LGI1 31008

Name: LGI1	Sequence: fasta or formatted (557aa)		NCBI GI: 4826816
Description: leucine-rich, glioma inactivated 1 precursor		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 25 1 C cysteine 2.3 13 1 D aspartate 5.6 31 2 E glutamate 4.5 25 1 F phenylalanine 6.6 37 1 G glycine 4.3 24 2 H histidine 2.2 12 1 I isoleucine 7.9 44 2 K lysine 7.2 40 2 L leucine 8.8 49 3 M methionine 1.1 6 1 N asparagine 6.1 34 3 P proline 4.1 23 2 Q glutamine 4.1 23 1 R arginine 3.9 22 1 S serine 9.0 50 4 T threonine 6.1 34 2 V valine 5.9 33 2 W tryptophan 1.6 9 1 Y tyrosine 4.1 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine-rich, glioma inactivated 1 precursor LGI2 0.545 leucine-rich repeat LGI family, member 2 LGI3 0.525 leucine-rich repeat LGI family, member 3 LGI4 0.445 leucine-rich repeat LGI family, member 4 SLIT3 0.066 slit homolog 3 SLIT1 0.064 slit homolog 1 SLIT2 0.063 slit homolog 2 PXDNL 0.062 peroxidasin homolog-like PXDN 0.056 peroxidasin CPN2 0.056 carboxypeptidase N, polypeptide 2, 83kD SLITRK6 0.055 slit and trk like 6 LRRC4 0.055 leucine rich repeat containing 4 LRIG1 0.052 leucine-rich repeats and immunoglobulin-like domains... GPR125 0.052 G protein-coupled receptor 125 LRIG2 0.052 leucine-rich repeats and immunoglobulin-like domains ... LRRC4C 0.052 netrin-G1 ligand VASN 0.052 slit-like 2 FLRT3 0.051 fibronectin leucine rich transmembrane protein 3 pre... FLRT3 0.051 fibronectin leucine rich transmembrane protein 3 prec... SLITRK2 0.051 SLIT and NTRK-like family, member 2 SLITRK2 0.051 SLIT and NTRK-like family, member 2 SLITRK2 0.051 SLIT and NTRK-like family, member 2 SLITRK2 0.051 SLIT and NTRK-like family, member 2 SLITRK2 0.051 SLIT and NTRK-like family, member 2 SLITRK2 0.051 SLIT and NTRK-like family, member 2 SLITRK2 0.051 SLIT and NTRK-like family, member 2 SLITRK2 0.051 SLIT and NTRK-like family, member 2 SLITRK2 0.051 SLIT and NTRK-like family, member 2 GPR124 0.051 G protein-coupled receptor 124 RTN4RL2 0.051 reticulon 4 receptor-like 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.