Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF534 Sequence: fasta or formatted (674aa) NCBI GI: 221139779
Description:

zinc finger protein 534 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [661aa] zinc finger protein 534 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         22           1
 C cysteine            6.1         41           1
 D aspartate           2.2         15           1
 E glutamate           6.5         44           2
 F phenylalanine       4.0         27           2
 G glycine             6.7         45           2
 H histidine           7.3         49           2
 I isoleucine          4.6         31           2
 K lysine              9.6         65           1
 L leucine             6.1         41           2
 M methionine          0.4          3           1
 N asparagine          6.5         44           2
 P proline             3.3         22           1
 Q glutamine           4.2         28           1
 R arginine            6.4         43           2
 S serine              8.8         59           3
 T threonine           4.9         33           2
 V valine              5.3         36           1
 W tryptophan          0.4          3           1
 Y tyrosine            3.4         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 534 isoform 2 
ZNF534                0.974   zinc finger protein 534 isoform 1 
ZNF528                0.581   zinc finger protein 528 
LOC400713             0.573   zinc finger protein LOC400713 
ZNF665                0.544   zinc finger protein 665 
ZNF160                0.533   zinc finger protein 160 
ZNF347                0.533   zinc finger protein 347 
ZNF160                0.533   zinc finger protein 160 
ZNF160                0.533   zinc finger protein 160 
ZNF836                0.507   zinc finger protein 836 
ZNF845                0.500   zinc finger protein 845 
ZNF616                0.499   zinc finger protein 616 
LOC388559             0.497   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.497   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.497   PREDICTED: hypothetical protein LOC388559 
ZNF761                0.496   zinc finger protein 761 
ZNF480                0.485   zinc finger protein 480 
ZNF184                0.475   zinc finger protein 184 
ZNF808                0.471   zinc finger protein 808 
ZNF420                0.468   zinc finger protein 420 
ZNF726                0.468   PREDICTED: zinc finger protein 726 
ZNF726                0.468   PREDICTED: zinc finger protein 726 
ZNF726                0.468   PREDICTED: zinc finger protein 726 
ZNF813                0.463   zinc finger protein 813 
ZNF841                0.463   zinc finger protein 841 
ZNF611                0.461   zinc finger protein 611 isoform a 
ZNF611                0.461   zinc finger protein 611 isoform a 
ZNF611                0.461   zinc finger protein 611 isoform a 
ZNF429                0.461   zinc finger protein 429 
ZNF91                 0.456   zinc finger protein 91 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press