Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: LMAN2L Sequence: fasta or formatted (348aa) NCBI GI: 13540594
Description:

lectin, mannose-binding 2-like isoform 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [359aa] lectin, mannose-binding 2-like isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         12           2
 C cysteine            1.1          4           1
 D aspartate           5.2         18           1
 E glutamate           4.9         17           3
 F phenylalanine       4.9         17           2
 G glycine             9.2         32           2
 H histidine           2.9         10           1
 I isoleucine          4.6         16           2
 K lysine              4.6         16           2
 L leucine            11.8         41           7
 M methionine          3.7         13           2
 N asparagine          3.4         12           2
 P proline             5.2         18           2
 Q glutamine           4.9         17           2
 R arginine            6.3         22           2
 S serine              6.3         22           3
 T threonine           4.6         16           1
 V valine              6.9         24           1
 W tryptophan          2.3          8           1
 Y tyrosine            3.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lectin, mannose-binding 2-like isoform 2 
LMAN2L                0.987   lectin, mannose-binding 2-like isoform 1 
LMAN2                 0.520   lectin, mannose-binding 2 precursor 
LMAN1                 0.185   lectin, mannose-binding, 1 precursor 
LMAN1L                0.131   lectin, mannose-binding, 1 like 
KIAA1109              0.011   fragile site-associated protein 
SNX11                 0.007   sorting nexin 11 
SNX11                 0.007   sorting nexin 11 
SERPINA10             0.007   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINA10             0.007   serine (or cysteine) proteinase inhibitor, clade A (a...
ZNF264                0.007   zinc finger protein 264 
PRX                   0.006   periaxin isoform 2 
HEPACAM2              0.006   HEPACAM family member 2 isoform 2 
HEPACAM2              0.006   HEPACAM family member 2 isoform 1 
PVR                   0.004   poliovirus receptor isoform delta 
PVR                   0.004   poliovirus receptor isoform alpha 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press