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Search of human proteins with 4827071
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4827071 zinc finger protein 9 isoform 3 [Homo sapiens]
(177 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4827071 zinc finger protein 9 isoform 3 [Homo sapiens] 401 e-112
gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens] 396 e-111
gi|187608726 zinc finger protein 9 isoform 1 [Homo sapiens] 396 e-111
gi|187608750 zinc finger protein 9 isoform 6 [Homo sapiens] 379 e-106
gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens] 375 e-104
gi|187608738 zinc finger protein 9 isoform 4 [Homo sapiens] 374 e-104
gi|42558260 zinc finger, CCHC domain containing 13 [Homo sapiens] 216 6e-57
gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens] 62 3e-10
gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens] 57 1e-08
gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens] 57 1e-08
gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens] 57 1e-08
gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens] 54 5e-08
gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Ho... 46 1e-05
gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Ho... 44 1e-04
gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens] 43 1e-04
gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens] 43 1e-04
gi|190610025 zinc finger protein 93 homolog [Homo sapiens] 43 2e-04
gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Ho... 43 2e-04
gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens] 39 0.002
gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens] 39 0.002
gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens] 39 0.002
gi|189571667 zinc finger protein 696 [Homo sapiens] 39 0.002
gi|51972214 lin-28 homolog B [Homo sapiens] 39 0.002
gi|224177533 zinc finger protein LOC400713 [Homo sapiens] 39 0.002
gi|13375938 lin-28 homolog [Homo sapiens] 39 0.003
gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens] 38 0.004
gi|22749145 ring finger protein 217 [Homo sapiens] 38 0.005
gi|147905620 PR domain containing 9 [Homo sapiens] 37 0.007
gi|122937213 zinc finger protein 99 [Homo sapiens] 37 0.007
gi|169213834 PREDICTED: similar to hCG36734 [Homo sapiens] 37 0.012
>gi|4827071 zinc finger protein 9 isoform 3 [Homo sapiens]
Length = 177
Score = 401 bits (1030), Expect = e-112
Identities = 177/177 (100%), Positives = 177/177 (100%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 120
GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 120
Query: 121 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
>gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens]
Length = 178
Score = 396 bits (1018), Expect = e-111
Identities = 177/178 (99%), Positives = 177/178 (99%), Gaps = 1/178 (0%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 61 GHLAKDCDLQED-ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC 119
GHLAKDCDLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC 120
Query: 120 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 178
>gi|187608726 zinc finger protein 9 isoform 1 [Homo sapiens]
Length = 179
Score = 396 bits (1017), Expect = e-111
Identities = 177/179 (98%), Positives = 177/179 (98%), Gaps = 2/179 (1%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 61 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 118
GHLAKDCDLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
Query: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
>gi|187608750 zinc finger protein 9 isoform 6 [Homo sapiens]
Length = 170
Score = 379 bits (974), Expect = e-106
Identities = 170/177 (96%), Positives = 170/177 (96%), Gaps = 7/177 (3%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
Query: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 120
GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY
Sbjct: 54 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 113
Query: 121 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 114 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
>gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens]
Length = 171
Score = 375 bits (962), Expect = e-104
Identities = 170/178 (95%), Positives = 170/178 (95%), Gaps = 8/178 (4%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
Query: 61 GHLAKDCDLQED-ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC 119
GHLAKDCDLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC
Sbjct: 54 GHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC 113
Query: 120 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 114 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 171
>gi|187608738 zinc finger protein 9 isoform 4 [Homo sapiens]
Length = 172
Score = 374 bits (961), Expect = e-104
Identities = 170/179 (94%), Positives = 170/179 (94%), Gaps = 9/179 (5%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
Query: 61 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 118
GHLAKDCDLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 54 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 113
Query: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 114 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
>gi|42558260 zinc finger, CCHC domain containing 13 [Homo sapiens]
Length = 166
Score = 216 bits (551), Expect = 6e-57
Identities = 101/152 (66%), Positives = 110/152 (72%), Gaps = 7/152 (4%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
MSS + F CG SGHWAR CP GG GR R G G RG Q S++L CY CGES
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGR--RGGGHG-----RGSQCGSTTLSYTCYCCGES 53
Query: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 120
G AK+C L + CYNCGR GHIAKDCK+PKRER Q CY CG+ GHLARDCD EQKCY
Sbjct: 54 GRNAKNCVLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQKEQKCY 113
Query: 121 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSK 152
SCG+ GHIQKDC +VKCYRCGE GHVAINCSK
Sbjct: 114 SCGKLGHIQKDCAQVKCYRCGEIGHVAINCSK 145
Score = 35.0 bits (79), Expect = 0.034
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 120 YSCGEFGHIQKDCTKVKC--YRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 173
++CG GH + C + R G G + S T CY CGESG A+ C +
Sbjct: 7 FACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVL 62
>gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens]
Length = 543
Score = 62.0 bits (149), Expect = 3e-10
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 44 QFVSSSLPDICYRCGESGHLAKDCDLQEDA--CYNCGRGGHIAKDCKEPKREREQCCYNC 101
++ S++ IC C + GHL+K+C L C+ C R GH+ C P C C
Sbjct: 233 RYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP------LCEYC 286
Query: 102 GKPGHLARDC--DHADEQKCYSCGEFGHIQKDCTKV-----KCYRCGETGHVAINCSKTS 154
P L C H+ +++C C GH CT++ + G ++
Sbjct: 287 PVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSA 346
Query: 155 EVNCYRCGESGHLAREC 171
CY C + GH EC
Sbjct: 347 LAYCYHCAQKGHYGHEC 363
Score = 26.9 bits (58), Expect = 9.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 6 CFKCGRSGHWARECP 20
C+ C + GH+ ECP
Sbjct: 350 CYHCAQKGHYGHECP 364
>gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 53 ICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCK---EPKREREQC--CYN 100
+C+ C + GH DC D+ CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 101 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 132
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 88 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 135
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 136 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 171
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 33/125 (26%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
CF C + GH +CP + ++ G ICYRCG + H
Sbjct: 130 CFHCRKPGHGIADCPAA------LENQDMG---------------TGICYRCGSTEHEIT 168
Query: 66 DCDLQEDA---------CYNCGRGGHIAKDCKE-PKREREQC--CYNCGKPGHLARDCDH 113
C + D C+ CG GH+++ C + PK C CG HL +DC
Sbjct: 169 KCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Query: 114 ADEQK 118
+ +
Sbjct: 229 SQNSE 233
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 26/96 (27%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
M + C++CG + H +C G F F C+ CGE
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALG-------------EFPFAK------CFVCGEM 192
Query: 61 GHLAKDC-----DLQED--ACYNCGRGGHIAKDCKE 89
GHL++ C L D C CG H+ KDC E
Sbjct: 193 GHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
>gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 53 ICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCK---EPKREREQC--CYN 100
+C+ C + GH DC D+ CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 101 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 132
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 88 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 135
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 136 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 171
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 33/125 (26%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
CF C + GH +CP + ++ G ICYRCG + H
Sbjct: 130 CFHCRKPGHGIADCPAA------LENQDMG---------------TGICYRCGSTEHEIT 168
Query: 66 DCDLQEDA---------CYNCGRGGHIAKDCKE-PKREREQC--CYNCGKPGHLARDCDH 113
C + D C+ CG GH+++ C + PK C CG HL +DC
Sbjct: 169 KCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Query: 114 ADEQK 118
+ +
Sbjct: 229 SQNSE 233
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 26/96 (27%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
M + C++CG + H +C G F F C+ CGE
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALG-------------EFPFAK------CFVCGEM 192
Query: 61 GHLAKDC-----DLQED--ACYNCGRGGHIAKDCKE 89
GHL++ C L D C CG H+ KDC E
Sbjct: 193 GHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
>gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 53 ICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCK---EPKREREQC--CYN 100
+C+ C + GH DC D+ CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 101 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 132
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 88 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 135
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 136 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 171
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 33/125 (26%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
CF C + GH +CP + ++ G ICYRCG + H
Sbjct: 130 CFHCRKPGHGIADCPAA------LENQDMG---------------TGICYRCGSTEHEIT 168
Query: 66 DCDLQEDA---------CYNCGRGGHIAKDCKE-PKREREQC--CYNCGKPGHLARDCDH 113
C + D C+ CG GH+++ C + PK C CG HL +DC
Sbjct: 169 KCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Query: 114 ADEQK 118
+ +
Sbjct: 229 SQNSE 233
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 26/96 (27%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
M + C++CG + H +C G F F C+ CGE
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALG-------------EFPFAK------CFVCGEM 192
Query: 61 GHLAKDC-----DLQED--ACYNCGRGGHIAKDCKE 89
GHL++ C L D C CG H+ KDC E
Sbjct: 193 GHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
>gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens]
Length = 403
Score = 54.3 bits (129), Expect = 5e-08
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
C+ CG H+ CT+ +C+RCGE GH++ C K + C CG+ GH +C
Sbjct: 335 CFKCGSRTHMSGSCTQDRCFRCGEEGHLSPYCRK--GIVCNLCGKRGHAFAQC 385
Score = 51.6 bits (122), Expect = 4e-07
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 12/108 (11%)
Query: 11 RSGHWARE--CPTGGGRGRGMRSRGRGGFT--SDRGFQFVSSSLPDICYRCGESGHLAKD 66
R G W E C +G G G F ++RG+ + P C++CG H++
Sbjct: 289 RFGIWTGEYKCEIELRQGEGGVRHLPGAFFLGAERGYSWYKGQ-PKTCFKCGSRTHMSGS 347
Query: 67 CDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHA 114
C +D C+ CG GH++ C+ + C CGK GH C A
Sbjct: 348 CT--QDRCFRCGEEGHLSPYCR-----KGIVCNLCGKRGHAFAQCPKA 388
Score = 51.2 bits (121), Expect = 5e-07
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK-VKCYRCGETGHVAINCSKT--S 154
C+ CG H++ C + +C+ CGE GH+ C K + C CG+ GH C K +
Sbjct: 335 CFKCGSRTHMSGSCT---QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHN 391
Query: 155 EVNCYRCGESGH 166
V G +GH
Sbjct: 392 SVAAQLTGVAGH 403
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 31/82 (37%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
CFKCG H + C T DR C+RCGE GHL+
Sbjct: 335 CFKCGSRTHMSGSC------------------TQDR------------CFRCGEEGHLSP 364
Query: 66 DCDLQEDACYNCGRGGHIAKDC 87
C + C CG+ GH C
Sbjct: 365 YC-RKGIVCNLCGKRGHAFAQC 385
>gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Homo
sapiens]
Length = 1644
Score = 46.2 bits (108), Expect = 1e-05
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKR--EREQCCYNCGKPG--HLAR 109
C CG+ GH KDC ++ + + KD +E K E E+ + P H R
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSLLFRLKK-----KDSEEEKEGNEEEKDSRDVLDPRDLHDTR 1349
Query: 110 DCDHADEQKCYSCGEFGHIQKDCTKVKCYR 139
D + +C+ CG+ GH++++C +VK R
Sbjct: 1350 DFRDPRDLRCFICGDAGHVRRECPEVKLAR 1379
Score = 38.1 bits (87), Expect = 0.004
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 20/89 (22%)
Query: 95 EQCCYNCGKPGHLARDCDH------------ADEQKCYSCGEFGHIQKDCTKVKCYRCGE 142
++CC CGK GH +DC ++E+K E +KD V R
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEK-----EGNEEEKDSRDVLDPR--- 1343
Query: 143 TGHVAINCSKTSEVNCYRCGESGHLAREC 171
H + ++ C+ CG++GH+ REC
Sbjct: 1344 DLHDTRDFRDPRDLRCFICGDAGHVRREC 1372
Score = 33.9 bits (76), Expect = 0.076
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
C CG+ GH+ ++CP + R + + G + S + R H +
Sbjct: 1295 CRVCGKIGHYMKDCPKR--KSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTR 1349
Query: 66 DC-DLQEDACYNCGRGGHIAKDCKEPKREREQ 96
D D ++ C+ CG GH+ ++C E K R++
Sbjct: 1350 DFRDPRDLRCFICGDAGHVRRECPEVKLARQR 1381
>gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Homo
sapiens]
Length = 1640
Score = 43.5 bits (101), Expect = 1e-04
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 74 CYNCGRGGHIAKDCKEPKR-------------EREQCCYNCGKPG--HLARDCDHADEQK 118
C CG+ GH KDC + KR E E+ + P H RD + +
Sbjct: 1295 CRVCGKIGHYMKDCPKRKRLKKKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLR 1354
Query: 119 CYSCGEFGHIQKDCTKVKCYR 139
C+ CG+ GH++++C +VK R
Sbjct: 1355 CFICGDAGHVRRECPEVKLAR 1375
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 95 EQCCYNCGKPGHLARDCDH--------ADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHV 146
++CC CGK GH +DC ++E+K E +KD V R H
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKRLKKKDSEEEK-----EGNEEEKDSRDVLDPR---DLHD 1343
Query: 147 AINCSKTSEVNCYRCGESGHLAREC 171
+ ++ C+ CG++GH+ REC
Sbjct: 1344 TRDFRDPRDLRCFICGDAGHVRREC 1368
Score = 34.7 bits (78), Expect = 0.044
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
C CG+ GH+ ++CP + R + + G + S + R H +
Sbjct: 1295 CRVCGKIGHYMKDCP------KRKRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTR 1345
Query: 66 DC-DLQEDACYNCGRGGHIAKDCKEPKREREQ 96
D D ++ C+ CG GH+ ++C E K R++
Sbjct: 1346 DFRDPRDLRCFICGDAGHVRRECPEVKLARQR 1377
>gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens]
Length = 674
Score = 43.1 bits (100), Expect = 1e-04
Identities = 40/147 (27%), Positives = 56/147 (38%), Gaps = 36/147 (24%)
Query: 55 YRCGESG-------HLAKDCDLQED----ACYNCG----RGGHIAKDCKEPKREREQCCY 99
Y+C E G HLA+ D+ +C CG R H+ + E+ C
Sbjct: 507 YKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCN 566
Query: 100 NCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGH 145
CGK HLAR + +K +SC E G + +K T K Y+C E
Sbjct: 567 ECGKVFSRNSHLARHRNIHTGEKPHSCNECGKVFSRNSHLARHRKIHTGEKLYKCNECSK 626
Query: 146 VAINCSKTSE-------VNCYRCGESG 165
V S+ ++ V Y C E G
Sbjct: 627 VFSRNSRLAQHRNIHTGVKPYSCNECG 653
Score = 37.7 bits (86), Expect = 0.005
Identities = 33/128 (25%), Positives = 46/128 (35%), Gaps = 21/128 (16%)
Query: 55 YRCGESGHLAKDC-DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
Y+C E G + C DL + G + DC + R + Y+C H
Sbjct: 423 YKCNECGKAFRTCSDLTAHLLIHTGEKPYECIDCGKVFRHKSSLTYHCRI---------H 473
Query: 114 ADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGE 163
E K Y C E G + +K T K Y+C E G V S ++ GE
Sbjct: 474 TGE-KPYKCNECGKVFSQNSNLQRHRKIHTGEKLYKCNECGKVFRQNSHLAQHRDIHTGE 532
Query: 164 SGHLAREC 171
+ EC
Sbjct: 533 KPYSCNEC 540
Score = 37.7 bits (86), Expect = 0.005
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 51 PDICYRCGE----SGHLAKDCDLQED----ACYNCG----RGGHIAKDCKEPKREREQCC 98
P C CG+ + HL + ++ +C CG R H+A+ E+ C
Sbjct: 534 PYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSC 593
Query: 99 YNCGKP----GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS 154
CGK HLAR +K Y C E + +++ +R TG +C++
Sbjct: 594 NECGKVFSRNSHLARHRKIHTGEKLYKCNECSKVFSRNSRLAQHRNIHTGVKPYSCNECG 653
Query: 155 EVNCYRCGESGHLARECTI 173
+V ++ L + C+I
Sbjct: 654 KV----FSKNSILVQHCSI 668
Score = 37.0 bits (84), Expect = 0.009
Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 74 CYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 125
C CG+ ++ + K E+ C CGK HLA+ D +K YSC E
Sbjct: 481 CNECGKVFSQNSNLQRHRKIHTGEKLYKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNEC 540
Query: 126 GHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
G + + T K Y C E G V S + GE H EC
Sbjct: 541 GKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSCNEC 596
Score = 31.6 bits (70), Expect = 0.38
Identities = 34/135 (25%), Positives = 48/135 (35%), Gaps = 26/135 (19%)
Query: 55 YRCGESGHLAKDCD-LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
Y+C E G C L + G + K+C + R + H
Sbjct: 311 YKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKECGKVFRHKSSLT---------THQTVH 361
Query: 114 ADEQ--KCYSCGE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSE-------VN 157
E+ KC CG+ F I +K T K Y+C E G V I S+ +
Sbjct: 362 TGERPYKCNECGKGFSRIAFLARHRKVHTGEKPYKCNECGKVFIGNSRLARHRKIHTGGR 421
Query: 158 CYRCGESGHLARECT 172
Y+C E G R C+
Sbjct: 422 RYKCNECGKAFRTCS 436
Score = 28.1 bits (61), Expect = 4.2
Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 11/96 (11%)
Query: 74 CYNCGR----GGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 129
C CG+ +A+ K R C CGK R C GE +
Sbjct: 397 CNECGKVFIGNSRLARHRKIHTGGRRYKCNECGK---AFRTCSDLTAHLLIHTGEKPYEC 453
Query: 130 KDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESG 165
DC KV ++ T H I+ + Y+C E G
Sbjct: 454 IDCGKVFRHKSSLTYHCRIHTGEKP----YKCNECG 485
Score = 26.9 bits (58), Expect = 9.3
Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 74 CYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 125
C +CG + A+ + E+ CGK HLA+ QK Y+ E
Sbjct: 229 CSDCGEIFSSNSNFAQHQRIHTGEKPYKYNECGKVFNQNSHLAQHQKIHTGQKPYNNKEC 288
Query: 126 GHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
G + +K T K Y+C E G CS + GE + +EC
Sbjct: 289 GKVFSHHAYLAQHRKIHTGEKPYKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKEC 344
>gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens]
Length = 661
Score = 43.1 bits (100), Expect = 1e-04
Identities = 40/147 (27%), Positives = 56/147 (38%), Gaps = 36/147 (24%)
Query: 55 YRCGESG-------HLAKDCDLQED----ACYNCG----RGGHIAKDCKEPKREREQCCY 99
Y+C E G HLA+ D+ +C CG R H+ + E+ C
Sbjct: 494 YKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCN 553
Query: 100 NCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGH 145
CGK HLAR + +K +SC E G + +K T K Y+C E
Sbjct: 554 ECGKVFSRNSHLARHRNIHTGEKPHSCNECGKVFSRNSHLARHRKIHTGEKLYKCNECSK 613
Query: 146 VAINCSKTSE-------VNCYRCGESG 165
V S+ ++ V Y C E G
Sbjct: 614 VFSRNSRLAQHRNIHTGVKPYSCNECG 640
Score = 37.7 bits (86), Expect = 0.005
Identities = 33/128 (25%), Positives = 46/128 (35%), Gaps = 21/128 (16%)
Query: 55 YRCGESGHLAKDC-DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
Y+C E G + C DL + G + DC + R + Y+C H
Sbjct: 410 YKCNECGKAFRTCSDLTAHLLIHTGEKPYECIDCGKVFRHKSSLTYHCRI---------H 460
Query: 114 ADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGE 163
E K Y C E G + +K T K Y+C E G V S ++ GE
Sbjct: 461 TGE-KPYKCNECGKVFSQNSNLQRHRKIHTGEKLYKCNECGKVFRQNSHLAQHRDIHTGE 519
Query: 164 SGHLAREC 171
+ EC
Sbjct: 520 KPYSCNEC 527
Score = 37.7 bits (86), Expect = 0.005
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 51 PDICYRCGE----SGHLAKDCDLQED----ACYNCG----RGGHIAKDCKEPKREREQCC 98
P C CG+ + HL + ++ +C CG R H+A+ E+ C
Sbjct: 521 PYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSC 580
Query: 99 YNCGKP----GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS 154
CGK HLAR +K Y C E + +++ +R TG +C++
Sbjct: 581 NECGKVFSRNSHLARHRKIHTGEKLYKCNECSKVFSRNSRLAQHRNIHTGVKPYSCNECG 640
Query: 155 EVNCYRCGESGHLARECTI 173
+V ++ L + C+I
Sbjct: 641 KV----FSKNSILVQHCSI 655
Score = 37.0 bits (84), Expect = 0.009
Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 74 CYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 125
C CG+ ++ + K E+ C CGK HLA+ D +K YSC E
Sbjct: 468 CNECGKVFSQNSNLQRHRKIHTGEKLYKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNEC 527
Query: 126 GHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
G + + T K Y C E G V S + GE H EC
Sbjct: 528 GKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSCNEC 583
Score = 31.6 bits (70), Expect = 0.38
Identities = 34/135 (25%), Positives = 48/135 (35%), Gaps = 26/135 (19%)
Query: 55 YRCGESGHLAKDCD-LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
Y+C E G C L + G + K+C + R + H
Sbjct: 298 YKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKECGKVFRHKSSLT---------THQTVH 348
Query: 114 ADEQ--KCYSCGE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSE-------VN 157
E+ KC CG+ F I +K T K Y+C E G V I S+ +
Sbjct: 349 TGERPYKCNECGKGFSRIAFLARHRKVHTGEKPYKCNECGKVFIGNSRLARHRKIHTGGR 408
Query: 158 CYRCGESGHLARECT 172
Y+C E G R C+
Sbjct: 409 RYKCNECGKAFRTCS 423
Score = 28.1 bits (61), Expect = 4.2
Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 11/96 (11%)
Query: 74 CYNCGR----GGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 129
C CG+ +A+ K R C CGK R C GE +
Sbjct: 384 CNECGKVFIGNSRLARHRKIHTGGRRYKCNECGK---AFRTCSDLTAHLLIHTGEKPYEC 440
Query: 130 KDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESG 165
DC KV ++ T H I+ + Y+C E G
Sbjct: 441 IDCGKVFRHKSSLTYHCRIHTGEKP----YKCNECG 472
Score = 26.9 bits (58), Expect = 9.3
Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 74 CYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 125
C +CG + A+ + E+ CGK HLA+ QK Y+ E
Sbjct: 216 CSDCGEIFSSNSNFAQHQRIHTGEKPYKYNECGKVFNQNSHLAQHQKIHTGQKPYNNKEC 275
Query: 126 GHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
G + +K T K Y+C E G CS + GE + +EC
Sbjct: 276 GKVFSHHAYLAQHRKIHTGEKPYKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKEC 331
>gi|190610025 zinc finger protein 93 homolog [Homo sapiens]
Length = 738
Score = 42.7 bits (99), Expect = 2e-04
Identities = 43/192 (22%), Positives = 68/192 (35%), Gaps = 45/192 (23%)
Query: 8 KCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES------- 60
+ G+ +W EC G + +++ R + P C+ CG+S
Sbjct: 313 RTGKKRYWCHECGKGFSQSSNLQTHQR----------VHTGEKPYTCHECGKSFNQSSHL 362
Query: 61 -GHLAKDCDLQEDACYNCGRGGHIAKD----CKEPKREREQCCYNCGKPGHLARDCDHAD 115
HL + C +CG+G + D C+ E+ C CGK G R A
Sbjct: 363 YAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGK-GFTQRSHLQAH 421
Query: 116 E-----QKCYSCGEFG-------------HIQKDCTKVKCYRCGETGHVAINCSKTSEVN 157
E +K Y CG+ G + + KC CG+ ++ N V+
Sbjct: 422 ERIHTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVH 481
Query: 158 C----YRCGESG 165
Y+C E G
Sbjct: 482 TGEKPYKCEECG 493
>gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Homo
sapiens]
Length = 1645
Score = 42.7 bits (99), Expect = 2e-04
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPK--REREQCCYNCGKPG--HLAR 109
C CG+ GH KDC ++ + + KD +E K E E+ + P H R
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSSLLFRLK----KKDSEEEKEGNEEEKDSRDVLDPRDLHDTR 1350
Query: 110 DCDHADEQKCYSCGEFGHIQKDCTKVKCYR 139
D + +C+ CG+ GH++++C +VK R
Sbjct: 1351 DFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
Score = 37.7 bits (86), Expect = 0.005
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 95 EQCCYNCGKPGHLARDCDHADEQKCYSCG--------EFGHIQKDCTKVKCYRCGETGHV 146
++CC CGK GH +DC + E +KD V R H
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKSSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHD 1348
Query: 147 AINCSKTSEVNCYRCGESGHLAREC 171
+ ++ C+ CG++GH+ REC
Sbjct: 1349 TRDFRDPRDLRCFICGDAGHVRREC 1373
Score = 32.7 bits (73), Expect = 0.17
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
C CG+ GH+ ++CP R + + G + S + R H +
Sbjct: 1295 CRVCGKIGHYMKDCPKRKS-SLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTR 1350
Query: 66 DC-DLQEDACYNCGRGGHIAKDCKEPKREREQ 96
D D ++ C+ CG GH+ ++C E K R++
Sbjct: 1351 DFRDPRDLRCFICGDAGHVRRECPEVKLARQR 1382
>gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 25/110 (22%)
Query: 74 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 129
C CG+ + + + KR E+ C CGK + C H E K GE
Sbjct: 478 CDECGKAFNQCSNLTKHKRIHTGEKPYKCEECGKAFNR---CSHLTEHKRIHTGE----- 529
Query: 130 KDCTKVKCYRCGETGHVAINCSKTS-------EVNCYRCGESGHLARECT 172
K Y+C E G V I+CS S CY+ E G C+
Sbjct: 530 ------KPYKCEECGKVFISCSSLSNHKRIHTREKCYKSEECGKTFNHCS 573
Score = 33.9 bits (76), Expect = 0.076
Identities = 33/146 (22%), Positives = 49/146 (33%), Gaps = 29/146 (19%)
Query: 55 YRCGESGHLAKDCDL--------QEDACYNCGRGGHIAKDCKEPKR-------EREQCCY 99
Y+C + G + C E+ Y C G + K E+ C
Sbjct: 364 YKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKECGKVFKSFTSLSNHIIIHTGEKLYKCE 423
Query: 100 NCGKP-GHLARDCDHAD------EQKCYSCGE----FGHI---QKDCTKVKCYRCGETGH 145
CGK H + H KC CG+ F ++ ++ T K Y+C E G
Sbjct: 424 ECGKAFNHSSNHAKHKKIHTGQKPHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDECGK 483
Query: 146 VAINCSKTSEVNCYRCGESGHLAREC 171
CS ++ GE + EC
Sbjct: 484 AFNQCSNLTKHKRIHTGEKPYKCEEC 509
Score = 32.7 bits (73), Expect = 0.17
Identities = 35/144 (24%), Positives = 50/144 (34%), Gaps = 26/144 (18%)
Query: 54 CYRCGE--------SGHLAKDCDLQEDACYNCGRG-GHIAKDCKEPK---REREQCCYNC 101
C CG+ S H+ + C CG+ H + K K ++ C C
Sbjct: 394 CKECGKVFKSFTSLSNHIIIHTGEKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
Query: 102 GKPGH-----LARDCDHADEQ--KCYSCGEFGHIQKDCTK-------VKCYRCGETGHVA 147
GK + H E+ KC CG+ + + TK K Y+C E G
Sbjct: 454 GKAFNWFSYLTLHKRIHTGEKPYKCDECGKAFNQCSNLTKHKRIHTGEKPYKCEECGKAF 513
Query: 148 INCSKTSEVNCYRCGESGHLAREC 171
CS +E GE + EC
Sbjct: 514 NRCSHLTEHKRIHTGEKPYKCEEC 537
>gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 25/110 (22%)
Query: 74 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 129
C CG+ + + + KR E+ C CGK + C H E K GE
Sbjct: 478 CDECGKAFNQCSNLTKHKRIHTGEKPYKCEECGKAFNR---CSHLTEHKRIHTGE----- 529
Query: 130 KDCTKVKCYRCGETGHVAINCSKTS-------EVNCYRCGESGHLARECT 172
K Y+C E G V I+CS S CY+ E G C+
Sbjct: 530 ------KPYKCEECGKVFISCSSLSNHKRIHTREKCYKSEECGKTFNHCS 573
Score = 33.1 bits (74), Expect = 0.13
Identities = 35/144 (24%), Positives = 50/144 (34%), Gaps = 26/144 (18%)
Query: 54 CYRCGE--------SGHLAKDCDLQEDACYNCGRG-GHIAKDCKEPK---REREQCCYNC 101
C CG+ S H+ + C CG+ H + K K ++ C C
Sbjct: 394 CKECGKVFKSFTSLSNHIIIHTGKKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
Query: 102 GKPGH-----LARDCDHADEQ--KCYSCGEFGHIQKDCTK-------VKCYRCGETGHVA 147
GK + H E+ KC CG+ + + TK K Y+C E G
Sbjct: 454 GKAFNWFSYLTLHKRIHTGEKPYKCDECGKAFNQCSNLTKHKRIHTGEKPYKCEECGKAF 513
Query: 148 INCSKTSEVNCYRCGESGHLAREC 171
CS +E GE + EC
Sbjct: 514 NRCSHLTEHKRIHTGEKPYKCEEC 537
Score = 32.3 bits (72), Expect = 0.22
Identities = 32/146 (21%), Positives = 49/146 (33%), Gaps = 29/146 (19%)
Query: 55 YRCGESGHLAKDCDL--------QEDACYNCGRGGHIAKDCKEPKR-------EREQCCY 99
Y+C + G + C E+ Y C G + K ++ C
Sbjct: 364 YKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKECGKVFKSFTSLSNHIIIHTGKKLYKCE 423
Query: 100 NCGKP-GHLARDCDHAD------EQKCYSCGE----FGHI---QKDCTKVKCYRCGETGH 145
CGK H + H KC CG+ F ++ ++ T K Y+C E G
Sbjct: 424 ECGKAFNHSSNHAKHKKIHTGQKPHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDECGK 483
Query: 146 VAINCSKTSEVNCYRCGESGHLAREC 171
CS ++ GE + EC
Sbjct: 484 AFNQCSNLTKHKRIHTGEKPYKCEEC 509
>gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 39.3 bits (90), Expect = 0.002
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 25/110 (22%)
Query: 74 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 129
C CG+ + + + KR E+ C CGK + C H E K GE
Sbjct: 478 CDECGKAFNQCSNLTKHKRIHTGEKPYKCEECGKAFNR---CSHLTEHKRIHTGE----- 529
Query: 130 KDCTKVKCYRCGETGHVAINCSKTS-------EVNCYRCGESGHLARECT 172
K Y+C E G V I+CS S CY+ E G C+
Sbjct: 530 ------KPYKCEECGKVFISCSSLSNHKRIHTREKCYKSEECGKTFNHCS 573
Score = 33.1 bits (74), Expect = 0.13
Identities = 35/144 (24%), Positives = 50/144 (34%), Gaps = 26/144 (18%)
Query: 54 CYRCGE--------SGHLAKDCDLQEDACYNCGRG-GHIAKDCKEPK---REREQCCYNC 101
C CG+ S H+ + C CG+ H + K K ++ C C
Sbjct: 394 CKECGKVFKSFTSLSNHIIIHTGKKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
Query: 102 GKPGH-----LARDCDHADEQ--KCYSCGEFGHIQKDCTK-------VKCYRCGETGHVA 147
GK + H E+ KC CG+ + + TK K Y+C E G
Sbjct: 454 GKAFNWFSYLTLHKRIHTGEKPYKCDECGKAFNQCSNLTKHKRIHTGEKPYKCEECGKAF 513
Query: 148 INCSKTSEVNCYRCGESGHLAREC 171
CS +E GE + EC
Sbjct: 514 NRCSHLTEHKRIHTGEKPYKCEEC 537
Score = 32.3 bits (72), Expect = 0.22
Identities = 32/146 (21%), Positives = 49/146 (33%), Gaps = 29/146 (19%)
Query: 55 YRCGESGHLAKDCDL--------QEDACYNCGRGGHIAKDCKEPKR-------EREQCCY 99
Y+C + G + C E+ Y C G + K ++ C
Sbjct: 364 YKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKECGKVFKSFTSLSNHIIIHTGKKLYKCE 423
Query: 100 NCGKP-GHLARDCDHAD------EQKCYSCGE----FGHI---QKDCTKVKCYRCGETGH 145
CGK H + H KC CG+ F ++ ++ T K Y+C E G
Sbjct: 424 ECGKAFNHSSNHAKHKKIHTGQKPHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDECGK 483
Query: 146 VAINCSKTSEVNCYRCGESGHLAREC 171
CS ++ GE + EC
Sbjct: 484 AFNQCSNLTKHKRIHTGEKPYKCEEC 509
>gi|189571667 zinc finger protein 696 [Homo sapiens]
Length = 374
Score = 39.3 bits (90), Expect = 0.002
Identities = 47/194 (24%), Positives = 65/194 (33%), Gaps = 40/194 (20%)
Query: 16 ARECPTGGGRG--RGMRSRGRGGFTSD----------RGFQFVSSSLPDICYRCGESGHL 63
ARE P G RG ++ G+ G SD G + P C CG S
Sbjct: 79 ARERPGGSPRGPVTSEKTGGQSGLESDVPPNAGPGAEGGGSWKGRPFP--CGACGRSFKC 136
Query: 64 AKDCDLQEDA--------CYNCGRG----GHIAKDCKEPKREREQCCYNCGKP-----GH 106
+ D C +CG+ H+ + + ER C CGK
Sbjct: 137 SSDAAKHRSIHSGEKPYECSDCGKAFIHSSHVVRHQRAHSGERPYACAECGKAFGQSFNL 196
Query: 107 LARDCDHADEQK--CYSCGEFGHIQKDCTK-------VKCYRCGETGHVAINCSKTSEVN 157
L H E+ C CG+ + D K + Y CGE G ++ S
Sbjct: 197 LRHQRVHTGEKPYACADCGKAFGQRSDAAKHRRTHTGERLYACGECGKRFLHSSNVVRHR 256
Query: 158 CYRCGESGHLAREC 171
GE+ + REC
Sbjct: 257 RTHHGENPYECREC 270
>gi|51972214 lin-28 homolog B [Homo sapiens]
Length = 250
Score = 38.9 bits (89), Expect = 0.002
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 72 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
D CYNCG H AK+C P + ++ C+ C H+ +C H
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKK--CHYCQSIMHMVANCPH 166
Score = 35.0 bits (79), Expect = 0.034
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 88 KEPKREREQCCYNCGKPGHLARDCDHADE-QKCYSCGEFGHIQKDC 132
++PK +R CYNCG H A++C + +KC+ C H+ +C
Sbjct: 122 RKPKGDR---CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
Score = 34.3 bits (77), Expect = 0.058
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 52 DICYRCGESGHLAKDCDL--QEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 109
D CY CG H AK+C L Q C+ C H+ +C N +P ++
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHK---------NVAQPPASSQ 177
Query: 110 DCDHADEQKCYS 121
A+ Q C S
Sbjct: 178 GRQEAESQPCTS 189
Score = 33.1 bits (74), Expect = 0.13
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 118 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
+CY+CG H K+C+ KC+ C H+ NC
Sbjct: 128 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
Score = 28.1 bits (61), Expect = 4.2
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 136 KCYRCGETGHVAINCSKTSE-VNCYRCGESGHLAREC 171
+CY CG H A CS + C+ C H+ C
Sbjct: 128 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>gi|224177533 zinc finger protein LOC400713 [Homo sapiens]
Length = 577
Score = 38.9 bits (89), Expect = 0.002
Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 33/155 (21%)
Query: 51 PDICYRCG----ESGHLAKDCDLQEDA----CYNCG----RGGHIAKDCKEPKREREQCC 98
P C+ CG ++ HLA + C CG R H+A+ K E+ C
Sbjct: 267 PYKCHECGKVFTQNSHLANHHRIHTGEKPYKCNECGKVFNRNAHLARHQKIHSGEKPYKC 326
Query: 99 YNCGKP-----GHLARDCDHADEQ--KCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCS 151
CGK G A H E+ KC CG+ + T+ + GE + C
Sbjct: 327 KECGKAFSGGSGLTAHLVIHTGEKLYKCNKCGKVFNRNAHLTRHQRIHTGEKPYECKECG 386
Query: 152 KT--------------SEVNCYRCGESGHLARECT 172
K + Y+C E G R+C+
Sbjct: 387 KVFRHKFCLTNHHRMHTGEQPYKCNECGKAFRDCS 421
Score = 36.2 bits (82), Expect = 0.015
Identities = 34/138 (24%), Positives = 50/138 (36%), Gaps = 20/138 (14%)
Query: 47 SSSLPDICYRCGES--------GHLAKDCDLQEDACYNCG----RGGHIAKDCKEPKRER 94
S P C CG++ HL + C CG R H+ + + E+
Sbjct: 319 SGEKPYKCKECGKAFSGGSGLTAHLVIHTGEKLYKCNKCGKVFNRNAHLTRHQRIHTGEK 378
Query: 95 EQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAI 148
C CGK + C H EQ Y C E G +DC+ + + TG
Sbjct: 379 PYECKECGKVFR-HKFCLTNHHRMHTGEQP-YKCNECGKAFRDCSGLTAHLLIHTGEKPY 436
Query: 149 NCSKTSEVNCYRCGESGH 166
C + ++V +R S H
Sbjct: 437 KCKECAKVFRHRLSLSNH 454
Score = 35.0 bits (79), Expect = 0.034
Identities = 37/146 (25%), Positives = 51/146 (34%), Gaps = 29/146 (19%)
Query: 55 YRCGESG-------HLAKDCDLQEDA----CYNCGR----GGHIAKDCKEPKREREQCCY 99
Y+C E G HLA+ + C CG+ G + E+ C
Sbjct: 296 YKCNECGKVFNRNAHLARHQKIHSGEKPYKCKECGKAFSGGSGLTAHLVIHTGEKLYKCN 355
Query: 100 NCGKP----GHLARDCDHADEQKCYSCGEFGHI--QKDC--------TKVKCYRCGETGH 145
CGK HL R +K Y C E G + K C T + Y+C E G
Sbjct: 356 KCGKVFNRNAHLTRHQRIHTGEKPYECKECGKVFRHKFCLTNHHRMHTGEQPYKCNECGK 415
Query: 146 VAINCSKTSEVNCYRCGESGHLAREC 171
+CS + GE + +EC
Sbjct: 416 AFRDCSGLTAHLLIHTGEKPYKCKEC 441
Score = 28.9 bits (63), Expect = 2.4
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 18/89 (20%)
Query: 74 CYNCG----RGGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 125
C CG R ++A + E+ C C K HLAR +K Y C E
Sbjct: 466 CDECGKDFTRNSNLANHHRIHTGEKPYKCSECHKVFSHNSHLARHRQIHTGEKSYKCNEC 525
Query: 126 GHI----------QKDCTKVKCYRCGETG 144
G + ++ T K YRC E G
Sbjct: 526 GKVFSHKLYLKKHERIHTGEKPYRCHECG 554
Score = 27.3 bits (59), Expect = 7.1
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 118 KCYSCGE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 170
KC+ CG+ F I Q+ T K Y+C E G V S + + GE + E
Sbjct: 241 KCHECGKLFNRISLLARHQRIHTGEKPYKCHECGKVFTQNSHLANHHRIHTGEKPYKCNE 300
Query: 171 C 171
C
Sbjct: 301 C 301
>gi|13375938 lin-28 homolog [Homo sapiens]
Length = 209
Score = 38.5 bits (88), Expect = 0.003
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 72 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
D CYNCG H AK+CK P + ++ C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKK--CHFCQSISHMVASC 174
Score = 35.0 bits (79), Expect = 0.034
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 89 EPKREREQCCYNCGKPGHLARDCDHADE-QKCYSCGEFGHIQKDC 132
+ +R + CYNCG H A++C + +KC+ C H+ C
Sbjct: 130 QKRRSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
Score = 32.7 bits (73), Expect = 0.17
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 52 DICYRCGESGHLAKDCDL--QEDACYNCGRGGHIAKDC 87
D CY CG H AK+C L Q C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
Score = 29.6 bits (65), Expect = 1.4
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 136 KCYRCGETGHVAINCSKTSE-VNCYRCGESGHLARECTIEA 175
+CY CG H A C + C+ C H+ C ++A
Sbjct: 138 RCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCPLKA 178
>gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens]
Length = 1495
Score = 38.1 bits (87), Expect = 0.004
Identities = 38/125 (30%), Positives = 47/125 (37%), Gaps = 43/125 (34%)
Query: 54 CYRCGESGHLAKDCDL---------QEDACYNCGRGGHIAKDCKEPKR------ERE--- 95
C CG+ GH KDC + QEDA N + K KE K ERE
Sbjct: 1347 CRICGKIGHFMKDCPMRRKVRRRRDQEDAL-NQRYPENKEKRSKEDKEIHNKYTEREVST 1405
Query: 96 ------QCCYNCGKPGHLARDC----------------DHAD--EQKCYSCGEFGHIQKD 131
QC KP A D D D E++C+ CG GHI+K+
Sbjct: 1406 KEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKE 1465
Query: 132 CTKVK 136
C + K
Sbjct: 1466 CPQFK 1470
Score = 31.6 bits (70), Expect = 0.38
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSR 32
+ CF CGR GH +ECP G + S+
Sbjct: 1448 LREKRCFICGREGHIKKECPQFKGSSGSLSSK 1479
Score = 29.3 bits (64), Expect = 1.9
Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 22/120 (18%)
Query: 74 CYNCGRGGHIAKDC---KEPKREREQ-------CCYNCGKPGHLARDCDHADEQKCYSCG 123
C CG+ GH KDC ++ +R R+Q N K ++ + ++ S
Sbjct: 1347 CRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTEREVSTK 1406
Query: 124 EFGHIQKDCTKVKCYRCG-ETGHVAI-----------NCSKTSEVNCYRCGESGHLAREC 171
E IQ K K R + G I + E C+ CG GH+ +EC
Sbjct: 1407 EDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKEC 1466
Score = 28.9 bits (63), Expect = 2.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 95 EQCCYNCGKPGHLARDC 111
++CC CGK GH +DC
Sbjct: 1344 DRCCRICGKIGHFMKDC 1360
>gi|22749145 ring finger protein 217 [Homo sapiens]
Length = 275
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Query: 81 GHIAKDCKEPKREREQC-------CYNCGKPGHLARDCDH---ADEQKCYSCGEFGHIQK 130
GHI + + + QC C+ C P H +C D+ + E H Q+
Sbjct: 67 GHIPTPSRSESKYKIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQR 126
Query: 131 D---CTKVKCYRCGETGHVAINCSKTSEVNCYRCGE 163
+ C K K + G + CS+ + CYRCGE
Sbjct: 127 NAQKCPKCKIHIQRTEGCDHMTCSQCNTNFCYRCGE 162
>gi|147905620 PR domain containing 9 [Homo sapiens]
Length = 894
Score = 37.4 bits (85), Expect = 0.007
Identities = 37/147 (25%), Positives = 48/147 (32%), Gaps = 26/147 (17%)
Query: 51 PDICYRCGES--------GHLAKDCDLQEDACYNCGRG----GHIAKDCKEPKREREQCC 98
P +C CG H + C CGRG H+ + + E+ C
Sbjct: 691 PYVCRECGRGFSWQSVLLTHQRTHTGEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVC 750
Query: 99 YNCGK----PGHLARDCDHADEQKCYSCGEFGH----------IQKDCTKVKCYRCGETG 144
CG+ HL R +K Y C E G Q+ T K Y C E G
Sbjct: 751 RECGRGFRDKSHLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECG 810
Query: 145 HVAINCSKTSEVNCYRCGESGHLAREC 171
N S GE ++ REC
Sbjct: 811 RGFSNKSHLLRHQRTHTGEKPYVCREC 837
Score = 36.2 bits (82), Expect = 0.015
Identities = 53/206 (25%), Positives = 67/206 (32%), Gaps = 46/206 (22%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRS---RGRGGFTSDRGFQFVSSSL----------PD 52
C +CGR W T G + R G RGF + S L P
Sbjct: 666 CRECGRGFSWQSVLLTHQRTHTGEKPYVCRECG-----RGFSWQSVLLTHQRTHTGEKPY 720
Query: 53 ICYRCGES--------GHLAKDCDLQEDACYNCGRG----GHIAKDCKEPKREREQCCYN 100
+C CG H + C CGRG H+ + + E+ C
Sbjct: 721 VCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKPYVCRE 780
Query: 101 CG-----KPGHLARDCDHADEQKCYSCGEFG-------HI---QKDCTKVKCYRCGETGH 145
CG K L+ H E K Y C E G H+ Q+ T K Y C E G
Sbjct: 781 CGRGFRDKSNLLSHQRTHTGE-KPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGR 839
Query: 146 VAINCSKTSEVNCYRCGESGHLAREC 171
N S GE ++ REC
Sbjct: 840 GFRNKSHLLRHQRTHTGEKPYVCREC 865
Score = 29.3 bits (64), Expect = 1.9
Identities = 36/148 (24%), Positives = 46/148 (31%), Gaps = 28/148 (18%)
Query: 51 PDICYRCGES--------GHLAKDCDLQEDACYNCGRG----GHIAKDCKEPKREREQCC 98
P +C CG H + + C CGRG + + E+ C
Sbjct: 607 PYVCRECGRGFSRQSVLLTHQRRHTGEKPYVCRECGRGFSRQSVLLTHQRRHTGEKPYVC 666
Query: 99 YNCGKPGH-----LARDCDHADEQKCYSCGEFGH----------IQKDCTKVKCYRCGET 143
CG+ L H E K Y C E G Q+ T K Y C E
Sbjct: 667 RECGRGFSWQSVLLTHQRTHTGE-KPYVCRECGRGFSWQSVLLTHQRTHTGEKPYVCREC 725
Query: 144 GHVAINCSKTSEVNCYRCGESGHLAREC 171
G N S GE ++ REC
Sbjct: 726 GRGFSNKSHLLRHQRTHTGEKPYVCREC 753
>gi|122937213 zinc finger protein 99 [Homo sapiens]
Length = 1036
Score = 37.4 bits (85), Expect = 0.007
Identities = 33/142 (23%), Positives = 51/142 (35%), Gaps = 28/142 (19%)
Query: 58 GESGHLAKDCDLQEDA----------CYNCGRGGHIAKDCKEPK----REREQCCYNCGK 103
GE + ++C L++ C CG+ + + ++ K ++ C CGK
Sbjct: 722 GEKSYKCEECALRKHEIIHTGKKPYKCEECGKAFNNSSTLRKHKIIYTGKKPYKCEECGK 781
Query: 104 P----GHLARDCDHADEQKCYSCGEFGHIQKDC----------TKVKCYRCGETGHVAIN 149
HL R +K Y CGE G + T+ K Y+C E G N
Sbjct: 782 AFKQSSHLTRHKAVHTGEKPYKCGECGKAFNNSSTLKKHKLIHTREKSYKCEECGKAFSN 841
Query: 150 CSKTSEVNCYRCGESGHLAREC 171
S + GE + EC
Sbjct: 842 FSALRKHKIIHTGEKPYKCEEC 863
Score = 34.3 bits (77), Expect = 0.058
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 13/113 (11%)
Query: 74 CYNCGRGGHIAKDCKEPK----REREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 125
C CG+G + + K E+ C CGK HL + +K Y C E
Sbjct: 890 CEECGKGFNNFSTLMKHKIIHTGEKPYKCEECGKAFKQSSHLTKHKSIHTGEKPYKCEER 949
Query: 126 GHIQKDCTKVKCYRCGETGHVAINCSKTSE-VNCYRCG----ESGHLARECTI 173
G +++ +R TG C + + C CG +S HL + TI
Sbjct: 950 GKAFSHFSRLTKHRIIHTGKKPYKCEECEKPYKCEECGKAFNQSSHLTQHKTI 1002
Score = 29.6 bits (65), Expect = 1.4
Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 74 CYNCGRGGHIAKDCKEPK----REREQCCYNCGKP----GHLARD-CDHADEQ--KCYSC 122
C CG+ + + + K ++ C CGK HL R H E+ KC C
Sbjct: 448 CEECGKAFNNSSTLMKHKIIHTGKKPYKCEECGKAFKQSSHLTRHKAIHTGEKPYKCEEC 507
Query: 123 GE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
G+ F H Q T K Y+C E G S + GE + EC
Sbjct: 508 GKAFNHFSALRKHQIIHTGKKPYKCEECGKAFSQSSTLRKHEIIHTGEKPYKCEEC 563
Score = 29.3 bits (64), Expect = 1.9
Identities = 29/116 (25%), Positives = 41/116 (35%), Gaps = 18/116 (15%)
Query: 74 CYNCGRGGHIAKDCKEPK----REREQCCYNCGKP----GHLARDCDHADEQKCYSCGE- 124
C CG+ + ++ + E+ C CGK HL R E+K Y C E
Sbjct: 532 CEECGKAFSQSSTLRKHEIIHTGEKPYKCEECGKAFKWSSHLTRHKVIHTEEKPYKCEEC 591
Query: 125 ------FGHIQKD---CTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
F ++K T K Y+C E G S + GE + EC
Sbjct: 592 GKAFNHFSALRKHKIIHTGKKPYKCEECGKAFSQSSTLRKHEIIHTGEKPYKCEEC 647
Score = 28.1 bits (61), Expect = 4.2
Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 18/118 (15%)
Query: 74 CYNCGRGGHIAKDCKEPK----REREQCCYNCGKPGHLARDCD-----HADEQ--KCYSC 122
C CG+ + ++ + E+ C CGK + H E+ KC C
Sbjct: 616 CEECGKAFSQSSTLRKHEIIHTGEKPYKCEECGKAFKWSSKLTVHKVIHTAEKPCKCEEC 675
Query: 123 GE----FGHIQKDC---TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 173
G+ F ++K T K Y+C E G N S + GE + EC +
Sbjct: 676 GKAFKHFSALRKHKIIHTGKKPYKCEECGKAFNNSSTLRKHEIIHTGEKSYKCEECAL 733
Score = 26.9 bits (58), Expect = 9.3
Identities = 34/149 (22%), Positives = 49/149 (32%), Gaps = 28/149 (18%)
Query: 51 PDICYRCG----ESGHLAKDCDLQEDA----CYNCGRGGHIAKDCKEPK----REREQCC 98
P C CG +S HL + + C CG+ + + K+ K RE+ C
Sbjct: 773 PYKCEECGKAFKQSSHLTRHKAVHTGEKPYKCGECGKAFNNSSTLKKHKLIHTREKSYKC 832
Query: 99 YNCGKP---------------GHLARDCDHADEQKCYSCGEFGHIQKDC-TKVKCYRCGE 142
CGK G C+ + K ++ K T K Y+C E
Sbjct: 833 EECGKAFSNFSALRKHKIIHTGEKPYKCEECECGKAFNNSSTLMKHKIIHTGEKPYKCEE 892
Query: 143 TGHVAINCSKTSEVNCYRCGESGHLAREC 171
G N S + GE + EC
Sbjct: 893 CGKGFNNFSTLMKHKIIHTGEKPYKCEEC 921
>gi|169213834 PREDICTED: similar to hCG36734 [Homo sapiens]
Length = 560
Score = 36.6 bits (83), Expect = 0.012
Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 25/117 (21%)
Query: 74 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGK----PGHLARDCDHADEQKCYSCGEF 125
C CG+ ++ KR E+ C CGK P HLA +K Y C E
Sbjct: 316 CKECGKAFNVFSSLNNHKRIHTGEKPYKCEECGKAFNQPSHLATHKRIHTGEKLYKCEEC 375
Query: 126 GHIQKDCTKV-------------KCYRCGETGHVAINCSKTSEVNC----YRCGESG 165
G + + KC CG+ V+++ + ++ Y+C E G
Sbjct: 376 GKAFSQSSHITTHKRIHTGEKPYKCEECGKAFKVSVHLTTHKRIHTGEKPYKCEECG 432
Score = 32.0 bits (71), Expect = 0.29
Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 74 CYNCGRG----GHIAKDCKEPKREREQCCYNCGKPGHLARDCD-----HADEQ--KCYSC 122
C CG+ H+ K + R C CGK + + H E+ KC C
Sbjct: 204 CKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEEC 263
Query: 123 GEFGHIQKDCTKVKCYRCGETGHVAINCSKT----SEVNCYR---CGESGHLAREC 171
G+ ++ K GE + C KT S +N ++ GE + +EC
Sbjct: 264 GKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKCKEC 319
Score = 31.6 bits (70), Expect = 0.38
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 118 KCYSCGE----FGHIQK---DCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 170
KC CG+ H+ K + T+V CY+C E G SK + GE + E
Sbjct: 203 KCKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEE 262
Query: 171 C 171
C
Sbjct: 263 C 263
Score = 30.0 bits (66), Expect = 1.1
Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 26/147 (17%)
Query: 51 PDICYRCGESGHLAKDCDLQEDA--------CYNCGRGGHIAKDCKEPKR----EREQCC 98
P C CG++ +++ + + C CG+ ++ KR E+ C
Sbjct: 257 PYKCEECGKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKC 316
Query: 99 YNCGKPGHLARDCD-----HADEQ--KCYSCGEF----GHI---QKDCTKVKCYRCGETG 144
CGK ++ + H E+ KC CG+ H+ ++ T K Y+C E G
Sbjct: 317 KECGKAFNVFSSLNNHKRIHTGEKPYKCEECGKAFNQPSHLATHKRIHTGEKLYKCEECG 376
Query: 145 HVAINCSKTSEVNCYRCGESGHLAREC 171
S + GE + EC
Sbjct: 377 KAFSQSSHITTHKRIHTGEKPYKCEEC 403
Score = 28.5 bits (62), Expect = 3.2
Identities = 32/124 (25%), Positives = 46/124 (37%), Gaps = 27/124 (21%)
Query: 74 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKPGHLARDCD-----HADEQ--KCYSC 122
C CG+ ++ KR E+ C CGK + + H E+ KC C
Sbjct: 400 CEECGKAFKVSVHLTTHKRIHTGEKPYKCEECGKAFNQSSALTTHKIIHTGERPYKCKQC 459
Query: 123 GEFGHIQKDC--------TKVKCYRCGETG-----HVAINCSKT--SEVNCYRCGESGHL 167
G+ G Q TK K Y+C E G + +N K + Y+C E G
Sbjct: 460 GK-GFSQSSTLTKHKIIHTKEKPYKCEECGKAFNQYSTLNKHKIIHAREKPYKCEECGKA 518
Query: 168 AREC 171
+C
Sbjct: 519 FNKC 522
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.481
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,913,601
Number of Sequences: 37866
Number of extensions: 501635
Number of successful extensions: 4831
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 477
Number of HSP's that attempted gapping in prelim test: 2311
Number of HSP's gapped (non-prelim): 2144
length of query: 177
length of database: 18,247,518
effective HSP length: 95
effective length of query: 82
effective length of database: 14,650,248
effective search space: 1201320336
effective search space used: 1201320336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.