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Search of human proteins with 5031825
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031825 ring finger protein 103 [Homo sapiens]
(685 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031825 ring finger protein 103 [Homo sapiens] 1433 0.0
gi|14149702 ring finger protein 167 [Homo sapiens] 56 1e-07
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 52 1e-06
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 52 1e-06
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 52 1e-06
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 52 1e-06
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 52 1e-06
gi|7662486 ring finger protein 44 [Homo sapiens] 52 2e-06
gi|150170725 zinc and ring finger 4 [Homo sapiens] 52 2e-06
gi|34577087 ring finger protein 13 [Homo sapiens] 51 3e-06
gi|6005864 ring finger protein 13 [Homo sapiens] 51 3e-06
gi|57165361 ring finger protein 165 [Homo sapiens] 50 5e-06
gi|7706039 ring finger protein 181 [Homo sapiens] 50 9e-06
gi|29788758 ring finger protein 130 [Homo sapiens] 50 9e-06
gi|37595553 ring finger protein 111 [Homo sapiens] 49 2e-05
gi|38045931 ring finger protein 122 [Homo sapiens] 49 2e-05
gi|29789407 ring finger protein 149 [Homo sapiens] 48 3e-05
gi|37622894 ring finger protein 126 [Homo sapiens] 48 3e-05
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 47 4e-05
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 47 6e-05
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 47 6e-05
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 47 6e-05
gi|150378447 zinc and ring finger 3 [Homo sapiens] 47 6e-05
gi|5174653 ring finger protein 6 [Homo sapiens] 47 8e-05
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 47 8e-05
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 47 8e-05
gi|56711322 ring finger protein 43 [Homo sapiens] 47 8e-05
gi|34305295 ring finger protein 6 [Homo sapiens] 47 8e-05
gi|34305293 ring finger protein 6 [Homo sapiens] 47 8e-05
gi|58331204 ring finger protein 150 [Homo sapiens] 45 2e-04
>gi|5031825 ring finger protein 103 [Homo sapiens]
Length = 685
Score = 1433 bits (3709), Expect = 0.0
Identities = 685/685 (100%), Positives = 685/685 (100%)
Query: 1 MWLKLFFLLLYFLVLFVLARFFEAIVWYETGIFATQLVDPVALSFKKLKTILECRGLGYS 60
MWLKLFFLLLYFLVLFVLARFFEAIVWYETGIFATQLVDPVALSFKKLKTILECRGLGYS
Sbjct: 1 MWLKLFFLLLYFLVLFVLARFFEAIVWYETGIFATQLVDPVALSFKKLKTILECRGLGYS 60
Query: 61 GLPEKKDVRELVEKSGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVEDTKDGIWL 120
GLPEKKDVRELVEKSGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVEDTKDGIWL
Sbjct: 61 GLPEKKDVRELVEKSGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVEDTKDGIWL 120
Query: 121 VQVIANDRSPLVGKIHWEKMVKKVSRFGIRTGTFNCSSDPRYCRRRGWVRSTLIMSVPQT 180
VQVIANDRSPLVGKIHWEKMVKKVSRFGIRTGTFNCSSDPRYCRRRGWVRSTLIMSVPQT
Sbjct: 121 VQVIANDRSPLVGKIHWEKMVKKVSRFGIRTGTFNCSSDPRYCRRRGWVRSTLIMSVPQT 180
Query: 181 STSKGKVMLKEYSGRKIEVEHIFKWITAHAASRIKTIYNAEHLKEEWNKSDQYWLKIYLF 240
STSKGKVMLKEYSGRKIEVEHIFKWITAHAASRIKTIYNAEHLKEEWNKSDQYWLKIYLF
Sbjct: 181 STSKGKVMLKEYSGRKIEVEHIFKWITAHAASRIKTIYNAEHLKEEWNKSDQYWLKIYLF 240
Query: 241 ANLDQPPAFFSALSIKFTGRVEFIFVNVENWDNKSYMTDIGIYNMPSYILRTPEGIYRYG 300
ANLDQPPAFFSALSIKFTGRVEFIFVNVENWDNKSYMTDIGIYNMPSYILRTPEGIYRYG
Sbjct: 241 ANLDQPPAFFSALSIKFTGRVEFIFVNVENWDNKSYMTDIGIYNMPSYILRTPEGIYRYG 300
Query: 301 NHTGEFISLQAMDSFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATIKRFVVLISTL 360
NHTGEFISLQAMDSFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATIKRFVVLISTL
Sbjct: 301 NHTGEFISLQAMDSFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATIKRFVVLISTL 360
Query: 361 GTYNSLLIISWLPVLGFLQLPYLDSFYEYSLKLLRYSNTTTLASWVRADWMFYSSHPALF 420
GTYNSLLIISWLPVLGFLQLPYLDSFYEYSLKLLRYSNTTTLASWVRADWMFYSSHPALF
Sbjct: 361 GTYNSLLIISWLPVLGFLQLPYLDSFYEYSLKLLRYSNTTTLASWVRADWMFYSSHPALF 420
Query: 421 LSTYLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYTSYLFHPIASFQNFPVES 480
LSTYLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYTSYLFHPIASFQNFPVES
Sbjct: 421 LSTYLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYTSYLFHPIASFQNFPVES 480
Query: 481 DWDEDPDLFLERLAFPDLWLHPLIPTDYIKNLPMWRFKCLGVQSEEEMSEGSQDTENDSE 540
DWDEDPDLFLERLAFPDLWLHPLIPTDYIKNLPMWRFKCLGVQSEEEMSEGSQDTENDSE
Sbjct: 481 DWDEDPDLFLERLAFPDLWLHPLIPTDYIKNLPMWRFKCLGVQSEEEMSEGSQDTENDSE 540
Query: 541 SENTDTLSSEKEVFEDKQSVLHNSPGTASHCDAEACSCANKYCQTSPCERKGRSYGSYNT 600
SENTDTLSSEKEVFEDKQSVLHNSPGTASHCDAEACSCANKYCQTSPCERKGRSYGSYNT
Sbjct: 541 SENTDTLSSEKEVFEDKQSVLHNSPGTASHCDAEACSCANKYCQTSPCERKGRSYGSYNT 600
Query: 601 NEDMEPDWLTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCP 660
NEDMEPDWLTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCP
Sbjct: 601 NEDMEPDWLTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCP 660
Query: 661 VCRWPSYKKKQPYAQHQPLSNDVPS 685
VCRWPSYKKKQPYAQHQPLSNDVPS
Sbjct: 661 VCRWPSYKKKQPYAQHQPLSNDVPS 685
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 56.2 bits (134), Expect = 1e-07
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWPSYK 668
C +CL+ +E+G L LPC H +H C+ WL R CP+C+ P ++
Sbjct: 230 CAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHR 277
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 52.4 bits (124), Expect = 1e-06
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 619 TECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
T CVVC+ +FE+ LL LPC H FH C+ WL R CP+CR
Sbjct: 378 TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR-TCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 52.4 bits (124), Expect = 1e-06
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 619 TECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
T CVVC+ +FE+ LL LPC H FH C+ WL R CP+CR
Sbjct: 378 TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR-TCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 52.4 bits (124), Expect = 1e-06
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 619 TECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
T CVVC+ +FE+ LL LPC H FH C+ WL R CP+CR
Sbjct: 411 TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR-TCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 52.4 bits (124), Expect = 1e-06
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 619 TECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
T CVVC+ +FE+ LL LPC H FH C+ WL R CP+CR
Sbjct: 378 TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR-TCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 52.4 bits (124), Expect = 1e-06
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 619 TECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
T CVVC+ +FE+ LL LPC H FH C+ WL R CP+CR
Sbjct: 461 TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR-TCPICR 504
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 52.0 bits (123), Expect = 2e-06
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 619 TECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
T CVVC +FE LL LPC H FH C+ WL R CP+CR
Sbjct: 378 TLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANR-TCPICR 421
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 51.6 bits (122), Expect = 2e-06
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 19/92 (20%)
Query: 573 AEACSCANKYCQTSPCERKGRSYGSYNTNEDMEPDWLTWPADMLHCTECVVCLENFENGC 632
A+AC + +TS C++ + TW D+ C +CL+ +E G
Sbjct: 279 AQACCSHRRPVKTSTCQKA-------------QVRTFTWHNDL-----CAICLDEYEEGD 320
Query: 633 LLMGLPCGHVFHQNCIVMWLA-GGRHCCPVCR 663
L LPC H +H CI W + R CPVC+
Sbjct: 321 QLKILPCSHTYHCKCIDPWFSQAPRRSCPVCK 352
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 51.2 bits (121), Expect = 3e-06
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
C +CL+ +E+G L LPC H +H C+ WL + CPVC+
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 51.2 bits (121), Expect = 3e-06
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
C +CL+ +E+G L LPC H +H C+ WL + CPVC+
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 50.4 bits (119), Expect = 5e-06
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 541 SENTDTLSSEKEVFEDKQSVLHNSPGTASHCDAEACSCANKYCQTSPCERKGRSYGSYNT 600
S +T + E + L N A E + +KY + P + KG+ +
Sbjct: 229 SRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKK----DE 284
Query: 601 NEDMEPDWLTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCP 660
E+ + D +C +CL E+G + LPC H+FHQ C+ WLA + CP
Sbjct: 285 GEESDTD-----------EKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKK-CP 332
Query: 661 VCR 663
+CR
Sbjct: 333 ICR 335
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 49.7 bits (117), Expect = 9e-06
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 620 ECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWPSYKKKQPYAQHQ 677
+C VCL FE + +PC H+FH +CI+ WL+ + CP+CR+ Y +H+
Sbjct: 75 KCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLS-KTNSCPLCRYELPTDDDTYEEHR 131
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 49.7 bits (117), Expect = 9e-06
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHC-CPVCR 663
C VC+E+++ ++ LPC HVFH++C+ WL+ HC CP+C+
Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLS--EHCTCPMCK 305
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 48.9 bits (115), Expect = 2e-05
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 19/97 (19%)
Query: 568 ASHCDAEACSCANKYCQTS-PCERKGRSYGSYNTNEDMEPDWLTWPADMLHCTECVVCLE 626
AS E C+ +KY + C++ G T ED E +C +CL
Sbjct: 897 ASQGTIERCTYPHKYKKRKLHCKQDGEE----GTEEDTEE-------------KCTICLS 939
Query: 627 NFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
E G + LPC H+FHQ C+ WL + CP+CR
Sbjct: 940 ILEEGEDVRRLPCMHLFHQVCVDQWLITNKK-CPICR 975
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 48.9 bits (115), Expect = 2e-05
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 616 LHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWP 665
L+ C VCLE+F+ L LPC H FH+ C+V WL R CP+C P
Sbjct: 88 LYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLE-VRCVCPMCNKP 136
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 48.1 bits (113), Expect = 3e-05
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
C VC+ENF+ ++ LPC H+FH+ CI WL R CP+C+
Sbjct: 269 CAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHR-TCPMCK 310
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 48.1 bits (113), Expect = 3e-05
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 620 ECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
EC VC +++ G + LPC H+FH CIV WL CPVCR
Sbjct: 228 ECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLE-QHDSCPVCR 270
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 47.4 bits (111), Expect = 4e-05
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 22/139 (15%)
Query: 526 EEMSEGSQ-DTENDSESENTDTLSSEKEVFEDKQSVLHNSPGTASHCDAEACSCANKYCQ 584
EE S GS D+ +DS+SE+ D E E +++ + S S D E +
Sbjct: 32 EESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSEDDGETL------LE 85
Query: 585 TSPCERKGRSYGSYNTNEDMEPDWLTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFH 644
+ + K + GS+N+++D E C +CL F + + C H F
Sbjct: 86 VAGTQGKLEAAGSFNSDDDAE--------------SCPICLNAFRDQAVGTPENCAHYFC 131
Query: 645 QNCIVMWLAGGRHCCPVCR 663
+CIV W + + CPV R
Sbjct: 132 LDCIVEW-SKNANSCPVDR 149
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 47.0 bits (110), Expect = 6e-05
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWPSYKKKQPYAQ 675
C VCLE+F+ L PC H FH+ C++ WL R CP+C P + Q +++
Sbjct: 99 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE-VRKVCPLCNMPVLQLAQLHSK 152
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 47.0 bits (110), Expect = 6e-05
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWPSYKKKQPYAQ 675
C VCLE+F+ L PC H FH+ C++ WL R CP+C P + Q +++
Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE-VRKVCPLCNMPVLQLAQLHSK 131
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 47.0 bits (110), Expect = 6e-05
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWPSYKKKQPYAQ 675
C VCLE+F+ L PC H FH+ C++ WL R CP+C P + Q +++
Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE-VRKVCPLCNMPVLQLAQLHSK 131
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 47.0 bits (110), Expect = 6e-05
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 619 TECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
++C +CLE + +G L +PC H FH+ C+ WL H CP CR
Sbjct: 191 SDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLL-QHHTCPHCR 234
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 46.6 bits (109), Expect = 8e-05
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHC-CPVCRWP 665
C VC+ ++ G L LPC H FH +CI WL+ +C CP+CR P
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS--ENCTCPICRQP 675
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 46.6 bits (109), Expect = 8e-05
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 620 ECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWP 665
ECV+CL F G + LPC H FH +CI WL CP CR P
Sbjct: 87 ECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRS-FTCPYCRGP 131
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 46.6 bits (109), Expect = 8e-05
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 620 ECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWP 665
ECV+CL F G + LPC H FH +CI WL CP CR P
Sbjct: 87 ECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRS-FTCPYCRGP 131
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 46.6 bits (109), Expect = 8e-05
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 611 WPADMLHCTE---CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVC 662
WP C+ C +CLE F G L + C H FH+NC+ WL R CP+C
Sbjct: 259 WPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHR-TCPLC 312
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 46.6 bits (109), Expect = 8e-05
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHC-CPVCRWP 665
C VC+ ++ G L LPC H FH +CI WL+ +C CP+CR P
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS--ENCTCPICRQP 675
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 46.6 bits (109), Expect = 8e-05
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHC-CPVCRWP 665
C VC+ ++ G L LPC H FH +CI WL+ +C CP+CR P
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS--ENCTCPICRQP 675
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 45.4 bits (106), Expect = 2e-04
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCR 663
C VC+E ++ ++ LPC H+FH++C+ WL R CP+C+
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHR-TCPMCK 319
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,185,730
Number of Sequences: 37866
Number of extensions: 1235202
Number of successful extensions: 4455
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 4326
Number of HSP's gapped (non-prelim): 231
length of query: 685
length of database: 18,247,518
effective HSP length: 109
effective length of query: 576
effective length of database: 14,120,124
effective search space: 8133191424
effective search space used: 8133191424
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.