Guide to the Human Genome
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Search of human proteins with 5031873

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5031873 lectin, mannose-binding, 1 precursor [Homo sapiens]
         (510 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5031873 lectin, mannose-binding, 1 precursor [Homo sapiens]       1043   0.0  
gi|75677363 lectin, mannose-binding, 1 like [Homo sapiens]            276   3e-74
gi|5803023 lectin, mannose-binding 2 precursor [Homo sapiens]         160   3e-39
gi|13540594 lectin, mannose-binding 2-like isoform 2 [Homo sapiens]   154   2e-37
gi|214010240 lectin, mannose-binding 2-like isoform 1 [Homo sapi...   150   3e-36
gi|4758650 kinesin family member 5C [Homo sapiens]                     45   2e-04
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         42   0.001
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         42   0.001
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ...    41   0.002
gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]    40   0.004
gi|4506467 radixin [Homo sapiens]                                      40   0.005
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]             39   0.009
gi|21735548 centrosomal protein 2 [Homo sapiens]                       39   0.011
gi|4505257 moesin [Homo sapiens]                                       39   0.011
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi...    38   0.019
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap...    38   0.019
gi|115529449 upstream binding transcription factor, RNA polymera...    38   0.019
gi|115529451 upstream binding transcription factor, RNA polymera...    38   0.019
gi|7657671 upstream binding transcription factor, RNA polymerase...    38   0.019
gi|110347568 centrosomal protein 152kDa [Homo sapiens]                 38   0.019
gi|122937396 coiled-coil domain containing 150 [Homo sapiens]          38   0.019
gi|87298937 centrosomal protein 110kDa [Homo sapiens]                  38   0.019
gi|45446749 kinesin family member 5A [Homo sapiens]                    38   0.025
gi|149363664 septin 8 isoform d [Homo sapiens]                         38   0.025
gi|149363689 septin 8 isoform a [Homo sapiens]                         38   0.025
gi|149363661 septin 8 isoform b [Homo sapiens]                         38   0.025
gi|157042792 coiled-coil domain containing 64B [Homo sapiens]          38   0.025
gi|239741668 PREDICTED: upstream binding transcription factor, R...    37   0.033
gi|169163306 PREDICTED: upstream binding transcription factor, R...    37   0.033
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi...    37   0.033

>gi|5031873 lectin, mannose-binding, 1 precursor [Homo sapiens]
          Length = 510

 Score = 1043 bits (2696), Expect = 0.0
 Identities = 510/510 (100%), Positives = 510/510 (100%)

Query: 1   MAGSRQRGLRARVRPLFCALLLSLGRFVRGDGVGGDPAVALPHRRFEYKYSFKGPHLVQS 60
           MAGSRQRGLRARVRPLFCALLLSLGRFVRGDGVGGDPAVALPHRRFEYKYSFKGPHLVQS
Sbjct: 1   MAGSRQRGLRARVRPLFCALLLSLGRFVRGDGVGGDPAVALPHRRFEYKYSFKGPHLVQS 60

Query: 61  DGTVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGA 120
           DGTVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGA
Sbjct: 61  DGTVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGA 120

Query: 121 DGLAIWYAENQGLEGPVFGSADLWNGVGIFFDSFDNDGKKNNPAIVIIGNNGQIHYDHQN 180
           DGLAIWYAENQGLEGPVFGSADLWNGVGIFFDSFDNDGKKNNPAIVIIGNNGQIHYDHQN
Sbjct: 121 DGLAIWYAENQGLEGPVFGSADLWNGVGIFFDSFDNDGKKNNPAIVIIGNNGQIHYDHQN 180

Query: 181 DGASQALASCQRDFRNKPYPVRAKITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPA 240
           DGASQALASCQRDFRNKPYPVRAKITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPA
Sbjct: 181 DGASQALASCQRDFRNKPYPVRAKITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPA 240

Query: 241 QGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQEL 300
           QGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQEL
Sbjct: 241 QGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQEL 300

Query: 301 DKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQR 360
           DKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQR
Sbjct: 301 DKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQR 360

Query: 361 RYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVRLVSGM 420
           RYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVRLVSGM
Sbjct: 361 RYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVRLVSGM 420

Query: 421 QHPGSAGGVYETTQHFIDIKEHLHIVKRDIDNLVQRNMPSNEKPKCPELPPFPSCLSTVH 480
           QHPGSAGGVYETTQHFIDIKEHLHIVKRDIDNLVQRNMPSNEKPKCPELPPFPSCLSTVH
Sbjct: 421 QHPGSAGGVYETTQHFIDIKEHLHIVKRDIDNLVQRNMPSNEKPKCPELPPFPSCLSTVH 480

Query: 481 FIIFVVVQTVLFIGYIMYRSQQEAAAKKFF 510
           FIIFVVVQTVLFIGYIMYRSQQEAAAKKFF
Sbjct: 481 FIIFVVVQTVLFIGYIMYRSQQEAAAKKFF 510


>gi|75677363 lectin, mannose-binding, 1 like [Homo sapiens]
          Length = 526

 Score =  276 bits (706), Expect = 3e-74
 Identities = 176/503 (34%), Positives = 269/503 (53%), Gaps = 41/503 (8%)

Query: 15  PLFCALLLSLGRFVRGDGVGGDPAVALPHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAI 74
           PLFC LLL L       G         P RRFEYK SFKGP L      +PFW+H G+AI
Sbjct: 9   PLFCLLLLLLDPHSPETGCP-------PLRRFEYKLSFKGPRLALPGAGIPFWSHHGDAI 61

Query: 75  PSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGADGLAIWYAENQGLE 134
              +++R+ PS++++ G+VW++    F  WEVEV  RVTG GR GA G+A+WY   +G  
Sbjct: 62  LGLEEVRLTPSMRNRSGAVWSRASVPFSAWEVEVQMRVTGLGRRGAQGMAVWYTRGRGHV 121

Query: 135 GPVFGSADLWNGVGIFFDSFDNDGKKNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDF 194
           G V G    W+G+GIFFDS   D  +++PAI ++ ++G I  +   DGASQ L SC  DF
Sbjct: 122 GSVLGGLASWDGIGIFFDSPAED-TQDSPAIRVLASDGHIPSEQPGDGASQGLGSCHWDF 180

Query: 195 RNKPYPVRAKITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLA 254
           RN+P+P RA+ITY+   L + +N+G TP  +  EFC  V  +++   G FG+SAATG LA
Sbjct: 181 RNRPHPFRARITYWGQRLRMSLNSGLTP-SDPGEFCVDVGPLLLVPGGFFGVSAATGTLA 239

Query: 255 DDHDVLSFLTFQLTEPGKE-PPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPD 313
           DDHDVLSFLTF L+EP  E PP P  E+ +    + Q E    +  L  +++   K   +
Sbjct: 240 DDHDVLSFLTFSLSEPSPEVPPQPFLEMQQLRLAR-QLEGLWARLGLGTREDVTPKSDSE 298

Query: 314 LQGQPAEEIF---ESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDE--QRRYVSSLTE 368
            QG+  E +F   E++G    R++ +    +  ++ Q  RQ    L    Q R       
Sbjct: 299 AQGE-GERLFDLEETLGRH--RRILQALRGLSKQLAQAERQWKKQLGPPGQARPDGGWAL 355

Query: 369 EISKRGAGMPGQHGQITQQ------ELDTVVKTQHEILRQVNEMKNSMSETVRLVSGMQH 422
           + S +    PG+ G ++        ++  ++  Q  +L+ + EM+++    VR+ +  Q 
Sbjct: 356 DASCQIPSTPGRGGHLSMSLNKDSAKVGALLHGQWTLLQALQEMRDA---AVRMAAEAQV 412

Query: 423 PGSAGGVYETTQHFIDIKEHLHIVKRDIDNLVQRNMPSNEKPKCPELPPFP----SCLST 478
                G+     HF+++   L +++ ++        P+    K P  P  P    SCL  
Sbjct: 413 SYLPVGI---EHHFLELDHILGLLQEELRG------PAKAAAKAPRPPGQPPRASSCLQP 463

Query: 479 VHFIIFVVVQTVLFIGYIMYRSQ 501
             F+ ++++QTV F GY+ +R +
Sbjct: 464 GIFLFYLLIQTVGFFGYVHFRQE 486


>gi|5803023 lectin, mannose-binding 2 precursor [Homo sapiens]
          Length = 356

 Score =  160 bits (405), Expect = 3e-39
 Identities = 91/270 (33%), Positives = 142/270 (52%), Gaps = 20/270 (7%)

Query: 15  PLFCALLLSLGRFVRGDGVGGDPAVALPHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAI 74
           PLF  LLL     V  D   G+          + ++S   P+      ++P W   G+ +
Sbjct: 32  PLFLLLLLGS---VTADITDGNS------EHLKREHSLIKPYQGVGSSSMPLWDFQGSTM 82

Query: 75  PSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGR--IGADGLAIWYAENQG 132
            +S  +R+ P  +S+ GS+W       ++WE+ V F+V G G+  +  DG+A+WY  ++ 
Sbjct: 83  LTSQYVRLTPDERSKEGSIWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRL 142

Query: 133 LEGPVFGSADLWNGVGIFFDSFDNDGKKNN--PAIVIIGNNGQIHYDHQNDGASQALASC 190
           + GPVFGS D ++G+ IF D++ ND       P I ++ NNG + YDH  DG    LA C
Sbjct: 143 VPGPVFGSKDNFHGLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGC 202

Query: 191 QRDFRNKPYPVRAKITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAAT 250
             DFRN+ +     + Y +  LTVM +     DKN+++ C  +  + +P   +FG SA T
Sbjct: 203 TADFRNRDHDTFLAVRYSRGRLTVMTD---LEDKNEWKNCIDITGVRLPTGYYFGASAGT 259

Query: 251 GGLADDHDVLSFLTFQLTEPGKEPPTPDKE 280
           G L+D+HD++S   FQL        TPD+E
Sbjct: 260 GDLSDNHDIISMKLFQL----MVEHTPDEE 285


>gi|13540594 lectin, mannose-binding 2-like isoform 2 [Homo sapiens]
          Length = 348

 Score =  154 bits (389), Expect = 2e-37
 Identities = 90/271 (33%), Positives = 144/271 (53%), Gaps = 18/271 (6%)

Query: 6   QRGLRARVRPLFCALLLSLGRFVRGDGVGGDPAVALPHRRFEY---KYSFKGPHLVQSDG 62
           +R L AR       LLL LG        G  P      + FEY   ++S   P+     G
Sbjct: 15  RRCLSARDGSRMLLLLLLLGS-------GQGPQQVGAGQTFEYLKREHSLSKPYQGVGTG 67

Query: 63  TVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGR--IGA 120
           +   W   GNA+  +  IR+ P ++S++G++W +      +WE++V F++ G+G+  +  
Sbjct: 68  SSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFKIHGQGKKNLHG 127

Query: 121 DGLAIWYAENQGLEGPVFGSADLWNGVGIFFDSFDNDGKKNN---PAIVIIGNNGQIHYD 177
           DGLAIWY +++   GPVFG+ D + G+G+F D++ N+ K+     P I  + NNG + YD
Sbjct: 128 DGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQERVFPYISAMVNNGSLSYD 187

Query: 178 HQNDGASQALASCQRDFRNKPYPVRAKITYYQNTLTVMINNGFTPDKNDYEFCAKVENMI 237
           H+ DG    L  C    RN  Y     I Y +  LT+M++      K+++  C +V  + 
Sbjct: 188 HERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMD---IDGKHEWRDCIEVPGVR 244

Query: 238 IPAQGHFGISAATGGLADDHDVLSFLTFQLT 268
           +P   +FG S+ TG L+D+HDV+S   F+LT
Sbjct: 245 LPRGYYFGTSSITGDLSDNHDVISLKLFELT 275



 Score = 29.6 bits (65), Expect = 6.8
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 7/59 (11%)

Query: 458 MPSNEKPKCPE----LPPFPSCLSTVHFIIFVVVQTV--LFIGYIMYRSQQEAAAKKFF 510
           +PS +  K PE    LPP  S L+    + F +V +V  + IG I+Y   QE + K+F+
Sbjct: 291 LPSVDNMKLPEMTAPLPPL-SGLALFLIVFFSLVFSVFAIVIGIILYNKWQEQSRKRFY 348


>gi|214010240 lectin, mannose-binding 2-like isoform 1 [Homo
           sapiens]
          Length = 359

 Score =  150 bits (378), Expect = 3e-36
 Identities = 90/282 (31%), Positives = 144/282 (51%), Gaps = 29/282 (10%)

Query: 6   QRGLRARVRPLFCALLLSLGRFVRGDGVGGDPAVALPHRRFEY---KYSFKGPHLVQSDG 62
           +R L AR       LLL LG        G  P      + FEY   ++S   P+     G
Sbjct: 15  RRCLSARDGSRMLLLLLLLGS-------GQGPQQVGAGQTFEYLKREHSLSKPYQGVGTG 67

Query: 63  TVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGR--IGA 120
           +   W   GNA+  +  IR+ P ++S++G++W +      +WE++V F++ G+G+  +  
Sbjct: 68  SSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFKIHGQGKKNLHG 127

Query: 121 DGLAIWYAENQGLEGPVFGSADLWNGVGIFFDSFDNDGKKNN--------------PAIV 166
           DGLAIWY +++   GPVFG+ D + G+G+F D++ N+ K+                P I 
Sbjct: 128 DGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQEAQKRRYSPGVQRVFPYIS 187

Query: 167 IIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRAKITYYQNTLTVMINNGFTPDKND 226
            + NNG + YDH+ DG    L  C    RN  Y     I Y +  LT+M++      K++
Sbjct: 188 AMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMD---IDGKHE 244

Query: 227 YEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFLTFQLT 268
           +  C +V  + +P   +FG S+ TG L+D+HDV+S   F+LT
Sbjct: 245 WRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELT 286



 Score = 29.6 bits (65), Expect = 6.8
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 7/59 (11%)

Query: 458 MPSNEKPKCPE----LPPFPSCLSTVHFIIFVVVQTV--LFIGYIMYRSQQEAAAKKFF 510
           +PS +  K PE    LPP  S L+    + F +V +V  + IG I+Y   QE + K+F+
Sbjct: 302 LPSVDNMKLPEMTAPLPPL-SGLALFLIVFFSLVFSVFAIVIGIILYNKWQEQSRKRFY 359


>gi|4758650 kinesin family member 5C [Homo sapiens]
          Length = 957

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 39/221 (17%)

Query: 281 ISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRE--LRQVFEGQ 338
           IS +EKEKY EE     ++LD K +E  +     Q Q AE++ + + D++  L       
Sbjct: 409 ISTEEKEKYDEEISSLYRQLDDKDDEINQ-----QSQLAEKLKQQMLDQDELLASTRRDY 463

Query: 339 NRIHLEIKQLNRQLDMILDEQRRYVSSLTE------EISKRGAGMPGQHGQITQ---QEL 389
            +I  E+ +L  + +   DE +  + +L E      + S+        + Q+T    Q+ 
Sbjct: 464 EKIQEELTRLQIENEAAKDEVKEVLQALEELAVNYDQKSQEVEDKTRANEQLTDELAQKT 523

Query: 390 DTVVKTQHEILRQVNEMKNSMSETVRLVSG--MQHPGSAGGVYETT-------------Q 434
            T+  TQ E L Q+ E+ N   +    +    ++  G  GG+  T              +
Sbjct: 524 TTLTTTQRE-LSQLQELSNHQKKRATEILNLLLKDLGEIGGIIGTNDVKTLADVNGVIEE 582

Query: 435 HFIDIKEHLHIVKRDIDNLVQRN-------MPSNEKPKCPE 468
            F   + ++  +K ++ +LV R+       M SN K    E
Sbjct: 583 EFTMARLYISKMKSEVKSLVNRSKQLESAQMDSNRKMNASE 623


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 4/140 (2%)

Query: 283  EKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVF-EGQNRI 341
            EKE    +E+ E F++EL+ K EE Q+ H  L+ Q  E         +  ++F +   ++
Sbjct: 2202 EKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKL 2261

Query: 342  HLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILR 401
             L IK+ +    M   +Q        + I ++   +   + Q+T+ +    + T ++++ 
Sbjct: 2262 GLAIKESDA---MSTQDQHVLFGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDNKVIE 2318

Query: 402  QVNEMKNSMSETVRLVSGMQ 421
            + NE+   +   +  +   Q
Sbjct: 2319 EKNELIRDLETQIECLMSDQ 2338



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 9/63 (14%)

Query: 290  QEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLN 349
            +E+ E  +QEL ++ +E Q+         A E+      R++ +  E Q ++  EIK+LN
Sbjct: 1584 EEQLEDMRQELVRQYQEHQQ---------ATELLRQAHMRQMERQREDQEQLQEEIKRLN 1634

Query: 350  RQL 352
            RQL
Sbjct: 1635 RQL 1637



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 29/156 (18%), Positives = 69/156 (44%), Gaps = 15/156 (9%)

Query: 252  GLADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGH 311
            G  D   +L+ L  ++ E G E     + + + ++     E +    +++ +K   ++  
Sbjct: 3053 GTTDAVGLLNCLEQRIQEQGVEYQAAMECLQKADRRSLLSEIQALHAQMNGRKITLKREQ 3112

Query: 312  PDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEIS 371
                 +P++E+ E    ++  Q+ E Q  +   +K    +L   L  ++  V+ L  E++
Sbjct: 3113 ES--EKPSQELLEYNIQQKQSQMLEMQVELS-SMKDRATELQEQLSSEKMVVAELKSELA 3169

Query: 372  KRGAGMPGQHGQITQQELDTVVKTQHEILRQVNEMK 407
            +            T+ EL+T +K QH+ L+++   +
Sbjct: 3170 Q------------TKLELETTLKAQHKHLKELEAFR 3193



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 263 LTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEI 322
           +T Q+ E  KE     +E  EKEK   ++E +  Q + +  +++ ++   DLQ + A+  
Sbjct: 717 MTLQINELQKEIEILRQE--EKEKGTLEQEVQELQLKTELLEKQMKEKENDLQEKFAQLE 774

Query: 323 FESVGDRELRQVFEGQNRIHLEIKQLNR 350
            E+   ++ ++  E   +IH  + Q  R
Sbjct: 775 AENSILKDEKKTLEDMLKIHTPVSQEER 802


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 4/140 (2%)

Query: 283  EKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVF-EGQNRI 341
            EKE    +E+ E F++EL+ K EE Q+ H  L+ Q  E         +  ++F +   ++
Sbjct: 2194 EKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKL 2253

Query: 342  HLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILR 401
             L IK+ +    M   +Q        + I ++   +   + Q+T+ +    + T ++++ 
Sbjct: 2254 GLAIKESDA---MSTQDQHVLFGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDNKVIE 2310

Query: 402  QVNEMKNSMSETVRLVSGMQ 421
            + NE+   +   +  +   Q
Sbjct: 2311 EKNELIRDLETQIECLMSDQ 2330



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 9/63 (14%)

Query: 290  QEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLN 349
            +E+ E  +QEL ++ +E Q+         A E+      R++ +  E Q ++  EIK+LN
Sbjct: 1584 EEQLEDMRQELVRQYQEHQQ---------ATELLRQAHMRQMERQREDQEQLQEEIKRLN 1634

Query: 350  RQL 352
            RQL
Sbjct: 1635 RQL 1637



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 29/156 (18%), Positives = 69/156 (44%), Gaps = 15/156 (9%)

Query: 252  GLADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGH 311
            G  D   +L+ L  ++ E G E     + + + ++     E +    +++ +K   ++  
Sbjct: 3045 GTTDAVGLLNCLEQRIQEQGVEYQAAMECLQKADRRSLLSEIQALHAQMNGRKITLKREQ 3104

Query: 312  PDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEIS 371
                 +P++E+ E    ++  Q+ E Q  +   +K    +L   L  ++  V+ L  E++
Sbjct: 3105 ES--EKPSQELLEYNIQQKQSQMLEMQVELS-SMKDRATELQEQLSSEKMVVAELKSELA 3161

Query: 372  KRGAGMPGQHGQITQQELDTVVKTQHEILRQVNEMK 407
            +            T+ EL+T +K QH+ L+++   +
Sbjct: 3162 Q------------TKLELETTLKAQHKHLKELEAFR 3185



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 263 LTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEI 322
           +T Q+ E  KE     +E  EKEK   ++E +  Q + +  +++ ++   DLQ + A+  
Sbjct: 717 MTLQINELQKEIEILRQE--EKEKGTLEQEVQELQLKTELLEKQMKEKENDLQEKFAQLE 774

Query: 323 FESVGDRELRQVFEGQNRIHLEIKQLNR 350
            E+   ++ ++  E   +IH  + Q  R
Sbjct: 775 AENSILKDEKKTLEDMLKIHTPVSQEER 802


>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin
           (with transmembrane signal), 1 [Homo sapiens]
          Length = 3259

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 14/166 (8%)

Query: 253 LADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHP 312
           L +  +++S L  QLT+   E P         +     EEF   +Q+L +K+E       
Sbjct: 153 LQEKEELISTLQAQLTQAQAEQPA--------QSSTEMEEFVMMKQQLQEKEEFISTLQA 204

Query: 313 DLQGQPAEEIFESVGDRELRQVFEGQNRIHL-EIKQLNRQLDMILDEQRRYVSSLTEEIS 371
            L    AE+  + V  RE    FE Q R+H  E+ QL  Q D+  + Q++ +  L  ++ 
Sbjct: 205 QLSQTQAEQAAQQV-VREKDARFETQVRLHEDELLQLVTQADVETEMQQK-LRVLQRKLE 262

Query: 372 KRGAGMPG--QHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVR 415
           +    + G  Q   + QQEL T  + +++IL Q  +   +   T+R
Sbjct: 263 EHEESLVGRAQVVDLLQQEL-TAAEQRNQILSQQLQQMEAEHNTLR 307



 Score = 29.3 bits (64), Expect = 8.9
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 19/137 (13%)

Query: 279  KEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAE-EIFESVGDRELRQVFEG 337
            KEI E EK + + +      EL KK EE  +    +  Q  E E  ++V      +V   
Sbjct: 1312 KEI-EAEKVELELKVSSTTSELTKKSEEVFQLQEQINKQGLEIESLKTVSHEA--EVHAE 1368

Query: 338  QNRIHLEIKQLN-------RQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELD 390
              +  LE  QL        R+L   LDE ++ +S   E++S          GQ++++E  
Sbjct: 1369 SLQQKLESSQLQIAGLEHLRELQPKLDELQKLISKKEEDVSYLS-------GQLSEKEA- 1420

Query: 391  TVVKTQHEILRQVNEMK 407
             + K Q EI+ Q + +K
Sbjct: 1421 ALTKIQTEIIEQEDLIK 1437


>gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]
          Length = 1498

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 28/123 (22%), Positives = 62/123 (50%), Gaps = 8/123 (6%)

Query: 288  KYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQ 347
            K+ +E   FQ EL + + + Q     L  Q +++    VG++E+  +    ++   EI+ 
Sbjct: 1246 KHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQ---PVGNQEMENLKWEVDQKEREIQS 1302

Query: 348  LNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNEMK 407
            L +QLD+   + R+ +  L + +    + +     ++ Q++L    K +  +  +V+E+K
Sbjct: 1303 LKQQLDLTEQQGRKELEGLQQLLQNVKSEL-----EMAQEDLSMTQKDKFMLQAKVSELK 1357

Query: 408  NSM 410
            N+M
Sbjct: 1358 NNM 1360



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 269 EPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQK-GHPDLQGQPAEEIFE--- 324
           E G E  +   E   +E      + EH QQE    K++ QK     LQ +   E +    
Sbjct: 800 EEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQKVMVEAYRRDA 859

Query: 325 SVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTE------EISKRGAGMP 378
           +  D+ + ++   + R+  E+K+L ++L  +  E+R   + L+       ++ +  A + 
Sbjct: 860 TSKDQLISELKATRKRLDSELKELRQELMQVHGEKRTAEAELSRLHREVAQVRQHMADLE 919

Query: 379 GQHGQITQQELD 390
           G H Q  Q+E D
Sbjct: 920 G-HLQSAQKERD 930



 Score = 29.3 bits (64), Expect = 8.9
 Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 23/162 (14%)

Query: 297 QQELDKKKEEFQKGHPD----LQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQL 352
           ++ELD+     ++G  +    L+    E   +S     L+Q      +   +IK+   Q 
Sbjct: 789 KEELDRGARRLEEGTEETSETLEKLREELAIKSGQVEHLQQETAALKKQMQKIKEQFLQQ 848

Query: 353 DMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVN-EMKNSMS 411
            ++++  RR  +S  + IS+  A         T++ LD+ +K   + L QV+ E + + +
Sbjct: 849 KVMVEAYRRDATSKDQLISELKA---------TRKRLDSELKELRQELMQVHGEKRTAEA 899

Query: 412 ETVRLVSGMQHPGSAGGVYETTQHFIDIKEHLHIVKRDIDNL 453
           E  RL            V +  QH  D++ HL   +++ D +
Sbjct: 900 ELSRLHRE---------VAQVRQHMADLEGHLQSAQKERDEM 932


>gi|4506467 radixin [Homo sapiens]
          Length = 583

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 7/124 (5%)

Query: 282 SEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRI 341
           ++  +EK+Q++ E  Q E +KKK E  +   +   +  EE+ E      L+Q+ E   + 
Sbjct: 307 AQAREEKHQKQLERAQLENEKKKREIAEKEKERIEREKEELME-----RLKQIEEQTIKA 361

Query: 342 HLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILR 401
             E+++  R+  + LD++R+      E + K           I +Q  D  +K Q ++  
Sbjct: 362 QKELEEQTRKA-LELDQERKRAKEEAERLEKERRAAEEAKSAIAKQAADQ-MKNQEQLAA 419

Query: 402 QVNE 405
           ++ E
Sbjct: 420 ELAE 423



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 266 QLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFES 325
           QL     E     +EI+EKEKE+ + E E   + L + +E+  K   +L+ Q  + +   
Sbjct: 317 QLERAQLENEKKKREIAEKEKERIEREKEELMERLKQIEEQTIKAQKELEEQTRKAL--- 373

Query: 326 VGDRELRQVFEGQNRIHLE 344
             D+E ++  E   R+  E
Sbjct: 374 ELDQERKRAKEEAERLEKE 392


>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1411

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 50/242 (20%), Positives = 98/242 (40%), Gaps = 18/242 (7%)

Query: 246 ISAATGGLADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKE 305
           +  A   L D    L+ +T QL +   +    DK+    + E + +E++     L++K E
Sbjct: 669 LDTAQNALQDKQQELNKITTQLDQVTAK--LQDKQEHCSQLESHLKEYKEKYLSLEQKTE 726

Query: 306 EFQKGHPDLQGQPAE-EIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVS 364
           E +     L+    E +  +    ++L+Q  +    + L   +L++QL+M    ++  VS
Sbjct: 727 ELEGQIKKLEADSLEVKASKEQALQDLQQQRQLNTDLELRATELSKQLEM----EKEIVS 782

Query: 365 SLTEEISKRGAGMPGQHGQITQQELD-TVVKTQHEILRQV-----NEMKNSMSETVRLVS 418
           S   ++ K+   +     ++T+QE +  ++K   E L Q       E+ N +  TV  + 
Sbjct: 783 STRLDLQKKSEALESIKQKLTKQEEEKQILKQDFETLSQETKIQHEELNNRIQTTVTELQ 842

Query: 419 GMQHPGSAGGVYETTQHFIDIKEHLHIVKRDIDNLVQRNMPSNEKPKCPELPPFPSCLST 478
            ++    A            +K+ L  V   + N        N+K K   L    +C   
Sbjct: 843 KVKMEKEA-----LMTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKEL 897

Query: 479 VH 480
            H
Sbjct: 898 KH 899


>gi|21735548 centrosomal protein 2 [Homo sapiens]
          Length = 2442

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 34/164 (20%), Positives = 76/164 (46%), Gaps = 20/164 (12%)

Query: 257  HDVLSFLTF---QLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPD 313
            HD+ S  T    +L E  +E  +  ++I E +++K     EH  Q+L+++ +E       
Sbjct: 1612 HDLESHSTVLARELQERDQEVKSQREQIEELQRQK-----EHLTQDLERRDQELMLQKER 1666

Query: 314  LQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKR 373
            +Q      + E    R+ + + E   +I L +++  R+    L  QR+ +    EE    
Sbjct: 1667 IQ------VLEDQRTRQTKILEEDLEQIKLSLRERGRE----LTTQRQLMQERAEEGKGP 1716

Query: 374  GAGMPG--QHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVR 415
                 G  +H ++  ++ +  V+ Q E + ++ E+K+ + + ++
Sbjct: 1717 SKAQRGSLEHMKLILRDKEKEVECQQEHIHELQELKDQLEQQLQ 1760



 Score = 37.7 bits (86), Expect = 0.025
 Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 15/131 (11%)

Query: 284 KEKEKYQEEFEHFQQELDKKKEE---FQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNR 340
           KE+E  Q+  E  +Q+L+  ++E    ++ + +LQ Q         GD    Q  E Q  
Sbjct: 463 KERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQ---------GDSAQGQKEEQQEE 513

Query: 341 IHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQH--GQITQQELDTVVKTQHE 398
           +HL +++  R  +M++  + +   SL+E I+ R A +   H  G++ +QE   V      
Sbjct: 514 LHLAVRERERLQEMLMGLEAKQSESLSELITLREA-LESSHLEGELLRQEQTEVTAALAR 572

Query: 399 ILRQVNEMKNS 409
             + + E+ +S
Sbjct: 573 AEQSIAELSSS 583



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 22/145 (15%)

Query: 283  EKEKEKYQEEFEHFQQELDKKKE--EFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNR 340
            EK++E  +   EH   EL+KK +  E Q+G         +++ + +   E   +   +N 
Sbjct: 1514 EKDRETQRNVLEHQLLELEKKDQMIESQRGQ-------VQDLKKQLVTLECLALELEENH 1566

Query: 341  IHLEIKQ-LNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQ------------Q 387
              +E +Q L ++L+   + QR  ++ LT ++ +R   +  Q  QI              Q
Sbjct: 1567 HKMECQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQ 1626

Query: 388  ELDTVVKTQHEILRQVNEMKNSMSE 412
            E D  VK+Q E + ++   K  +++
Sbjct: 1627 ERDQEVKSQREQIEELQRQKEHLTQ 1651



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 13/153 (8%)

Query: 278  DKEISEKEKEKYQEEFEHFQQELDKKKEE-----FQKGHPDLQGQPAEEIFESVGDRELR 332
            ++E+ EK +E   +E+   Q+EL+++K        +K    L  Q A    +S+  +EL 
Sbjct: 1030 EQEVQEKLRET--QEYNRIQKELEREKASLTLSLMEKEQRLLVLQEA----DSIRQQELS 1083

Query: 333  QVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTV 392
             + +       E K+L+ Q++++  E +   +    + ++    +   H  IT+Q+L   
Sbjct: 1084 ALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASH--ITEQQLRAS 1141

Query: 393  VKTQHEILRQVNEMKNSMSETVRLVSGMQHPGS 425
            +  Q     Q+     S    +  ++  Q PG+
Sbjct: 1142 LWAQEAKAAQLQLRLRSTESQLEALAAEQQPGN 1174



 Score = 33.5 bits (75), Expect = 0.47
 Identities = 40/194 (20%), Positives = 79/194 (40%), Gaps = 22/194 (11%)

Query: 266  QLTEPGKEPPTPDKEISEKE----KEKYQEEFEHFQQELDKKKEEFQKGHPDL-----QG 316
            Q  + GK      K   EKE    +EK+++E    QQEL K  E  ++   +L     + 
Sbjct: 835  QAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQ 894

Query: 317  QPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAG 376
            Q   E  ++  + E  Q      ++ LE ++    L   L + ++ ++  ++++ +    
Sbjct: 895  QTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQD 954

Query: 377  MPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVRLVSGMQHPGSAGGVYETTQHF 436
            M  Q  ++ +QE   +++T      Q+ E +  + E  R     QH      + E +   
Sbjct: 955  MKVQ--KLKEQETTGILQT------QLQEAQRELKEAAR-----QHRDDLAALQEESSSL 1001

Query: 437  IDIKEHLHIVKRDI 450
            +  K  L     D+
Sbjct: 1002 LQDKMDLQKQVEDL 1015


>gi|4505257 moesin [Homo sapiens]
          Length = 577

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 7/131 (5%)

Query: 282 SEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRI 341
           ++  +EK+Q++ E    E +KKK E  +   +   +  EE+ E      L+Q+ E   + 
Sbjct: 307 AQAREEKHQKQMERAMLENEKKKREMAEKEKEKIEREKEELME-----RLKQIEEQTKKA 361

Query: 342 HLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILR 401
             E+++  R+  + L+++R+   S  E+++K           + Q   D   KTQ ++  
Sbjct: 362 QQELEEQTRRA-LELEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQ-KKTQEQLAL 419

Query: 402 QVNEMKNSMSE 412
           ++ E+   +S+
Sbjct: 420 EMAELTARISQ 430



 Score = 33.5 bits (75), Expect = 0.47
 Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 27/144 (18%)

Query: 279 KEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQ----------------PAEEI 322
           +E++EKEKEK + E E   + L + +E+ +K   +L+ Q                 AE++
Sbjct: 330 REMAEKEKEKIEREKEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKRAQSEAEKL 389

Query: 323 FESVGDRE---------LRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKR 373
            +   + E          R   + Q ++ LE+ +L  ++  +   +++  S   E   K 
Sbjct: 390 AKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAVEWQQK- 448

Query: 374 GAGMPGQHGQITQQELDTVVKTQH 397
            A M  +  + T+ EL T + T H
Sbjct: 449 -AQMVQEDLEKTRAELKTAMSTPH 471


>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 436

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 30/147 (20%), Positives = 72/147 (48%), Gaps = 8/147 (5%)

Query: 266 QLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFES 325
           Q+ E   +    ++++ E+E++  ++E +  +QE   +K+E Q G  + Q Q  EE  + 
Sbjct: 193 QMGEQEGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQ- 251

Query: 326 VGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQIT 385
              ++  Q+ + + ++  + +Q+  Q + +L ++ +  +   E+  ++   M  Q  Q+ 
Sbjct: 252 ---KQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQ--TEQEEQTGEQEEQMREQEEQMR 306

Query: 386 QQELDTVVKTQHEILRQVNEMKNSMSE 412
           +QE    ++ Q E +R+  E      E
Sbjct: 307 EQE--EQMREQEEQMREQEEQMGKQEE 331



 Score = 36.6 bits (83), Expect = 0.056
 Identities = 31/137 (22%), Positives = 74/137 (54%), Gaps = 6/137 (4%)

Query: 266 QLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFES 325
           Q+ E   +    + ++ E+E +  ++E +  +QE   +++E Q G  + +GQ  E+  E 
Sbjct: 151 QVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQMG--EQEGQMGEQ-EEQ 207

Query: 326 VGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQIT 385
           +G++E  Q+ + + ++  + +Q+ +Q +  + EQ   V    E++ K+   M  Q  Q+ 
Sbjct: 208 MGEQE-EQMQKQEEQMGEQEEQMRKQEEQ-MGEQEEQVQKQEEQVQKQEEQMRKQEEQMR 265

Query: 386 QQELDTVVKTQHEILRQ 402
           +QE + + + + ++L+Q
Sbjct: 266 EQE-EQMREQEEQMLKQ 281



 Score = 35.8 bits (81), Expect = 0.095
 Identities = 32/154 (20%), Positives = 74/154 (48%), Gaps = 16/154 (10%)

Query: 266 QLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFES 325
           Q+ E   +    + ++ E+E +  ++E +  +QE   +K+E Q G  + Q +  E   E 
Sbjct: 179 QVREQEGQVREQEGQMGEQEGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQE---EQ 235

Query: 326 VGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQIT 385
           +G++E  QV + + ++  + +Q+ +Q + + +++        E++ ++   M  Q  Q  
Sbjct: 236 MGEQE-EQVQKQEEQVQKQEEQMRKQEEQMREQE--------EQMREQEEQMLKQKEQTE 286

Query: 386 QQ----ELDTVVKTQHEILRQVNEMKNSMSETVR 415
           Q+    E +  ++ Q E +R+  E      E +R
Sbjct: 287 QEEQTGEQEEQMREQEEQMREQEEQMREQEEQMR 320



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 13/148 (8%)

Query: 266 QLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFES 325
           Q+ E   +    + ++ E+E +  ++E +  +QE    ++E Q G  + Q Q  EE    
Sbjct: 165 QVREQEGQVREQEGQVREQEGQVREQEGQMGEQEGQMGEQEEQMGEQEEQMQKQEE---- 220

Query: 326 VGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQIT 385
                  Q+ E + ++  + +Q+  Q + +  +Q   V    E++ K+   M  Q  Q+ 
Sbjct: 221 -------QMGEQEEQMRKQEEQMGEQEEQV-QKQEEQVQKQEEQMRKQEEQMREQEEQMR 272

Query: 386 QQELDTV-VKTQHEILRQVNEMKNSMSE 412
           +QE   +  K Q E   Q  E +  M E
Sbjct: 273 EQEEQMLKQKEQTEQEEQTGEQEEQMRE 300



 Score = 33.5 bits (75), Expect = 0.47
 Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 26/173 (15%)

Query: 266 QLTEPGKEPPTPDKEISEKEKE-KYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIF- 323
           Q+ E  ++    ++++ E+E++ + QEE    Q+E  +K+EE  +   +   +  E++  
Sbjct: 221 QMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQMLK 280

Query: 324 --------ESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILD-------------EQRRY 362
                   E  G++E  Q+ E + ++  + +Q+  Q + + +             EQ+  
Sbjct: 281 QKEQTEQEEQTGEQE-EQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQ 339

Query: 363 VSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVR 415
           +    E++ K+   M  Q  Q+ +QE    V+ Q E +R+  E      E +R
Sbjct: 340 MWEQKEQMWKQEEQMGEQEEQMQKQE--EQVRKQEEQMRKQEEQMRKQEEQMR 390


>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
           sapiens]
          Length = 525

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 267 LTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESV 326
           LTEP +E P      +E+E+E+ +EE E  ++E +++  E Q G       PAEE     
Sbjct: 297 LTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEVQ-GEQPKPASPAEEDKMPP 355

Query: 327 GDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEIS 371
            D + +   +       + ++  R     L +    + +L +EIS
Sbjct: 356 YDEQTQAFIDAAQEARNKFEEAERS----LKDMEESIRNLEQEIS 396


>gi|115529449 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 15/36 (41%), Positives = 25/36 (69%)

Query: 279 KEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDL 314
           KE+ EK+K KY ++F+  +QE ++    F++ HPDL
Sbjct: 151 KELPEKKKMKYIQDFQREKQEFERNLARFREDHPDL 186


>gi|115529451 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 15/36 (41%), Positives = 25/36 (69%)

Query: 279 KEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDL 314
           KE+ EK+K KY ++F+  +QE ++    F++ HPDL
Sbjct: 151 KELPEKKKMKYIQDFQREKQEFERNLARFREDHPDL 186


>gi|7657671 upstream binding transcription factor, RNA polymerase I
           isoform a [Homo sapiens]
          Length = 764

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 15/36 (41%), Positives = 25/36 (69%)

Query: 279 KEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDL 314
           KE+ EK+K KY ++F+  +QE ++    F++ HPDL
Sbjct: 151 KELPEKKKMKYIQDFQREKQEFERNLARFREDHPDL 186


>gi|110347568 centrosomal protein 152kDa [Homo sapiens]
          Length = 1654

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 30/127 (23%), Positives = 66/127 (51%), Gaps = 7/127 (5%)

Query: 291 EEFEHFQQE-LDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLN 349
           ++F+H +QE +D+ +  +Q+ H  ++ Q  E +       E +Q+FE   R HL   QL 
Sbjct: 661 QDFDHDKQEAVDRCERTYQQHHEAMKTQIRESLLAKHA-LEKQQLFEAYERTHL---QLR 716

Query: 350 RQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQV-NEMKN 408
            +LD  L+++   V     E+ +    +     + T++E  T  K + ++++Q+  E ++
Sbjct: 717 SELDK-LNKEVTAVQECYLEVCREKDNLELTLRKTTEKEQQTQEKIKEKLIQQLEKEWQS 775

Query: 409 SMSETVR 415
            + +T++
Sbjct: 776 KLDQTIK 782



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 7/126 (5%)

Query: 291 EEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNR 350
           + FE  QQ+     E   +    +Q Q    +     +R+L  + E  N    +I+ LN 
Sbjct: 216 DTFEGLQQQFLGANENSAENMQIIQLQ----VLNKAKERQLENLIEKLNESERQIRYLNH 271

Query: 351 QLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNEMKNSM 410
           QL +I DE+     SL E    +     G+  +I  +     ++TQ + L+   E     
Sbjct: 272 QLVIIKDEKDGLTLSLRE---SQKLFQNGKEREIQLEAQIKALETQIQALKVNEEQMIKK 328

Query: 411 SETVRL 416
           S T  +
Sbjct: 329 SRTTEM 334



 Score = 29.6 bits (65), Expect = 6.8
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 11/82 (13%)

Query: 359  QRRYVSSLTEEISKRGAGM------PGQHGQ-----ITQQELDTVVKTQHEILRQVNEMK 407
            ++R ++ L+++ + +G G        G H Q      T+ E +   K   E++ + N+MK
Sbjct: 1114 KKRNMAELSKDSASQGTGQGDPGPAAGHHAQPLALQATEAEAEENNKVVEELIEENNDMK 1173

Query: 408  NSMSETVRLVSGMQHPGSAGGV 429
            N + E   L        SAG +
Sbjct: 1174 NKLEELQTLCKTPPRSLSAGAI 1195


>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
          Length = 1101

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 40/194 (20%), Positives = 85/194 (43%), Gaps = 6/194 (3%)

Query: 280 EISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQN 339
           E S +EK+   EE E FQ+E++K ++E  +   +L+ + A+   +        Q  E +N
Sbjct: 461 EASMQEKKSLLEEKERFQREVNKTEKEIVQERCNLEKELAKNKVDINTLTHNLQTLEEEN 520

Query: 340 RIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHG--QITQQELDTVVKTQH 397
           + HL  +  + +L  +  +         E+I++    +  ++G  QI  ++L+  V++  
Sbjct: 521 K-HLADQMASLELQQVTSDYHGLAQQKVEKITESKNKLAYENGKLQIKVKQLEEQVQSFT 579

Query: 398 EILRQVNEMK--NSMSETVRLVSGMQHPGSAGGVYETTQHFIDIKEHLHIVKRDIDNLVQ 455
           +   Q + ++  N   +T    +  +       + +   H  ++K  L   K ++   V+
Sbjct: 580 DTSLQNDHLRKMNKYLQTKYAQANSELSAKRVHLQQADAHLKEVKSILERSKEELSRTVK 639

Query: 456 -RNMPSNEKPKCPE 468
            RN    E  K  E
Sbjct: 640 CRNAALKESQKLKE 653


>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
          Length = 2325

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 5/133 (3%)

Query: 280  EISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQN 339
            E   KEKE  QE+ + ++++L + K        + + + +      +  R+L+Q  +  N
Sbjct: 1783 ECLSKEKEDLQEKCDIWEKKLAQTKRVLAAAEENSKMEQSNLEKLELNVRKLQQELDQLN 1842

Query: 340  RIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEI 399
            R  L +      +   L E+R  V+SL EE++         H  + +Q+L    K Q  +
Sbjct: 1843 RDKLSLHNDISAMQQQLQEKREAVNSLQEELAN-----VQDHLNLAKQDLLHTTKHQDVL 1897

Query: 400  LRQVNEMKNSMSE 412
            L +   ++  +SE
Sbjct: 1898 LSEQTRLQKDISE 1910


>gi|45446749 kinesin family member 5A [Homo sapiens]
          Length = 1032

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 12/134 (8%)

Query: 281 ISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDR-ELRQVFEGQN 339
           I+ +E++KY+EE     ++LD K +E  +     Q Q  E++ + + D+ EL     G N
Sbjct: 409 IAPEERQKYEEEIRRLYKQLDDKDDEINQ-----QSQLIEKLKQQMLDQEELLVSTRGDN 463

Query: 340 -RIHLEIKQLNRQLDMILDEQRRYVSSLTE-----EISKRGAGMPGQHGQITQQELDTVV 393
            ++  E+  L  + D   DE +  + +L E     +   +      Q  Q+   EL   V
Sbjct: 464 EKVQRELSHLQSENDAAKDEVKEVLQALEELAVNYDQKSQEVEEKSQQNQLLVDELSQKV 523

Query: 394 KTQHEILRQVNEMK 407
            T   +  ++  ++
Sbjct: 524 ATMLSLESELQRLQ 537



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 32/181 (17%), Positives = 82/181 (45%), Gaps = 11/181 (6%)

Query: 280 EISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQN 339
           E++ K+KE   ++ +  ++ L+ + E  ++ H     +  +EI E    + + ++ +   
Sbjct: 679 EVALKDKEPDTQDADEVKKALELQMESHREAHHRQLARLRDEINEK--QKTIDELKDLNQ 736

Query: 340 RIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEI 399
           ++ LE+++L    + +  E+    + L E        +  +H Q ++Q+L  + +T    
Sbjct: 737 KLQLELEKLQADYEKLKSEEHEKSTKLQEL-----TFLYERHEQ-SKQDLKGLEETVARE 790

Query: 400 LRQVNEMKNSMSETVRL---VSGMQHPGSAGGVYETTQHFIDIKEHLHIVKRDIDNLVQR 456
           L+ ++ ++    + V      S    P  +GG++   Q    ++ +L  + +    LV+ 
Sbjct: 791 LQTLHNLRKLFVQDVTTRVKKSAEMEPEDSGGIHSQKQKISFLENNLEQLTKVHKQLVRD 850

Query: 457 N 457
           N
Sbjct: 851 N 851


>gi|149363664 septin 8 isoform d [Homo sapiens]
          Length = 369

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 286 KEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEI 345
           +E Y+ + + F  EL +K+EE ++   +   +   E+ E   +REL + FE   R+H E 
Sbjct: 263 QETYEAKRKEFLSELQRKEEEMRQMFVNKVKETELELKEK--ERELHEKFEHLKRVHQEE 320

Query: 346 KQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNE 405
           K+        ++E+RR +   T   ++R A +     Q        +  T  + LR+  +
Sbjct: 321 KRK-------VEEKRRELEEETNAFNRRKAAVEALQSQ-------ALHATSQQPLRKDKD 366

Query: 406 MKN 408
            KN
Sbjct: 367 KKN 369


>gi|149363689 septin 8 isoform a [Homo sapiens]
          Length = 483

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 286 KEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEI 345
           +E Y+ + + F  EL +K+EE ++   +   +   E+ E   +REL + FE   R+H E 
Sbjct: 323 QETYEAKRKEFLSELQRKEEEMRQMFVNKVKETELELKEK--ERELHEKFEHLKRVHQEE 380

Query: 346 KQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNE 405
           K+        ++E+RR +   T   ++R A +     Q        +  T  + LR+  +
Sbjct: 381 KRK-------VEEKRRELEEETNAFNRRKAAVEALQSQ-------ALHATSQQPLRKDKD 426

Query: 406 MKN 408
            KN
Sbjct: 427 KKN 429


>gi|149363661 septin 8 isoform b [Homo sapiens]
          Length = 429

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 286 KEKYQEEFEHFQQELDKKKEEFQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEI 345
           +E Y+ + + F  EL +K+EE ++   +   +   E+ E   +REL + FE   R+H E 
Sbjct: 323 QETYEAKRKEFLSELQRKEEEMRQMFVNKVKETELELKEK--ERELHEKFEHLKRVHQEE 380

Query: 346 KQLNRQLDMILDEQRRYVSSLTEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNE 405
           K+        ++E+RR +   T   ++R A +     Q        +  T  + LR+  +
Sbjct: 381 KRK-------VEEKRRELEEETNAFNRRKAAVEALQSQ-------ALHATSQQPLRKDKD 426

Query: 406 MKN 408
            KN
Sbjct: 427 KKN 429


>gi|157042792 coiled-coil domain containing 64B [Homo sapiens]
          Length = 508

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 32/178 (17%)

Query: 266 QLTEPGKEPPT--PDKEISEKEKE--KYQEEFEHFQQELDKKKEEFQKGHPDLQGQ--PA 319
           ++ EP K+  +  P + + EKE E  K Q+E    Q EL   +EE Q+   +L+ Q  P 
Sbjct: 339 EILEPPKKRTSLSPAEILEEKEVEVAKLQDEISLQQAELQSLREELQR-QKELRAQEDPG 397

Query: 320 EEIFESVGDRE--LRQVFE---GQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRG 374
           E +  ++ DR+  + +  E     NR+ LE   L+R+L   +    R   +LT+E+    
Sbjct: 398 EALHSALSDRDEAVNKALELSLQLNRVSLERDSLSRELLRAI----RQKVALTQEL---- 449

Query: 375 AGMPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVRLV----SGMQHPGSAGG 428
                   +  Q ++  V+  Q    RQ     ++ S T R      S    PG AGG
Sbjct: 450 --------EAWQDDMQVVIGQQLRSQRQKELSASASSSTPRRAAPRFSLRLGPGPAGG 499


>gi|239741668 PREDICTED: upstream binding transcription factor, RNA
           polymerase I-like 3 [Homo sapiens]
          Length = 457

 Score = 37.4 bits (85), Expect = 0.033
 Identities = 15/36 (41%), Positives = 26/36 (72%)

Query: 279 KEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDL 314
           KE+ E+ K+KY ++F+  +QE ++K   F++ HPDL
Sbjct: 203 KELPEQMKQKYIQDFQKEKQEFEEKLVRFREEHPDL 238


>gi|169163306 PREDICTED: upstream binding transcription factor, RNA
           polymerase I-like 5 [Homo sapiens]
          Length = 471

 Score = 37.4 bits (85), Expect = 0.033
 Identities = 15/36 (41%), Positives = 26/36 (72%)

Query: 279 KEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDL 314
           KE+ E+ K+KY ++F+  +QE ++K   F++ HPDL
Sbjct: 217 KELPEQMKQKYIQDFQKEKQEFEEKLVRFREEHPDL 252


>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
           sapiens]
          Length = 1002

 Score = 37.4 bits (85), Expect = 0.033
 Identities = 41/216 (18%), Positives = 85/216 (39%), Gaps = 19/216 (8%)

Query: 253 LADDHDVLSFLTFQLTEPGKEPPTPDKEISEK------EKEKYQEEFEHFQQELDKKKEE 306
           L  + D L    ++ T+  ++      E+ EK      EK   Q   E  Q++L+  +  
Sbjct: 289 LTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELL 348

Query: 307 FQKGHPDLQGQPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSL 366
            Q+     +   A +        +L+Q  E + ++   + Q+   +  +  E+ +Y  +L
Sbjct: 349 LQQFSSRCEAPDANQ--------QLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENL 400

Query: 367 TEEISKRGAGMPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVRLVSGMQHPGSA 426
             E     + M  Q  Q   +++ T+ + +   + +V E++ S++E    ++    P   
Sbjct: 401 KGE-----SAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMAEPPPPEPP 455

Query: 427 GGVYETTQHFIDIKEHLHIVKRDIDNLVQRNMPSNE 462
            G  E  Q      EHL      +   +Q  +  NE
Sbjct: 456 AGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNE 491



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 13/168 (7%)

Query: 260 LSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQG--- 316
           L+ L  Q+ EP   PP P    SE E++  Q E EH ++EL+    + Q    D +G   
Sbjct: 439 LAELRNQMAEP--PPPEPPAGPSEVEQQ-LQAEAEHLRKELEGLAGQLQAQVQDNEGLSR 495

Query: 317 ---QPAEEIFESVGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKR 373
              +  E + E     EL        R  LE  Q +R        Q R +     E+   
Sbjct: 496 LNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSG 555

Query: 374 GAGMPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMS---ETVRLVS 418
              +  ++ +IT   L +    + E+ +++ E++  +S   ETV L S
Sbjct: 556 FVKLTNENMEIT-SALQSEQHVKRELGKKLGELQEKLSELKETVELKS 602


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,788,033
Number of Sequences: 37866
Number of extensions: 998940
Number of successful extensions: 6950
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 290
Number of HSP's that attempted gapping in prelim test: 5745
Number of HSP's gapped (non-prelim): 1140
length of query: 510
length of database: 18,247,518
effective HSP length: 107
effective length of query: 403
effective length of database: 14,195,856
effective search space: 5720929968
effective search space used: 5720929968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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