI 236


>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
           sapiens]
          Length = 387

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 27/106 (25%)

Query: 40  GTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMS----------- 88
           G++  L C +++     + L++ W+F             +H    +P+S           
Sbjct: 36  GSNVTLICIYTTTVASREQLSIQWSF-------------FHKKEMEPISIYFSQGGQAVA 82

Query: 89  -GRFKDRVSWDGNPERYDASILLWKLQFDDNGTYTCQVKNPPDVDG 133
            G+FKDR++   +P   +ASI +  +Q  D+G Y C V NPPD  G
Sbjct: 83  IGQFKDRITGSNDPG--NASITISHMQPADSGIYICDVNNPPDFLG 126


>gi|226054871 myelin protein zero-like 1 isoform c [Homo sapiens]
          Length = 119

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 16/44 (36%), Positives = 28/44 (63%)

Query: 24 IAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALTVTWNFRP 67
          ++A+E+YT + +   NGT  +L C F S +  G   +V+W+F+P
Sbjct: 35 VSALEVYTPKEIFVANGTQGKLTCKFKSTSTTGGLTSVSWSFQP 78


>gi|4503173 coxsackie virus and adenovirus receptor precursor [Homo
           sapiens]
          Length = 365

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 3/101 (2%)

Query: 34  VLEAVNGTDARLKCTFSSFAPVGDALTVTWNFRPLDGGP-EQFVFYYHIDP-FQPMSGRF 91
           ++E   G  A L C F+        L + W   P D    +Q +  Y  D  +       
Sbjct: 28  MIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDL 87

Query: 92  KDRVSWDGNPERY-DASILLWKLQFDDNGTYTCQVKNPPDV 131
           K RV +  N  +  DASI +  LQ  D GTY C+VK  P V
Sbjct: 88  KGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGV 128


>gi|13489095 sialoadhesin precursor [Homo sapiens]
          Length = 1709

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 35  LEAVNGTDARLKCTFSSFAPVG--DALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFK 92
           ++ V G+   + C FS  A V   D +T  W +   D   ++ V  +  DP + +  RF+
Sbjct: 29  VQGVKGSCLLIPCIFSFPADVEVPDGITAIWYY---DYSGQRQVVSHSADP-KLVEARFR 84

Query: 93  DRVSWDGNPERYDASILLWKLQFDDNGTYT-----CQVKNPPDVDGVI 135
            R  + GNPE    ++LL  LQ +D+G+Y       +V    DV G +
Sbjct: 85  GRTEFMGNPEHRVCNLLLKDLQPEDSGSYNFRFEISEVNRWSDVKGTL 132


>gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]
          Length = 373

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 24/83 (28%), Positives = 37/83 (44%)

Query: 45  LKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERY 104
           L C      P  D L + W     +G  +  + Y     +  ++   K RV++  N    
Sbjct: 33  LPCHHQLGLPEKDTLDIEWLLTDNEGNQKVVITYSSRHVYNNLTEEQKGRVAFASNFLAG 92

Query: 105 DASILLWKLQFDDNGTYTCQVKN 127
           DAS+ +  L+  D G YTC+VKN
Sbjct: 93  DASLQIEPLKPSDEGRYTCKVKN 115


>gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]
          Length = 352

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 40  GTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDG 99
           GTD  L C+F++  P      VTW  +    G +Q V  Y+      +   +++RV +  
Sbjct: 44  GTDVVLHCSFANPLPSVKITQVTW--QKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFL- 100

Query: 100 NPERYDASILLWKLQFDDNGTYTCQVKNPP 129
            P   D +I L +L+ +D G Y C+    P
Sbjct: 101 RPSFTDGTIRLSRLELEDEGVYICEFATFP 130


>gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]
          Length = 458

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 40  GTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDG 99
           GTD  L C+F++  P      VTW  +    G +Q V  Y+      +   +++RV +  
Sbjct: 44  GTDVVLHCSFANPLPSVKITQVTW--QKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFL- 100

Query: 100 NPERYDASILLWKLQFDDNGTYTCQVKNPP 129
            P   D +I L +L+ +D G Y C+    P
Sbjct: 101 RPSFTDGTIRLSRLELEDEGVYICEFATFP 130


>gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]
          Length = 517

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 40  GTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDG 99
           GTD  L C+F++  P      VTW  +    G +Q V  Y+      +   +++RV +  
Sbjct: 44  GTDVVLHCSFANPLPSVKITQVTW--QKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFL- 100

Query: 100 NPERYDASILLWKLQFDDNGTYTCQVKNPP 129
            P   D +I L +L+ +D G Y C+    P
Sbjct: 101 RPSFTDGTIRLSRLELEDEGVYICEFATFP 130


>gi|4506805 sodium channel, voltage-gated, type I, beta isoform a
           [Homo sapiens]
          Length = 218

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 23/211 (10%)

Query: 8   RAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALTVT-WNFR 66
           R + L++G  L +      VE+ +    EAV G   ++ C         +A T T W FR
Sbjct: 3   RLLALVVGAALVSSACGGCVEVDSET--EAVYGMTFKILCISCKRRSETNAETFTEWTFR 60

Query: 67  PLDGGPEQFV--FYYHIDPFQ-PMSGRFKDRVSWDGN---PERYDASILLWKLQFDDNGT 120
               G E+FV    Y  +  Q     RF+ RV W+G+    +  D SI +  + ++ +G 
Sbjct: 61  --QKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNVTYNHSGD 118

Query: 121 YTCQV------KNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVL 174
           Y C V      +N      V+ +I + VV          ++  +     +++ I +V  +
Sbjct: 119 YECHVYRLLFFENYEHNTSVVKKIHIEVVDKANRDMASIVSEIMMYVLIVVLTIWLVAEM 178

Query: 175 FQHYRKKRWA------ERAHKVVEIKSKEEE 199
              Y+K   A      E A + + I S+ +E
Sbjct: 179 IYCYKKIAAATETAAQENASEYLAITSESKE 209


>gi|5453613 CD7 antigen precursor [Homo sapiens]
          Length = 240

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 71  GPE-QFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGTYTCQVKNPP 129
           GP+ Q + YY          RF+ R+ + G+ +  + +I + +LQ  D GTYTCQ     
Sbjct: 63  GPQPQDIIYYEDGVVPTTDRRFRGRIDFSGSQD--NLTITMHRLQLSDTGTYTCQAITEV 120

Query: 130 DVDG 133
           +V G
Sbjct: 121 NVYG 124


>gi|39930610 sodium channel, voltage-gated, type I, beta isoform b
           [Homo sapiens]
          Length = 268

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 37/192 (19%)

Query: 8   RAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALTVT-WNFR 66
           R + L++G  L +      VE+ +    EAV G   ++ C         +A T T W FR
Sbjct: 3   RLLALVVGAALVSSACGGCVEVDSET--EAVYGMTFKILCISCKRRSETNAETFTEWTFR 60

Query: 67  PLDGGPEQFV--FYYHIDPFQ-PMSGRFKDRVSWDGN---PERYDASILLWKLQFDDNGT 120
               G E+FV    Y  +  Q     RF+ RV W+G+    +  D SI +  + ++ +G 
Sbjct: 61  --QKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNVTYNHSGD 118

Query: 121 YTCQV------KNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVL 174
           Y C V      +N      V+ +I + VV               G+AC   +        
Sbjct: 119 YECHVYRLLFFENYEHNTSVVKKIHIEVVDKGE----------SGAACPFTVT------- 161

Query: 175 FQHYRKKRWAER 186
              +R+ RW +R
Sbjct: 162 ---HRRARWRDR 170


>gi|61966777 V-set and immunoglobulin domain containing 8 [Homo
           sapiens]
          Length = 414

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 10/101 (9%)

Query: 34  VLEAVNGTDARLKCTF----SSFAPVGDALTVTW---NFRPLDGGPEQFVFYYHIDPFQP 86
           VL    G + RL C +      + P G  L + W   N  P       F+ Y        
Sbjct: 31  VLYLAEGDNVRLGCPYVLDPEDYGPNG--LDIEWMQVNSDPAHHRENVFLSYQDKRINHG 88

Query: 87  MSGRFKDRVSWDGN-PERYDASILLWKLQFDDNGTYTCQVK 126
                + RV +  + P +YDASI L  LQ  D  TY C+VK
Sbjct: 89  SLPHLQQRVRFAASDPSQYDASINLMNLQVSDTATYECRVK 129


>gi|215272334 sodium channel, voltage-gated, type IV, beta isoform 3
           [Homo sapiens]
          Length = 118

 Score = 35.8 bits (81), Expect = 0.028
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%)

Query: 107 SILLWKLQFDDNGTYTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIH-----FLALAIGSA 161
           SI+L  L+F D G YTC VKNP + + +     + +    R  E+       +   +G  
Sbjct: 5   SIVLRDLEFSDTGKYTCHVKNPKE-NNLQHHATIFLQVVDRLEEVDNTVTLIILAVVGGV 63

Query: 162 CALMIIIVIVVVLFQHYRKK 181
             L+I+I+++  L     KK
Sbjct: 64  IGLLILILLIKKLIIFILKK 83


>gi|222136611 poliovirus receptor-related 4 [Homo sapiens]
          Length = 510

 Score = 34.3 bits (77), Expect = 0.082
 Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 20/137 (14%)

Query: 1   MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKCTF--SSFAPVGDA 58
           M+G  +   +LLLL    T   P  A E+ TS V+  V G DA+L C +   S   VG  
Sbjct: 9   MWGPEAWLLLLLLLA-SFTGRCP--AGELETSDVVTVVLGQDAKLPCFYRGDSGEQVGQ- 64

Query: 59  LTVTWNFRPLDGGPEQFVFYY-----HIDPFQPMSGRFKDRVSWDGNPER-YDASILLWK 112
             V W       G ++    +     H+ P       ++ RV     P    D S+LL  
Sbjct: 65  --VAWARVDAGEGAQELALLHSKYGLHVSP------AYEGRVEQPPPPRNPLDGSVLLRN 116

Query: 113 LQFDDNGTYTCQVKNPP 129
               D G Y C+V   P
Sbjct: 117 AVQADEGEYECRVSTFP 133


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,158,918
Number of Sequences: 37866
Number of extensions: 355649
Number of successful extensions: 1635
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1464
Number of HSP's gapped (non-prelim): 209
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.